!!GENETIC_CODE 1.0 transl_table = 21 This file contains the Trematode Mitochondrial translation table, formatted for use with GCG programs. The table names amino acids in both one and three-letter form and lists the codons which should translate into them. All GCG translation programs may generate their translations from the unambiguous codons in this table. Codons which are all lower case are start codons. Systematic Range: Trematoda: Ohama, T, S. Osawa, K. Watanabe, T.H. Jukes, 1990. J. Molec Evol. 30: 329-332. Differences from the Standard Code: Code 21 Standard ATA Met M Ile I AAA Asn N Lys K AGA Ser S Arg R AGG Ser S Arg R TGA Trp W Ter * gtg Val V The Trematode Mitochondrial Code Symbol 3-letter Codons ! IUPAC .. A Ala GCT GCC GCA GCG ! GCX B Asx ! RAY C Cys TGT TGC ! TGY D Asp GAT GAC ! GAY E Glu GAA GAG ! GAR F Phe TTT TTC ! TTY G Gly GGT GGC GGA GGG ! GGX H His CAT CAC ! CAY I Ile ATT ATC ! ATY J ??? ... ! ... K Lys AAG ! AAG L Leu TTG TTA CTT CTC CTA CTG ! TTR CTX YTR M Met atg ATA ! ATR N Asn AAT AAC AAA ! AAH O ??? ... ! ... P Pro CCT CCC CCA CCG ! CCX Q Gln CAA CAG ! CAR R Arg CGT CGC CGA CGG ! CGX S Ser TCT TCC TCA TCG AGT AGC AGA AGG ! TCX AGX T Thr ACT ACC ACA ACG ! ACX U ??? ... ! ... V Val GTT GTC GTA gtg ! GTX W Trp TGA TGG ! TGR X Xxx ! XXX Y Tyr TAT TAC ! TAY Z Glx ! SAR . ... ... ! ... * End TAA TAG ! TAR