!!AA_SCORING_MATRIX_RECT 1.0
Secretory signal peptide weight matrix for amino acids in eukaryote secretory
signal peptides.
From Nielsen, Henrik, Jacob Engelbrecht, Soren Brunak and Gunnar von Heijne:
Identification of prokaryotic and eukaryotic signal peptides and prediction
of their cleavage sites. To appear, Protein Engineering, 10(1), 1997.
Row 1 represents residue -13, 2 is -12, etc. up to residue +2.
Column 1 is A, column 2 is C, etc. There are 20 columns, one for
each amino acid.

A  C  D  E  F  G  H  I  K  L  M  N  P  Q  R  S  T  V  W  Y ..
0.313 0.283 -2.654 -3.599 0.797 -0.315 -1.082 0.780 -2.078 1.172 -0.068 -2.586 -0.661 -2.326 -1.581 -0.135 -0.341 0.689 0.278 -0.084
0.416 0.165 -3.347 -2.906 0.684 -0.800 -1.593 0.695 -3.464 1.311 -0.618 -1.893 -1.231 -1.633 -2.140 -0.328 -0.144 0.790 0.070 -1.819
0.361 0.225 -2.248 -2.213 0.862 -0.720 -1.306 0.897 -3.464 1.227 -0.282 -1.893 -0.963 -2.039 -2.140 -0.489 -0.406 0.814 0.501 -1.125
0.303 0.133 -3.347 -1.990 0.874 -0.452 -1.999 0.567 -2.771 1.350 -0.382 -1.488 -1.599 -1.228 -2.834 -0.394 -0.170 0.575 -0.097 -0.720
0.760 0.437 -2.248 -2.213 0.654 -0.395 -1.306 0.441 -23.026 1.199 -0.929 -1.333 -1.311 -1.027 -2.428 -0.004 -0.170 0.565 -0.298 -1.125
0.550 0.889 -2.654 -1.807 0.540 -0.066 -0.389 0.441 -2.366 1.039 0.075 -1.333 -1.231 -0.480 -1.581 0.152 0.085 0.425 0.070 -0.971
0.371 0.742 -1.961 -1.034 1.001 -0.289 -0.053 0.340 -2.366 1.051 -0.331 -1.200 -0.618 -0.535 -1.329 0.026 -0.069 0.340 0.683 -0.615
0.702 0.363 -1.738 -1.402 0.684 -0.611 -0.746 0.724 -2.366 0.877 -0.929 -1.333 0.298 -0.860 -1.735 0.011 -0.252 0.830 0.550 -1.125
0.681 0.100 -0.128 -0.267 -0.302 0.704 0.444 -0.419 -0.468 -0.172 -1.717 -0.061 0.789 0.582 -0.000 0.584 0.441 0.065 0.070 -0.838
0.371 0.225 -0.708 -0.303 0.006 0.850 -0.207 0.251 -0.520 0.233 -0.842 -0.640 0.508 0.264 0.111 0.396 0.441 0.247 0.070 0.027
1.251 0.918 -1.961 -1.653 -1.575 0.326 -1.082 0.204 -1.518 -0.583 -1.129 -1.082 -1.850 -1.815 -1.917 0.777 0.828 1.222 -1.802 -2.224
0.080 -0.256 0.437 0.590 0.308 -0.341 1.278 -0.620 -0.286 0.349 -0.687 0.332 -0.963 0.852 0.499 0.540 -0.023 -0.223 1.002 0.341
1.825 0.611 -1.555 -1.807 -1.729 1.237 -1.999 -2.124 -2.078 -1.713 -2.228 -1.082 -0.500 -0.717 -0.531 0.770 -0.046 -1.950 -1.802 -2.224
0.647 -0.166 0.872 0.923 0.006 -0.027 0.444 0.101 0.487 -0.663 -0.687 -0.021 -1.398 1.480 -0.030 0.332 -0.144 -0.118 -0.298 0.127
-0.295 -0.005 0.843 0.878 -0.188 0.065 0.399 0.016 0.225 -0.825 -0.842 0.691 1.316 0.313 0.162 0.299 0.236 -0.004 -0.703 0.218