LOCUS XX_000096 4719448 bp DNA circular CON 15-JUL-2017 DEFINITION Escherichia coli str. K-12 substr. FC40, complete genome plus plasmid F'128(FC40)del(lac-dinB) ACCESSION U00096 VERSION U00096.3 GI:545778205 DBLINK BioProject: PRJNA225 KEYWORDS RefSeq. SOURCE Escherichia coli str. K-12 substr. MG1655 ORGANISM Escherichia coli str. K-12 substr. MG1655 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. COMMENT Assembled by Eric Kofoid from U00096 and F'128(FC40) sequences' 3 chromosomal deletions were made, 1 deletion in F'128(FC40), and numerous SNPs and short indels corrected. FEATURES Location/Qualifiers source 1..4719446 /organism="Escherichia coli str. K-12 substr. FC40 plus plasmid F'128(FC40)del(lac-dinB)" /mol_type="genomic DNA" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:511145" gene 190..255 /gene="thrL" /locus_tag="b0001" /gene_synonym="ECK0001" /gene_synonym="JW4367" /db_xref="EcoGene:EG11277" CDS 190..255 /gene="thrL" /locus_tag="b0001" /gene_synonym="ECK0001" /gene_synonym="JW4367" /function="leader; Amino acid biosynthesis: Threonine" /note="GO_process: GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="thr operon leader peptide" /protein_id="AAC73112.1" /db_xref="GI:1786182" /db_xref="ASAP:ABE-0000006" /db_xref="UniProtKB/Swiss-Prot:P0AD86" /db_xref="EcoGene:EG11277" /translation="MKRISTTITTTITITTGNGAG" gene 337..2799 /gene="thrA" /locus_tag="b0002" /gene_synonym="ECK0002" /gene_synonym="Hs" /gene_synonym="JW0001" /gene_synonym="thrA1" /gene_synonym="thrA2" /gene_synonym="thrD" /db_xref="EcoGene:EG10998" CDS 337..2799 /gene="thrA" /locus_tag="b0002" /gene_synonym="ECK0002" /gene_synonym="Hs" /gene_synonym="JW0001" /gene_synonym="thrA1" /gene_synonym="thrA2" /gene_synonym="thrD" /EC_number="1.1.1.3" /EC_number="2.7.2.4" /function="enzyme; Amino acid biosynthesis: Threonine" /experiment="N-terminus verified by Edman degradation: PMID 354697,4562989" /note="bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009088 - threonine biosynthetic process; GO_process: GO:0009086 - methionine biosynthetic process; GO_process: GO:0009090 - homoserine biosynthetic process" /codon_start=1 /transl_table=11 /product="Bifunctional aspartokinase/homoserine dehydrogenase 1" /protein_id="AAC73113.1" /db_xref="GI:1786183" /db_xref="ASAP:ABE-0000008" /db_xref="UniProtKB/Swiss-Prot:P00561" /db_xref="EcoGene:EG10998" /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG NDVTAAGVFADLLRTLSWKLGV" gene 2801..3733 /gene="thrB" /locus_tag="b0003" /gene_synonym="ECK0003" /gene_synonym="JW0002" /db_xref="EcoGene:EG10999" CDS 2801..3733 /gene="thrB" /locus_tag="b0003" /gene_synonym="ECK0003" /gene_synonym="JW0002" /EC_number="2.7.1.39" /function="enzyme; Amino acid biosynthesis: Threonine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="AAC73114.1" /db_xref="GI:1786184" /db_xref="ASAP:ABE-0000010" /db_xref="UniProtKB/Swiss-Prot:P00547" /db_xref="EcoGene:EG10999" /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPETA QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN" gene 3734..5020 /gene="thrC" /locus_tag="b0004" /gene_synonym="ECK0004" /gene_synonym="JW0003" /db_xref="EcoGene:EG11000" CDS 3734..5020 /gene="thrC" /locus_tag="b0004" /gene_synonym="ECK0004" /gene_synonym="JW0003" /EC_number="4.2.3.1" /function="enzyme; Amino acid biosynthesis: Threonine" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="L-threonine synthase" /protein_id="AAC73115.1" /db_xref="GI:1786185" /db_xref="ASAP:ABE-0000012" /db_xref="UniProtKB/Swiss-Prot:P00934" /db_xref="EcoGene:EG11000" /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR LLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ" gene 5234..5530 /gene="yaaX" /locus_tag="b0005" /gene_synonym="ECK0005" /gene_synonym="JW0004" /db_xref="EcoGene:EG14384" CDS 5234..5530 /gene="yaaX" /locus_tag="b0005" /gene_synonym="ECK0005" /gene_synonym="JW0004" /codon_start=1 /transl_table=11 /product="DUF2502 family putative periplasmic protein" /protein_id="AAC73116.1" /db_xref="GI:1786186" /db_xref="ASAP:ABE-0000015" /db_xref="UniProtKB/Swiss-Prot:P75616" /db_xref="EcoGene:EG14384" /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY YWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR" repeat_region 5565..5669 /note="RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(5683..6459) /gene="yaaA" /locus_tag="b0006" /gene_synonym="ECK0006" /gene_synonym="JW0005" /db_xref="EcoGene:EG10011" CDS complement(5683..6459) /gene="yaaA" /locus_tag="b0006" /gene_synonym="ECK0006" /gene_synonym="JW0005" /codon_start=1 /transl_table=11 /product="peroxide resistance protein, lowers intracellular iron" /protein_id="AAC73117.1" /db_xref="GI:1786187" /db_xref="ASAP:ABE-0000018" /db_xref="UniProtKB/Swiss-Prot:P0A8I3" /db_xref="EcoGene:EG10011" /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR" gene complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" /gene_synonym="ECK0007" /gene_synonym="JW0006" /db_xref="EcoGene:EG11555" CDS complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" /gene_synonym="ECK0007" /gene_synonym="JW0006" /function="putative transport; Transport of small molecules: Amino acids, amines" /note="inner membrane transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73118.1" /db_xref="GI:1786188" /db_xref="ASAP:ABE-0000020" /db_xref="UniProtKB/Swiss-Prot:P30143" /db_xref="EcoGene:EG11555" /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIG MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG VQANAVARALSFSFDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLT SLVICVMNIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQ LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRIC TFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR PVFDPLRYPDIGRQLSPDAWDDVSQE" gene 8238..9191 /gene="talB" /locus_tag="b0008" /gene_synonym="ECK0008" /gene_synonym="JW0007" /gene_synonym="yaaK" /db_xref="EcoGene:EG11556" CDS 8238..9191 /gene="talB" /locus_tag="b0008" /gene_synonym="ECK0008" /gene_synonym="JW0007" /gene_synonym="yaaK" /EC_number="2.2.1.2" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="transaldolase B" /protein_id="AAC73119.1" /db_xref="GI:1786189" /db_xref="ASAP:ABE-0000027" /db_xref="UniProtKB/Swiss-Prot:P0A870" /db_xref="EcoGene:EG11556" /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL" gene 9306..9893 /gene="mog" /locus_tag="b0009" /gene_synonym="bisD" /gene_synonym="chlG" /gene_synonym="ECK0009" /gene_synonym="JW0008" /gene_synonym="mogA" /gene_synonym="yaaG" /db_xref="EcoGene:EG11511" CDS 9306..9893 /gene="mog" /locus_tag="b0009" /gene_synonym="bisD" /gene_synonym="chlG" /gene_synonym="ECK0009" /gene_synonym="JW0008" /gene_synonym="mogA" /gene_synonym="yaaG" /function="transport; Biosynthesis of cofactors, carriers: Molybdopterin" /note="putative molybdochetalase in molybdopterine biosynthesis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdochelatase incorporating molybdenum into molybdopterin" /protein_id="AAC73120.1" /db_xref="GI:1786190" /db_xref="ASAP:ABE-0000030" /db_xref="UniProtKB/Swiss-Prot:P0AF03" /db_xref="EcoGene:EG11511" /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE" gene complement(9928..10494) /gene="satP" /locus_tag="b0010" /gene_synonym="ECK0010" /gene_synonym="JW0009" /gene_synonym="yaaH" /db_xref="EcoGene:EG11512" CDS complement(9928..10494) /gene="satP" /locus_tag="b0010" /gene_synonym="ECK0010" /gene_synonym="JW0009" /gene_synonym="yaaH" /codon_start=1 /transl_table=11 /product="succinate-acetate transporter" /protein_id="AAC73121.1" /db_xref="GI:1786191" /db_xref="ASAP:ABE-0000032" /db_xref="UniProtKB/Swiss-Prot:P0AC98" /db_xref="EcoGene:EG11512" /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC GASAIYLAMGEVLNEQFGRTVLPIGESH" gene complement(10643..11356) /gene="yaaW" /locus_tag="b0011" /gene_synonym="ECK0011" /gene_synonym="JW0010" /db_xref="EcoGene:EG14340" CDS complement(10643..11356) /gene="yaaW" /locus_tag="b0011" /gene_synonym="ECK0011" /gene_synonym="JW0010" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="UPF0174 family protein" /protein_id="AAC73122.1" /db_xref="GI:1786193" /db_xref="ASAP:ABE-0000037" /db_xref="UniProtKB/Swiss-Prot:P75617" /db_xref="EcoGene:EG14340" /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT IPAVLQIACLRRMVSATQV" gene complement(11382..11786) /gene="yaaI" /locus_tag="b0013" /gene_synonym="ECK0013" /gene_synonym="JW0012" /db_xref="EcoGene:EG11513" CDS complement(11382..11786) /gene="yaaI" /locus_tag="b0013" /gene_synonym="ECK0013" /gene_synonym="JW0012" /codon_start=1 /transl_table=11 /product="UPF0412 family protein" /protein_id="AAC73124.1" /db_xref="GI:1786195" /db_xref="ASAP:ABE-0000043" /db_xref="UniProtKB/Swiss-Prot:P28696" /db_xref="EcoGene:EG11513" /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLAL KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD" gene 12163..14079 /gene="dnaK" /locus_tag="b0014" /gene_synonym="ECK0014" /gene_synonym="groPAB" /gene_synonym="groPC" /gene_synonym="groPF" /gene_synonym="grpC" /gene_synonym="grpF" /gene_synonym="JW0013" /gene_synonym="seg" /db_xref="EcoGene:EG10241" CDS 12163..14079 /gene="dnaK" /locus_tag="b0014" /gene_synonym="ECK0014" /gene_synonym="groPAB" /gene_synonym="groPC" /gene_synonym="groPF" /gene_synonym="grpC" /gene_synonym="grpF" /gene_synonym="JW0013" /gene_synonym="seg" /function="factor; Chaperones" /note="chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="chaperone Hsp70, with co-chaperone DnaJ" /protein_id="AAC73125.1" /db_xref="GI:1786196" /db_xref="ASAP:ABE-0000052" /db_xref="UniProtKB/Swiss-Prot:P0A6Y8" /db_xref="EcoGene:EG10241" /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD DVVDAEFEEVKDKK" gene 14168..15298 /gene="dnaJ" /locus_tag="b0015" /gene_synonym="ECK0015" /gene_synonym="faa" /gene_synonym="groP" /gene_synonym="grpC" /gene_synonym="JW0014" /db_xref="EcoGene:EG10240" CDS 14168..15298 /gene="dnaJ" /locus_tag="b0015" /gene_synonym="ECK0015" /gene_synonym="faa" /gene_synonym="groP" /gene_synonym="grpC" /gene_synonym="JW0014" /function="factor; Chaperones" /note="chaperone with DnaK; heat shock protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="chaperone Hsp40, DnaK co-chaperone" /protein_id="AAC73126.1" /db_xref="GI:1786197" /db_xref="ASAP:ABE-0000054" /db_xref="UniProtKB/Swiss-Prot:P08622" /db_xref="EcoGene:EG10240" /translation="MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAE AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN ERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR" mobile_element 15387..16731 /mobile_element_type="insertion sequence:IS186A" gene 15445..16557 /gene="insL1" /locus_tag="b0016" /gene_synonym="ECK0016" /db_xref="EcoGene:EG40012" CDS 15445..16557 /gene="insL1" /locus_tag="b0016" /gene_synonym="ECK0016" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS186 transposase" /protein_id="AAC73127.1" /db_xref="GI:1786198" /db_xref="ASAP:ABE-0000058" /db_xref="UniProtKB/Swiss-Prot:P0CF91" /db_xref="EcoGene:EG40012" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(16751..16960) /gene="mokC" /locus_tag="b0018" /gene_synonym="ECK4466" /gene_synonym="gefL" /db_xref="EcoGene:EG12074" CDS complement(16751..16960) /gene="mokC" /locus_tag="b0018" /gene_synonym="ECK4466" /gene_synonym="gefL" /note="regulatory peptide whose translation enables hokC (gef) expression; completely contained in another CDS" /codon_start=1 /transl_table=11 /product="regulatory protein for HokC, overlaps CDS of hokC" /protein_id="AAC73129.1" /db_xref="GI:1786200" /db_xref="ASAP:ABE-0000064" /db_xref="UniProtKB/Swiss-Prot:P33236" /db_xref="EcoGene:EG12074" /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT RKDLCEVHIRTGQTEVAVFTAYESE" gene complement(16751..16903) /gene="hokC" /locus_tag="b4412" /gene_synonym="ECK0018" /gene_synonym="gef" /gene_synonym="JW5879" /db_xref="EcoGene:EG10373" CDS complement(16751..16903) /gene="hokC" /locus_tag="b4412" /gene_synonym="ECK0018" /gene_synonym="gef" /gene_synonym="JW5879" /note="small toxic membrane polypeptide; completely contained in another CDS" /codon_start=1 /transl_table=11 /product="toxic membrane protein, small" /protein_id="AAT48122.1" /db_xref="GI:48994874" /db_xref="ASAP:ABE-0047278" /db_xref="UniProtKB/Swiss-Prot:P0ACG4" /db_xref="EcoGene:EG10373" /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF TAYESE" gene 16952..17006 /gene="sokC" /locus_tag="b4413" /gene_synonym="ECK0019" /gene_synonym="JWR0224" /gene_synonym="sof" /db_xref="EcoGene:EG31128" ncRNA 16952..17006 /ncRNA_class="antisense_RNA" /gene="sokC" /locus_tag="b4413" /gene_synonym="ECK0019" /gene_synonym="JWR0224" /gene_synonym="sof" /product="sRNA antisense regulator blocking mokC, and hence hokC, translation" /note="IS186A interrupts hokC transcript downstream of hokC gene in K-12" /function="component of addiction module" /db_xref="ASAP:ABE-0047238" /db_xref="EcoGene:EG31128" gene 17489..18655 /gene="nhaA" /locus_tag="b0019" /gene_synonym="ant" /gene_synonym="antA" /gene_synonym="ECK0020" /gene_synonym="JW0018" /db_xref="EcoGene:EG10652" CDS 17489..18655 /gene="nhaA" /locus_tag="b0019" /gene_synonym="ant" /gene_synonym="antA" /gene_synonym="ECK0020" /gene_synonym="JW0018" /function="transport; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 8381959" /note="Na+/H antiporter, pH dependent; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009268 - response to pH" /codon_start=1 /transl_table=11 /product="sodium-proton antiporter" /protein_id="AAC73130.1" /db_xref="GI:1786201" /db_xref="ASAP:ABE-0000068" /db_xref="UniProtKB/Swiss-Prot:P13738" /db_xref="EcoGene:EG10652" /translation="MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLET PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTA VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV" gene 18715..19620 /gene="nhaR" /locus_tag="b0020" /gene_synonym="antO" /gene_synonym="ECK0021" /gene_synonym="JW0019" /gene_synonym="yaaB" /db_xref="EcoGene:EG11078" CDS 18715..19620 /gene="nhaR" /locus_tag="b0020" /gene_synonym="antO" /gene_synonym="ECK0021" /gene_synonym="JW0019" /gene_synonym="yaaB" /function="regulator; Transport of small molecules: Cations" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0009268 - response to pH" /codon_start=1 /transl_table=11 /product="transcriptional activator of nhaA" /protein_id="AAC73131.1" /db_xref="GI:1786202" /db_xref="ASAP:ABE-0000072" /db_xref="UniProtKB/Swiss-Prot:P0A9G2" /db_xref="EcoGene:EG11078" /translation="MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRAL EERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVA DALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQE GLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNV EILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAE RMIQHPAVQRICNTDYSALFSPAVR" mobile_element complement(19796..20563) /mobile_element_type="insertion sequence:IS1A" gene complement(19811..20314) /gene="insB1" /locus_tag="b0021" /gene_synonym="ECK0022" /db_xref="EcoGene:EG40002" CDS complement(19811..20314) /gene="insB1" /locus_tag="b0021" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="AAC73132.1" /db_xref="GI:1786203" /db_xref="ASAP:ABE-0000075" /db_xref="UniProtKB/Swiss-Prot:P0CF25" /db_xref="EcoGene:EG40002" /translation="MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(20233..20508) /gene="insA" /locus_tag="b0022" /gene_synonym="ECK0023" /note="insA1" /db_xref="EcoGene:EG40001" CDS complement(20233..20508) /gene="insA" /locus_tag="b0022" /gene_synonym="ECK0023" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="AAC73133.1" /db_xref="GI:1786204" /db_xref="ASAP:ABE-0000078" /db_xref="UniProtKB/Swiss-Prot:P0CF07" /db_xref="EcoGene:EG40001" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR" gene complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /gene_synonym="ECK0024" /gene_synonym="JW0022" /gene_synonym="sup" /db_xref="EcoGene:EG10919" CDS complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /gene_synonym="ECK0024" /gene_synonym="JW0022" /gene_synonym="sup" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S20" /protein_id="AAC73134.1" /db_xref="GI:1786206" /db_xref="ASAP:ABE-0000082" /db_xref="UniProtKB/Swiss-Prot:P0A7U7" /db_xref="EcoGene:EG10919" /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA" gene 21181..21399 /gene="yaaY" /locus_tag="b0024" /gene_synonym="ECK0025" /gene_synonym="JW5003" /db_xref="EcoGene:EG14386" CDS 21181..21399 /gene="yaaY" /locus_tag="b0024" /gene_synonym="ECK0025" /gene_synonym="JW5003" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC73135.1" /db_xref="GI:1786207" /db_xref="ASAP:ABE-0000089" /db_xref="UniProtKB/Swiss-Prot:P75620" /db_xref="EcoGene:EG14386" /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMK SHFFLISVLNRRLTLTAVQGILGRFSLF" gene 21407..22348 /gene="ribF" /locus_tag="b0025" /gene_synonym="ECK0026" /gene_synonym="JW0023" /gene_synonym="yaaC" /db_xref="EcoGene:EG11079" CDS 21407..22348 /gene="ribF" /locus_tag="b0025" /gene_synonym="ECK0026" /gene_synonym="JW0023" /gene_synonym="yaaC" /EC_number="2.7.1.26" /EC_number="2.7.7.2" /function="putative regulator; Not classified" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="bifunctional riboflavin kinase/FAD synthetase" /protein_id="AAC73136.1" /db_xref="GI:1786208" /db_xref="ASAP:ABE-0000091" /db_xref="UniProtKB/Swiss-Prot:P0AG40" /db_xref="EcoGene:EG11079" /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA" gene 22391..25207 /gene="ileS" /locus_tag="b0026" /gene_synonym="ECK0027" /gene_synonym="ilvS" /gene_synonym="JW0024" /db_xref="EcoGene:EG10492" CDS 22391..25207 /gene="ileS" /locus_tag="b0026" /gene_synonym="ECK0027" /gene_synonym="ilvS" /gene_synonym="JW0024" /EC_number="6.1.1.5" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="isoleucine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="AAC73137.1" /db_xref="GI:2367096" /db_xref="ASAP:ABE-0000094" /db_xref="UniProtKB/Swiss-Prot:P00956" /db_xref="EcoGene:EG10492" /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALG DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV AEHAEICGRCVSNVAGDGEKRKFA" gene 25207..25701 /gene="lspA" /locus_tag="b0027" /gene_synonym="ECK0028" /gene_synonym="JW0025" /db_xref="EcoGene:EG10548" CDS 25207..25701 /gene="lspA" /locus_tag="b0027" /gene_synonym="ECK0028" /gene_synonym="JW0025" /EC_number="3.4.23.36" /function="enzyme; Protein, peptide secretion" /note="prolipoprotein signal peptidase (SPase II); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="prolipoprotein signal peptidase (signal peptidase II)" /protein_id="AAC73138.1" /db_xref="GI:1786210" /db_xref="ASAP:ABE-0000096" /db_xref="UniProtKB/Swiss-Prot:P00804" /db_xref="EcoGene:EG10548" /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR AKKQ" repeat_region 25710..25795 /note="REP2 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 25826..26275 /gene="fkpB" /locus_tag="b0028" /gene_synonym="ECK0029" /gene_synonym="JW0026" /gene_synonym="slpA" /gene_synonym="yaaD" /db_xref="EcoGene:EG11080" CDS 25826..26275 /gene="fkpB" /locus_tag="b0028" /gene_synonym="ECK0029" /gene_synonym="JW0026" /gene_synonym="slpA" /gene_synonym="yaaD" /EC_number="5.2.1.8" /function="putative enzyme; Proteins - translation and modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" /protein_id="AAC73139.1" /db_xref="GI:1786211" /db_xref="ASAP:ABE-0000101" /db_xref="UniProtKB/Swiss-Prot:P0AEM0" /db_xref="EcoGene:EG11080" /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA" gene 26277..27227 /gene="ispH" /locus_tag="b0029" /gene_synonym="ECK0030" /gene_synonym="JW0027" /gene_synonym="lytB" /gene_synonym="yaaE" /db_xref="EcoGene:EG11081" CDS 26277..27227 /gene="ispH" /locus_tag="b0029" /gene_synonym="ECK0030" /gene_synonym="JW0027" /gene_synonym="lytB" /gene_synonym="yaaE" /EC_number="1.17.1.2" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein" /protein_id="AAC73140.1" /db_xref="GI:1786212" /db_xref="ASAP:ABE-0000103" /db_xref="UniProtKB/Swiss-Prot:P62623" /db_xref="EcoGene:EG11081" /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD" gene 27293..28207 /gene="rihC" /locus_tag="b0030" /gene_synonym="ECK0031" /gene_synonym="JW0028" /gene_synonym="yaaF" /db_xref="EcoGene:EG11082" CDS 27293..28207 /gene="rihC" /locus_tag="b0030" /gene_synonym="ECK0031" /gene_synonym="JW0028" /gene_synonym="yaaF" /EC_number="3.2.2.-" /note="GO_process: GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="ribonucleoside hydrolase 3" /protein_id="AAC73141.1" /db_xref="GI:1786213" /db_xref="ASAP:ABE-0000109" /db_xref="UniProtKB/Swiss-Prot:P22564" /db_xref="EcoGene:EG11082" /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALF SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG KPANVQVALDLDVKGFQQWVAEVLALAS" gene 28374..29195 /gene="dapB" /locus_tag="b0031" /gene_synonym="ECK0032" /gene_synonym="JW0029" /db_xref="EcoGene:EG10206" CDS 28374..29195 /gene="dapB" /locus_tag="b0031" /gene_synonym="ECK0032" /gene_synonym="JW0029" /EC_number="1.17.1.8" /function="enzyme; Amino acid biosynthesis: Lysine" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="AAC73142.1" /db_xref="GI:1786214" /db_xref="ASAP:ABE-0000112" /db_xref="UniProtKB/Swiss-Prot:P04036" /db_xref="EcoGene:EG10206" /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL" gene 29651..30799 /gene="carA" /locus_tag="b0032" /gene_synonym="arg" /gene_synonym="cap" /gene_synonym="ECK0033" /gene_synonym="JW0030" /gene_synonym="pyrA" /db_xref="EcoGene:EG10134" CDS 29651..30799 /gene="carA" /locus_tag="b0032" /gene_synonym="arg" /gene_synonym="cap" /gene_synonym="ECK0033" /gene_synonym="JW0030" /gene_synonym="pyrA" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3894020,9298646,9740056" /note="GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate synthetase small subunit, glutamine amidotransferase" /protein_id="AAC73143.1" /db_xref="GI:1786215" /db_xref="ASAP:ABE-0000118" /db_xref="UniProtKB/Swiss-Prot:P0A6F1" /db_xref="EcoGene:EG10134" /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK" gene 30817..34038 /gene="carB" /locus_tag="b0033" /gene_synonym="cap" /gene_synonym="ECK0034" /gene_synonym="JW0031" /gene_synonym="pyrA" /db_xref="EcoGene:EG10135" CDS 30817..34038 /gene="carB" /locus_tag="b0033" /gene_synonym="cap" /gene_synonym="ECK0034" /gene_synonym="JW0031" /gene_synonym="pyrA" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="AAC73144.1" /db_xref="GI:1786216" /db_xref="ASAP:ABE-0000121" /db_xref="UniProtKB/Swiss-Prot:P00968" /db_xref="EcoGene:EG10135" /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVD GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGV REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK" gene 34300..34695 /gene="caiF" /locus_tag="b0034" /gene_synonym="ECK0035" /gene_synonym="JW0033" /db_xref="EcoGene:EG13451" CDS 34300..34695 /gene="caiF" /locus_tag="b0034" /gene_synonym="ECK0035" /gene_synonym="JW0033" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="transcriptional regulator of cai operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cai operon transcriptional activator" /protein_id="AAC73145.2" /db_xref="GI:87081680" /db_xref="ASAP:ABE-0000125" /db_xref="UniProtKB/Swiss-Prot:P0AE58" /db_xref="EcoGene:EG13451" /translation="MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNT LTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVR KTPRIPAVPLTELNREQKWQMMLSKSMRR" repeat_region 34727..34762 /note="REP3 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(34781..35371) /gene="caiE" /locus_tag="b0035" /gene_synonym="ECK0036" /gene_synonym="JW5004" /db_xref="EcoGene:EG12608" CDS complement(34781..35371) /gene="caiE" /locus_tag="b0035" /gene_synonym="ECK0036" /gene_synonym="JW5004" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="possible synthesis of cofactor for carnitine racemase and dehydratase; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0042413 - carnitine catabolic process" /codon_start=1 /transl_table=11 /product="stimulator of CaiD and CaiB enzyme activities" /protein_id="AAC73146.2" /db_xref="GI:87081681" /db_xref="ASAP:ABE-0000128" /db_xref="UniProtKB/Swiss-Prot:P39206" /db_xref="EcoGene:EG12608" /translation="MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLR GDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSV IMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQ DLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR" gene complement(35377..36162) /gene="caiD" /locus_tag="b0036" /gene_synonym="ECK0037" /gene_synonym="JW0035" /gene_synonym="yaaL" /db_xref="EcoGene:EG11557" CDS complement(35377..36162) /gene="caiD" /locus_tag="b0036" /gene_synonym="ECK0037" /gene_synonym="JW0035" /gene_synonym="yaaL" /EC_number="4.2.1.-" /function="enzyme; Degradation of small molecules: Amines" /note="carnitine racemase; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0042413 - carnitine catabolic process" /codon_start=1 /transl_table=11 /product="carnitinyl-CoA dehydratase" /protein_id="AAC73147.2" /db_xref="GI:221142681" /db_xref="ASAP:ABE-0000130" /db_xref="UniProtKB/Swiss-Prot:P31551" /db_xref="EcoGene:EG11557" /translation="MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDD PQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVN GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVM TGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMP VEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR" gene complement(36271..37824) /gene="caiC" /locus_tag="b0037" /gene_synonym="ECK0038" /gene_synonym="JW0036" /gene_synonym="yaaM" /db_xref="EcoGene:EG11558" CDS complement(36271..37824) /gene="caiC" /locus_tag="b0037" /gene_synonym="ECK0038" /gene_synonym="JW0036" /gene_synonym="yaaM" /EC_number="6.3.2.-" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="probable crotonobetaine/carnitine-CoA ligase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="putative crotonobetaine/carnitine-CoA ligase" /protein_id="AAC73148.2" /db_xref="GI:221142682" /db_xref="ASAP:ABE-0000133" /db_xref="UniProtKB/Swiss-Prot:P31552" /db_xref="EcoGene:EG11558" /translation="MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELN QEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESA WILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQ PATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYL TVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTL MVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPG DKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAK VLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIV VVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCS GKIIRKNLK" gene complement(37898..39115) /gene="caiB" /locus_tag="b0038" /gene_synonym="ECK0039" /gene_synonym="JW0037" /gene_synonym="yaaN" /db_xref="EcoGene:EG11559" CDS complement(37898..39115) /gene="caiB" /locus_tag="b0038" /gene_synonym="ECK0039" /gene_synonym="JW0037" /gene_synonym="yaaN" /EC_number="2.8.3.-" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 8188598,10209289" /note="l-carnitine dehydratase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042413 - carnitine catabolic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="crotonobetainyl CoA:carnitine CoA transferase" /protein_id="AAC73149.1" /db_xref="GI:1786222" /db_xref="ASAP:ABE-0000136" /db_xref="UniProtKB/Swiss-Prot:P31572" /db_xref="EcoGene:EG11559" /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE GTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQY VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI QELVSKGLAKVED" repeat_region 39151..39232 /note="REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(39244..40386) /gene="caiA" /locus_tag="b0039" /gene_synonym="ECK0040" /gene_synonym="JW0038" /gene_synonym="yaaO" /db_xref="EcoGene:EG11560" CDS complement(39244..40386) /gene="caiA" /locus_tag="b0039" /gene_synonym="ECK0040" /gene_synonym="JW0038" /gene_synonym="yaaO" /EC_number="1.3.99.-" /function="putative regulator; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 10209289" /note="probable carnitine operon oxidoreductase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006097 - glyoxylate cycle; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0042413 - carnitine catabolic process" /codon_start=1 /transl_table=11 /product="crotonobetaine reductase subunit II, FAD-binding" /protein_id="AAC73150.1" /db_xref="GI:1786223" /db_xref="ASAP:ABE-0000139" /db_xref="UniProtKB/Swiss-Prot:P60584" /db_xref="EcoGene:EG11560" /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR" gene complement(40417..41931) /gene="caiT" /locus_tag="b0040" /gene_synonym="ECK0041" /gene_synonym="JW0039" /gene_synonym="yaaP" /db_xref="EcoGene:EG11561" CDS complement(40417..41931) /gene="caiT" /locus_tag="b0040" /gene_synonym="ECK0041" /gene_synonym="JW0039" /gene_synonym="yaaP" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /note="probable carnitine transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73151.1" /db_xref="GI:1786224" /db_xref="ASAP:ABE-0000141" /db_xref="UniProtKB/Swiss-Prot:P31553" /db_xref="EcoGene:EG11561" /translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF FFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVAR AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD" gene 42403..43173 /gene="fixA" /locus_tag="b0041" /gene_synonym="ECK0042" /gene_synonym="JW0040" /gene_synonym="yaaQ" /db_xref="EcoGene:EG11562" CDS 42403..43173 /gene="fixA" /locus_tag="b0041" /gene_synonym="ECK0042" /gene_synonym="JW0040" /gene_synonym="yaaQ" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="probable flavoprotein subunit, carnitine metabolism; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="anaerobic carnitine reduction putative electron transfer flavoprotein subunit" /protein_id="AAC73152.2" /db_xref="GI:87081682" /db_xref="ASAP:ABE-0000145" /db_xref="UniProtKB/Swiss-Prot:P60566" /db_xref="EcoGene:EG11562" /translation="MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEA ACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTAS ALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVE RELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAA WSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI" gene 43188..44129 /gene="fixB" /locus_tag="b0042" /gene_synonym="ECK0043" /gene_synonym="JW0041" /gene_synonym="yaaR" /db_xref="EcoGene:EG11563" CDS 43188..44129 /gene="fixB" /locus_tag="b0042" /gene_synonym="ECK0043" /gene_synonym="JW0041" /gene_synonym="yaaR" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="probable flavoprotein subunit, carnitine metabolism; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein" /protein_id="AAC73153.1" /db_xref="GI:1786226" /db_xref="ASAP:ABE-0000147" /db_xref="UniProtKB/Swiss-Prot:P31574" /db_xref="EcoGene:EG11563" /translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQA IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT IFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR" gene 44180..45466 /gene="fixC" /locus_tag="b0043" /gene_synonym="ECK0044" /gene_synonym="JW0042" /gene_synonym="yaaS" /db_xref="EcoGene:EG11564" CDS 44180..45466 /gene="fixC" /locus_tag="b0043" /gene_synonym="ECK0044" /gene_synonym="JW0042" /gene_synonym="yaaS" /function="putative carrier; Energy metabolism, carbon: Electron transport" /note="flavoprotein; electron transport; GO_process: GO:0042413 - carnitine catabolic process" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC73154.1" /db_xref="GI:1786227" /db_xref="ASAP:ABE-0000149" /db_xref="UniProtKB/Swiss-Prot:P68644" /db_xref="EcoGene:EG11564" /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFT IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL" gene 45463..45750 /gene="fixX" /locus_tag="b0044" /gene_synonym="ECK0045" /gene_synonym="JW0043" /gene_synonym="yaaT" /db_xref="EcoGene:EG11565" CDS 45463..45750 /gene="fixX" /locus_tag="b0044" /gene_synonym="ECK0045" /gene_synonym="JW0043" /gene_synonym="yaaT" /function="putative carrier; Not classified" /note="putative ferredoxin; GO_process: GO:0042413 - carnitine catabolic process" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S ferredoxin-type protein" /protein_id="AAC73155.1" /db_xref="GI:1786228" /db_xref="ASAP:ABE-0000151" /db_xref="UniProtKB/Swiss-Prot:P68646" /db_xref="EcoGene:EG11565" /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACP AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG" gene 45807..47138 /gene="yaaU" /locus_tag="b0045" /gene_synonym="ECK0046" /gene_synonym="JW0044" /gene_synonym="yabE" /db_xref="EcoGene:EG11566" CDS 45807..47138 /gene="yaaU" /locus_tag="b0045" /gene_synonym="ECK0046" /gene_synonym="JW0044" /gene_synonym="yabE" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS sugar transporter; membrane protein" /protein_id="AAC73156.1" /db_xref="GI:1786229" /db_xref="ASAP:ABE-0000156" /db_xref="UniProtKB/Swiss-Prot:P31679" /db_xref="EcoGene:EG11566" /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMF VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLG VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG" gene 47246..47776 /gene="kefF" /locus_tag="b0046" /gene_synonym="ECK0047" /gene_synonym="JW0045" /gene_synonym="yabF" /db_xref="EcoGene:EG11568" CDS 47246..47776 /gene="kefF" /locus_tag="b0046" /gene_synonym="ECK0047" /gene_synonym="JW0045" /gene_synonym="yabF" /function="putative enzyme; Not classified" /note="putative NAD(P)H oxidoreductase" /codon_start=1 /transl_table=11 /product="potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent" /protein_id="AAC73157.1" /db_xref="GI:1786231" /db_xref="ASAP:ABE-0000159" /db_xref="UniProtKB/Swiss-Prot:P0A754" /db_xref="EcoGene:EG11568" /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLW AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA RHYKQRLLEWQEAHHG" gene 47769..49631 /gene="kefC" /locus_tag="b0047" /gene_synonym="ECK0048" /gene_synonym="JW0046" /gene_synonym="trkC" /db_xref="EcoGene:EG10521" CDS 47769..49631 /gene="kefC" /locus_tag="b0047" /gene_synonym="ECK0048" /gene_synonym="JW0046" /gene_synonym="trkC" /function="transport; Transport of small molecules: Cations" /note="K+ efflux antiporter, glutathione-regulated; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015386 - potassium:hydrogen antiporter activity" /codon_start=1 /transl_table=11 /product="potassium:proton antiporter" /protein_id="AAC73158.1" /db_xref="GI:1786232" /db_xref="ASAP:ABE-0000161" /db_xref="UniProtKB/Swiss-Prot:P03819" /db_xref="EcoGene:EG10521" /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGCGALQMVICGGLLG LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS" gene 49823..50302 /gene="folA" /locus_tag="b0048" /gene_synonym="ECK0049" /gene_synonym="JW0047" /gene_synonym="tmrA" /db_xref="EcoGene:EG10326" CDS 49823..50302 /gene="folA" /locus_tag="b0048" /gene_synonym="ECK0049" /gene_synonym="JW0047" /gene_synonym="tmrA" /EC_number="1.5.1.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 350268,4610415" /note="dihydrofolate reductase type I; trimethoprim resistance; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase" /protein_id="AAC73159.1" /db_xref="GI:1786233" /db_xref="ASAP:ABE-0000164" /db_xref="UniProtKB/Swiss-Prot:P0ABQ4" /db_xref="EcoGene:EG10326" /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR" repeat_region 50327..50363 /note="REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(50380..51222) /gene="apaH" /locus_tag="b0049" /gene_synonym="cfcB" /gene_synonym="ECK0050" /gene_synonym="JW0048" /db_xref="EcoGene:EG10048" CDS complement(50380..51222) /gene="apaH" /locus_tag="b0049" /gene_synonym="cfcB" /gene_synonym="ECK0050" /gene_synonym="JW0048" /EC_number="3.6.1.41" /function="enzyme; Salvage of nucleosides and nucleotides" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="diadenosine tetraphosphatase" /protein_id="AAC73160.1" /db_xref="GI:1786234" /db_xref="ASAP:ABE-0000167" /db_xref="UniProtKB/Swiss-Prot:P05637" /db_xref="EcoGene:EG10048" /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE AAAS" gene complement(51229..51606) /gene="apaG" /locus_tag="b0050" /gene_synonym="corD" /gene_synonym="ECK0051" /gene_synonym="JW0049" /gene_synonym="temP" /db_xref="EcoGene:EG10047" CDS complement(51229..51606) /gene="apaG" /locus_tag="b0050" /gene_synonym="corD" /gene_synonym="ECK0051" /gene_synonym="JW0049" /gene_synonym="temP" /codon_start=1 /transl_table=11 /product="protein associated with Co2+ and Mg2+ efflux" /protein_id="AAC73161.1" /db_xref="GI:1786235" /db_xref="ASAP:ABE-0000169" /db_xref="UniProtKB/Swiss-Prot:P62672" /db_xref="EcoGene:EG10047" /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI DENGVPFSIDIPVFRLAVPTLIH" gene complement(51609..52430) /gene="rsmA" /locus_tag="b0051" /gene_synonym="ECK0052" /gene_synonym="JW0050" /gene_synonym="ksgA" /db_xref="EcoGene:EG10523" CDS complement(51609..52430) /gene="rsmA" /locus_tag="b0051" /gene_synonym="ECK0052" /gene_synonym="JW0050" /gene_synonym="ksgA" /EC_number="2.1.1.-" /function="enzyme; rRNA modification; drug/analog sensitivity" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent" /protein_id="AAC73162.1" /db_xref="GI:1786236" /db_xref="ASAP:ABE-0000175" /db_xref="UniProtKB/Swiss-Prot:P06992" /db_xref="EcoGene:EG10523" /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES" gene complement(52427..53416) /gene="pdxA" /locus_tag="b0052" /gene_synonym="ECK0053" /gene_synonym="JW0051" /db_xref="EcoGene:EG10691" CDS complement(52427..53416) /gene="pdxA" /locus_tag="b0052" /gene_synonym="ECK0053" /gene_synonym="JW0051" /EC_number="1.1.1.262" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="pyridoxine biosynthesis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent" /protein_id="AAC73163.1" /db_xref="GI:1786237" /db_xref="ASAP:ABE-0000178" /db_xref="UniProtKB/Swiss-Prot:P19624" /db_xref="EcoGene:EG10691" /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT NRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLA RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM GTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ GFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ" gene complement(53416..54702) /gene="surA" /locus_tag="b0053" /gene_synonym="ECK0054" /gene_synonym="JW0052" /db_xref="EcoGene:EG10985" CDS complement(53416..54702) /gene="surA" /locus_tag="b0053" /gene_synonym="ECK0054" /gene_synonym="JW0052" /EC_number="5.2.1.8" /function="phenotype; Not classified" /note="survival protein; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase (PPIase)" /protein_id="AAC73164.1" /db_xref="GI:1786238" /db_xref="ASAP:ABE-0000180" /db_xref="UniProtKB/Swiss-Prot:P0ABZ6" /db_xref="EcoGene:EG10985" /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN" gene complement(54755..57109) /gene="lptD" /locus_tag="b0054" /gene_synonym="ECK0055" /gene_synonym="imp" /gene_synonym="JW0053" /gene_synonym="ostA" /gene_synonym="yabG" /db_xref="EcoGene:EG11569" CDS complement(54755..57109) /gene="lptD" /locus_tag="b0054" /gene_synonym="ECK0055" /gene_synonym="imp" /gene_synonym="JW0053" /gene_synonym="ostA" /gene_synonym="yabG" /function="phenotype; Adaptations, atypical conditions" /note="organic solvent tolerance; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="LPS assembly OM complex LptDE, beta-barrel component" /protein_id="AAC73165.1" /db_xref="GI:1786239" /db_xref="ASAP:ABE-0000183" /db_xref="UniProtKB/Swiss-Prot:P31554" /db_xref="EcoGene:EG11569" /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL" gene 57364..58179 /gene="djlA" /locus_tag="b0055" /gene_synonym="ECK0056" /gene_synonym="JW0054" /gene_synonym="yabH" /db_xref="EcoGene:EG11570" CDS 57364..58179 /gene="djlA" /locus_tag="b0055" /gene_synonym="ECK0056" /gene_synonym="JW0054" /gene_synonym="yabH" /function="factor; Chaperones" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="membrane-anchored DnaK co-chaperone, DNA-binding protein" /protein_id="AAC73166.1" /db_xref="GI:1786241" /db_xref="ASAP:ABE-0000187" /db_xref="UniProtKB/Swiss-Prot:P31680" /db_xref="EcoGene:EG11570" /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE LGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDA TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK" gene 58474..59279 /gene="yabP" /locus_tag="b4659" /gene_synonym="ECK0057" /gene_synonym="JW0055" /gene_synonym="yabQ" /pseudo /db_xref="EcoGene:EG12610" CDS join(58474..59052,59052..59279) /gene="yabP" /locus_tag="b4659" /gene_synonym="ECK0057" /gene_synonym="JW0055" /gene_synonym="yabQ" /note="pseudogene, pentapeptide repeats-containing" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000192" /db_xref="ASAP:ABE-0000194" /db_xref="UniProtKB/Swiss-Prot:P39220" /db_xref="EcoGene:EG12610" gene complement(59687..60346) /gene="rluA" /locus_tag="b0058" /gene_synonym="ECK0059" /gene_synonym="JW0057" /gene_synonym="yabO" /db_xref="EcoGene:EG12609" CDS complement(59687..60346) /gene="rluA" /locus_tag="b0058" /gene_synonym="ECK0059" /gene_synonym="JW0057" /gene_synonym="yabO" /EC_number="4.2.1.70" /function="enzyme; rRNA modification; tRNA modification" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent" /protein_id="AAC73169.1" /db_xref="GI:1786244" /db_xref="ASAP:ABE-0000196" /db_xref="UniProtKB/Swiss-Prot:P0AA37" /db_xref="EcoGene:EG12609" /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD F" gene complement(60358..63264) /gene="rapA" /locus_tag="b0059" /gene_synonym="ECK0060" /gene_synonym="hepA" /gene_synonym="JW0058" /gene_synonym="yabA" /db_xref="EcoGene:EG11083" CDS complement(60358..63264) /gene="rapA" /locus_tag="b0059" /gene_synonym="ECK0060" /gene_synonym="hepA" /gene_synonym="JW0058" /gene_synonym="yabA" /EC_number="3.6.1.-" /function="putative enzyme; RNA synthesis, modification, DNA transcription" /note="probable ATP-dependent RNA helicase; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase" /protein_id="AAC73170.1" /db_xref="GI:1786245" /db_xref="ASAP:ABE-0000198" /db_xref="UniProtKB/Swiss-Prot:P60240" /db_xref="EcoGene:EG11083" /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ" gene complement(63429..65780) /gene="polB" /locus_tag="b0060" /gene_synonym="dinA" /gene_synonym="ECK0061" /gene_synonym="JW0059" /db_xref="EcoGene:EG10747" CDS complement(63429..65780) /gene="polB" /locus_tag="b0060" /gene_synonym="dinA" /gene_synonym="ECK0061" /gene_synonym="JW0059" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009314 - response to radiation; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA polymerase II" /protein_id="AAC73171.1" /db_xref="GI:1786246" /db_xref="ASAP:ABE-0000202" /db_xref="UniProtKB/Swiss-Prot:P21189" /db_xref="EcoGene:EG10747" /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF" gene complement(65855..66550) /gene="araD" /locus_tag="b0061" /gene_synonym="ECK0062" /gene_synonym="JW0060" /db_xref="EcoGene:EG10055" CDS complement(65855..66550) /gene="araD" /locus_tag="b0061" /gene_synonym="ECK0062" /gene_synonym="JW0060" /EC_number="5.1.3.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3549454,8520491" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="AAC73172.1" /db_xref="GI:1786247" /db_xref="ASAP:ABE-0000209" /db_xref="UniProtKB/Swiss-Prot:P08203" /db_xref="EcoGene:EG10055" /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH YLRKHGAKAYYGQ" repeat_region 66565..66812 /note="REP6 (repetitive extragenic palindromic) element; contains 6 REP sequences" gene complement(66835..68337) /gene="araA" /locus_tag="b0062" /gene_synonym="ECK0063" /gene_synonym="JW0061" /db_xref="EcoGene:EG10052" CDS complement(66835..68337) /gene="araA" /locus_tag="b0062" /gene_synonym="ECK0063" /gene_synonym="JW0061" /EC_number="5.3.1.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3549454" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose isomerase" /protein_id="AAC73173.1" /db_xref="GI:1786248" /db_xref="ASAP:ABE-0000221" /db_xref="UniProtKB/Swiss-Prot:P08202" /db_xref="EcoGene:EG10052" /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV NSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFT TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED YTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR" gene complement(68348..70048) /gene="araB" /locus_tag="b0063" /gene_synonym="ECK0064" /gene_synonym="JW0062" /db_xref="EcoGene:EG10053" CDS complement(68348..70048) /gene="araB" /locus_tag="b0063" /gene_synonym="ECK0064" /gene_synonym="JW0062" /EC_number="2.7.1.16" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-ribulokinase" /protein_id="AAC73174.1" /db_xref="GI:1786249" /db_xref="ASAP:ABE-0000223" /db_xref="UniProtKB/Swiss-Prot:P08204" /db_xref="EcoGene:EG10053" /translation="MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCD APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG QSAFGDIYAWFGRVLGWPLEQLAAQHPELKTQINASQKQLLPALTEAWAKNPSLDHLP VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP SAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL " gene 70387..71265 /gene="araC" /locus_tag="b0064" /gene_synonym="ECK0065" /gene_synonym="JW0063" /db_xref="EcoGene:EG10054" CDS 70387..71265 /gene="araC" /locus_tag="b0064" /gene_synonym="ECK0065" /gene_synonym="JW0063" /function="regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional regulator for ara operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="ara regulon transcriptional activator; autorepressor" /protein_id="AAC73175.1" /db_xref="GI:1786251" /db_xref="ASAP:ABE-0000236" /db_xref="UniProtKB/Swiss-Prot:P0A9E0" /db_xref="EcoGene:EG10054" /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF RAGCEEKVNDVAVKLS" gene 71351..72115 /gene="yabI" /locus_tag="b0065" /gene_synonym="ECK0066" /gene_synonym="JW5005" /db_xref="EcoGene:EG11571" CDS 71351..72115 /gene="yabI" /locus_tag="b0065" /gene_synonym="ECK0066" /gene_synonym="JW5005" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DedA family inner membrane protein" /protein_id="AAC73176.1" /db_xref="GI:1786252" /db_xref="ASAP:ABE-0000241" /db_xref="UniProtKB/Swiss-Prot:P30149" /db_xref="EcoGene:EG11571" /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG LGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV" repeat_region 72136..72220 /note="REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(72229..72927) /gene="thiQ" /locus_tag="b0066" /gene_synonym="ECK0067" /gene_synonym="JW0065" /gene_synonym="sfuC" /gene_synonym="yabJ" /db_xref="EcoGene:EG11572" CDS complement(72229..72927) /gene="thiQ" /locus_tag="b0066" /gene_synonym="ECK0067" /gene_synonym="JW0065" /gene_synonym="sfuC" /gene_synonym="yabJ" /function="transport; Transport of small molecules: Other" /note="putative ATP-binding component of a transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="thiamine/thiamine pyrophosphate ABC transporter ATPase" /protein_id="AAC73177.1" /db_xref="GI:1786253" /db_xref="ASAP:ABE-0000244" /db_xref="UniProtKB/Swiss-Prot:P31548" /db_xref="EcoGene:EG11572" /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL IAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL NAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELL SGKASASALLGITG" gene complement(72911..74521) /gene="thiP" /locus_tag="b0067" /gene_synonym="ECK0068" /gene_synonym="JW0066" /gene_synonym="sfuB" /gene_synonym="yabK" /db_xref="EcoGene:EG11573" CDS complement(72911..74521) /gene="thiP" /locus_tag="b0067" /gene_synonym="ECK0068" /gene_synonym="JW0066" /gene_synonym="sfuB" /gene_synonym="yabK" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="thiamine/thiamine pyrophosphate ABC transporter permease" /protein_id="AAC73178.1" /db_xref="GI:1786254" /db_xref="ASAP:ABE-0000246" /db_xref="UniProtKB/Swiss-Prot:P31549" /db_xref="EcoGene:EG11573" /translation="MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWV AVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLIL PVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ ALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFL LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA VTALILLLLCFLLFTVIEKLPGRNVKTD" gene complement(74497..75480) /gene="thiB" /locus_tag="b0068" /gene_synonym="ECK0069" /gene_synonym="JW0067" /gene_synonym="sfuA" /gene_synonym="tbpA" /gene_synonym="yabL" /db_xref="EcoGene:EG11574" CDS complement(74497..75480) /gene="thiB" /locus_tag="b0068" /gene_synonym="ECK0069" /gene_synonym="JW0067" /gene_synonym="sfuA" /gene_synonym="tbpA" /gene_synonym="yabL" /function="transport; Transport of small molecules: Other" /note="thiamin-binding periplasmic protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein" /protein_id="AAC73179.1" /db_xref="GI:1786255" /db_xref="ASAP:ABE-0000249" /db_xref="UniProtKB/Swiss-Prot:P31550" /db_xref="EcoGene:EG11574" /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAF EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP TGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR" gene complement(75644..77299) /gene="sgrR" /locus_tag="b0069" /gene_synonym="ECK0070" /gene_synonym="JW0068" /gene_synonym="yabN" /db_xref="EcoGene:EG12094" CDS complement(75644..77299) /gene="sgrR" /locus_tag="b0069" /gene_synonym="ECK0070" /gene_synonym="JW0068" /gene_synonym="yabN" /function="transport; Not classified" /note="putative transport protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="transcriptional DNA-binding transcriptional activator of sgrS sRNA" /protein_id="AAC73180.1" /db_xref="GI:1786256" /db_xref="ASAP:ABE-0000251" /db_xref="UniProtKB/Swiss-Prot:P33595" /db_xref="EcoGene:EG12094" /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN STNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIES DIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA SKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP" gene 77367..77593 /gene="sgrS" /locus_tag="b4577" /gene_synonym="ECK0071" /gene_synonym="JWR0259" /gene_synonym="ryaA" /db_xref="EcoGene:EG31149" ncRNA 77367..77593 /ncRNA_class="antisense_RNA" /gene="sgrS" /locus_tag="b4577" /gene_synonym="ECK0071" /gene_synonym="JWR0259" /gene_synonym="ryaA" /product="sRNA antisense regulator destabilzes ptsG mRNA, Hfq-dependent; regulated by sgrR" /db_xref="ASAP:ABE-0285090" /db_xref="EcoGene:EG31149" gene 77388..77519 /gene="sgrT" /locus_tag="b4662" /gene_synonym="ECK4477" /db_xref="EcoGene:EG14467" CDS 77388..77519 /gene="sgrT" /locus_tag="b4662" /gene_synonym="ECK4477" /codon_start=1 /transl_table=11 /product="inhibitor of glucose uptake" /protein_id="ACO59989.1" /db_xref="GI:226510924" /db_xref="UniProtKB/Swiss-Prot:C1P5Z7" /db_xref="EcoGene:EG14467" /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES" gene 77621..78799 /gene="setA" /locus_tag="b0070" /gene_synonym="ECK0072" /gene_synonym="JW0069" /gene_synonym="yabM" /db_xref="EcoGene:EG11754" CDS 77621..78799 /gene="setA" /locus_tag="b0070" /gene_synonym="ECK0072" /gene_synonym="JW0069" /gene_synonym="yabM" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015543 - lactose/glucose efflux transporter activity; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="broad specificity sugar efflux system" /protein_id="AAT48123.1" /db_xref="GI:48994875" /db_xref="ASAP:ABE-0000257" /db_xref="UniProtKB/Swiss-Prot:P31675" /db_xref="EcoGene:EG11754" /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVR MLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVK RYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP GRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV " gene complement(78848..79453) /gene="leuD" /locus_tag="b0071" /gene_synonym="ECK0073" /gene_synonym="JW0070" /db_xref="EcoGene:EG11575" CDS complement(78848..79453) /gene="leuD" /locus_tag="b0071" /gene_synonym="ECK0073" /gene_synonym="JW0070" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /note="isopropylmalate isomerase subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase small subunit" /protein_id="AAC73182.1" /db_xref="GI:1786258" /db_xref="ASAP:ABE-0000259" /db_xref="UniProtKB/Swiss-Prot:P30126" /db_xref="EcoGene:EG11575" /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN" gene complement(79464..80864) /gene="leuC" /locus_tag="b0072" /gene_synonym="ECK0074" /gene_synonym="JW0071" /db_xref="EcoGene:EG11576" CDS complement(79464..80864) /gene="leuC" /locus_tag="b0072" /gene_synonym="ECK0074" /gene_synonym="JW0071" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /note="3-isopropylmalate isomerase (dehydratase) subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase large subunit" /protein_id="AAC73183.1" /db_xref="GI:1786259" /db_xref="ASAP:ABE-0000261" /db_xref="UniProtKB/Swiss-Prot:P0A6A6" /db_xref="EcoGene:EG11576" /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA AAAAVTGHFADIRNIK" gene complement(80867..81958) /gene="leuB" /locus_tag="b0073" /gene_synonym="ECK0075" /gene_synonym="JW5807" /db_xref="EcoGene:EG11577" CDS complement(80867..81958) /gene="leuB" /locus_tag="b0073" /gene_synonym="ECK0075" /gene_synonym="JW5807" /EC_number="1.1.1.85" /function="enzyme; Amino acid biosynthesis: