Universal Rifampicin Resistance Cassette
(Standard template in strain TT23430)
Sequence of universal rifR cassette template.
Made by exact replacement of camR coding region of uni-cmr-cassette
with the coding region of gene arr-2, encoding rifampicin resistance.
Use strain TT23430 as template for this cassette.
UL1 1 21
promoter 214 240
potential msg start 247
arr-2 (rifR) 307 759
UR1 997 1017
1 CACCAAACAC CCCCCAAAAC CAAGCCACTG GAGCACCTCA AAAACACCAT
51 CATACACTAA ATCAGTAAGT TGGCAGCATC ACCCGACGCA CTTTGCGCCG
101 AATAAATACC TGTGACGGAA GATCACTTCG CAGAATAAAT AAATCCTGGT
151 GTCCCTGTTG ATACCGGGAA GCCCTGGGCC AACTTTTGGC GAAAATGAGA
201 CGTTGATCGG CACGTAAGAG GTTCCAACTT TCACCATAAT GAAATAAGAT
251 CACTACCGGG CGTATTTTTT GAGTTATCGA GATTTTCAGG AGCTAAGGAA
301 GCTAAAATGG TAAAAGATTG GATTCCCATC TCTCATGATA ATTACAAGCA
351 GGTGCAAGGA CCGTTCTATC ATGGAACCAA AGCCAATTTG GCGATTGGTG
401 ACTTGCTAAC CACAGGGTTC ATCTCTCATT TCGAGGACGG TCGTATTCTT
451 AAGCACATCT ACTTTTCAGC CTTGATGGAG CCAGCAGTTT GGGGAGCTGA
501 ACTTGCTATG TCACTGTCTG GCCTCGAGGG TCGCGGCTAC ATATACATAG
551 TTGAGCCAAC AGGACCGTTC GAAGACGATC CGAATCTTAC GAACAAAAAA
601 TTTCCCGGTA ATCCAACACA GTCCTATAGA ACCTGCGAAC CCTTGAGAAT
651 TGTTGGCGTT GTTGAAGACT GGGAGGGGCA TCCTGTTGAA TTAATAAGGG
701 GAATGTTGGA TTCGTTAGAG GACTTAAAGC GCCGTGGTTT ACACGTCATT
751 GAAGACTAGT TTTTTTAAGG CAGTTATTGG TGCCCTTAAA CGCCTGGTGC
801 TACGCCTGAA TAAGTGATAA TAAGCGGATG AATGGCAGAA ATTCGAAAGC
851 AAATTCGACC CGGTCGTCGG TTCAGGGCAG GGTCGTTAAA TAGCCGCTTA
901 TGTCTATTGC TGGTTTACCG GTTTATTGAC TACCGGAAGC AGTGTGACCG
951 TGTGCTTCTC AAATGCCTGA GGCCAGTTTG CTCAGGCTCT CCCCGTGTGG
1001 TGTGGTGTGG TTGTGTG
Last Update: Thursday, 12-Dec-2024 00:54:38 UTC
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Eric Kofoid
eckofoid at ucdavis.edu