!!GENETIC_CODE 1.0
transl_table = 23
  This file contains the Thraustochytrium aureum Mitochondrial 
translation table, formatted for use with GCG programs. It names
amino acids in both one and three-letter form and lists the codons
and lists the codons which should translate into them.  All GCG 
translation programs may generate their translations from the 
unambiguous codons in this table.
  Codons which are all lower case are start codons.

Systematic Range:

This code has been created for the mitochondrial genome of the
labyrinthulid Thraustochytrium aureum sequenced by the The Organelle
Genome Megasequencing Program (OGMP).

                Differences from the Standard Code:

                          Code 23     Standard

                 TTA      Ter  *        Leu  L

                 The Thraustochytrium Mitochondrial Code

Symbol   3-letter    Codons                    ! IUPAC     ..

 A        Ala         GCT GCC GCA GCG           ! GCX
 B        Asx                                   ! RAY 
 C        Cys         TGT TGC                   ! TGY
 D        Asp         GAT GAC                   ! GAY
 E        Glu         GAA GAG                   ! GAR
 F        Phe         TTT TTC                   ! TTY
 G        Gly         GGT GGC GGA GGG           ! GGX
 H        His         CAT CAC                   ! CAY
 I        Ile         att ATC ATA               ! ATH
 J        ???         ...                       ! ...
 K        Lys         AAA AAG                   ! AAR
 L        Leu         TTG CTT CTC CTA CTG       ! TTG CTX YTG
 M        Met         atg                       ! ATG
 N        Asn         AAT AAC                   ! AAY
 O        ???         ...                       ! ...
 P        Pro         CCT CCC CCA CCG           ! CCX
 Q        Gln         CAA CAG                   ! CAR
 R        Arg         CGT CGC CGA CGG AGA AGG   ! CGX AGR MGR    
 S        Ser         TCT TCC TCA TCG AGT AGC   ! TCX AGY       
 T        Thr         ACT ACC ACA ACG           ! ACX
 U        ???         ...                       ! ...
 V        Val         GTT GTC GTA gtg           ! GTX
 W        Trp         TGG                       ! TGG
 X        Xxx                                   ! XXX
 Y        Tyr         TAT TAC                   ! TAY
 Z        Glx                                   ! SAR
 .        ...         ...                       ! ...
 *        End         TAA TAG TGA TTA           ! TAR TDA