Leucine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase, NAD(+)-dependent" /protein_id="AAC73184.2" /db_xref="GI:87081683" /db_xref="ASAP:ABE-0000265" /db_xref="UniProtKB/Swiss-Prot:P30125" /db_xref="EcoGene:EG11577" /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI RTGDLARGAAAVSTDEMGDIIARYVAEGV" gene complement(81958..83529) /gene="leuA" /locus_tag="b0074" /gene_synonym="ECK0076" /gene_synonym="JW0073" /db_xref="EcoGene:EG11226" CDS complement(81958..83529) /gene="leuA" /locus_tag="b0074" /gene_synonym="ECK0076" /gene_synonym="JW0073" /EC_number="2.3.3.13" /function="enzyme; Amino acid biosynthesis: Leucine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="AAC73185.1" /db_xref="GI:1786261" /db_xref="ASAP:ABE-0000267" /db_xref="UniProtKB/Swiss-Prot:P09151" /db_xref="EcoGene:EG11226" /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITEYNVELVKYS LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE LQRKAQHNENNKETV" gene complement(83622..83708) /gene="leuL" /locus_tag="b0075" /gene_synonym="ECK0077" /gene_synonym="JW0074" /gene_synonym="leuLP" /db_xref="EcoGene:EG11280" CDS complement(83622..83708) /gene="leuL" /locus_tag="b0075" /gene_synonym="ECK0077" /gene_synonym="JW0074" /gene_synonym="leuLP" /function="leader; Amino acid biosynthesis: Leucine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009098 - leucine biosynthetic process" /codon_start=1 /transl_table=11 /product="leu operon leader peptide" /protein_id="AAC73186.1" /db_xref="GI:1786263" /db_xref="ASAP:ABE-0000269" /db_xref="UniProtKB/Swiss-Prot:P0AD79" /db_xref="EcoGene:EG11280" /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH" gene 84368..85312 /gene="leuO" /locus_tag="b0076" /gene_synonym="ECK0078" /gene_synonym="JW0075" /db_xref="EcoGene:EG10531" CDS 84368..85312 /gene="leuO" /locus_tag="b0076" /gene_synonym="ECK0078" /gene_synonym="JW0075" /function="putative regulator; Amino acid biosynthesis: Leucine" /note="probable transcriptional activator for leuABCD operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009098 - leucine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="global transcription factor" /protein_id="AAC73187.2" /db_xref="GI:87081684" /db_xref="ASAP:ABE-0000280" /db_xref="UniProtKB/Swiss-Prot:P10151" /db_xref="EcoGene:EG10531" /translation="MPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR" gene 85630..87354 /gene="ilvI" /locus_tag="b0077" /gene_synonym="ECK0079" /gene_synonym="JW0076" /db_xref="EcoGene:EG10500" CDS 85630..87354 /gene="ilvI" /locus_tag="b0077" /gene_synonym="ECK0079" /gene_synonym="JW0076" /EC_number="2.2.1.6" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /experiment="N-terminus verified by Edman degradation: PMID 3881131,9298646" /note="acetolactate synthase III, valine sensitive, large subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase 3 large subunit" /protein_id="AAC73188.2" /db_xref="GI:87081685" /db_xref="ASAP:ABE-0000290" /db_xref="UniProtKB/Swiss-Prot:P00893" /db_xref="EcoGene:EG10500" /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAI TAGCHQQLKETVEALNLPVVCSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM WLSKTERT" gene 87357..87848 /gene="ilvH" /locus_tag="b0078" /gene_synonym="brnP" /gene_synonym="ECK0080" /gene_synonym="JW0077" /db_xref="EcoGene:EG10499" CDS 87357..87848 /gene="ilvH" /locus_tag="b0078" /gene_synonym="brnP" /gene_synonym="ECK0080" /gene_synonym="JW0077" /EC_number="2.2.1.6" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="acetolactate synthase III, valine sensitive, small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase 3, small subunit, valine-sensitive" /protein_id="AAC73189.1" /db_xref="GI:1786266" /db_xref="ASAP:ABE-0000294" /db_xref="UniProtKB/Swiss-Prot:P00894" /db_xref="EcoGene:EG10499" /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK RNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDK IMR" gene 88028..89032 /gene="cra" /locus_tag="b0080" /gene_synonym="ECK0081" /gene_synonym="fruC" /gene_synonym="fruR" /gene_synonym="fruS?" /gene_synonym="JW0078" /gene_synonym="serR?" /gene_synonym="shl" /db_xref="EcoGene:EG10338" CDS 88028..89032 /gene="cra" /locus_tag="b0080" /gene_synonym="ECK0081" /gene_synonym="fruC" /gene_synonym="fruR" /gene_synonym="fruS?" /gene_synonym="JW0078" /gene_synonym="serR?" /gene_synonym="shl" /function="regulator; Energy metabolism, carbon: Glycolysis" /note="transcriptional repressor of fru operon and others; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor-activator for carbon metabolism" /protein_id="AAC73191.1" /db_xref="GI:1786268" /db_xref="ASAP:ABE-0000299" /db_xref="UniProtKB/Swiss-Prot:P0ACP1" /db_xref="EcoGene:EG10338" /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS " gene 89634..90092 /gene="mraZ" /locus_tag="b0081" /gene_synonym="ECK0082" /gene_synonym="JW0079" /gene_synonym="yabB" /db_xref="EcoGene:EG11084" CDS 89634..90092 /gene="mraZ" /locus_tag="b0081" /gene_synonym="ECK0082" /gene_synonym="JW0079" /gene_synonym="yabB" /codon_start=1 /transl_table=11 /product="RsmH methytransferase inhibitor" /protein_id="AAC73192.1" /db_xref="GI:1786269" /db_xref="ASAP:ABE-0000302" /db_xref="UniProtKB/Swiss-Prot:P22186" /db_xref="EcoGene:EG11084" /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIYHPC LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL" gene 90094..91035 /gene="rsmH" /locus_tag="b0082" /gene_synonym="ECK0083" /gene_synonym="JW0080" /gene_synonym="mraW" /gene_synonym="yabC" /db_xref="EcoGene:EG11085" CDS 90094..91035 /gene="rsmH" /locus_tag="b0082" /gene_synonym="ECK0083" /gene_synonym="JW0080" /gene_synonym="mraW" /gene_synonym="yabC" /EC_number="2.1.1.-" /function="enzyme; rRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 10572301" /note="putative apolipoprotein; GO_process: GO:0042158 - lipoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="16S rRNA m(4)C1402 methyltransferase, SAM-dependent" /protein_id="AAC73193.1" /db_xref="GI:1786270" /db_xref="ASAP:ABE-0000304" /db_xref="UniProtKB/Swiss-Prot:P60390" /db_xref="EcoGene:EG11085" /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA" gene 91032..91397 /gene="ftsL" /locus_tag="b0083" /gene_synonym="ECK0084" /gene_synonym="JW0081" /gene_synonym="mraR" /gene_synonym="yabD" /db_xref="EcoGene:EG11086" CDS 91032..91397 /gene="ftsL" /locus_tag="b0083" /gene_synonym="ECK0084" /gene_synonym="JW0081" /gene_synonym="mraR" /gene_synonym="yabD" /function="phenotype; Cell division" /note="cell division protein; ingrowth of wall at septum" /codon_start=1 /transl_table=11 /product="membrane bound cell division leucine zipper septum protein" /protein_id="AAC73194.1" /db_xref="GI:1786271" /db_xref="ASAP:ABE-0000306" /db_xref="UniProtKB/Swiss-Prot:P0AEN4" /db_xref="EcoGene:EG11086" /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT EKLQMQHVDPSQENIVVQK" gene 91413..93179 /gene="ftsI" /locus_tag="b0084" /gene_synonym="ECK0085" /gene_synonym="JW0082" /gene_synonym="pbpB" /gene_synonym="sep" /db_xref="EcoGene:EG10341" CDS 91413..93179 /gene="ftsI" /locus_tag="b0084" /gene_synonym="ECK0085" /gene_synonym="JW0082" /gene_synonym="pbpB" /gene_synonym="sep" /function="enzyme; Cell division" /note="septum formation; penicillin-binding protein 3; peptidoglycan synthetase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="transpeptidase involved in septal peptidoglycan synthesis; penicillin-binding protein 3" /protein_id="AAC73195.1" /db_xref="GI:1786272" /db_xref="ASAP:ABE-0000309" /db_xref="UniProtKB/Swiss-Prot:P0AD68" /db_xref="EcoGene:EG10341" /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD ALTTGDKNEFVINQGEGTGGRS" gene 93166..94653 /gene="murE" /locus_tag="b0085" /gene_synonym="ECK0086" /gene_synonym="JW0083" /db_xref="EcoGene:EG10621" CDS 93166..94653 /gene="murE" /locus_tag="b0085" /gene_synonym="ECK0086" /gene_synonym="JW0083" /EC_number="6.3.2.13" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase" /protein_id="AAC73196.1" /db_xref="GI:1786273" /db_xref="ASAP:ABE-0000311" /db_xref="UniProtKB/Swiss-Prot:P22188" /db_xref="EcoGene:EG10621" /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTG SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA TEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA" gene 94650..96008 /gene="murF" /locus_tag="b0086" /gene_synonym="ECK0087" /gene_synonym="JW0084" /gene_synonym="mra" /db_xref="EcoGene:EG10622" CDS 94650..96008 /gene="murF" /locus_tag="b0086" /gene_synonym="ECK0087" /gene_synonym="JW0084" /gene_synonym="mra" /EC_number="6.3.2.10" /function="enzyme; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 2186811" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase" /protein_id="AAC73197.1" /db_xref="GI:1786274" /db_xref="ASAP:ABE-0000313" /db_xref="UniProtKB/Swiss-Prot:P11880" /db_xref="EcoGene:EG10622" /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK QSHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENG TC" gene 96002..97084 /gene="mraY" /locus_tag="b0087" /gene_synonym="ECK0088" /gene_synonym="JW0085" /gene_synonym="murX" /db_xref="EcoGene:EG10604" CDS 96002..97084 /gene="mraY" /locus_tag="b0087" /gene_synonym="ECK0088" /gene_synonym="JW0085" /gene_synonym="murX" /EC_number="2.7.8.13" /function="enzyme; Murein sacculus, peptidoglycan" /note="phospho-N-acetylmuramoyl-pentapeptide transferase?; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide transferase" /protein_id="AAC73198.1" /db_xref="GI:1786275" /db_xref="ASAP:ABE-0000316" /db_xref="UniProtKB/Swiss-Prot:P0A6W3" /db_xref="EcoGene:EG10604" /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP EPRVIVRFWIISLMLVLIGLATLKVR" gene 97087..98403 /gene="murD" /locus_tag="b0088" /gene_synonym="ECK0089" /gene_synonym="JW0086" /db_xref="EcoGene:EG10620" CDS 97087..98403 /gene="murD" /locus_tag="b0088" /gene_synonym="ECK0089" /gene_synonym="JW0086" /EC_number="6.3.2.9" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase" /protein_id="AAC73199.1" /db_xref="GI:1786276" /db_xref="ASAP:ABE-0000318" /db_xref="UniProtKB/Swiss-Prot:P14900" /db_xref="EcoGene:EG10620" /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL HVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG" gene 98403..99647 /gene="ftsW" /locus_tag="b0089" /gene_synonym="ECK0090" /gene_synonym="JW0087" /db_xref="EcoGene:EG10344" CDS 98403..99647 /gene="ftsW" /locus_tag="b0089" /gene_synonym="ECK0090" /gene_synonym="JW0087" /function="membrane; Cell division" /note="cell division; membrane protein involved in shape determination; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative lipid II flippase; integral membrane protein; FtsZ ring stabilizer" /protein_id="AAC73200.1" /db_xref="GI:1786277" /db_xref="ASAP:ABE-0000320" /db_xref="UniProtKB/Swiss-Prot:P0ABG4" /db_xref="EcoGene:EG10344" /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM MLLRIDYETRLEKAQAFVRGSR" gene 99644..100711 /gene="murG" /locus_tag="b0090" /gene_synonym="ECK0091" /gene_synonym="JW0088" /db_xref="EcoGene:EG10623" CDS 99644..100711 /gene="murG" /locus_tag="b0090" /gene_synonym="ECK0091" /gene_synonym="JW0088" /EC_number="2.4.1.227" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylglucosaminyl transferase" /protein_id="AAC73201.1" /db_xref="GI:1786278" /db_xref="ASAP:ABE-0000322" /db_xref="UniProtKB/Swiss-Prot:P17443" /db_xref="EcoGene:EG10623" /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR AASIPDATERVANEVSRVARA" gene 100765..102240 /gene="murC" /locus_tag="b0091" /gene_synonym="ECK0092" /gene_synonym="JW0089" /db_xref="EcoGene:EG10619" CDS 100765..102240 /gene="murC" /locus_tag="b0091" /gene_synonym="ECK0092" /gene_synonym="JW0089" /EC_number="6.3.2.8" /function="enzyme; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 7601127" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate:L-alanine ligase" /protein_id="AAC73202.1" /db_xref="GI:1786279" /db_xref="ASAP:ABE-0000324" /db_xref="UniProtKB/Swiss-Prot:P17952" /db_xref="EcoGene:EG10619" /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEML APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD" gene 102233..103153 /gene="ddlB" /locus_tag="b0092" /gene_synonym="ddl" /gene_synonym="ECK0093" /gene_synonym="JW0090" /db_xref="EcoGene:EG10214" CDS 102233..103153 /gene="ddlB" /locus_tag="b0092" /gene_synonym="ddl" /gene_synonym="ECK0093" /gene_synonym="JW0090" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="D-alanine-D-alanine ligase B, affects cell division; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="D-alanine:D-alanine ligase" /protein_id="AAC73203.1" /db_xref="GI:1786280" /db_xref="ASAP:ABE-0000326" /db_xref="UniProtKB/Swiss-Prot:P07862" /db_xref="EcoGene:EG10214" /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG MTSHSLVPMAARQAGMSFSQLVVRILELAD" gene 103155..103985 /gene="ftsQ" /locus_tag="b0093" /gene_synonym="ECK0094" /gene_synonym="JW0091" /db_xref="EcoGene:EG10342" CDS 103155..103985 /gene="ftsQ" /locus_tag="b0093" /gene_synonym="ECK0094" /gene_synonym="JW0091" /function="phenotype; Cell division" /note="cell division protein; ingrowth of wall at septum; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="divisome assembly protein, membrane anchored protein involved in growth of wall at septum" /protein_id="AAC73204.1" /db_xref="GI:1786281" /db_xref="ASAP:ABE-0000329" /db_xref="UniProtKB/Swiss-Prot:P06136" /db_xref="EcoGene:EG10342" /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPML YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ " gene 103982..105244 /gene="ftsA" /locus_tag="b0094" /gene_synonym="divA" /gene_synonym="ECK0095" /gene_synonym="JW0092" /db_xref="EcoGene:EG10339" CDS 103982..105244 /gene="ftsA" /locus_tag="b0094" /gene_synonym="divA" /gene_synonym="ECK0095" /gene_synonym="JW0092" /function="phenotype; Cell division" /note="ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="ATP-binding cell division FtsK recruitment protein" /protein_id="AAC73205.1" /db_xref="GI:1786282" /db_xref="ASAP:ABE-0000331" /db_xref="UniProtKB/Swiss-Prot:P0ABH0" /db_xref="EcoGene:EG10339" /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN GEAEVEKRVTASVGSWIKRLNSWLRKEF" gene 105305..106456 /gene="ftsZ" /locus_tag="b0095" /gene_synonym="ECK0096" /gene_synonym="JW0093" /gene_synonym="sfiB" /gene_synonym="sulB" /db_xref="EcoGene:EG10347" CDS 105305..106456 /gene="ftsZ" /locus_tag="b0095" /gene_synonym="ECK0096" /gene_synonym="JW0093" /gene_synonym="sfiB" /gene_synonym="sulB" /function="enzyme; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="GTP-binding tubulin-like cell division protein" /protein_id="AAC73206.1" /db_xref="GI:1786284" /db_xref="ASAP:ABE-0000333" /db_xref="UniProtKB/Swiss-Prot:P0A9A6" /db_xref="EcoGene:EG10347" /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD" gene 106557..107474 /gene="lpxC" /locus_tag="b0096" /gene_synonym="asmB" /gene_synonym="ECK0097" /gene_synonym="envA" /gene_synonym="JW0094" /db_xref="EcoGene:EG10265" CDS 106557..107474 /gene="lpxC" /locus_tag="b0096" /gene_synonym="asmB" /gene_synonym="ECK0097" /gene_synonym="envA" /gene_synonym="JW0094" /EC_number="3.5.1.-" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 8530464" /note="UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-3-O-acyl N-acetylglucosamine deacetylase" /protein_id="AAC73207.1" /db_xref="GI:1786285" /db_xref="ASAP:ABE-0000336" /db_xref="UniProtKB/Swiss-Prot:P0A725" /db_xref="EcoGene:EG10265" /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL AKQEAWEYVTFQDDAELPLAFKAPSAVLA" gene 107705..108217 /gene="secM" /locus_tag="b0097" /gene_synonym="ECK0098" /gene_synonym="JW5007" /gene_synonym="srrA" /gene_synonym="yacA" /db_xref="EcoGene:EG11087" CDS 107705..108217 /gene="secM" /locus_tag="b0097" /gene_synonym="ECK0098" /gene_synonym="JW5007" /gene_synonym="srrA" /gene_synonym="yacA" /codon_start=1 /transl_table=11 /product="regulator of secA translation" /protein_id="AAC73208.2" /db_xref="GI:87081686" /db_xref="ASAP:ABE-0000340" /db_xref="UniProtKB/Swiss-Prot:P62395" /db_xref="EcoGene:EG11087" /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPA KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTL PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ GIRAGPQRLT" gene 108279..110984 /gene="secA" /locus_tag="b0098" /gene_synonym="azi" /gene_synonym="ECK0099" /gene_synonym="JW0096" /gene_synonym="pea" /gene_synonym="prlD" /db_xref="EcoGene:EG10936" CDS 108279..110984 /gene="secA" /locus_tag="b0098" /gene_synonym="azi" /gene_synonym="ECK0099" /gene_synonym="JW0096" /gene_synonym="pea" /gene_synonym="prlD" /function="transport; Protein, peptide secretion" /experiment="N-terminus verified by Edman degradation: PMID 2841285" /note="preprotein translocase; secretion protein; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit, ATPase" /protein_id="AAC73209.1" /db_xref="GI:1786287" /db_xref="ASAP:ABE-0000343" /db_xref="UniProtKB/Swiss-Prot:P10408" /db_xref="EcoGene:EG10936" /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ" gene 111044..111433 /gene="mutT" /locus_tag="b0099" /gene_synonym="ECK0100" /gene_synonym="JW0097" /gene_synonym="nudA" /db_xref="EcoGene:EG10626" CDS 111044..111433 /gene="mutT" /locus_tag="b0099" /gene_synonym="ECK0100" /gene_synonym="JW0097" /gene_synonym="nudA" /EC_number="3.6.1.-" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /experiment="N-terminus verified by Edman degradation: PMID 3288626" /note="7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="dGTP-preferring nucleoside triphosphate pyrophosphohydrolase" /protein_id="AAC73210.1" /db_xref="GI:1786288" /db_xref="ASAP:ABE-0000346" /db_xref="UniProtKB/Swiss-Prot:P08337" /db_xref="EcoGene:EG10626" /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPG EWMSLVGLNADDFPPANEPVIAKLKRL" repeat_region 111430..111629 /note="RIP8 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site" gene complement(111649..111846) /gene="yacG" /locus_tag="b0101" /gene_synonym="ECK0101" /gene_synonym="JW5008" /db_xref="EcoGene:EG12314" CDS complement(111649..111846) /gene="yacG" /locus_tag="b0101" /gene_synonym="ECK0101" /gene_synonym="JW5008" /codon_start=1 /transl_table=11 /product="DNA gyrase inhibitor" /protein_id="AAC73212.1" /db_xref="GI:1786290" /db_xref="ASAP:ABE-0000351" /db_xref="UniProtKB/Swiss-Prot:P0A8H8" /db_xref="EcoGene:EG12314" /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE KRIPSSGDLSESDDWSEEPKQ" gene complement(111856..112599) /gene="zapD" /locus_tag="b0102" /gene_synonym="ECK0102" /gene_synonym="JW0099" /gene_synonym="yacF" /db_xref="EcoGene:EG12313" CDS complement(111856..112599) /gene="zapD" /locus_tag="b0102" /gene_synonym="ECK0102" /gene_synonym="JW0099" /gene_synonym="yacF" /codon_start=1 /transl_table=11 /product="FtsZ stabilizer" /protein_id="AAC73213.1" /db_xref="GI:1786291" /db_xref="ASAP:ABE-0000355" /db_xref="UniProtKB/Swiss-Prot:P36680" /db_xref="EcoGene:EG12313" /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH KSRFAIRFMPLDTENGQVPERLDFELACC" gene complement(112599..113219) /gene="coaE" /locus_tag="b0103" /gene_synonym="ECK0103" /gene_synonym="JW0100" /gene_synonym="yacE" /db_xref="EcoGene:EG12312" CDS complement(112599..113219) /gene="coaE" /locus_tag="b0103" /gene_synonym="ECK0103" /gene_synonym="JW0100" /gene_synonym="yacE" /EC_number="2.7.1.24" /function="orf; Not classified" /note="putative DNA repair protein" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="AAC73214.1" /db_xref="GI:1786292" /db_xref="ASAP:ABE-0000357" /db_xref="UniProtKB/Swiss-Prot:P0A6I9" /db_xref="EcoGene:EG12312" /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP" gene 113444..114487 /gene="guaC" /locus_tag="b0104" /gene_synonym="ECK0104" /gene_synonym="JW0101" /db_xref="EcoGene:EG10422" CDS 113444..114487 /gene="guaC" /locus_tag="b0104" /gene_synonym="ECK0104" /gene_synonym="JW0101" /EC_number="1.7.1.7" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009152 - purine ribonucleotide biosynthetic process; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="GMP reductase" /protein_id="AAC73215.1" /db_xref="GI:1786293" /db_xref="ASAP:ABE-0000362" /db_xref="UniProtKB/Swiss-Prot:P60560" /db_xref="EcoGene:EG10422" /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI RVQEQENRIFNNL" gene complement(114522..115724) /gene="hofC" /locus_tag="b0106" /gene_synonym="ECK0105" /gene_synonym="hopC" /gene_synonym="JW0102" /gene_synonym="yacD" /db_xref="EcoGene:EG11798" CDS complement(114522..115724) /gene="hofC" /locus_tag="b0106" /gene_synonym="ECK0105" /gene_synonym="hopC" /gene_synonym="JW0102" /gene_synonym="yacD" /function="putative transport; Not classified" /note="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="assembly protein in type IV pilin biogenesis, transmembrane protein" /protein_id="AAC73217.1" /db_xref="GI:1786295" /db_xref="ASAP:ABE-0000366" /db_xref="UniProtKB/Swiss-Prot:P36646" /db_xref="EcoGene:EG11798" /translation="MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLS LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGQPIWLALKNTGEFSPLCLQLVRTG EASGSLDLMLDNLAHHHRENTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL GDAMSGMG" gene complement(115714..117099) /gene="hofB" /locus_tag="b0107" /gene_synonym="ECK0106" /gene_synonym="hopB" /gene_synonym="JW0103" /db_xref="EcoGene:EG12106" CDS complement(115714..117099) /gene="hofB" /locus_tag="b0107" /gene_synonym="ECK0106" /gene_synonym="hopB" /gene_synonym="JW0103" /function="putative transport; Not classified" /note="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="T2SE secretion family protein; P-loop ATPase superfamily protein" /protein_id="AAC73218.1" /db_xref="GI:1786296" /db_xref="ASAP:ABE-0000370" /db_xref="UniProtKB/Swiss-Prot:P36645" /db_xref="EcoGene:EG12106" /translation="MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFA TTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHI EPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVEL AGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLV LVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA RWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGF YGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEE LIRVLGMPHGE" gene complement(117109..117549) /gene="ppdD" /locus_tag="b0108" /gene_synonym="ECK0107" /gene_synonym="JW0104" /db_xref="EcoGene:EG12107" CDS complement(117109..117549) /gene="ppdD" /locus_tag="b0108" /gene_synonym="ECK0107" /gene_synonym="JW0104" /function="putative structural component; Surface structures" /note="prelipin peptidase dependent protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative prepilin peptidase-dependent pilin" /protein_id="AAC73219.1" /db_xref="GI:1786297" /db_xref="ASAP:ABE-0000372" /db_xref="UniProtKB/Swiss-Prot:P36647" /db_xref="EcoGene:EG12107" /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG LSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN" gene complement(117752..118645) /gene="nadC" /locus_tag="b0109" /gene_synonym="ECK0108" /gene_synonym="JW0105" /db_xref="EcoGene:EG11546" CDS complement(117752..118645) /gene="nadC" /locus_tag="b0109" /gene_synonym="ECK0108" /gene_synonym="JW0105" /EC_number="2.4.2.19" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /note="GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyltransferase" /protein_id="AAC73220.1" /db_xref="GI:1786299" /db_xref="ASAP:ABE-0000374" /db_xref="UniProtKB/Swiss-Prot:P30011" /db_xref="EcoGene:EG11546" /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ SLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD FISVGALTKHVQALDLSMRFR" gene 118733..119284 /gene="ampD" /locus_tag="b0110" /gene_synonym="ECK0109" /gene_synonym="JW0106" /db_xref="EcoGene:EG10041" CDS 118733..119284 /gene="ampD" /locus_tag="b0110" /gene_synonym="ECK0109" /gene_synonym="JW0106" /EC_number="3.5.1.28" /function="regulator; Not classified" /note="regulates ampC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase" /protein_id="AAC73221.1" /db_xref="GI:1786300" /db_xref="ASAP:ABE-0000380" /db_xref="UniProtKB/Swiss-Prot:P13016" /db_xref="EcoGene:EG10041" /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD RKTDPGPAFDWARFRVLVSKETT" gene 119281..120135 /gene="ampE" /locus_tag="b0111" /gene_synonym="ECK0110" /gene_synonym="JW0107" /db_xref="EcoGene:EG10042" CDS 119281..120135 /gene="ampE" /locus_tag="b0111" /gene_synonym="ECK0110" /gene_synonym="JW0107" /function="regulator; Drug/analog sensitivity" /note="regulates ampC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation" /protein_id="AAC73222.1" /db_xref="GI:1786301" /db_xref="ASAP:ABE-0000382" /db_xref="UniProtKB/Swiss-Prot:P0AE14" /db_xref="EcoGene:EG10042" /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL LTIYGALV" gene complement(120178..121551) /gene="aroP" /locus_tag="b0112" /gene_synonym="ECK0111" /gene_synonym="JW0108" /db_xref="EcoGene:EG10084" CDS complement(120178..121551) /gene="aroP" /locus_tag="b0112" /gene_synonym="ECK0111" /gene_synonym="JW0108" /function="transport; Transport of small molecules: Amino acids, amines" /note="aromatic amino acid transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009094 - L-phenylalanine biosynthetic process; GO_process: GO:0006571 - tyrosine biosynthetic process" /codon_start=1 /transl_table=11 /product="aromatic amino acid transporter" /protein_id="AAC73223.1" /db_xref="GI:1786302" /db_xref="ASAP:ABE-0000384" /db_xref="UniProtKB/Swiss-Prot:P15993" /db_xref="EcoGene:EG10084" /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT AKAVKAH" gene 122092..122856 /gene="pdhR" /locus_tag="b0113" /gene_synonym="aceC" /gene_synonym="ECK0112" /gene_synonym="genA" /gene_synonym="JW0109" /gene_synonym="yacB" /db_xref="EcoGene:EG11088" CDS 122092..122856 /gene="pdhR" /locus_tag="b0113" /gene_synonym="aceC" /gene_synonym="ECK0112" /gene_synonym="genA" /gene_synonym="JW0109" /gene_synonym="yacB" /function="regulator; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="transcriptional regulator for pyruvate dehydrogenase complex; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex repressor; autorepressor" /protein_id="AAC73224.1" /db_xref="GI:1786303" /db_xref="ASAP:ABE-0000394" /db_xref="UniProtKB/Swiss-Prot:P0ACL9" /db_xref="EcoGene:EG11088" /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN" gene 123017..125680 /gene="aceE" /locus_tag="b0114" /gene_synonym="ECK0113" /gene_synonym="JW0110" /db_xref="EcoGene:EG10024" CDS 123017..125680 /gene="aceE" /locus_tag="b0114" /gene_synonym="ECK0113" /gene_synonym="JW0110" /EC_number="1.2.4.1" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="pyruvate dehydrogenase (decarboxylase component); GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO_process: GO:0006096 - glycolysis; GO_process: GO:0009436 - glyoxylate catabolic process; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding" /protein_id="AAC73225.1" /db_xref="GI:1786304" /db_xref="ASAP:ABE-0000397" /db_xref="UniProtKB/Swiss-Prot:P0AFG8" /db_xref="EcoGene:EG10024" /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE LAKRGEIDKKVVADAIAKFNIDADKVNPRLA" gene 125695..127587 /gene="aceF" /locus_tag="b0115" /gene_synonym="ECK0114" /gene_synonym="JW0111" /db_xref="EcoGene:EG10025" CDS 125695..127587 /gene="aceF" /locus_tag="b0115" /gene_synonym="ECK0114" /gene_synonym="JW0111" /EC_number="2.3.1.12" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="pyruvate dehydrogenase (dihydrolipoyltransacetylase component); GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO_process: GO:0006096 - glycolysis; GO_process: GO:0009436 - glyoxylate catabolic process; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2" /protein_id="AAC73226.1" /db_xref="GI:1786305" /db_xref="ASAP:ABE-0000400" /db_xref="UniProtKB/Swiss-Prot:P06959" /db_xref="EcoGene:EG10025" /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD IRRLVM" gene 127912..129336 /gene="lpd" /locus_tag="b0116" /gene_synonym="dhl" /gene_synonym="ECK0115" /gene_synonym="JW0112" /gene_synonym="lpdA" /db_xref="EcoGene:EG10543" CDS 127912..129336 /gene="lpd" /locus_tag="b0116" /gene_synonym="dhl" /gene_synonym="ECK0115" /gene_synonym="JW0112" /gene_synonym="lpdA" /EC_number="1.8.1.4" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006086 - acetyl-CoA biosynthetic process from pyruvate; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0009436 - glyoxylate catabolic process" /codon_start=1 /transl_table=11 /product="dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase" /protein_id="AAC73227.1" /db_xref="GI:1786307" /db_xref="ASAP:ABE-0000404" /db_xref="UniProtKB/Swiss-Prot:P0A9P0" /db_xref="EcoGene:EG10543" /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE SVGLAAEVFEGSITDLPNPKAKKK" repeat_region 129347..129361 /note="REP9 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(129407..131260) /gene="yacH" /locus_tag="b0117" /gene_synonym="ECK0116" /gene_synonym="JW0113" /db_xref="EcoGene:EG12315" CDS complement(129407..131260) /gene="yacH" /locus_tag="b0117" /gene_synonym="ECK0116" /gene_synonym="JW0113" /function="putative membrane; Not classified" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF3300 family protein" /protein_id="AAC73228.1" /db_xref="GI:1786308" /db_xref="ASAP:ABE-0000406" /db_xref="UniProtKB/Swiss-Prot:P36682" /db_xref="EcoGene:EG12315" /translation="MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQ LAVSDAAAVTFPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY PTNVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSN TVLTANPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP FVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNGWQHN GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA TQLPAPTRDSQRQAAANQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFS RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQRREAARERIQSASPEQRQ AVREKMQTNPQNQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA SPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVCERLSERGARRLER" gene 131615..134212 /gene="acnB" /locus_tag="b0118" /gene_synonym="ECK0117" /gene_synonym="JW0114" /gene_synonym="yacI" /gene_synonym="yacJ" /db_xref="EcoGene:EG12316" CDS 131615..134212 /gene="acnB" /locus_tag="b0118" /gene_synonym="ECK0117" /gene_synonym="JW0114" /gene_synonym="yacI" /gene_synonym="yacJ" /EC_number="4.2.1.3" /EC_number="4.2.1.99" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 8932712,9298646,12473114" /note="aconitate hydrase B; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="aconitate hydratase 2; aconitase B; 2-methyl-cis-aconitate hydratase" /protein_id="AAC73229.1" /db_xref="GI:2367097" /db_xref="ASAP:ABE-0000411" /db_xref="UniProtKB/Swiss-Prot:P36683" /db_xref="EcoGene:EG12316" /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA DGVIFQTAV" gene 134388..134750 /gene="yacL" /locus_tag="b0119" /gene_synonym="ECK0118" /gene_synonym="JW0115" /db_xref="EcoGene:EG12605" CDS 134388..134750 /gene="yacL" /locus_tag="b0119" /gene_synonym="ECK0118" /gene_synonym="JW0115" /codon_start=1 /transl_table=11 /product="UPF0231 family protein" /protein_id="AAC73230.2" /db_xref="GI:87081687" /db_xref="ASAP:ABE-0000414" /db_xref="UniProtKB/Swiss-Prot:P0A8E5" /db_xref="EcoGene:EG12605" /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG VEDFLQVVAAYRNFVQQK" gene complement(134788..135582) /gene="speD" /locus_tag="b0120" /gene_synonym="ECK0119" /gene_synonym="JW0116" /db_xref="EcoGene:EG10962" CDS complement(134788..135582) /gene="speD" /locus_tag="b0120" /gene_synonym="ECK0119" /gene_synonym="JW0116" /EC_number="4.1.1.50" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3546296" /note="GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine decarboxylase" /protein_id="AAC73231.1" /db_xref="GI:1786311" /db_xref="ASAP:ABE-0000416" /db_xref="UniProtKB/Swiss-Prot:P0A7F6" /db_xref="EcoGene:EG10962" /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV" gene complement(135598..136464) /gene="speE" /locus_tag="b0121" /gene_synonym="ECK0120" /gene_synonym="JW0117" /db_xref="EcoGene:EG10963" CDS complement(135598..136464) /gene="speE" /locus_tag="b0121" /gene_synonym="ECK0120" /gene_synonym="JW0117" /EC_number="2.5.1.16" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="spermidine synthase = putrescine aminopropyltransferase; GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="spermidine synthase (putrescine aminopropyltransferase)" /protein_id="AAC73232.1" /db_xref="GI:1786312" /db_xref="ASAP:ABE-0000418" /db_xref="UniProtKB/Swiss-Prot:P09158" /db_xref="EcoGene:EG10963" /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP QYLQDALASQPS" gene complement(136570..136917) /gene="yacC" /locus_tag="b0122" /gene_synonym="ECK0121" /gene_synonym="gspS" /gene_synonym="JW0118" /db_xref="EcoGene:EG11089" CDS complement(136570..136917) /gene="yacC" /locus_tag="b0122" /gene_synonym="ECK0121" /gene_synonym="gspS" /gene_synonym="JW0118" /codon_start=1 /transl_table=11 /product="PulS_OutS family protein" /protein_id="AAC73233.2" /db_xref="GI:87081688" /db_xref="ASAP:ABE-0000423" /db_xref="UniProtKB/Swiss-Prot:P0AA95" /db_xref="EcoGene:EG11089" /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA LARDSLSLLAYVK" gene 137083..138633 /gene="cueO" /locus_tag="b0123" /gene_synonym="cuiD" /gene_synonym="ECK0122" /gene_synonym="JW0119" /gene_synonym="yacK" /db_xref="EcoGene:EG12318" CDS 137083..138633 /gene="cueO" /locus_tag="b0123" /gene_synonym="cuiD" /gene_synonym="ECK0122" /gene_synonym="JW0119" /gene_synonym="yacK" /codon_start=1 /transl_table=11 /product="multicopper oxidase (laccase)" /protein_id="AAC73234.1" /db_xref="GI:1786314" /db_xref="ASAP:ABE-0000430" /db_xref="UniProtKB/Swiss-Prot:P36649" /db_xref="EcoGene:EG12318" /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA RNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV VIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT GMMLGFTV" repeat_region 138699..138796 /note="RIP10 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(138835..141225) /gene="gcd" /locus_tag="b0124" /gene_synonym="ECK0123" /gene_synonym="JW0120" /db_xref="EcoGene:EG10369" CDS complement(138835..141225) /gene="gcd" /locus_tag="b0124" /gene_synonym="ECK0123" /gene_synonym="JW0120" /EC_number="1.1.5.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8509415" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucose dehydrogenase" /protein_id="AAC73235.1" /db_xref="GI:1786316" /db_xref="ASAP:ABE-0000433" /db_xref="UniProtKB/Swiss-Prot:P15877" /db_xref="EcoGene:EG10369" /translation="MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYP IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI WLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSADATPAEAI SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAE TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQM RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK" gene 141431..141967 /gene="hpt" /locus_tag="b0125" /gene_synonym="ECK0124" /gene_synonym="JW5009" /db_xref="EcoGene:EG20098" CDS 141431..141967 /gene="hpt" /locus_tag="b0125" /gene_synonym="ECK0124" /gene_synonym="JW5009" /EC_number="2.4.2.8" /function="enzyme; Salvage of nucleosides and nucleotides" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="AAC73236.2" /db_xref="GI:87081689" /db_xref="ASAP:ABE-0000440" /db_xref="UniProtKB/Swiss-Prot:P0A9M2" /db_xref="EcoGene:EG20098" /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY AQRYRHLPYIGKVILLDE" repeat_region 141978..141998 /note="REP11 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(142008..142670) /gene="can" /locus_tag="b0126" /gene_synonym="ECK0125" /gene_synonym="JW0122" /gene_synonym="yadF" /db_xref="EcoGene:EG12319" CDS complement(142008..142670) /gene="can" /locus_tag="b0126" /gene_synonym="ECK0125" /gene_synonym="JW0122" /gene_synonym="yadF" /EC_number="4.2.1.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="putative carbonic anhdrase" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="AAC73237.1" /db_xref="GI:1786318" /db_xref="ASAP:ABE-0000442" /db_xref="UniProtKB/Swiss-Prot:P61517" /db_xref="EcoGene:EG12319" /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN HK" gene 142779..143705 /gene="yadG" /locus_tag="b0127" /gene_synonym="ECK0126" /gene_synonym="JW0123" /db_xref="EcoGene:EG12320" CDS 142779..143705 /gene="yadG" /locus_tag="b0127" /gene_synonym="ECK0126" /gene_synonym="JW0123" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC73238.1" /db_xref="GI:1786319" /db_xref="ASAP:ABE-0000447" /db_xref="UniProtKB/Swiss-Prot:P36879" /db_xref="EcoGene:EG12320" /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA" gene 143702..144472 /gene="yadH" /locus_tag="b0128" /gene_synonym="ECK0127" /gene_synonym="JW0124" /db_xref="EcoGene:EG12321" CDS 143702..144472 /gene="yadH" /locus_tag="b0128" /gene_synonym="ECK0127" /gene_synonym="JW0124" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC73239.1" /db_xref="GI:1786320" /db_xref="ASAP:ABE-0000450" /db_xref="UniProtKB/Swiss-Prot:P0AFN6" /db_xref="EcoGene:EG12321" /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS" gene 144577..145017 /gene="yadI" /locus_tag="b0129" /gene_synonym="agaX" /gene_synonym="ECK0128" /gene_synonym="JW0125" /db_xref="EcoGene:EG12322" CDS 144577..145017 /gene="yadI" /locus_tag="b0129" /gene_synonym="agaX" /gene_synonym="ECK0128" /gene_synonym="JW0125" /function="putative transport; Not classified" /note="putative PTS enzyme II B component; GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system" /codon_start=1 /transl_table=11 /product="putative PTS Enzyme IIA" /protein_id="AAC73240.1" /db_xref="GI:1786321" /db_xref="ASAP:ABE-0000453" /db_xref="UniProtKB/Swiss-Prot:P36881" /db_xref="EcoGene:EG12322" /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY" gene 145081..146310 /gene="yadE" /locus_tag="b0130" /gene_synonym="ECK0129" /gene_synonym="JW0126" /db_xref="EcoGene:EG11749" CDS 145081..146310 /gene="yadE" /locus_tag="b0130" /gene_synonym="ECK0129" /gene_synonym="JW0126" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative polysaccharide deacetylase lipoprotein" /protein_id="AAC73241.1" /db_xref="GI:1786322" /db_xref="ASAP:ABE-0000457" /db_xref="UniProtKB/Swiss-Prot:P31666" /db_xref="EcoGene:EG11749" /translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVT VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN QNLVTWKDTPVYNAPSAGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS ALDAQPDNGLSVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQ LEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKW NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA LAQFNPHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILR TDSLETMSRLVSNQPQG" gene complement(146314..146694) /gene="panD" /locus_tag="b0131" /gene_synonym="ECK0130" /gene_synonym="JW0127" /db_xref="EcoGene:EG11747" CDS complement(146314..146694) /gene="panD" /locus_tag="b0131" /gene_synonym="ECK0130" /gene_synonym="JW0127" /EC_number="4.1.1.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /experiment="N-terminus verified by Edman degradation: PMID 9169598" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="aspartate 1-decarboxylase" /protein_id="AAC73242.1" /db_xref="GI:1786323" /db_xref="ASAP:ABE-0000459" /db_xref="UniProtKB/Swiss-Prot:P0A790" /db_xref="EcoGene:EG11747" /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR PNVAYFEGDNEMKRTAKAIPVQVA" gene 146968..147870 /gene="yadD" /locus_tag="b0132" /gene_synonym="ECK0131" /gene_synonym="JW5010" /db_xref="EcoGene:EG11748" CDS 146968..147870 /gene="yadD" /locus_tag="b0132" /gene_synonym="ECK0131" /gene_synonym="JW5010" /codon_start=1 /transl_table=11 /product="transposase_31 family protein" /protein_id="AAC73243.1" /db_xref="GI:1786324" /db_xref="ASAP:ABE-0000463" /db_xref="UniProtKB/Swiss-Prot:P31665" /db_xref="EcoGene:EG11748" /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEVSQEFAQRLLSKG MSREDVAEMANLPLAEIDKVINLI" gene complement(147944..148795) /gene="panC" /locus_tag="b0133" /gene_synonym="ECK0132" /gene_synonym="JW0129" /db_xref="EcoGene:EG11746" CDS complement(147944..148795) /gene="panC" /locus_tag="b0133" /gene_synonym="ECK0132" /gene_synonym="JW0129" /EC_number="6.3.2.1" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="pantothenate synthetase" /protein_id="AAC73244.1" /db_xref="GI:1786325" /db_xref="ASAP:ABE-0000465" /db_xref="UniProtKB/Swiss-Prot:P31663" /db_xref="EcoGene:EG11746" /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID NKMVELA" gene complement(148807..149601) /gene="panB" /locus_tag="b0134" /gene_synonym="ECK0133" /gene_synonym="JW0130" /gene_synonym="panA" /db_xref="EcoGene:EG11675" CDS complement(148807..149601) /gene="panB" /locus_tag="b0134" /gene_synonym="ECK0133" /gene_synonym="JW0130" /gene_synonym="panA" /EC_number="2.1.2.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /experiment="N-terminus verified by Edman degradation: PMID 8096212,9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="AAC73245.1" /db_xref="GI:1786326" /db_xref="ASAP:ABE-0000467" /db_xref="UniProtKB/Swiss-Prot:P31057" /db_xref="EcoGene:EG11675" /translation="MKPTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVG DSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT VMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH" gene complement(149715..150953) /gene="yadC" /locus_tag="b0135" /gene_synonym="ECK0134" /gene_synonym="JW0131" /db_xref="EcoGene:EG11678" CDS complement(149715..150953) /gene="yadC" /locus_tag="b0135" /gene_synonym="ECK0134" /gene_synonym="JW0131" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73246.1" /db_xref="GI:1786328" /db_xref="ASAP:ABE-0000470" /db_xref="UniProtKB/Swiss-Prot:P31058" /db_xref="EcoGene:EG11678" /translation="MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAA QMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIE NAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFF FSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNY LYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSS GTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVL IEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDG NIAIEPGEFKATSTFQVTYP" gene complement(151003..151599) /gene="yadK" /locus_tag="b0136" /gene_synonym="ECK0135" /gene_synonym="JW0132" /db_xref="EcoGene:EG12325" CDS complement(151003..151599) /gene="yadK" /locus_tag="b0136" /gene_synonym="ECK0135" /gene_synonym="JW0132" /function="putative structural component; Surface structures" /note="putative fimbrial protein" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73247.1" /db_xref="GI:1786329" /db_xref="ASAP:ABE-0000472" /db_xref="UniProtKB/Swiss-Prot:P37016" /db_xref="EcoGene:EG12325" /translation="MHPTQRKLMKRIILFLSLLFCIACPAIAGQDIDLVANVKNSTCK SGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDF RALSGVMAAGSRQIFANEISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSD DMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE" gene complement(151626..152231) /gene="yadL" /locus_tag="b0137" /gene_synonym="ECK0136" /gene_synonym="JW0133" /db_xref="EcoGene:EG12326" CDS complement(151626..152231) /gene="yadL" /locus_tag="b0137" /gene_synonym="ECK0136" /gene_synonym="JW0133" /function="putative structural component; Surface structures" /note="putative fimbrial protein" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73248.1" /db_xref="GI:1786330" /db_xref="ASAP:ABE-0000475" /db_xref="UniProtKB/Swiss-Prot:P37017" /db_xref="EcoGene:EG12326" /translation="MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMG TCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKR ATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTIST AANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN" gene complement(152243..152812) /gene="yadM" /locus_tag="b0138" /gene_synonym="ECK0137" /gene_synonym="JW0134" /db_xref="EcoGene:EG12327" CDS complement(152243..152812) /gene="yadM" /locus_tag="b0138" /gene_synonym="ECK0137" /gene_synonym="JW0134" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73249.2" /db_xref="GI:87081690" /db_xref="ASAP:ABE-0000477" /db_xref="UniProtKB/Swiss-Prot:P37018" /db_xref="EcoGene:EG12327" /translation="MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLT GNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNAS SSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLE MTVALRETDAGQGVPGNFRALATFNFIYQ" gene complement(152829..155426) /gene="htrE" /locus_tag="b0139" /gene_synonym="ECK0138" /gene_synonym="JW0135" /db_xref="EcoGene:EG11972" CDS complement(152829..155426) /gene="htrE" /locus_tag="b0139" /gene_synonym="ECK0138" /gene_synonym="JW0135" /function="putative membrane; Surface structures" /note="probable outer membrane porin protein involved in fimbrial assembly; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane usher protein" /protein_id="AAC73250.1" /db_xref="GI:1786332" /db_xref="ASAP:ABE-0000479" /db_xref="UniProtKB/Swiss-Prot:P33129" /db_xref="EcoGene:EG11972" /translation="MTIEYTKNYHHLTRIATFCALLYCNTAFSAELVEYDHTFLMGQN ASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFVAIEGKKNAQACITLKNLLQ FHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNDQRLDIDVPQAWVMKN YQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKNESIYAAFNGGMNLGAWRLRASGN YNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRML PPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTI EESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNY LTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNK LFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVTV SINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVSAQRSWNE DGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQLNVSSSGYSDNAR VSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQVSLSTDGGFVL HSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRIA LDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIY DEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEKIAQSII LNGIRCQIQ" gene complement(155461..156201) /gene="yadV" /locus_tag="b0140" /gene_synonym="ECK0139" /gene_synonym="ecpD" /gene_synonym="JW0136" /db_xref="EcoGene:EG11973" CDS complement(155461..156201) /gene="yadV" /locus_tag="b0140" /gene_synonym="ECK0139" /gene_synonym="ecpD" /gene_synonym="JW0136" /function="putative factor; Surface structures" /note="probable pilin chaperone similar to PapD; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC73251.1" /db_xref="GI:1786333" /db_xref="ASAP:ABE-0000482" /db_xref="UniProtKB/Swiss-Prot:P33128" /db_xref="EcoGene:EG11973" /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNG LNGKANSAKVHFYAINDFGGAIEGNARL" gene complement(156299..156883) /gene="yadN" /locus_tag="b0141" /gene_synonym="ECK0140" /gene_synonym="JW0137" /db_xref="EcoGene:EG12328" CDS complement(156299..156883) /gene="yadN" /locus_tag="b0141" /gene_synonym="ECK0140" /gene_synonym="JW0137" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73252.1" /db_xref="GI:1786334" /db_xref="ASAP:ABE-0000487" /db_xref="UniProtKB/Swiss-Prot:P37050" /db_xref="EcoGene:EG12328" /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG SVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ" gene complement(157253..157732) /gene="folK" /locus_tag="b0142" /gene_synonym="ECK0141" /gene_synonym="JW0138" /db_xref="EcoGene:EG11374" CDS complement(157253..157732) /gene="folK" /locus_tag="b0142" /gene_synonym="ECK0141" /gene_synonym="JW0138" /EC_number="2.7.6.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase" /protein_id="AAC73253.1" /db_xref="GI:1786335" /db_xref="ASAP:ABE-0000491" /db_xref="UniProtKB/Swiss-Prot:P26281" /db_xref="EcoGene:EG11374" /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTP PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW" gene complement(157729..159126) /gene="pcnB" /locus_tag="b0143" /gene_synonym="ECK0142" /gene_synonym="JW5808" /db_xref="EcoGene:EG10690" CDS complement(157729..159126) /gene="pcnB" /locus_tag="b0143" /gene_synonym="ECK0142" /gene_synonym="JW5808" /EC_number="2.7.7.19" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="poly(A) polymerase" /protein_id="AAC73254.2" /db_xref="GI:87081691" /db_xref="ASAP:ABE-0000493" /db_xref="UniProtKB/Swiss-Prot:P0ABF1" /db_xref="EcoGene:EG10690" /translation="MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDI SENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLV GRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQR RDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAK LGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLF PTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIA QESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLL EHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRR TRRPRKRAPRREGTA" gene complement(159186..160112) /gene="gluQ" /locus_tag="b0144" /gene_synonym="ECK0143" /gene_synonym="JW5892" /gene_synonym="yadB" /db_xref="EcoGene:EG11362" CDS complement(159186..160112) /gene="gluQ" /locus_tag="b0144" /gene_synonym="ECK0143" /gene_synonym="JW5892" /gene_synonym="yadB" /EC_number="6.1.1.-" /function="putative enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="putative tRNA synthetase; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="glutamyl-Q tRNA(Asp) synthetase" /protein_id="AAC73255.3" /db_xref="GI:226510925" /db_xref="ASAP:ABE-0000497" /db_xref="UniProtKB/Swiss-Prot:P27305" /db_xref="EcoGene:EG11362" /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL HEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS VEQILQSAVKNWRLTAVPESAIVNSTFSNASC" gene complement(160149..160604) /gene="dksA" /locus_tag="b0145" /gene_synonym="ECK0144" /gene_synonym="JW0141" /gene_synonym="msmA" /db_xref="EcoGene:EG10230" CDS complement(160149..160604) /gene="dksA" /locus_tag="b0145" /gene_synonym="ECK0144" /gene_synonym="JW0141" /gene_synonym="msmA" /function="phenotype; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /note="dnaK suppressor protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="transcriptional regulator of rRNA transcription; DnaK suppressor protein" /protein_id="AAC73256.1" /db_xref="GI:1786338" /db_xref="ASAP:ABE-0000499" /db_xref="UniProtKB/Swiss-Prot:P0ABS1" /db_xref="EcoGene:EG10230" /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG" gene complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /gene_synonym="ECK0145" /gene_synonym="JW0142" /gene_synonym="sfs" /gene_synonym="sfs1" /db_xref="EcoGene:EG10949" CDS complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /gene_synonym="ECK0145" /gene_synonym="JW0142" /gene_synonym="sfs" /gene_synonym="sfs1" /function="putative regulator; Degradation of small molecules: Carbon compounds" /note="probable regulator for maltose metabolism; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="sugar fermentation stimulation protein A" /protein_id="AAC73257.1" /db_xref="GI:1786340" /db_xref="ASAP:ABE-0000503" /db_xref="UniProtKB/Swiss-Prot:P0A823" /db_xref="EcoGene:EG10949" /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC ATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE ISAEGMALKKSLPVTL" gene complement(161501..162031) /gene="ligT" /locus_tag="b0147" /gene_synonym="ECK0146" /gene_synonym="JW5011" /gene_synonym="yadP" /db_xref="EcoGene:EG12330" CDS complement(161501..162031) /gene="ligT" /locus_tag="b0147" /gene_synonym="ECK0146" /gene_synonym="JW5011" /gene_synonym="yadP" /EC_number="6.5.1.-" /function="enzyme; tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="AAC73258.2" /db_xref="GI:87081692" /db_xref="ASAP:ABE-0000505" /db_xref="UniProtKB/Swiss-Prot:P37025" /db_xref="EcoGene:EG12330" /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA RGRTRYTPLKRWALTQ" gene 162105..164534 /gene="hrpB" /locus_tag="b0148" /gene_synonym="ECK0147" /gene_synonym="JW0144" /gene_synonym="yadO" /db_xref="EcoGene:EG12329" CDS 162105..164534 /gene="hrpB" /locus_tag="b0148" /gene_synonym="ECK0147" /gene_synonym="JW0144" /gene_synonym="yadO" /function="enzyme; DNA - replication, repair, restriction/modification" /note="helicase, ATP-dependent; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase" /protein_id="AAC73259.2" /db_xref="GI:87081693" /db_xref="ASAP:ABE-0000510" /db_xref="UniProtKB/Swiss-Prot:P37024" /db_xref="EcoGene:EG12329" /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH PGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLH LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRL LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG RYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQL VQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLD IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN PTIAQGRVPLVLELLSPAQRPLQITRDLSDFWKGAYREVQKEMKGRYPKHVWPDDPAN TAPTRRTKKYS" gene 164730..167264 /gene="mrcB" /locus_tag="b0149" /gene_synonym="ECK0148" /gene_synonym="JW0145" /gene_synonym="pbpF" /gene_synonym="ponB" /db_xref="EcoGene:EG10605" CDS 164730..167264 /gene="mrcB" /locus_tag="b0149" /gene_synonym="ECK0148" /gene_synonym="JW0145" /gene_synonym="pbpF" /gene_synonym="ponB" /EC_number="2.4.1.129" /EC_number="3.4.-.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="peptidoglycan synthetase; penicillin-binding protein 1B; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0046349 - amino sugar biosynthetic process; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="fused glycosyl transferase and transpeptidase" /protein_id="AAC73260.1" /db_xref="GI:1786343" /db_xref="ASAP:ABE-0000516" /db_xref="UniProtKB/Swiss-Prot:P02919" /db_xref="EcoGene:EG10605" /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV DALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSE MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN" repeat_region 167281..167305 /note="REP12 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 167484..169727 /gene="fhuA" /locus_tag="b0150" /gene_synonym="ECK0149" /gene_synonym="JW0146" /gene_synonym="T1" /gene_synonym="tonA" /db_xref="EcoGene:EG10302" CDS 167484..169727 /gene="fhuA" /locus_tag="b0150" /gene_synonym="ECK0149" /gene_synonym="JW0146" /gene_synonym="T1" /gene_synonym="tonA" /function="membrane; Outer membrane constituents" /note="outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="ferrichrome outer membrane transporter" /protein_id="AAC73261.1" /db_xref="GI:1786344" /db_xref="ASAP:ABE-0000520" /db_xref="UniProtKB/Swiss-Prot:P06971" /db_xref="EcoGene:EG10302" /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV TAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA LSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLD DDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR FAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDT QLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDP ANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQ FTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRP IVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYT DAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVV ATATFRF" gene 169778..170575 /gene="fhuC" /locus_tag="b0151" /gene_synonym="ECK0150" /gene_synonym="JW0147" /db_xref="EcoGene:EG10304" CDS 169778..170575 /gene="fhuC" /locus_tag="b0151" /gene_synonym="ECK0150" /gene_synonym="JW0147" /function="transport; Transport of small molecules: Cations" /note="ATP-binding component of hydroxymate-dependent iron transport; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="iron(3+)-hydroxamate import ABC transporter ATPase" /protein_id="AAC73262.1" /db_xref="GI:1786345" /db_xref="ASAP:ABE-0000522" /db_xref="UniProtKB/Swiss-Prot:P07821" /db_xref="EcoGene:EG10304" /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM LVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYL VALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY" gene 170575..171465 /gene="fhuD" /locus_tag="b0152" /gene_synonym="ECK0151" /gene_synonym="JW0148" /db_xref="EcoGene:EG10305" CDS 170575..171465 /gene="fhuD" /locus_tag="b0152" /gene_synonym="ECK0151" /gene_synonym="JW0148" /function="transport; Transport of small molecules: Cations" /note="hydroxamate-dependent iron uptake, cytoplasmic membrane component; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="iron(3+)-hydroxamate import ABC transporter periplasmic binding protein" /protein_id="AAC73263.1" /db_xref="GI:1786346" /db_xref="ASAP:ABE-0000524" /db_xref="UniProtKB/Swiss-Prot:P07822" /db_xref="EcoGene:EG10305" /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW SAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG ATLSAMHFVRVLDNAIGGKA" gene 171462..173444 /gene="fhuB" /locus_tag="b0153" /gene_synonym="ECK0152" /gene_synonym="JW0149" /db_xref="EcoGene:EG10303" CDS 171462..173444 /gene="fhuB" /locus_tag="b0153" /gene_synonym="ECK0152" /gene_synonym="JW0149" /function="transport; Transport of small molecules: Cations" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="iron(3+)-hydroxamate import ABC transporter permease" /protein_id="AAC73264.1" /db_xref="GI:1786347" /db_xref="ASAP:ABE-0000526" /db_xref="UniProtKB/Swiss-Prot:P06972" /db_xref="EcoGene:EG10303" /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG ITVTTLWAIPGAMASQFAAQAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWP RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR" repeat_region 173504..173588 /note="REP13 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(173602..174882) /gene="hemL" /locus_tag="b0154" /gene_synonym="ECK0153" /gene_synonym="gsa?" /gene_synonym="JW0150" /gene_synonym="popC" /db_xref="EcoGene:EG10432" CDS complement(173602..174882) /gene="hemL" /locus_tag="b0154" /gene_synonym="ECK0153" /gene_synonym="gsa?" /gene_synonym="JW0150" /gene_synonym="popC" /EC_number="5.4.3.8" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase (aminomutase)" /protein_id="AAC73265.1" /db_xref="GI:1786349" /db_xref="ASAP:ABE-0000529" /db_xref="UniProtKB/Swiss-Prot:P23893" /db_xref="EcoGene:EG10432" /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL GQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL" gene 175107..176528 /gene="clcA" /locus_tag="b0155" /gene_synonym="ECK0154" /gene_synonym="eriC" /gene_synonym="JW5012" /gene_synonym="yadQ" /db_xref="EcoGene:EG12331" CDS 175107..176528 /gene="clcA" /locus_tag="b0155" /gene_synonym="ECK0154" /gene_synonym="eriC" /gene_synonym="JW5012" /gene_synonym="yadQ" /function="transport; Not classified" /note="putative channel transporter" /codon_start=1 /transl_table=11 /product="H(+)/Cl(-) exchange transporter" /protein_id="AAC73266.1" /db_xref="GI:1786350" /db_xref="ASAP:ABE-0000533" /db_xref="UniProtKB/Swiss-Prot:P37019" /db_xref="EcoGene:EG12331" /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA RTLAKQEAEQLARSKAASASENT" gene 176610..176954 /gene="erpA" /locus_tag="b0156" /gene_synonym="ECK0155" /gene_synonym="JW0152" /gene_synonym="yadR" /db_xref="EcoGene:EG12332" CDS 176610..176954 /gene="erpA" /locus_tag="b0156" /gene_synonym="ECK0155" /gene_synonym="JW0152" /gene_synonym="yadR" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster insertion protein" /protein_id="AAC73267.1" /db_xref="GI:1786351" /db_xref="ASAP:ABE-0000538" /db_xref="UniProtKB/Swiss-Prot:P0ACC3" /db_xref="EcoGene:EG12332" /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA KSTCGCGSSFSI" repeat_region 176969..176987 /note="REP14 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(177001..177624) /gene="yadS" /locus_tag="b0157" /gene_synonym="ECK0156" /gene_synonym="JW0153" /db_xref="EcoGene:EG12333" CDS complement(177001..177624) /gene="yadS" /locus_tag="b0157" /gene_synonym="ECK0156" /gene_synonym="JW0153" /codon_start=1 /transl_table=11 /product="UPF0126 family inner membrane protein" /protein_id="AAC73268.1" /db_xref="GI:1786352" /db_xref="ASAP:ABE-0000540" /db_xref="UniProtKB/Swiss-Prot:P0AFP0" /db_xref="EcoGene:EG12333" /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR" gene complement(177662..178462) /gene="btuF" /locus_tag="b0158" /gene_synonym="ECK0157" /gene_synonym="JW0154" /gene_synonym="yadT" /db_xref="EcoGene:EG12334" CDS complement(177662..178462) /gene="btuF" /locus_tag="b0158" /gene_synonym="ECK0157" /gene_synonym="JW0154" /gene_synonym="yadT" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="vitamin B12 ABC transporter periplasmic binding protein" /protein_id="AAC73269.1" /db_xref="GI:1786353" /db_xref="ASAP:ABE-0000542" /db_xref="UniProtKB/Swiss-Prot:P37028" /db_xref="EcoGene:EG12334" /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD" gene complement(178455..179153) /gene="mtn" /locus_tag="b0159" /gene_synonym="ECK0158" /gene_synonym="JW0155" /gene_synonym="mtnN" /gene_synonym="pfs" /gene_synonym="yadA" /db_xref="EcoGene:EG11090" CDS complement(178455..179153) /gene="mtn" /locus_tag="b0159" /gene_synonym="ECK0158" /gene_synonym="JW0155" /gene_synonym="mtnN" /gene_synonym="pfs" /gene_synonym="yadA" /EC_number="3.2.2.16" /EC_number="3.2.2.9" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /protein_id="AAC73270.1" /db_xref="GI:1786354" /db_xref="ASAP:ABE-0000545" /db_xref="UniProtKB/Swiss-Prot:P0AF12" /db_xref="EcoGene:EG11090" /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS SLMVESLVQKLAHG" gene 179237..180754 /gene="dgt" /locus_tag="b0160" /gene_synonym="ECK0159" /gene_synonym="JW0156" /gene_synonym="optA" /db_xref="EcoGene:EG10225" CDS 179237..180754 /gene="dgt" /locus_tag="b0160" /gene_synonym="ECK0159" /gene_synonym="JW0156" /gene_synonym="optA" /EC_number="3.1.5.1" /function="enzyme; Central intermediary metabolism: Nucleotide hydrolysis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="deoxyguanosine triphosphate triphosphohydrolase" /protein_id="AAC73271.1" /db_xref="GI:1786355" /db_xref="ASAP:ABE-0000548" /db_xref="UniProtKB/Swiss-Prot:P15723" /db_xref="EcoGene:EG10225" /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDEL TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS HPDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ" gene 180884..182308 /gene="degP" /locus_tag="b0161" /gene_synonym="ECK0160" /gene_synonym="htrA" /gene_synonym="JW0157" /gene_synonym="ptd" /db_xref="EcoGene:EG10463" CDS 180884..182308 /gene="degP" /locus_tag="b0161" /gene_synonym="ECK0160" /gene_synonym="htrA" /gene_synonym="JW0157" /gene_synonym="ptd" /EC_number="3.4.21.-" /function="enzyme; Degradation of proteins, peptides, glycopeptides" /note="periplasmic serine protease Do; heat shock protein HtrA; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="serine endoprotease (protease Do), membrane-associated" /protein_id="AAC73272.1" /db_xref="GI:1786356" /db_xref="ASAP:ABE-0000551" /db_xref="UniProtKB/Swiss-Prot:P0C0V0" /db_xref="EcoGene:EG10463" /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV LDSKPSVLALNIQRGDSTIYLLMQ" gene 182463..183620 /gene="cdaR" /locus_tag="b0162" /gene_synonym="ECK0161" /gene_synonym="JW5013" /gene_synonym="sdaR" /gene_synonym="yaeG" /db_xref="EcoGene:EG12335" CDS 182463..183620 /gene="cdaR" /locus_tag="b0162" /gene_synonym="ECK0161" /gene_synonym="JW5013" /gene_synonym="sdaR" /gene_synonym="yaeG" /function="regulator; Not classified" /codon_start=1 /transl_table=11 /product="carbohydrate diacid regulon transcriptional regulator; autoregulator" /protein_id="AAC73273.2" /db_xref="GI:87081694" /db_xref="ASAP:ABE-0000554" /db_xref="UniProtKB/Swiss-Prot:P37047" /db_xref="EcoGene:EG12335" /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS FGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHN VQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER" gene complement(183709..184095) /gene="yaeH" /locus_tag="b0163" /gene_synonym="ECK0162" /gene_synonym="JW0159" /db_xref="EcoGene:EG12336" CDS complement(183709..184095) /gene="yaeH" /locus_tag="b0163" /gene_synonym="ECK0162" /gene_synonym="JW0159" /function="putative structure; Not classified" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="UPF0325 family protein" /protein_id="AAC73274.1" /db_xref="GI:1786359" /db_xref="ASAP:ABE-0000556" /db_xref="UniProtKB/Swiss-Prot:P62768" /db_xref="EcoGene:EG12336" /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD DLRHLESVVTNKISEIEADLEKLTRK" gene complement(184257..185069) /gene="yaeI" /locus_tag="b0164" /gene_synonym="ECK0163" /gene_synonym="JW5014" /db_xref="EcoGene:EG12337" CDS complement(184257..185069) /gene="yaeI" /locus_tag="b0164" /gene_synonym="ECK0163" /gene_synonym="JW5014" /codon_start=1 /transl_table=11 /product="phosphodiesterase with model substrate bis-pNPP" /protein_id="AAC73275.2" /db_xref="GI:87081695" /db_xref="ASAP:ABE-0000559" /db_xref="UniProtKB/Swiss-Prot:P37049" /db_xref="EcoGene:EG12337" /translation="MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKD NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFS DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFE LVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV" gene complement(185123..185947) /gene="dapD" /locus_tag="b0166" /gene_synonym="ECK0164" /gene_synonym="JW0161" /gene_synonym="ssa" /db_xref="EcoGene:EG10207" CDS complement(185123..185947) /gene="dapD" /locus_tag="b0166" /gene_synonym="ECK0164" /gene_synonym="JW0161" /gene_synonym="ssa" /EC_number="2.3.1.117" /function="enzyme; Amino acid biosynthesis: Lysine" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" /protein_id="AAC73277.1" /db_xref="GI:1786362" /db_xref="ASAP:ABE-0000565" /db_xref="UniProtKB/Swiss-Prot:P0A9D8" /db_xref="EcoGene:EG10207" /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID" gene complement(185978..188650) /gene="glnD" /locus_tag="b0167" /gene_synonym="ECK0165" /gene_synonym="JW0162" /db_xref="EcoGene:EG11411" CDS complement(185978..188650) /gene="glnD" /locus_tag="b0167" /gene_synonym="ECK0165" /gene_synonym="JW0162" /EC_number="2.7.7.59" /function="enzyme; Amino acid biosynthesis: Glutamine" /note="protein PII; uridylyltransferase acts on regulator of glnA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006542 - glutamine biosynthetic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="uridylyltransferase" /protein_id="AAC73278.1" /db_xref="GI:1786363" /db_xref="ASAP:ABE-0000568" /db_xref="UniProtKB/Swiss-Prot:P27249" /db_xref="EcoGene:EG11411" /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP LSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVHNSAITGI YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI FTTRDGMAMDTFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED LFIIATADRRALNNELQQEVHQRLTEALNPNDKG" gene complement(188712..189506) /gene="map" /locus_tag="b0168" /gene_synonym="ECK0166" /gene_synonym="JW0163" /gene_synonym="pepM" /db_xref="EcoGene:EG10570" CDS complement(188712..189506) /gene="map" /locus_tag="b0168" /gene_synonym="ECK0166" /gene_synonym="JW0163" /gene_synonym="pepM" /EC_number="3.4.11.18" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="AAC73279.1" /db_xref="GI:1786364" /db_xref="ASAP:ABE-0000571" /db_xref="UniProtKB/Swiss-Prot:P0AE18" /db_xref="EcoGene:EG10570" /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE" gene 189712..189847 /gene="tff" /locus_tag="b4414" /gene_synonym="ECK0167" /gene_synonym="JWR0225" /gene_synonym="t44" /db_xref="EcoGene:EG31135" ncRNA 189712..189847 /ncRNA_class="other" /gene="tff" /locus_tag="b4414" /gene_synonym="ECK0167" /gene_synonym="JWR0225" /gene_synonym="t44" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047239" /db_xref="EcoGene:EG31135" gene 189874..190599 /gene="rpsB" /locus_tag="b0169" /gene_synonym="ECK0168" /gene_synonym="JW0164" /db_xref="EcoGene:EG10901" CDS 189874..190599 /gene="rpsB" /locus_tag="b0169" /gene_synonym="ECK0168" /gene_synonym="JW0164" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S2" /protein_id="AAC73280.1" /db_xref="GI:1786365" /db_xref="ASAP:ABE-0000575" /db_xref="UniProtKB/Swiss-Prot:P0A7V0" /db_xref="EcoGene:EG10901" /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT NWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA ATVREGRSQDLASQAEESFVEAE" gene 190857..191708 /gene="tsf" /locus_tag="b0170" /gene_synonym="ECK0169" /gene_synonym="JW0165" /db_xref="EcoGene:EG11033" CDS 190857..191708 /gene="tsf" /locus_tag="b0170" /gene_synonym="ECK0169" /gene_synonym="JW0165" /function="factor; Proteins - translation and modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="translation elongation factor EF-Ts" /protein_id="AAC73281.1" /db_xref="GI:1786366" /db_xref="ASAP:ABE-0000579" /db_xref="UniProtKB/Swiss-Prot:P0A6P1" /db_xref="EcoGene:EG11033" /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV AAMSKQS" gene 191855..192580 /gene="pyrH" /locus_tag="b0171" /gene_synonym="ECK0170" /gene_synonym="JW0166" /gene_synonym="smbA" /gene_synonym="umk" /db_xref="EcoGene:EG11539" CDS 191855..192580 /gene="pyrH" /locus_tag="b0171" /gene_synonym="ECK0170" /gene_synonym="JW0166" /gene_synonym="smbA" /gene_synonym="umk" /EC_number="2.7.4.-" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="AAC73282.1" /db_xref="GI:1786367" /db_xref="ASAP:ABE-0000582" /db_xref="UniProtKB/Swiss-Prot:P0A7E9" /db_xref="EcoGene:EG11539" /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF NMNKPGALRRVVMGEKEGTLITE" gene 192872..193429 /gene="frr" /locus_tag="b0172" /gene_synonym="ECK0171" /gene_synonym="JW0167" /gene_synonym="rrf" /db_xref="EcoGene:EG10335" CDS 192872..193429 /gene="frr" /locus_tag="b0172" /gene_synonym="ECK0171" /gene_synonym="JW0167" /gene_synonym="rrf" /function="factor; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 2684966,8740179,9298646" /note="ribosome releasing factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation; GO_process: GO:0009386 - translational attenuation" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /protein_id="AAC73283.1" /db_xref="GI:1786368" /db_xref="ASAP:ABE-0000588" /db_xref="UniProtKB/Swiss-Prot:P0A805" /db_xref="EcoGene:EG10335" /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF" gene 193521..194717 /gene="dxr" /locus_tag="b0173" /gene_synonym="ECK0172" /gene_synonym="ispC" /gene_synonym="JW0168" /gene_synonym="yaeM" /db_xref="EcoGene:EG12715" CDS 193521..194717 /gene="dxr" /locus_tag="b0173" /gene_synonym="ECK0172" /gene_synonym="ispC" /gene_synonym="JW0168" /gene_synonym="yaeM" /EC_number="1.1.1.267" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="AAC73284.1" /db_xref="GI:1786369" /db_xref="ASAP:ABE-0000592" /db_xref="UniProtKB/Swiss-Prot:P45568" /db_xref="EcoGene:EG12715" /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE VMRLAS" gene 194903..195664 /gene="ispU" /locus_tag="b0174" /gene_synonym="ECK0173" /gene_synonym="JW0169" /gene_synonym="rth" /gene_synonym="uppS" /gene_synonym="yaeS" /db_xref="EcoGene:EG13329" CDS 194903..195664 /gene="ispU" /locus_tag="b0174" /gene_synonym="ECK0173" /gene_synonym="JW0169" /gene_synonym="rth" /gene_synonym="uppS" /gene_synonym="yaeS" /EC_number="2.5.1.31" /experiment="N-terminus verified by Edman degradation: PMID 9882662" /note="undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate synthase" /protein_id="AAC73285.1" /db_xref="GI:1786371" /db_xref="ASAP:ABE-0000595" /db_xref="UniProtKB/Swiss-Prot:P60472" /db_xref="EcoGene:EG13329" /translation="MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHK AGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHR HNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAE KVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTD VLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA" gene 195677..196534 /gene="cdsA" /locus_tag="b0175" /gene_synonym="ECK0174" /gene_synonym="JW5810" /db_xref="EcoGene:EG10139" CDS 195677..196534 /gene="cdsA" /locus_tag="b0175" /gene_synonym="ECK0174" /gene_synonym="JW5810" /EC_number="2.7.7.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="CDP-diglyceride synthetase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="CDP-diglyceride synthase" /protein_id="AAC73286.2" /db_xref="GI:87081696" /db_xref="ASAP:ABE-0000600" /db_xref="UniProtKB/Swiss-Prot:P0ABG1" /db_xref="EcoGene:EG10139" /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLL VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFRTL" gene 196546..197898 /gene="rseP" /locus_tag="b0176" /gene_synonym="ecfE" /gene_synonym="ECK0175" /gene_synonym="JW0171" /gene_synonym="yaeL" /db_xref="EcoGene:EG12436" CDS 196546..197898 /gene="rseP" /locus_tag="b0176" /gene_synonym="ecfE" /gene_synonym="ECK0175" /gene_synonym="JW0171" /gene_synonym="yaeL" /EC_number="3.4.24.-" /codon_start=1 /transl_table=11 /product="inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease" /protein_id="AAC73287.1" /db_xref="GI:1786373" /db_xref="ASAP:ABE-0000603" /db_xref="UniProtKB/Swiss-Prot:P0AEH1" /db_xref="EcoGene:EG12436" /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL " gene 197928..200360 /gene="bamA" /locus_tag="b0177" /gene_synonym="ecfK" /gene_synonym="ECK0176" /gene_synonym="JW0172" /gene_synonym="omp85" /gene_synonym="yaeT" /gene_synonym="yzzN" /gene_synonym="yzzY" /db_xref="EcoGene:EG12676" CDS 197928..200360 /gene="bamA" /locus_tag="b0177" /gene_synonym="ecfK" /gene_synonym="ECK0176" /gene_synonym="JW0172" /gene_synonym="omp85" /gene_synonym="yaeT" /gene_synonym="yzzN" /gene_synonym="yzzY" /note="putative outer membrane antigen; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor" /protein_id="AAC73288.1" /db_xref="GI:1786374" /db_xref="ASAP:ABE-0000605" /db_xref="UniProtKB/Swiss-Prot:P0A940" /db_xref="EcoGene:EG12676" /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK AEQFQFNIGKTW" gene 200482..200967 /gene="skp" /locus_tag="b0178" /gene_synonym="ECK0177" /gene_synonym="hlpA" /gene_synonym="JW0173" /gene_synonym="ompH" /db_xref="EcoGene:EG10455" CDS 200482..200967 /gene="skp" /locus_tag="b0178" /gene_synonym="ECK0177" /gene_synonym="hlpA" /gene_synonym="JW0173" /gene_synonym="ompH" /function="factor; Basic proteins - synthesis, modification" /note="periplasmic molecular chaperone for outer membrane proteins; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="periplasmic chaperone" /protein_id="AAC73289.1" /db_xref="GI:1786375" /db_xref="ASAP:ABE-0000608" /db_xref="UniProtKB/Swiss-Prot:P0AEU7" /db_xref="EcoGene:EG10455" /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV K" gene 200971..201996 /gene="lpxD" /locus_tag="b0179" /gene_synonym="ECK0178" /gene_synonym="firA" /gene_synonym="JW0174" /gene_synonym="omsA" /gene_synonym="ssc" /db_xref="EcoGene:EG10316" CDS 200971..201996 /gene="lpxD" /locus_tag="b0179" /gene_synonym="ECK0178" /gene_synonym="firA" /gene_synonym="JW0174" /gene_synonym="omsA" /gene_synonym="ssc" /EC_number="2.3.1.-" /function="enzyme; Surface polysaccharides & antigens" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase" /protein_id="AAC73290.1" /db_xref="GI:1786376" /db_xref="ASAP:ABE-0000610" /db_xref="UniProtKB/Swiss-Prot:P21645" /db_xref="EcoGene:EG10316" /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG ALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE RKVNQQD" gene 202101..202556 /gene="fabZ" /locus_tag="b0180" /gene_synonym="ECK0179" /gene_synonym="JW0175" /gene_synonym="sabA" /gene_synonym="sefA" /gene_synonym="sfhC" /gene_synonym="yaeA" /db_xref="EcoGene:EG11284" CDS 202101..202556 /gene="fabZ" /locus_tag="b0180" /gene_synonym="ECK0179" /gene_synonym="JW0175" /gene_synonym="sabA" /gene_synonym="sefA" /gene_synonym="sfhC" /gene_synonym="yaeA" /EC_number="4.2.1.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="(3R)-hydroxymyristol acyl carrier protein dehydratase" /protein_id="AAC73291.1" /db_xref="GI:1786377" /db_xref="ASAP:ABE-0000613" /db_xref="UniProtKB/Swiss-Prot:P0A6Q6" /db_xref="EcoGene:EG11284" /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA" gene 202560..203348 /gene="lpxA" /locus_tag="b0181" /gene_synonym="ECK0180" /gene_synonym="JW0176" /db_xref="EcoGene:EG10545" CDS 202560..203348 /gene="lpxA" /locus_tag="b0181" /gene_synonym="ECK0180" /gene_synonym="JW0176" /EC_number="2.3.1.129" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 8366124" /note="UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine acetyltransferase" /protein_id="AAC73292.1" /db_xref="GI:1786378" /db_xref="ASAP:ABE-0000618" /db_xref="UniProtKB/Swiss-Prot:P0A722" /db_xref="EcoGene:EG10545" /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR" gene 203348..204496 /gene="lpxB" /locus_tag="b0182" /gene_synonym="ECK0181" /gene_synonym="JW0177" /gene_synonym="pgsB" /db_xref="EcoGene:EG10546" CDS 203348..204496 /gene="lpxB" /locus_tag="b0182" /gene_synonym="ECK0181" /gene_synonym="JW0177" /gene_synonym="pgsB" /EC_number="2.4.1.182" /function="enzyme; Macromolecule metabolism: Lipopolysaccharide" /experiment="N-terminus verified by Edman degradation: PMID 3049593" /note="tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide-1-P synthase" /protein_id="AAC73293.1" /db_xref="GI:1786379" /db_xref="ASAP:ABE-0000620" /db_xref="UniProtKB/Swiss-Prot:P10441" /db_xref="EcoGene:EG10546" /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGP RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ" gene 204493..205089 /gene="rnhB" /locus_tag="b0183" /gene_synonym="ECK0182" /gene_synonym="JW0178" /db_xref="EcoGene:EG10861" CDS 204493..205089 /gene="rnhB" /locus_tag="b0183" /gene_synonym="ECK0182" /gene_synonym="JW0178" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2172991" /note="RNAse HII, degrades RNA of DNA-RNA hybrids; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="ribonuclease HII, degrades RNA of DNA-RNA hybrids" /protein_id="AAC73294.1" /db_xref="GI:1786380" /db_xref="ASAP:ABE-0000622" /db_xref="UniProtKB/Swiss-Prot:P10442" /db_xref="EcoGene:EG10861" /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS" gene 205126..208608 /gene="dnaE" /locus_tag="b0184" /gene_synonym="ECK0183" /gene_synonym="JW0179" /gene_synonym="polC" /gene_synonym="sdgC" /db_xref="EcoGene:EG10238" CDS 205126..208608 /gene="dnaE" /locus_tag="b0184" /gene_synonym="ECK0183" /gene_synonym="JW0179" /gene_synonym="polC" /gene_synonym="sdgC" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA polymerase III, alpha subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III alpha subunit" /protein_id="AAC73295.1" /db_xref="GI:1786381" /db_xref="ASAP:ABE-0000624" /db_xref="UniProtKB/Swiss-Prot:P10443" /db_xref="EcoGene:EG10238" /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQ MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL RGLIGSEQVELEFD" gene 208621..209580 /gene="accA" /locus_tag="b0185" /gene_synonym="ECK0184" /gene_synonym="JW0180" /db_xref="EcoGene:EG11647" CDS 208621..209580 /gene="accA" /locus_tag="b0185" /gene_synonym="ECK0184" /gene_synonym="JW0180" /EC_number="6.4.1.2" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="acetylCoA carboxylase, carboxytransferase component, alpha subunit; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, carboxytransferase, alpha subunit" /protein_id="AAC73296.1" /db_xref="GI:1786382" /db_xref="ASAP:ABE-0000630" /db_xref="UniProtKB/Swiss-Prot:P0ABD5" /db_xref="EcoGene:EG11647" /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA" gene 209679..211820 /gene="ldcC" /locus_tag="b0186" /gene_synonym="ECK0185" /gene_synonym="JW0181" /gene_synonym="ldc" /gene_synonym="LDC2" /gene_synonym="ldcH" /db_xref="EcoGene:EG13219" CDS 209679..211820 /gene="ldcC" /locus_tag="b0186" /gene_synonym="ECK0185" /gene_synonym="JW0181" /gene_synonym="ldc" /gene_synonym="LDC2" /gene_synonym="ldcH" /EC_number="4.1.1.18" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /experiment="N-terminus verified by Edman degradation: PMID 9226257,9339543" /note="GO_process: GO:0006096 - glycolysis; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="lysine decarboxylase 2, constitutive" /protein_id="AAC73297.1" /db_xref="GI:1786384" /db_xref="ASAP:ABE-0000633" /db_xref="UniProtKB/Swiss-Prot:P52095" /db_xref="EcoGene:EG13219" /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF FEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF FDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAW QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG" gene 211877..212266 /gene="yaeR" /locus_tag="b0187" /gene_synonym="ECK0186" /gene_synonym="JW0182" /db_xref="EcoGene:EG13224" CDS 211877..212266 /gene="yaeR" /locus_tag="b0187" /gene_synonym="ECK0186" /gene_synonym="JW0182" /codon_start=1 /transl_table=11 /product="putative lyase" /protein_id="AAC73298.2" /db_xref="GI:87081697" /db_xref="ASAP:ABE-0000635" /db_xref="UniProtKB/Swiss-Prot:P52096" /db_xref="EcoGene:EG13224" /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCET IRVDPYTQKRFTFFNDPDGLPLELYEQ" gene 212331..213629 /gene="tilS" /locus_tag="b0188" /gene_synonym="ECK0187" /gene_synonym="JW0183" /gene_synonym="mesJ" /gene_synonym="yaeN" /db_xref="EcoGene:EG13220" CDS 212331..213629 /gene="tilS" /locus_tag="b0188" /gene_synonym="ECK0187" /gene_synonym="JW0183" /gene_synonym="mesJ" /gene_synonym="yaeN" /EC_number="6.1.1.5" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA(Ile)-lysidine synthetase" /protein_id="AAC73299.1" /db_xref="GI:1786386" /db_xref="ASAP:ABE-0000638" /db_xref="UniProtKB/Swiss-Prot:P52097" /db_xref="EcoGene:EG13220" /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVAL RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR GELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE QESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPA GLGSVQLNAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRD TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS" repeat_region 213632..213668 /note="REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(213678..213932) /gene="rof" /locus_tag="b0189" /gene_synonym="ECK0188" /gene_synonym="JW0184" /gene_synonym="mesJ" /gene_synonym="yaeO" /db_xref="EcoGene:EG13221" CDS complement(213678..213932) /gene="rof" /locus_tag="b0189" /gene_synonym="ECK0188" /gene_synonym="JW0184" /gene_synonym="mesJ" /gene_synonym="yaeO" /experiment="N-terminus verified by Edman degradation: PMID 10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="modulator of Rho-dependent transcription termination" /protein_id="AAC73300.2" /db_xref="GI:87081698" /db_xref="ASAP:ABE-0000641" /db_xref="UniProtKB/Swiss-Prot:P0AFW8" /db_xref="EcoGene:EG13221" /translation="MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLV SRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES" gene complement(213925..214125) /gene="yaeP" /locus_tag="b4406" /gene_synonym="ECK0189" /gene_synonym="JW0185" /db_xref="EcoGene:EG13222" CDS complement(213925..214125) /gene="yaeP" /locus_tag="b4406" /gene_synonym="ECK0189" /gene_synonym="JW0185" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="UPF0253 family protein" /protein_id="AAT48124.1" /db_xref="GI:48994876" /db_xref="ASAP:ABE-0047214" /db_xref="UniProtKB/Swiss-Prot:P0A8K5" /db_xref="EcoGene:EG13222" /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS EAVREKAAYAAANLLVSDYVNE" gene 214291..214836 /gene="yaeQ" /locus_tag="b0190" /gene_synonym="ECK0190" /gene_synonym="JW0186" /db_xref="EcoGene:EG13223" CDS 214291..214836 /gene="yaeQ" /locus_tag="b0190" /gene_synonym="ECK0190" /gene_synonym="JW0186" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="PDDEXK superfamily protein" /protein_id="AAC73301.1" /db_xref="GI:1786388" /db_xref="ASAP:ABE-0000648" /db_xref="UniProtKB/Swiss-Prot:P0AA97" /db_xref="EcoGene:EG13223" /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV IWLSDDKNNLEVNLTAWQQPS" gene 214833..215255 /gene="arfB" /locus_tag="b0191" /gene_synonym="ECK0191" /gene_synonym="JW0187" /gene_synonym="yaeJ" /db_xref="EcoGene:EG12354" CDS 214833..215255 /gene="arfB" /locus_tag="b0191" /gene_synonym="ECK0191" /gene_synonym="JW0187" /gene_synonym="yaeJ" /codon_start=1 /transl_table=11 /product="alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached" /protein_id="AAC73302.1" /db_xref="GI:1786389" /db_xref="ASAP:ABE-0000650" /db_xref="UniProtKB/Swiss-Prot:P40711" /db_xref="EcoGene:EG12354" /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEK KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE" gene 215269..215979 /gene="nlpE" /locus_tag="b0192" /gene_synonym="cutF" /gene_synonym="ECK0192" /gene_synonym="JW0188" /db_xref="EcoGene:EG12137" CDS 215269..215979 /gene="nlpE" /locus_tag="b0192" /gene_synonym="cutF" /gene_synonym="ECK0192" /gene_synonym="JW0188" /function="putative transport; Detoxification" /note="copper homeostasis protein (lipoprotein); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="lipoprotein involved with copper homeostasis and adhesion" /protein_id="AAC73303.1" /db_xref="GI:1786390" /db_xref="ASAP:ABE-0000652" /db_xref="UniProtKB/Swiss-Prot:P40710" /db_xref="EcoGene:EG12137" /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAA TFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLA PDTAGKFYPNQDCSSLGQ" repeat_region 216027..216137 /note="RIP16 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(216179..217003) /gene="yaeF" /locus_tag="b0193" /gene_synonym="ECK0193" /gene_synonym="JW5016" /gene_synonym="yaeK" /db_xref="EcoGene:EG12138" CDS complement(216179..217003) /gene="yaeF" /locus_tag="b0193" /gene_synonym="ECK0193" /gene_synonym="JW5016" /gene_synonym="yaeK" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="AAC73304.2" /db_xref="GI:87081699" /db_xref="ASAP:ABE-0000655" /db_xref="UniProtKB/Swiss-Prot:P37056" /db_xref="EcoGene:EG12138" /translation="MDKPKAYCRLFLPSFLLLSACTVDISQPDPSATAVDAEAKTWAV KFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNN VAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIV EFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKA GHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTR" gene complement(217057..218775) /gene="proS" /locus_tag="b0194" /gene_synonym="drpA" /gene_synonym="ECK0194" /gene_synonym="JW0190" /db_xref="EcoGene:EG10770" CDS complement(217057..218775) /gene="proS" /locus_tag="b0194" /gene_synonym="drpA" /gene_synonym="ECK0194" /gene_synonym="JW0190" /EC_number="6.1.1.15" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2203971,9298646" /note="proline tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="AAC73305.1" /db_xref="GI:1786392" /db_xref="ASAP:ABE-0000657" /db_xref="UniProtKB/Swiss-Prot:P16659" /db_xref="EcoGene:EG10770" /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK TVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA GDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL VKQIKG" gene complement(218887..219594) /gene="tsaA" /locus_tag="b0195" /gene_synonym="ECK0195" /gene_synonym="JW0191" /gene_synonym="yaeB" /db_xref="EcoGene:EG11503" CDS complement(218887..219594) /gene="tsaA" /locus_tag="b0195" /gene_synonym="ECK0195" /gene_synonym="JW0191" /gene_synonym="yaeB" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent" /protein_id="AAC73306.1" /db_xref="GI:1786393" /db_xref="ASAP:ABE-0000661" /db_xref="UniProtKB/Swiss-Prot:P28634" /db_xref="EcoGene:EG11503" /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV RWRVTDAGFEVFALEPR" gene complement(219591..219995) /gene="rcsF" /locus_tag="b0196" /gene_synonym="ECK0196" /gene_synonym="JW0192" /db_xref="EcoGene:EG11502" CDS complement(219591..219995) /gene="rcsF" /locus_tag="b0196" /gene_synonym="ECK0196" /gene_synonym="JW0192" /function="regulator; Surface polysaccharides & antigens" /note="regulator in colanic acid synthesis; interacts with RcsB; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC73307.1" /db_xref="GI:1786394" /db_xref="ASAP:ABE-0000663" /db_xref="UniProtKB/Swiss-Prot:P69411" /db_xref="EcoGene:EG11502" /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK" gene complement(220113..220928) /gene="metQ" /locus_tag="b0197" /gene_synonym="ECK0197" /gene_synonym="JW0193" /gene_synonym="metD" /gene_synonym="yaeC" /db_xref="EcoGene:EG11504" CDS complement(220113..220928) /gene="metQ" /locus_tag="b0197" /gene_synonym="ECK0197" /gene_synonym="JW0193" /gene_synonym="metD" /gene_synonym="yaeC" /function="transport; Transport of small molecules: Amino acids, amines" /note="D-methionine transport protein (ABC superfamily, peri_bind); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="AAC73308.1" /db_xref="GI:1786396" /db_xref="ASAP:ABE-0000666" /db_xref="UniProtKB/Swiss-Prot:P28635" /db_xref="EcoGene:EG11504" /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI FVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW" gene complement(220968..221621) /gene="metI" /locus_tag="b0198" /gene_synonym="ECK0198" /gene_synonym="JW0194" /gene_synonym="metD" /gene_synonym="yaeE" /db_xref="EcoGene:EG11737" CDS complement(220968..221621) /gene="metI" /locus_tag="b0198" /gene_synonym="ECK0198" /gene_synonym="JW0194" /gene_synonym="metD" /gene_synonym="yaeE" /function="transport; Transport of small molecules: Amino acids, amines" /note="D- and L-methionine transport protein (ABC superfamily, membrane); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="AAC73309.1" /db_xref="GI:1786397" /db_xref="ASAP:ABE-0000668" /db_xref="UniProtKB/Swiss-Prot:P31547" /db_xref="EcoGene:EG11737" /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK" gene complement(221614..222645) /gene="metN" /locus_tag="b0199" /gene_synonym="abc" /gene_synonym="ECK0199" /gene_synonym="JW0195" /gene_synonym="metD" /db_xref="EcoGene:EG11621" CDS complement(221614..222645) /gene="metN" /locus_tag="b0199" /gene_synonym="abc" /gene_synonym="ECK0199" /gene_synonym="JW0195" /gene_synonym="metD" /function="transport; Transport of small molecules: Amino acids, amines" /note="D- and L-methionine transport protein (ABC superfamily, atp_bind); GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DL-methionine transporter subunit" /protein_id="AAC73310.1" /db_xref="GI:1786398" /db_xref="ASAP:ABE-0000671" /db_xref="UniProtKB/Swiss-Prot:P30750" /db_xref="EcoGene:EG11621" /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN VALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH VKVEVLGYV" gene 222833..223408 /gene="gmhB" /locus_tag="b0200" /gene_synonym="ECK0200" /gene_synonym="gmbC" /gene_synonym="gmbX" /gene_synonym="gmhX" /gene_synonym="JW0196" /gene_synonym="wcbN" /gene_synonym="yaeD" /db_xref="EcoGene:EG11736" CDS 222833..223408 /gene="gmhB" /locus_tag="b0200" /gene_synonym="ECK0200" /gene_synonym="gmbC" /gene_synonym="gmbX" /gene_synonym="gmhX" /gene_synonym="JW0196" /gene_synonym="wcbN" /gene_synonym="yaeD" /function="enzyme; Surface polysaccharides and antigens" /codon_start=1 /transl_table=11 /product="D,D-heptose 1,7-bisphosphate phosphatase" /protein_id="AAC73311.1" /db_xref="GI:1786399" /db_xref="ASAP:ABE-0000675" /db_xref="UniProtKB/Swiss-Prot:P63228" /db_xref="EcoGene:EG11736" /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP ITPEAENAADWVLNSLADLPQAIKKQQKPAQ" gene 223771..225312 /gene="rrsH" /locus_tag="b0201" /gene_synonym="ECK0201" /gene_synonym="JWR0001" /db_xref="EcoGene:EG30090" rRNA 223771..225312 /gene="rrsH" /locus_tag="b0201" /gene_synonym="ECK0201" /gene_synonym="JWR0001" /product="16S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000677" /db_xref="EcoGene:EG30090" gene 225381..225457 /gene="ileV" /locus_tag="b0202" /gene_synonym="ECK0202" /gene_synonym="JWR0002" /db_xref="EcoGene:EG30045" tRNA 225381..225457 /gene="ileV" /locus_tag="b0202" /gene_synonym="ECK0202" /gene_synonym="JWR0002" /product="tRNA-Ile" /note="anticodon: GAU" /db_xref="ASAP:ABE-0000679" /db_xref="EcoGene:EG30045" gene 225500..225575 /gene="alaV" /locus_tag="b0203" /gene_synonym="ECK0203" /gene_synonym="JWR0003" /db_xref="EcoGene:EG30010" tRNA 225500..225575 /gene="alaV" /locus_tag="b0203" /gene_synonym="ECK0203" /gene_synonym="JWR0003" /product="tRNA-Ala" /note="anticodon: UGC" /db_xref="ASAP:ABE-0000682" /db_xref="EcoGene:EG30010" gene 225759..228662 /gene="rrlH" /locus_tag="b0204" /gene_synonym="ECK0204" /gene_synonym="JWR0004" /db_xref="EcoGene:EG30083" rRNA 225759..228662 /gene="rrlH" /locus_tag="b0204" /gene_synonym="ECK0204" /gene_synonym="JWR0004" /product="23S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000684" /db_xref="EcoGene:EG30083" gene 228756..228875 /gene="rrfH" /locus_tag="b0205" /gene_synonym="ECK0205" /gene_synonym="JWR0005" /db_xref="EcoGene:EG30076" rRNA 228756..228875 /gene="rrfH" /locus_tag="b0205" /gene_synonym="ECK0205" /gene_synonym="JWR0005" /product="5S ribosomal RNA of rrnH operon" /db_xref="ASAP:ABE-0000686" /db_xref="EcoGene:EG30076" gene 228928..229004 /gene="aspU" /locus_tag="b0206" /gene_synonym="ECK0206" /gene_synonym="JWR0006" /db_xref="EcoGene:EG30024" tRNA 228928..229004 /gene="aspU" /locus_tag="b0206" /gene_synonym="ECK0206" /gene_synonym="JWR0006" /product="tRNA-Asp" /note="anticodon: GUC" /db_xref="ASAP:ABE-0000688" /db_xref="EcoGene:EG30024" gene 229167..229970 /gene="dkgB" /locus_tag="b0207" /gene_synonym="ECK0207" /gene_synonym="JW0197" /gene_synonym="yafB" /db_xref="EcoGene:EG11648" CDS 229167..229970 /gene="dkgB" /locus_tag="b0207" /gene_synonym="ECK0207" /gene_synonym="JW0197" /gene_synonym="yafB" /EC_number="1.1.1.274" /function="putative enzyme; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconate reductase B" /protein_id="AAC73312.1" /db_xref="GI:1786400" /db_xref="ASAP:ABE-0000692" /db_xref="UniProtKB/Swiss-Prot:P30863" /db_xref="EcoGene:EG11648" /translation="MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAA VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSV IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD" gene complement(229967..230881) /gene="yafC" /locus_tag="b0208" /gene_synonym="ECK0208" /gene_synonym="JW0198" /db_xref="EcoGene:EG11649" CDS complement(229967..230881) /gene="yafC" /locus_tag="b0208" /gene_synonym="ECK0208" /gene_synonym="JW0198" /function="putative transport; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC73313.1" /db_xref="GI:1786401" /db_xref="ASAP:ABE-0000694" /db_xref="UniProtKB/Swiss-Prot:P30864" /db_xref="EcoGene:EG11649" /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF NSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGL SSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDR AVSTRIRAFIDFLSEHVKTAPGGAVREA" gene 231122..231922 /gene="yafD" /locus_tag="b0209" /gene_synonym="ECK0209" /gene_synonym="JW5017" /db_xref="EcoGene:EG11650" CDS 231122..231922 /gene="yafD" /locus_tag="b0209" /gene_synonym="ECK0209" /gene_synonym="JW5017" /codon_start=1 /transl_table=11 /product="endo/exonuclease/phosphatase family protein" /protein_id="AAC73314.1" /db_xref="GI:1786403" /db_xref="ASAP:ABE-0000700" /db_xref="UniProtKB/Swiss-Prot:P0A8U2" /db_xref="EcoGene:EG11650" /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK" gene 231926..232549 /gene="yafE" /locus_tag="b0210" /gene_synonym="ECK0210" /gene_synonym="JW0200" /db_xref="EcoGene:EG11651" CDS 231926..232549 /gene="yafE" /locus_tag="b0210" /gene_synonym="ECK0210" /gene_synonym="JW0200" /function="putative enzyme; Not classified" /note="putative biotin synthesis protein; GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="putative S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="AAC73315.1" /db_xref="GI:1786404" /db_xref="ASAP:ABE-0000702" /db_xref="UniProtKB/Swiss-Prot:P30866" /db_xref="EcoGene:EG11651" /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN ITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP GHPVRDIWLQTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVAR MRTPEALVDAIRIYQQSASTEVRTYFALQNDGFFTSDIIMVDAHKAA" gene complement(232597..233955) /gene="mltD" /locus_tag="b0211" /gene_synonym="dniR" /gene_synonym="ECK0211" /gene_synonym="JW5018" /gene_synonym="yafG" /db_xref="EcoGene:EG10246" CDS complement(232597..233955) /gene="mltD" /locus_tag="b0211" /gene_synonym="dniR" /gene_synonym="ECK0211" /gene_synonym="JW5018" /gene_synonym="yafG" /EC_number="3.2.1.-" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative membrane-bound lytic murein transglycosylase D" /protein_id="AAC73316.1" /db_xref="GI:1786405" /db_xref="ASAP:ABE-0000704" /db_xref="UniProtKB/Swiss-Prot:P0AEZ7" /db_xref="EcoGene:EG10246" /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAD NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP DS" gene complement(234027..234782) /gene="gloB" /locus_tag="b0212" /gene_synonym="ECK0212" /gene_synonym="JW0202" /gene_synonym="yafR" /db_xref="EcoGene:EG13330" CDS complement(234027..234782) /gene="gloB" /locus_tag="b0212" /gene_synonym="ECK0212" /gene_synonym="JW0202" /gene_synonym="yafR" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="probable hydroxyacylglutathione hydrolase; GO_process: GO:0009438 - methylglyoxal metabolic process" /codon_start=1 /transl_table=11 /product="hydroxyacylglutathione hydrolase" /protein_id="AAC73317.1" /db_xref="GI:1786406" /db_xref="ASAP:ABE-0000707" /db_xref="UniProtKB/Swiss-Prot:P0AC84" /db_xref="EcoGene:EG13330" /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR TEDIDLINVINEETLLQQPEERFAWLRSKKDRF" gene 234816..235538 /gene="yafS" /locus_tag="b0213" /gene_synonym="ECK0213" /gene_synonym="JW0203" /db_xref="EcoGene:EG13331" CDS 234816..235538 /gene="yafS" /locus_tag="b0213" /gene_synonym="ECK0213" /gene_synonym="JW0203" /codon_start=1 /transl_table=11 /product="putative S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="AAC73318.2" /db_xref="GI:87081700" /db_xref="ASAP:ABE-0000713" /db_xref="UniProtKB/Swiss-Prot:P75672" /db_xref="EcoGene:EG13331" /translation="MKPARVPQTVVAPDCWGDLPWGKLYRKALERQLNPWFTKMYGFH LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW CTDPHRLLREADRVLIDDGWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMFTLMRQL DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ SKNKPRIRQAVGATRQCRKPQA" gene complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /gene_synonym="cer" /gene_synonym="dasF" /gene_synonym="ECK0214" /gene_synonym="herA" /gene_synonym="JW0204" /gene_synonym="rnh" /gene_synonym="sdrA" /gene_synonym="sin" /db_xref="EcoGene:EG10860" CDS complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /gene_synonym="cer" /gene_synonym="dasF" /gene_synonym="ECK0214" /gene_synonym="herA" /gene_synonym="JW0204" /gene_synonym="rnh" /gene_synonym="sdrA" /gene_synonym="sin" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2171503" /note="RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006508 - proteolysis" /codon_start=1 /transl_table=11 /product="ribonuclease HI, degrades RNA of DNA-RNA hybrids" /protein_id="AAC73319.1" /db_xref="GI:1786408" /db_xref="ASAP:ABE-0000717" /db_xref="UniProtKB/Swiss-Prot:P0A7Y4" /db_xref="EcoGene:EG10860" /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV" gene 236067..236798 /gene="dnaQ" /locus_tag="b0215" /gene_synonym="ECK0215" /gene_synonym="JW0205" /gene_synonym="mutD" /db_xref="EcoGene:EG10243" CDS 236067..236798 /gene="dnaQ" /locus_tag="b0215" /gene_synonym="ECK0215" /gene_synonym="JW0205" /gene_synonym="mutD" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA polymerase III, epsilon subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="DNA polymerase III epsilon subunit" /protein_id="AAC73320.1" /db_xref="GI:1786409" /db_xref="ASAP:ABE-0000722" /db_xref="UniProtKB/Swiss-Prot:P03007" /db_xref="EcoGene:EG10243" /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT DEEIAAHEARLDLVQKKGGSCLWRA" gene 236931..237007 /gene="aspV" /locus_tag="b0216" /gene_synonym="ECK0216" /gene_synonym="JWR0007" /db_xref="EcoGene:EG30025" tRNA 236931..237007 /gene="aspV" /locus_tag="b0216" /gene_synonym="ECK0216" /gene_synonym="JWR0007" /product="tRNA-Asp" /note="anticodon: GUC" /db_xref="ASAP:ABE-0000724" /db_xref="EcoGene:EG30025" gene 237335..238120 /gene="yafT" /locus_tag="b0217" /gene_synonym="ECK0217" /gene_synonym="JW0206" /db_xref="EcoGene:EG13332" CDS 237335..238120 /gene="yafT" /locus_tag="b0217" /gene_synonym="ECK0217" /gene_synonym="JW0206" /function="putative enzyme; Not classified" /note="putative aminopeptidase" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC73321.1" /db_xref="GI:1786410" /db_xref="ASAP:ABE-0000727" /db_xref="UniProtKB/Swiss-Prot:P77339" /db_xref="EcoGene:EG13332" /translation="MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTP QQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMR KYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV YQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYE YKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ" gene complement(238257..238736) /gene="ykfM" /locus_tag="b4586" /gene_synonym="ECK4397" /db_xref="EcoGene:EG14451" CDS complement(238257..238736) /gene="ykfM" /locus_tag="b4586" /gene_synonym="ECK4397" /codon_start=1 /transl_table=11 /product="lethality reduction protein, putative inner membrane protein" /protein_id="ABP93434.1" /db_xref="GI:145693093" /db_xref="UniProtKB/Swiss-Prot:A5A605" /db_xref="EcoGene:EG14451" /translation="MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCST EIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLL IAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK" gene complement(238746..239102) /gene="yafU" /locus_tag="b0218" /gene_synonym="ECK0218" /gene_synonym="JW0207" /pseudo /db_xref="EcoGene:EG13333" CDS complement(238746..239102) /gene="yafU" /locus_tag="b0218" /gene_synonym="ECK0218" /gene_synonym="JW0207" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000729" /db_xref="UniProtKB/Swiss-Prot:P77354" /db_xref="EcoGene:EG13333" gene 239106..239378 /gene="yafF" /locus_tag="b4503" /gene_synonym="ECK0219" /gene_synonym="JW0208" /pseudo /db_xref="EcoGene:EG11772" CDS 239106..239378 /gene="yafF" /locus_tag="b4503" /gene_synonym="ECK0219" /gene_synonym="JW0208" /note="pseudogene, H repeat-associated protein; GO_component: GO:0005737 - cytoplasm" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285024" /db_xref="UniProtKB/Swiss-Prot:Q2EEP9" /db_xref="EcoGene:EG11772" gene complement(239419..240189) /gene="yafV" /locus_tag="b0219" /gene_synonym="ECK0220" /gene_synonym="JW5019" /db_xref="EcoGene:EG13334" CDS complement(239419..240189) /gene="yafV" /locus_tag="b0219" /gene_synonym="ECK0220" /gene_synonym="JW5019" /function="putative enzyme; Not classified" /note="putative EC 3.5. amidase-type enzyme" /codon_start=1 /transl_table=11 /product="putative NAD(P)-binding C-N hydrolase family amidase" /protein_id="AAC73323.1" /db_xref="GI:1786412" /db_xref="ASAP:ABE-0000734" /db_xref="UniProtKB/Swiss-Prot:Q47679" /db_xref="EcoGene:EG13334" /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA TADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW" gene 240343..240816 /gene="ivy" /locus_tag="b0220" /gene_synonym="ECK0221" /gene_synonym="JW0210" /gene_synonym="ykfE" /db_xref="EcoGene:EG13547" CDS 240343..240816 /gene="ivy" /locus_tag="b0220" /gene_synonym="ECK0221" /gene_synonym="JW0210" /gene_synonym="ykfE" /note="inhibitor of vertebrate C-type lysozyme, periplasmic" /codon_start=1 /transl_table=11 /product="inhibitor of c-type lysozyme, periplasmic" /protein_id="AAC73324.1" /db_xref="GI:1786413" /db_xref="ASAP:ABE-0000740" /db_xref="UniProtKB/Swiss-Prot:P0AD59" /db_xref="EcoGene:EG13547" /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK" gene complement(240859..243303) /gene="fadE" /locus_tag="b0221" /gene_synonym="ECK0222" /gene_synonym="fadF" /gene_synonym="JW5020" /gene_synonym="yafH" /db_xref="EcoGene:EG13145" CDS complement(240859..243303) /gene="fadE" /locus_tag="b0221" /gene_synonym="ECK0222" /gene_synonym="fadF" /gene_synonym="JW5020" /gene_synonym="yafH" /EC_number="1.3.99.-" /function="putative enzyme; Not classified" /note="GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acyl coenzyme A dehydrogenase" /protein_id="AAC73325.2" /db_xref="GI:87081702" /db_xref="ASAP:ABE-0000743" /db_xref="UniProtKB/Swiss-Prot:Q47146" /db_xref="EcoGene:EG13145" /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK EHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT DEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWN KRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP FQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI VKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMI FGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSST PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAV LKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRH YLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQ RICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELA TKPVKLPEKVRKVEAA" gene 243543..244121 /gene="gmhA" /locus_tag="b0222" /gene_synonym="ECK0223" /gene_synonym="isn" /gene_synonym="JW0212" /gene_synonym="lpcA" /gene_synonym="tfrA" /gene_synonym="yafI" /db_xref="EcoGene:EG13146" CDS 243543..244121 /gene="gmhA" /locus_tag="b0222" /gene_synonym="ECK0223" /gene_synonym="isn" /gene_synonym="JW0212" /gene_synonym="lpcA" /gene_synonym="tfrA" /gene_synonym="yafI" /EC_number="5.-.-.-" /function="enzyme; Surface polysaccharides & antigens" /note="phosphoheptose isomerase; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process" /codon_start=1 /transl_table=11 /product="D-sedoheptulose 7-phosphate isomerase" /protein_id="AAC73326.1" /db_xref="GI:1786416" /db_xref="ASAP:ABE-0000751" /db_xref="UniProtKB/Swiss-Prot:P63224" /db_xref="EcoGene:EG13146" /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK" repeat_region 244129..244263 /note="REP17 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene 244327..245094 /gene="yafJ" /locus_tag="b0223" /gene_synonym="ECK0224" /gene_synonym="JW0213" /db_xref="EcoGene:EG13147" CDS 244327..245094 /gene="yafJ" /locus_tag="b0223" /gene_synonym="ECK0224" /gene_synonym="JW0213" /function="putative enzyme; Not classified" /note="putative amidotransferase" /codon_start=1 /transl_table=11 /product="type 2 glutamine amidotransferase family protein" /protein_id="AAC73327.1" /db_xref="GI:1786417" /db_xref="ASAP:ABE-0000755" /db_xref="UniProtKB/Swiss-Prot:Q47147" /db_xref="EcoGene:EG13147" /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV" gene complement(245065..245805) /gene="yafK" /locus_tag="b0224" /gene_synonym="ECK0225" /gene_synonym="JW0214" /db_xref="EcoGene:EG13148" CDS complement(245065..245805) /gene="yafK" /locus_tag="b0224" /gene_synonym="ECK0225" /gene_synonym="JW0214" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase-related protein" /protein_id="AAC73328.1" /db_xref="GI:1786418" /db_xref="ASAP:ABE-0000757" /db_xref="UniProtKB/Swiss-Prot:P0AA99" /db_xref="EcoGene:EG13148" /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN GRYVVSKPLSHEVVQPQLASNYTLPEAK" gene complement(245961..246239) /gene="yafQ" /locus_tag="b0225" /gene_synonym="ECK0226" /gene_synonym="JW0215" /db_xref="EcoGene:EG13154" CDS complement(245961..246239) /gene="yafQ" /locus_tag="b0225" /gene_synonym="ECK0226" /gene_synonym="JW0215" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ" /protein_id="AAC73329.1" /db_xref="GI:1786419" /db_xref="ASAP:ABE-0000761" /db_xref="UniProtKB/Swiss-Prot:Q47149" /db_xref="EcoGene:EG13154" /translation="MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLP AVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG" gene complement(246242..246502) /gene="dinJ" /locus_tag="b0226" /gene_synonym="ECK0227" /gene_synonym="JW0216" /gene_synonym="sosA" /db_xref="EcoGene:EG13142" CDS complement(246242..246502) /gene="dinJ" /locus_tag="b0226" /gene_synonym="ECK0227" /gene_synonym="JW0216" /gene_synonym="sosA" /function="phenotype; Not classified" /note="damage-inducible protein J; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="antitoxin of YafQ-DinJ toxin-antitoxin system" /protein_id="AAC73330.1" /db_xref="GI:1786420" /db_xref="ASAP:ABE-0000764" /db_xref="UniProtKB/Swiss-Prot:Q47150" /db_xref="EcoGene:EG13142" /translation="MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVARE KALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI" gene 246712..247461 /gene="yafL" /locus_tag="b0227" /gene_synonym="ECK0228" /gene_synonym="JW0217" /db_xref="EcoGene:EG13149" CDS 246712..247461 /gene="yafL" /locus_tag="b0227" /gene_synonym="ECK0228" /gene_synonym="JW0217" /function="putative membrane; Not classified" /note="putative lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative lipoprotein and C40 family peptidase" /protein_id="AAC73331.1" /db_xref="GI:1786421" /db_xref="ASAP:ABE-0000775" /db_xref="UniProtKB/Swiss-Prot:Q47151" /db_xref="EcoGene:EG13149" /translation="MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQN RARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQA LAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILE AKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRT GETIRISRLAEPFWQDHFLGARRILTEETIL" repeat_region 247458..247541 /note="REP18 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 247637..248134 /gene="rayT" /locus_tag="b0228" /gene_synonym="ECK0229" /gene_synonym="JW0218" /gene_synonym="tnpAREP" /gene_synonym="yafM" /db_xref="EcoGene:EG13150" CDS 247637..248134 /gene="rayT" /locus_tag="b0228" /gene_synonym="ECK0229" /gene_synonym="JW0218" /gene_synonym="tnpAREP" /gene_synonym="yafM" /codon_start=1 /transl_table=11 /product="RAYT REP element-mobilizing transposase; TnpA(REP)" /protein_id="AAC73332.1" /db_xref="GI:1786422" /db_xref="ASAP:ABE-0000779" /db_xref="UniProtKB/Swiss-Prot:Q47152" /db_xref="EcoGene:EG13150" /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKR DRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA IRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAG ERIIS" repeat_region 248147..248334 /note="REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(248358..250070) /gene="lfhA" /locus_tag="b0229" /gene_synonym="ECK0230" /gene_synonym="fhiA" /gene_synonym="JW5811" /pseudo /db_xref="EcoGene:EG13144" CDS complement(248358..250070) /gene="lfhA" /locus_tag="b0229" /gene_synonym="ECK0230" /gene_synonym="fhiA" /gene_synonym="JW5811" /note="pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000782" /db_xref="UniProtKB/Swiss-Prot:Q47153" /db_xref="EcoGene:EG13144" gene 250072..250827 /gene="lafU" /locus_tag="b0230" /gene_synonym="ECK0231" /gene_synonym="JW5812" /gene_synonym="mbhA" /pseudo /db_xref="EcoGene:EG13143" CDS 250072..250827 /gene="lafU" /locus_tag="b0230" /gene_synonym="ECK0231" /gene_synonym="JW5812" /gene_synonym="mbhA" /note="pseudogene, lateral flagellar motor protein fragment; GO_process: GO:0042330 - taxis" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000785" /db_xref="UniProtKB/Swiss-Prot:Q47154" /db_xref="EcoGene:EG13143" gene 250898..251953 /gene="dinB" /locus_tag="b0231" /gene_synonym="dinP" /gene_synonym="ECK0232" /gene_synonym="JW0221" /db_xref="EcoGene:EG13141" CDS 250898..251953 /gene="dinB" /locus_tag="b0231" /gene_synonym="dinP" /gene_synonym="ECK0232" /gene_synonym="JW0221" /EC_number="2.7.7.7" /note="DNA polymerase IV; DNA polymerase IV, devoid of proofreading, damage-inducible protein P; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="AAC73335.1" /db_xref="GI:1786425" /db_xref="ASAP:ABE-0000789" /db_xref="UniProtKB/Swiss-Prot:Q47155" /db_xref="EcoGene:EG13141" /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG QFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKF GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL HVTLLDPQMERQLVLGL" gene 252005..252298 /gene="yafN" /locus_tag="b0232" /gene_synonym="ECK0233" /gene_synonym="JW0222" /db_xref="EcoGene:EG13151" CDS 252005..252298 /gene="yafN" /locus_tag="b0232" /gene_synonym="ECK0233" /gene_synonym="JW0222" /codon_start=1 /transl_table=11 /product="antitoxin of the YafO-YafN toxin-antitoxin system" /protein_id="AAC73336.1" /db_xref="GI:1786426" /db_xref="ASAP:ABE-0000793" /db_xref="UniProtKB/Swiss-Prot:Q47156" /db_xref="EcoGene:EG13151" /translation="MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSAS AFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE" gene 252301..252699 /gene="yafO" /locus_tag="b0233" /gene_synonym="ECK0234" /gene_synonym="JW0223" /db_xref="EcoGene:EG13152" CDS 252301..252699 /gene="yafO" /locus_tag="b0233" /gene_synonym="ECK0234" /gene_synonym="JW0223" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin of the YafO-YafN toxin-antitoxin system" /protein_id="AAC73337.1" /db_xref="GI:1786427" /db_xref="ASAP:ABE-0000795" /db_xref="UniProtKB/Swiss-Prot:Q47157" /db_xref="EcoGene:EG13152" /translation="MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALY DDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIA ILKPEPHKLARDNNQMHKIGKMAEAFRMRF" gene 252709..253161 /gene="yafP" /locus_tag="b0234" /gene_synonym="ECK0235" /gene_synonym="JW0224" /db_xref="EcoGene:EG13153" CDS 252709..253161 /gene="yafP" /locus_tag="b0234" /gene_synonym="ECK0235" /gene_synonym="JW0224" /codon_start=1 /transl_table=11 /product="GNAT family putative N-acetyltransferase" /protein_id="AAC73338.1" /db_xref="GI:1786428" /db_xref="ASAP:ABE-0000801" /db_xref="UniProtKB/Swiss-Prot:Q47158" /db_xref="EcoGene:EG13153" /translation="MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQI DESRWKEKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPLIK SESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH" gene 253479..253685 /gene="ykfJ" /locus_tag="b0235" /gene_synonym="ECK0236" /gene_synonym="JW0225" /pseudo /db_xref="EcoGene:EG14368" CDS 253479..253685 /gene="ykfJ" /locus_tag="b0235" /gene_synonym="ECK0236" /gene_synonym="JW0225" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000805" /db_xref="UniProtKB/Swiss-Prot:P75675" /db_xref="EcoGene:EG14368" gene 253702..254202 /gene="prfH" /locus_tag="b0236" /gene_synonym="ECK0237" /gene_synonym="JW0226" /pseudo /db_xref="EcoGene:EG11496" CDS 253702..254202 /gene="prfH" /locus_tag="b0236" /gene_synonym="ECK0237" /gene_synonym="JW0226" /note="pseudogene, RF-1 domain family; probable peptide chain release factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0000807" /db_xref="UniProtKB/Swiss-Prot:P28369" /db_xref="EcoGene:EG11496" repeat_region 254217..254244 /note="REP20 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(254259..255716) /gene="pepD" /locus_tag="b0237" /gene_synonym="ECK0238" /gene_synonym="JW0227" /gene_synonym="pepH" /db_xref="EcoGene:EG10695" CDS complement(254259..255716) /gene="pepD" /locus_tag="b0237" /gene_synonym="ECK0238" /gene_synonym="JW0227" /gene_synonym="pepH" /EC_number="3.4.13.18" /function="enzyme; Degradation of proteins, peptides, glyco" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="aminoacyl-histidine dipeptidase (peptidase D)" /protein_id="AAC73341.1" /db_xref="GI:1786432" /db_xref="ASAP:ABE-0000809" /db_xref="UniProtKB/Swiss-Prot:P15288" /db_xref="EcoGene:EG10695" /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWL QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVL KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK" gene 256841..257650 /gene="mhpD" /locus_tag="b0350" /gene_synonym="ECK0347" /gene_synonym="JW0341" /gene_synonym="mhpS" /db_xref="EcoGene:EG14274" CDS 256841..257650 /gene="mhpD" /locus_tag="b0350" /gene_synonym="ECK0347" /gene_synonym="JW0341" /gene_synonym="mhpS" /EC_number="4.2.1.80" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase" /protein_id="AAC73453.2" /db_xref="GI:87081722" /db_xref="ASAP:ABE-0001205" /db_xref="UniProtKB/Swiss-Prot:P77608" /db_xref="EcoGene:EG14274" /translation="MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHI NVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQP RIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNAS CGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASL GEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS" gene 257647..258597 /gene="mhpF" /locus_tag="b0351" /gene_synonym="ECK0348" /gene_synonym="JW0342" /db_xref="EcoGene:EG13625" CDS 257647..258597 /gene="mhpF" /locus_tag="b0351" /gene_synonym="ECK0348" /gene_synonym="JW0342" /EC_number="1.2.1.10" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="acetaldehyde dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acetaldehyde-CoA dehydrogenase II, NAD-binding" /protein_id="AAC73454.1" /db_xref="GI:1786547" /db_xref="ASAP:ABE-0001207" /db_xref="UniProtKB/Swiss-Prot:P77580" /db_xref="EcoGene:EG13625" /translation="MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGL ARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDL TPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIAS KSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEAS QDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEV EGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAGEAA" gene 258594..259607 /gene="mhpE" /locus_tag="b0352" /gene_synonym="ECK0349" /gene_synonym="JW0343" /db_xref="EcoGene:EG13292" CDS 258594..259607 /gene="mhpE" /locus_tag="b0352" /gene_synonym="ECK0349" /gene_synonym="JW0343" /EC_number="4.1.3.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="4-hydroxy-2-ketovalerate aldolase; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I" /protein_id="AAC73455.1" /db_xref="GI:1786548" /db_xref="ASAP:ABE-0001209" /db_xref="UniProtKB/Swiss-Prot:P51020" /db_xref="EcoGene:EG13292" /translation="MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSI EVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQA GARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGA TCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCD RIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVD RETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLR NNK" repeat_region 259656..260091 /note="REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences" gene 260185..261396 /gene="mhpT" /locus_tag="b0353" /gene_synonym="ECK0350" /gene_synonym="JW5046" /gene_synonym="yaiK" /db_xref="EcoGene:EG13293" CDS 260185..261396 /gene="mhpT" /locus_tag="b0353" /gene_synonym="ECK0350" /gene_synonym="JW5046" /gene_synonym="yaiK" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="3-hydroxyphenylpropionic transporter" /protein_id="AAC73456.2" /db_xref="GI:87081723" /db_xref="ASAP:ABE-0001213" /db_xref="UniProtKB/Swiss-Prot:P77589" /db_xref="EcoGene:EG13293" /translation="MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQA FALDKMQMGWIFSAGILGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWD FPSLVFARLMTGVGLGAALPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGF AGANLAWQTVFWVGGVVPLILVPLLMRWLPESAVFAGEKQSAPPLRALFAPETATATL LLWLCYFFTLLVVYMLINWLPLLLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDK LRPVTMSLLIYSGMLASLLALGTVSSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSS QIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASAPGILVAGLAVFILMS RRSRIQPCADA" gene 261498..262037 /gene="yaiL" /locus_tag="b0354" /gene_synonym="ECK0351" /gene_synonym="JW0345" /db_xref="EcoGene:EG13294" CDS 261498..262037 /gene="yaiL" /locus_tag="b0354" /gene_synonym="ECK0351" /gene_synonym="JW0345" /function="putative enzyme; Not classified" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DUF2058 family protein" /protein_id="AAC73457.2" /db_xref="GI:87081724" /db_xref="ASAP:ABE-0001216" /db_xref="UniProtKB/Swiss-Prot:P51024" /db_xref="EcoGene:EG13294" /translation="MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEE NKKAQLERDKQLSEQQKQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKI FVDKLTQAQLINGRLAIARLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAE EQDEDDPYADFKVPDDLMW" repeat_region 262061..262247 /note="REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(262261..263094) /gene="frmB" /locus_tag="b0355" /gene_synonym="ECK0352" /gene_synonym="JW0346" /gene_synonym="yaiM" /db_xref="EcoGene:EG13295" CDS complement(262261..263094) /gene="frmB" /locus_tag="b0355" /gene_synonym="ECK0352" /gene_synonym="JW0346" /gene_synonym="yaiM" /function="enzyme; Formaldehyde degradation" /note="putative S-formylglutathione hydrolase" /codon_start=1 /transl_table=11 /product="S-formylglutathione hydrolase" /protein_id="AAC73458.1" /db_xref="GI:1786551" /db_xref="ASAP:ABE-0001219" /db_xref="UniProtKB/Swiss-Prot:P51025" /db_xref="EcoGene:EG13295" /translation="MELIEKHVSFGGWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLP VLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGF YLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQG LSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNM R" gene complement(263188..264297) /gene="frmA" /locus_tag="b0356" /gene_synonym="adhC" /gene_synonym="ECK0353" /gene_synonym="JW0347" /db_xref="EcoGene:EG50010" CDS complement(263188..264297) /gene="frmA" /locus_tag="b0356" /gene_synonym="adhC" /gene_synonym="ECK0353" /gene_synonym="JW0347" /EC_number="1.1.1.1" /EC_number="1.1.1.284" /function="enzyme; Energy metabolism, carbon: Fermentation" /experiment="N-terminus verified by Edman degradation: PMID 1731906" /note="alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase" /protein_id="AAC73459.1" /db_xref="GI:1786552" /db_xref="ASAP:ABE-0001221" /db_xref="UniProtKB/Swiss-Prot:P25437" /db_xref="EcoGene:EG50010" /translation="MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDA FTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGK TNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEAN HEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID TNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALES AHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGD IDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY" gene complement(264332..264607) /gene="frmR" /locus_tag="b0357" /gene_synonym="ECK0354" /gene_synonym="JW0348" /gene_synonym="yaiN" /db_xref="EcoGene:EG13296" CDS complement(264332..264607) /gene="frmR" /locus_tag="b0357" /gene_synonym="ECK0354" /gene_synonym="JW0348" /gene_synonym="yaiN" /note="repressor of frmRAB" /codon_start=1 /transl_table=11 /product="regulator protein that represses frmRAB operon" /protein_id="AAC73460.2" /db_xref="GI:87081725" /db_xref="ASAP:ABE-0001226" /db_xref="UniProtKB/Swiss-Prot:P0AAP3" /db_xref="EcoGene:EG13296" /translation="MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAA VRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK" gene complement(264795..265568) /gene="yaiO" /locus_tag="b0358" /gene_synonym="ECK0355" /gene_synonym="JW0349" /db_xref="EcoGene:EG13297" CDS complement(264795..265568) /gene="yaiO" /locus_tag="b0358" /gene_synonym="ECK0355" /gene_synonym="JW0349" /codon_start=1 /transl_table=11 /product="outer membrane protein" /protein_id="AAC73461.1" /db_xref="GI:1786555" /db_xref="ASAP:ABE-0001230" /db_xref="UniProtKB/Swiss-Prot:Q47534" /db_xref="EcoGene:EG13297" /translation="MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAY AELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTP VFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTH YDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQR IQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF" gene complement(join(265570..265986,267317..267598)) /gene="yaiX" /locus_tag="b4579" /gene_synonym="ECK0356" /gene_synonym="JW0350" /gene_synonym="yaiF" /pseudo /db_xref="EcoGene:EG14236" CDS complement(join(265570..265986,267317..267598)) /gene="yaiX" /locus_tag="b4579" /gene_synonym="ECK0356" /gene_synonym="JW0350" /gene_synonym="yaiF" /note="pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001232" /db_xref="ASAP:ABE-0001241" /db_xref="ASAP:ABE-0285111" /db_xref="UniProtKB/Swiss-Prot:P75697" /db_xref="EcoGene:EG14236" mobile_element 265986..267316 /mobile_element_type="insertion sequence:IS2A" gene 266077..266442 /gene="insC1" /locus_tag="b0360" /gene_synonym="ECK0357" /db_xref="EcoGene:EG40003" CDS 266077..266442 /gene="insC1" /locus_tag="b0360" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="AAC73463.2" /db_xref="GI:145693097" /db_xref="ASAP:ABE-0001237" /db_xref="UniProtKB/Swiss-Prot:P0CF40" /db_xref="EcoGene:EG40003" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" gene 266400..267305 /gene="insD1" /locus_tag="b0361" /gene_synonym="ECK0358" /db_xref="EcoGene:EG40004" CDS 266400..267305 /gene="insD1" /locus_tag="b0361" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="AAC73464.1" /db_xref="GI:1786558" /db_xref="ASAP:ABE-0001239" /db_xref="UniProtKB/Swiss-Prot:P0CF53" /db_xref="EcoGene:EG40004" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(267465..268661) /gene="yaiP" /locus_tag="b0363" /gene_synonym="ECK0360" /gene_synonym="JW0355" /db_xref="EcoGene:EG13298" CDS complement(267465..268661) /gene="yaiP" /locus_tag="b0363" /gene_synonym="ECK0360" /gene_synonym="JW0355" /function="putative enzyme; Not classified" /note="polysaccharide metabolism; GO_process: GO:0000271 - polysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="putative family 2 glycosyltransferase" /protein_id="AAC73466.1" /db_xref="GI:1786560" /db_xref="ASAP:ABE-0001243" /db_xref="UniProtKB/Swiss-Prot:Q47536" /db_xref="EcoGene:EG13298" /translation="MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPC LAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALM NGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHI RATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTL VANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIF PMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLL VPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGT EKLSEA" gene complement(268785..269342) /gene="yaiS" /locus_tag="b0364" /gene_synonym="ECK0361" /gene_synonym="JW0356" /db_xref="EcoGene:EG13302" CDS complement(268785..269342) /gene="yaiS" /locus_tag="b0364" /gene_synonym="ECK0361" /gene_synonym="JW0356" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative PIG-L family deacetylase" /protein_id="AAC73467.2" /db_xref="GI:87081726" /db_xref="ASAP:ABE-0001249" /db_xref="UniProtKB/Swiss-Prot:P71311" /db_xref="EcoGene:EG13302" /translation="MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKG IYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISAL EDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSF MPQVFESVKEEYFTVKLAALKKHKS" gene 269958..270920 /gene="tauA" /locus_tag="b0365" /gene_synonym="ECK0362" /gene_synonym="JW0357" /gene_synonym="ssiA" /gene_synonym="yaiR" /db_xref="EcoGene:EG13300" CDS 269958..270920 /gene="tauA" /locus_tag="b0365" /gene_synonym="ECK0362" /gene_synonym="JW0357" /gene_synonym="ssiA" /gene_synonym="yaiR" /function="transport; Transport of small molecules: Amino acids, amines" /note="taurine transport system periplasmic protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="taurine ABC transporter periplasmic binding protein" /protein_id="AAC73468.2" /db_xref="GI:87081727" /db_xref="ASAP:ABE-0001256" /db_xref="UniProtKB/Swiss-Prot:Q47537" /db_xref="EcoGene:EG13300" /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNT FAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP EVVKAFAKSAIDAQQPYIANPDVWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ QQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ" gene 270933..271700 /gene="tauB" /locus_tag="b0366" /gene_synonym="ECK0363" /gene_synonym="JW0358" /gene_synonym="ssiB" /gene_synonym="yaiQ" /db_xref="EcoGene:EG13299" CDS 270933..271700 /gene="tauB" /locus_tag="b0366" /gene_synonym="ECK0363" /gene_synonym="JW0358" /gene_synonym="ssiB" /gene_synonym="yaiQ" /function="transport; Transport of small molecules: Amino acids, amines" /note="taurine ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="taurine ABC transporter ATPase" /protein_id="AAC73469.1" /db_xref="GI:1786563" /db_xref="ASAP:ABE-0001259" /db_xref="UniProtKB/Swiss-Prot:Q47538" /db_xref="EcoGene:EG13299" /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK MQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS" gene 271697..272524 /gene="tauC" /locus_tag="b0367" /gene_synonym="ECK0364" /gene_synonym="JW0359" /gene_synonym="ssiC" /gene_synonym="yaiJ" /db_xref="EcoGene:EG13301" CDS 271697..272524 /gene="tauC" /locus_tag="b0367" /gene_synonym="ECK0364" /gene_synonym="JW0359" /gene_synonym="ssiC" /gene_synonym="yaiJ" /function="transport; Transport of small molecules: Amino acids, amines" /note="taurine transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="taurine ABC transporter permease" /protein_id="AAC73470.1" /db_xref="GI:1786564" /db_xref="ASAP:ABE-0001261" /db_xref="UniProtKB/Swiss-Prot:Q47539" /db_xref="EcoGene:EG13301" /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATL QLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFAAVLFGIPVG IAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS ALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ" gene 272521..273372 /gene="tauD" /locus_tag="b0368" /gene_synonym="ECK0365" /gene_synonym="JW0360" /gene_synonym="ssiD" /gene_synonym="yaiG" /db_xref="EcoGene:EG12423" CDS 272521..273372 /gene="tauD" /locus_tag="b0368" /gene_synonym="ECK0365" /gene_synonym="JW0360" /gene_synonym="ssiD" /gene_synonym="yaiG" /EC_number="1.14.11.17" /function="putative enzyme; Not classified" /note="GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="taurine dioxygenase, 2-oxoglutarate-dependent" /protein_id="AAC73471.1" /db_xref="GI:1786565" /db_xref="ASAP:ABE-0001263" /db_xref="UniProtKB/Swiss-Prot:P37610" /db_xref="EcoGene:EG12423" /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES EALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGD KPFYRAG" gene complement(273479..274453) /gene="hemB" /locus_tag="b0369" /gene_synonym="ECK0366" /gene_synonym="JW0361" /gene_synonym="ncf" /db_xref="EcoGene:EG10428" CDS complement(273479..274453) /gene="hemB" /locus_tag="b0369" /gene_synonym="ECK0366" /gene_synonym="JW0361" /gene_synonym="ncf" /EC_number="4.2.1.24" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="5-aminolevulinate dehydratase = porphobilinogen synthase" /codon_start=1 /transl_table=11 /product="5-aminolevulinate dehydratase (porphobilinogen synthase)" /protein_id="AAC73472.2" /db_xref="GI:87081728" /db_xref="ASAP:ABE-0001266" /db_xref="UniProtKB/Swiss-Prot:P0ACB2" /db_xref="EcoGene:EG10428" /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR" gene join(274977..276434,277696..279144) /gene="yaiT" /locus_tag="b4580" /gene_synonym="ECK0368" /gene_synonym="JW0362" /gene_synonym="yaiU" /pseudo /db_xref="EcoGene:EG13605" CDS join(274977..276434,277696..279144) /gene="yaiT" /locus_tag="b4580" /gene_synonym="ECK0368" /gene_synonym="JW0362" /gene_synonym="yaiU" /note="pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001274" /db_xref="ASAP:ABE-0001288" /db_xref="ASAP:ABE-0285112" /db_xref="UniProtKB/Swiss-Prot:P77199" /db_xref="EcoGene:EG13605" mobile_element complement(276435..277692) /mobile_element_type="insertion sequence:IS3B" gene complement(276465..277331) /gene="insF1" /locus_tag="b0372" /gene_synonym="ECK0299" /db_xref="EcoGene:EG40006" CDS complement(276465..277331) /gene="insF1" /locus_tag="b0372" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="AAC73475.1" /db_xref="GI:1786570" /db_xref="ASAP:ABE-0001277" /db_xref="UniProtKB/Swiss-Prot:P0CF80" /db_xref="EcoGene:EG40006" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(277328..277627) /gene="insE1" /locus_tag="b0373" /gene_synonym="ECK0298" /db_xref="EcoGene:EG40005" CDS complement(277328..277627) /gene="insE1" /locus_tag="b0373" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="AAC73476.2" /db_xref="GI:226510928" /db_xref="ASAP:ABE-0001279" /db_xref="UniProtKB/Swiss-Prot:P0CF67" /db_xref="EcoGene:EG40005" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 279232..279855 /gene="yaiV" /locus_tag="b0375" /gene_synonym="ECK0370" /gene_synonym="JW0366" /db_xref="EcoGene:EG13607" CDS 279232..279855 /gene="yaiV" /locus_tag="b0375" /gene_synonym="ECK0370" /gene_synonym="JW0366" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="AAC73478.2" /db_xref="GI:226510929" /db_xref="ASAP:ABE-0001290" /db_xref="UniProtKB/Swiss-Prot:P0AAP5" /db_xref="EcoGene:EG13607" /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDT FVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY" gene complement(279856..281013) /gene="ampH" /locus_tag="b0376" /gene_synonym="ECK0371" /gene_synonym="JW5052" /gene_synonym="yaiH" /db_xref="EcoGene:EG12867" CDS complement(279856..281013) /gene="ampH" /locus_tag="b0376" /gene_synonym="ECK0371" /gene_synonym="JW5052" /gene_synonym="yaiH" /EC_number="3.4.17.8" /EC_number="3.5.2.6" /function="enzyme; Murein recycling" /note="GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine- carboxypeptidase/endopeptidase; penicillin-binding protein; weak beta-lactamase" /protein_id="AAC73479.1" /db_xref="GI:1786574" /db_xref="ASAP:ABE-0001292" /db_xref="UniProtKB/Swiss-Prot:P0AD70" /db_xref="EcoGene:EG12867" /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS" gene 281365..282585 /gene="sbmA" /locus_tag="b0377" /gene_synonym="ECK0372" /gene_synonym="JW0368" /db_xref="EcoGene:EG10928" CDS 281365..282585 /gene="sbmA" /locus_tag="b0377" /gene_synonym="ECK0372" /gene_synonym="JW0368" /function="putative membrane; Drug/analog sensitivity" /note="sensitivity to microcin B17, possibly envelop protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="peptide antibiotic transporter" /protein_id="AAC73480.1" /db_xref="GI:1786575" /db_xref="ASAP:ABE-0001297" /db_xref="UniProtKB/Swiss-Prot:P0AFY6" /db_xref="EcoGene:EG10928" /translation="MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ IPISAARFWSLDFLIFYAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLV EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE LDGDKIQEVTHTLS" gene 282598..283692 /gene="yaiW" /locus_tag="b0378" /gene_synonym="ECK0373" /gene_synonym="JW0369" /db_xref="EcoGene:EG13608" CDS 282598..283692 /gene="yaiW" /locus_tag="b0378" /gene_synonym="ECK0373" /gene_synonym="JW0369" /codon_start=1 /transl_table=11 /product="microcin Bac7 uptake protein; outer membrane surface-exposed lipoprotein" /protein_id="AAC73481.1" /db_xref="GI:1786576" /db_xref="ASAP:ABE-0001299" /db_xref="UniProtKB/Swiss-Prot:P77562" /db_xref="EcoGene:EG13608" /translation="MSRVNPLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLINMVPM GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE LATRKLAAKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAETKTGKSLPREMLPGI QLESPKITRNLTTAWFAKRVDERRARCMKQ" repeat_region 283706..283740 /note="REP33 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(283751..284059) /gene="yaiY" /locus_tag="b0379" /gene_synonym="ECK0374" /gene_synonym="JW0370" /db_xref="EcoGene:EG14279" CDS complement(283751..284059) /gene="yaiY" /locus_tag="b0379" /gene_synonym="ECK0374" /gene_synonym="JW0370" /codon_start=1 /transl_table=11 /product="DUF2755 family inner membrane protein" /protein_id="AAC73482.1" /db_xref="GI:1786577" /db_xref="ASAP:ABE-0001302" /db_xref="UniProtKB/Swiss-Prot:P0AAP7" /db_xref="EcoGene:EG14279" /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ " gene 284319..284531 /gene="yaiZ" /locus_tag="b0380" /gene_synonym="ECK0375" /gene_synonym="JW5053" /db_xref="EcoGene:EG14280" CDS 284319..284531 /gene="yaiZ" /locus_tag="b0380" /gene_synonym="ECK0375" /gene_synonym="JW5053" /codon_start=1 /transl_table=11 /product="DUF2754 family putative inner membrane protein" /protein_id="AAC73483.2" /db_xref="GI:87081730" /db_xref="ASAP:ABE-0001307" /db_xref="UniProtKB/Swiss-Prot:P0AAQ0" /db_xref="EcoGene:EG14280" /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG LVTWVISFWLAGLIIRRRDEETENAQ" gene complement(284555..285649) /gene="ddlA" /locus_tag="b0381" /gene_synonym="ECK0376" /gene_synonym="JW0372" /db_xref="EcoGene:EG10213" CDS complement(284555..285649) /gene="ddlA" /locus_tag="b0381" /gene_synonym="ECK0376" /gene_synonym="JW0372" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 1993184" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase A" /protein_id="AAC73484.1" /db_xref="GI:1786579" /db_xref="ASAP:ABE-0001309" /db_xref="UniProtKB/Swiss-Prot:P0A6J8" /db_xref="EcoGene:EG10213" /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVI FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA SGLGYTDLITRLIELALERHAADNALKTTM" gene 286112..286372 /gene="iraP" /locus_tag="b0382" /gene_synonym="ECK0377" /gene_synonym="JW0373" /gene_synonym="yaiB" /db_xref="EcoGene:EG11256" CDS 286112..286372 /gene="iraP" /locus_tag="b0382" /gene_synonym="ECK0377" /gene_synonym="JW0373" /gene_synonym="yaiB" /codon_start=1 /transl_table=11 /product="anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein" /protein_id="AAC73485.1" /db_xref="GI:1786581" /db_xref="ASAP:ABE-0001313" /db_xref="UniProtKB/Swiss-Prot:P0AAN9" /db_xref="EcoGene:EG11256" /translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ" gene 286473..287888 /gene="phoA" /locus_tag="b0383" /gene_synonym="ECK0378" /gene_synonym="JW0374" /gene_synonym="psiA" /db_xref="EcoGene:EG10727" CDS 286473..287888 /gene="phoA" /locus_tag="b0383" /gene_synonym="ECK0378" /gene_synonym="JW0374" /gene_synonym="psiA" /EC_number="3.1.3.1" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /note="alkaline phosphatase; start codon corrected; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="bacterial alkaline phosphatase" /protein_id="AAC73486.2" /db_xref="GI:48994877" /db_xref="ASAP:ABE-0001328" /db_xref="UniProtKB/Swiss-Prot:P00634" /db_xref="EcoGene:EG10727" /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKP LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADH AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN VVGLTDQTDLFYTMKAALGLK" gene 288007..288327 /gene="psiF" /locus_tag="b0384" /gene_synonym="ECK0379" /gene_synonym="JW5054" /db_xref="EcoGene:EG11401" CDS 288007..288327 /gene="psiF" /locus_tag="b0384" /gene_synonym="ECK0379" /gene_synonym="JW5054" /function="phenotype; Central intermediary metabolism: Phosphorus compounds" /note="induced by phosphate starvation; GO_process: GO:0006793 - phosphorus metabolic process; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="PsiF family protein" /protein_id="AAC73487.2" /db_xref="GI:87081731" /db_xref="ASAP:ABE-0001330" /db_xref="UniProtKB/Swiss-Prot:P0AFM4" /db_xref="EcoGene:EG11401" /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL KKAA" gene 288429..289544 /gene="yaiC" /locus_tag="b0385" /gene_synonym="adrA" /gene_synonym="ECK0380" /gene_synonym="JW0376" /db_xref="EcoGene:EG11257" CDS 288429..289544 /gene="yaiC" /locus_tag="b0385" /gene_synonym="adrA" /gene_synonym="ECK0380" /gene_synonym="JW0376" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, cellulose regualtor" /protein_id="AAC73488.1" /db_xref="GI:1786584" /db_xref="ASAP:ABE-0001336" /db_xref="UniProtKB/Swiss-Prot:P0AAP1" /db_xref="EcoGene:EG11257" /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA" gene complement(289561..290370) /gene="proC" /locus_tag="b0386" /gene_synonym="ECK0381" /gene_synonym="JW0377" /gene_synonym="pro" /gene_synonym="Pro2" /db_xref="EcoGene:EG10769" CDS complement(289561..290370) /gene="proC" /locus_tag="b0386" /gene_synonym="ECK0381" /gene_synonym="JW0377" /gene_synonym="pro" /gene_synonym="Pro2" /EC_number="1.5.1.2" /function="enzyme; Amino acid biosynthesis: Proline" /experiment="N-terminus verified by Edman degradation: PMID 6089111" /note="pyrroline-5-carboxylate reductase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase, NAD(P)-binding" /protein_id="AAC73489.1" /db_xref="GI:1786585" /db_xref="ASAP:ABE-0001338" /db_xref="UniProtKB/Swiss-Prot:P0A9L8" /db_xref="EcoGene:EG10769" /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS" gene 290490..290948 /gene="yaiI" /locus_tag="b0387" /gene_synonym="ECK0382" /gene_synonym="JW0378" /db_xref="EcoGene:EG13176" CDS 290490..290948 /gene="yaiI" /locus_tag="b0387" /gene_synonym="ECK0382" /gene_synonym="JW0378" /codon_start=1 /transl_table=11 /product="UPF0178 family protein" /protein_id="AAC73490.2" /db_xref="GI:87081732" /db_xref="ASAP:ABE-0001344" /db_xref="UniProtKB/Swiss-Prot:P0A8D3" /db_xref="EcoGene:EG13176" /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG" gene 291131..291655 /gene="aroL" /locus_tag="b0388" /gene_synonym="ECK0383" /gene_synonym="JW0379" /db_xref="EcoGene:EG10082" CDS 291131..291655 /gene="aroL" /locus_tag="b0388" /gene_synonym="ECK0383" /gene_synonym="JW0379" /EC_number="2.7.1.71" /function="enzyme; Amino acid biosynthesis: Chorismate" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="shikimate kinase II" /protein_id="AAC73491.1" /db_xref="GI:1786587" /db_xref="ASAP:ABE-0001353" /db_xref="UniProtKB/Swiss-Prot:P0A6E1" /db_xref="EcoGene:EG10082" /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV ISEIRSALAQTINC" gene 291705..291896 /gene="yaiA" /locus_tag="b0389" /gene_synonym="ECK0384" /gene_synonym="JW0380" /db_xref="EcoGene:EG11093" CDS 291705..291896 /gene="yaiA" /locus_tag="b0389" /gene_synonym="ECK0384" /gene_synonym="JW0380" /codon_start=1 /transl_table=11 /product="OxyR-regulated conserved protein" /protein_id="AAC73492.1" /db_xref="GI:1786588" /db_xref="ASAP:ABE-0001355" /db_xref="UniProtKB/Swiss-Prot:P0AAN5" /db_xref="EcoGene:EG11093" /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH PTAQEAMDAKKRYEDPDKE" gene 292154..292831 /gene="aroM" /locus_tag="b0390" /gene_synonym="ECK0385" /gene_synonym="JW0381" /db_xref="EcoGene:EG10083" CDS 292154..292831 /gene="aroM" /locus_tag="b0390" /gene_synonym="ECK0385" /gene_synonym="JW0381" /note="protein of aro operon, regulated by aroR" /codon_start=1 /transl_table=11 /product="AroM family protein" /protein_id="AAC73493.1" /db_xref="GI:1786589" /db_xref="ASAP:ABE-0001357" /db_xref="UniProtKB/Swiss-Prot:P0AE28" /db_xref="EcoGene:EG10083" /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR LAAELLV" gene 292903..293187 /gene="yaiE" /locus_tag="b0391" /gene_synonym="ECK0386" /gene_synonym="JW0382" /db_xref="EcoGene:EG12159" CDS 292903..293187 /gene="yaiE" /locus_tag="b0391" /gene_synonym="ECK0386" /gene_synonym="JW0382" /codon_start=1 /transl_table=11 /product="UPF0345 family protein" /protein_id="AAC73494.1" /db_xref="GI:1786590" /db_xref="ASAP:ABE-0001360" /db_xref="UniProtKB/Swiss-Prot:P0C037" /db_xref="EcoGene:EG12159" /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL" gene 293335..293676 /gene="ykiA" /locus_tag="b0392" /gene_synonym="ECK0387" /gene_synonym="JW0383" /pseudo /db_xref="EcoGene:EG14282" CDS 293335..293676 /gene="ykiA" /locus_tag="b0392" /gene_synonym="ECK0387" /gene_synonym="JW0383" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001363" /db_xref="UniProtKB/Swiss-Prot:P75704" /db_xref="EcoGene:EG14282" repeat_region 293778..293814 /note="REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(293834..294745) /gene="rdgC" /locus_tag="b0393" /gene_synonym="ECK0388" /gene_synonym="JW0384" /gene_synonym="yaiD" /db_xref="EcoGene:EG12158" CDS complement(293834..294745) /gene="rdgC" /locus_tag="b0393" /gene_synonym="ECK0388" /gene_synonym="JW0384" /gene_synonym="yaiD" /experiment="N-terminus verified by Edman degradation: PMID 10368163" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function" /protein_id="AAC73496.1" /db_xref="GI:1786592" /db_xref="ASAP:ABE-0001366" /db_xref="UniProtKB/Swiss-Prot:P36767" /db_xref="EcoGene:EG12158" /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD ADFILMTGELAALIQNLIEGLGGEAQR" gene 294870..295778 /gene="mak" /locus_tag="b0394" /gene_synonym="ECK0389" /gene_synonym="JW0385" /gene_synonym="yajF" /db_xref="EcoGene:EG11288" CDS 294870..295778 /gene="mak" /locus_tag="b0394" /gene_synonym="ECK0389" /gene_synonym="JW0385" /gene_synonym="yajF" /EC_number="2.7.1.4" /function="putative regulator; Not classified" /note="possible NAGC-like transcriptional regulator; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="manno(fructo)kinase" /protein_id="AAC73497.2" /db_xref="GI:87081733" /db_xref="ASAP:ABE-0001372" /db_xref="UniProtKB/Swiss-Prot:P23917" /db_xref="EcoGene:EG11288" /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPL PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGE CETPVRKAKHGDSSGVRGAAWLWPQE" repeat_region 295804..295994 /note="REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(296023..297207) /gene="araJ" /locus_tag="b0396" /gene_synonym="ECK0390" /gene_synonym="JW0386" /db_xref="EcoGene:EG10060" CDS complement(296023..297207) /gene="araJ" /locus_tag="b0396" /gene_synonym="ECK0390" /gene_synonym="JW0386" /function="transport; Degradation of small molecules: Carbon compounds" /note="involved in either transport or processing of arabinose polymers; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose-inducible putative transporter, MFS family" /protein_id="AAC73499.1" /db_xref="GI:1786595" /db_xref="ASAP:ABE-0001378" /db_xref="UniProtKB/Swiss-Prot:P23910" /db_xref="EcoGene:EG10060" /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF LLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAW FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP LG" gene complement(297333..300479) /gene="sbcC" /locus_tag="b0397" /gene_synonym="ECK0391" /gene_synonym="JW0387" /gene_synonym="rmuA" /db_xref="EcoGene:EG10927" CDS complement(297333..300479) /gene="sbcC" /locus_tag="b0397" /gene_synonym="ECK0391" /gene_synonym="JW0387" /gene_synonym="rmuA" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 9242643" /note="ATP-dependent dsDNA exonuclease; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="exonuclease, dsDNA, ATP-dependent" /protein_id="AAC73500.1" /db_xref="GI:1786597" /db_xref="ASAP:ABE-0001381" /db_xref="UniProtKB/Swiss-Prot:P13458" /db_xref="EcoGene:EG10927" /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV KKINGLGYSKLESTFAVK" gene complement(300476..301678) /gene="sbcD" /locus_tag="b0398" /gene_synonym="ECK0392" /gene_synonym="JW0388" /gene_synonym="yajA" /db_xref="EcoGene:EG11094" CDS complement(300476..301678) /gene="sbcD" /locus_tag="b0398" /gene_synonym="ECK0392" /gene_synonym="JW0388" /gene_synonym="yajA" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 9242643" /note="ATP-dependent dsDNA exonuclease; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="exonuclease, dsDNA, ATP-dependent" /protein_id="AAC73501.1" /db_xref="GI:1786598" /db_xref="ASAP:ABE-0001383" /db_xref="UniProtKB/Swiss-Prot:P0AG76" /db_xref="EcoGene:EG11094" /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH TLAGEHEA" gene 301868..302557 /gene="phoB" /locus_tag="b0399" /gene_synonym="ECK0393" /gene_synonym="JW0389" /gene_synonym="phoRc" /db_xref="EcoGene:EG10728" CDS 301868..302557 /gene="phoB" /locus_tag="b0399" /gene_synonym="ECK0393" /gene_synonym="JW0389" /gene_synonym="phoRc" /function="regulator; Global regulatory functions" /note="positive response regulator for pho regulon, sensor is PhoR (or CreC); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006793 - phosphorus metabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with PhoR" /protein_id="AAC73502.1" /db_xref="GI:1786599" /db_xref="ASAP:ABE-0001389" /db_xref="UniProtKB/Swiss-Prot:P0AFJ5" /db_xref="EcoGene:EG10728" /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV RGTGYRFSTRF" gene 302615..303910 /gene="phoR" /locus_tag="b0400" /gene_synonym="ECK0394" /gene_synonym="JW0390" /gene_synonym="nmpB" /gene_synonym="phoR1" /gene_synonym="R1pho" /db_xref="EcoGene:EG10733" CDS 302615..303910 /gene="phoR" /locus_tag="b0400" /gene_synonym="ECK0394" /gene_synonym="JW0390" /gene_synonym="nmpB" /gene_synonym="phoR1" /gene_synonym="R1pho" /EC_number="2.7.3.-" /function="enzyme; Global regulatory functions" /note="positive and negative sensor protein for pho regulon; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006793 - phosphorus metabolic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with PhoB" /protein_id="AAC73503.1" /db_xref="GI:1786600" /db_xref="ASAP:ABE-0001391" /db_xref="UniProtKB/Swiss-Prot:P08400" /db_xref="EcoGene:EG10733" /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP LTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD" gene 304317..305636 /gene="brnQ" /locus_tag="b0401" /gene_synonym="ECK0395" /gene_synonym="hrbA" /gene_synonym="JW0391" /db_xref="EcoGene:EG12168" CDS 304317..305636 /gene="brnQ" /locus_tag="b0401" /gene_synonym="ECK0395" /gene_synonym="hrbA" /gene_synonym="JW0391" /function="transport; Transport of small molecules: Amino acids, amines" /note="branched chain amino acid transport system II carrier protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009098 - leucine biosynthetic process; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val" /protein_id="AAC73504.1" /db_xref="GI:1786601" /db_xref="ASAP:ABE-0001394" /db_xref="UniProtKB/Swiss-Prot:P0AD99" /db_xref="EcoGene:EG12168" /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH" gene 305712..307085 /gene="proY" /locus_tag="b0402" /gene_synonym="ECK0396" /gene_synonym="hisY" /gene_synonym="JW5055" /gene_synonym="yajM" /db_xref="EcoGene:EG13609" CDS 305712..307085 /gene="proY" /locus_tag="b0402" /gene_synonym="ECK0396" /gene_synonym="hisY" /gene_synonym="JW5055" /gene_synonym="yajM" /function="transport; Transport of small molecules: Amino acids, amines" /note="proline permease transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="proline-specific permease" /protein_id="AAC73505.1" /db_xref="GI:1786602" /db_xref="ASAP:ABE-0001398" /db_xref="UniProtKB/Swiss-Prot:P0AAE2" /db_xref="EcoGene:EG13609" /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD RQLAENQ" repeat_region 307098..307130 /note="REP36 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 307244..309058 /gene="malZ" /locus_tag="b0403" /gene_synonym="ECK0397" /gene_synonym="JW0393" /db_xref="EcoGene:EG10565" CDS 307244..309058 /gene="malZ" /locus_tag="b0403" /gene_synonym="ECK0397" /gene_synonym="JW0393" /EC_number="3.2.1.20" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0000272 - polysaccharide catabolic process" /codon_start=1 /transl_table=11 /product="maltodextrin glucosidase" /protein_id="AAC73506.2" /db_xref="GI:345297171" /db_xref="ASAP:ABE-0001402" /db_xref="UniProtKB/Swiss-Prot:P21517" /db_xref="EcoGene:EG10565" /translation="MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNE EMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPP ARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRD WDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRH VDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESP WRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWR LDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMN YRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTA RFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDT ALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVV LPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN" gene complement(309063..309644) /gene="acpH" /locus_tag="b0404" /gene_synonym="acpD" /gene_synonym="ECK0398" /gene_synonym="JW0394" /gene_synonym="yajB" /db_xref="EcoGene:EG11095" CDS complement(309063..309644) /gene="acpH" /locus_tag="b0404" /gene_synonym="acpD" /gene_synonym="ECK0398" /gene_synonym="JW0394" /gene_synonym="yajB" /function="enzyme; Not classified" /note="putative glycoprotein" /codon_start=1 /transl_table=11 /product="acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase" /protein_id="AAC73507.1" /db_xref="GI:1786605" /db_xref="ASAP:ABE-0001404" /db_xref="UniProtKB/Swiss-Prot:P21515" /db_xref="EcoGene:EG11095" /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM HRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFV CYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR DSWYDLDAHYDALETRFWQFYPRMMAQASRKAL" gene 309737..310807 /gene="queA" /locus_tag="b0405" /gene_synonym="ECK0399" /gene_synonym="JW0395" /db_xref="EcoGene:EG10812" CDS 309737..310807 /gene="queA" /locus_tag="b0405" /gene_synonym="ECK0399" /gene_synonym="JW0395" /EC_number="5.-.-.-" /function="enzyme; Queuosine biosynthesis" /note="synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /protein_id="AAC73508.1" /db_xref="GI:1786606" /db_xref="ASAP:ABE-0001411" /db_xref="UniProtKB/Swiss-Prot:P0A7F9" /db_xref="EcoGene:EG10812" /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK PGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF FSYGDAMFITYNPQAINERVGE" gene 310863..311990 /gene="tgt" /locus_tag="b0406" /gene_synonym="ECK0400" /gene_synonym="JW0396" /gene_synonym="vacC" /db_xref="EcoGene:EG10996" CDS 310863..311990 /gene="tgt" /locus_tag="b0406" /gene_synonym="ECK0400" /gene_synonym="JW0396" /gene_synonym="vacC" /EC_number="2.4.2.29" /function="enzyme; tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 8323579" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA-guanine transglycosylase" /protein_id="AAC73509.1" /db_xref="GI:1786607" /db_xref="ASAP:ABE-0001413" /db_xref="UniProtKB/Swiss-Prot:P0A847" /db_xref="EcoGene:EG10996" /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD" gene 312013..312345 /gene="yajC" /locus_tag="b0407" /gene_synonym="ECK0401" /gene_synonym="JW0397" /db_xref="EcoGene:EG11096" CDS 312013..312345 /gene="yajC" /locus_tag="b0407" /gene_synonym="ECK0401" /gene_synonym="JW0397" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="AAC73510.1" /db_xref="GI:1786608" /db_xref="ASAP:ABE-0001415" /db_xref="UniProtKB/Swiss-Prot:P0ADZ7" /db_xref="EcoGene:EG11096" /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL PKGTMKAL" gene 312373..314220 /gene="secD" /locus_tag="b0408" /gene_synonym="ECK0402" /gene_synonym="JW0398" /db_xref="EcoGene:EG10938" CDS 312373..314220 /gene="secD" /locus_tag="b0408" /gene_synonym="ECK0402" /gene_synonym="JW0398" /function="transport; Protein, peptide secretion" /note="protein secretion; membrane protein, part of the channel; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="AAC73511.1" /db_xref="GI:1786609" /db_xref="ASAP:ABE-0001417" /db_xref="UniProtKB/Swiss-Prot:P0AG90" /db_xref="EcoGene:EG10938" /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI" gene 314231..315202 /gene="secF" /locus_tag="b0409" /gene_synonym="ECK0403" /gene_synonym="JW0399" /db_xref="EcoGene:EG10940" CDS 314231..315202 /gene="secF" /locus_tag="b0409" /gene_synonym="ECK0403" /gene_synonym="JW0399" /function="transport; Protein, peptide secretion" /note="protein secretion, membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="SecYEG protein translocase auxillary subunit" /protein_id="AAC73512.1" /db_xref="GI:1786610" /db_xref="ASAP:ABE-0001419" /db_xref="UniProtKB/Swiss-Prot:P0AG93" /db_xref="EcoGene:EG10940" /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP" gene 315331..315678 /gene="yajD" /locus_tag="b0410" /gene_synonym="ECK0404" /gene_synonym="JW0400" /db_xref="EcoGene:EG11097" CDS 315331..315678 /gene="yajD" /locus_tag="b0410" /gene_synonym="ECK0404" /gene_synonym="JW0400" /codon_start=1 /transl_table=11 /product="HNH nuclease family protein" /protein_id="AAC73513.1" /db_xref="GI:1786611" /db_xref="ASAP:ABE-0001422" /db_xref="UniProtKB/Swiss-Prot:P0AAQ2" /db_xref="EcoGene:EG11097" /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN PFADLKAMMNKKK" repeat_region 315694..315791 /note="REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(315855..316739) /gene="tsx" /locus_tag="b0411" /gene_synonym="ECK0405" /gene_synonym="JW0401" /gene_synonym="nupA" /gene_synonym="T6rec" /db_xref="EcoGene:EG11035" CDS complement(315855..316739) /gene="tsx" /locus_tag="b0411" /gene_synonym="ECK0405" /gene_synonym="JW0401" /gene_synonym="nupA" /gene_synonym="T6rec" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="nucleoside channel; receptor of phage T6 and colicin K; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="nucleoside channel, receptor of phage T6 and colicin K" /protein_id="AAC73514.1" /db_xref="GI:1786612" /db_xref="ASAP:ABE-0001425" /db_xref="UniProtKB/Swiss-Prot:P0A927" /db_xref="EcoGene:EG11035" /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN FNVRSTGWGGYLVVGYNF" gene complement(317038..317577) /gene="yajI" /locus_tag="b0412" /gene_synonym="ECK0406" /gene_synonym="JW5056" /db_xref="EcoGene:EG12874" CDS complement(317038..317577) /gene="yajI" /locus_tag="b0412" /gene_synonym="ECK0406" /gene_synonym="JW5056" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="AAC73515.2" /db_xref="GI:87081734" /db_xref="ASAP:ABE-0001433" /db_xref="UniProtKB/Swiss-Prot:P46122" /db_xref="EcoGene:EG12874" /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN QETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLR IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG ISVDQLGFVRIHDIQPVMQ" gene 317728..318177 /gene="nrdR" /locus_tag="b0413" /gene_synonym="ECK0407" /gene_synonym="JW0403" /gene_synonym="ribX" /gene_synonym="ybaD" /db_xref="EcoGene:EG11320" CDS 317728..318177 /gene="nrdR" /locus_tag="b0413" /gene_synonym="ECK0407" /gene_synonym="JW0403" /gene_synonym="ribX" /gene_synonym="ybaD" /codon_start=1 /transl_table=11 /product="Nrd regulon repressor" /protein_id="AAC73516.1" /db_xref="GI:1786615" /db_xref="ASAP:ABE-0001437" /db_xref="UniProtKB/Swiss-Prot:P0A8D0" /db_xref="EcoGene:EG11320" /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED" gene 318181..319284 /gene="ribD" /locus_tag="b0414" /gene_synonym="ECK0408" /gene_synonym="JW0404" /gene_synonym="ribG" /gene_synonym="ybaE" /db_xref="EcoGene:EG11321" CDS 318181..319284 /gene="ribD" /locus_tag="b0414" /gene_synonym="ECK0408" /gene_synonym="JW0404" /gene_synonym="ribG" /gene_synonym="ybaE" /EC_number="1.1.1.193" /EC_number="3.5.4.26" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /codon_start=1 /transl_table=11 /product="fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase" /protein_id="AAC73517.1" /db_xref="GI:1786616" /db_xref="ASAP:ABE-0001441" /db_xref="UniProtKB/Swiss-Prot:P25539" /db_xref="EcoGene:EG11321" /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR TAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL YPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHK GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA" gene 319373..319843 /gene="ribE" /locus_tag="b0415" /gene_synonym="ECK0409" /gene_synonym="JW0405" /gene_synonym="ribH" /gene_synonym="ybaF" /db_xref="EcoGene:EG11322" CDS 319373..319843 /gene="ribE" /locus_tag="b0415" /gene_synonym="ECK0409" /gene_synonym="JW0405" /gene_synonym="ribH" /gene_synonym="ybaF" /EC_number="2.5.1.9" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /note="riboflavin synthase, beta chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase beta chain" /protein_id="AAC73518.1" /db_xref="GI:1786617" /db_xref="ASAP:ABE-0001444" /db_xref="UniProtKB/Swiss-Prot:P61714" /db_xref="EcoGene:EG11322" /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA" gene 319863..320282 /gene="nusB" /locus_tag="b0416" /gene_synonym="ECK0410" /gene_synonym="groNB" /gene_synonym="JW0406" /gene_synonym="ssaD" /gene_synonym="ssyB" /db_xref="EcoGene:EG10666" CDS 319863..320282 /gene="nusB" /locus_tag="b0416" /gene_synonym="ECK0410" /gene_synonym="groNB" /gene_synonym="JW0406" /gene_synonym="ssaD" /gene_synonym="ssyB" /function="factor; RNA synthesis, modification, DNA transcription" /note="transcription termination; L factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcription antitermination protein" /protein_id="AAC73519.1" /db_xref="GI:1786618" /db_xref="ASAP:ABE-0001447" /db_xref="UniProtKB/Swiss-Prot:P0A780" /db_xref="EcoGene:EG10666" /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK" gene 320360..321337 /gene="thiL" /locus_tag="b0417" /gene_synonym="ECK0411" /gene_synonym="JW0407" /db_xref="EcoGene:EG20227" CDS 320360..321337 /gene="thiL" /locus_tag="b0417" /gene_synonym="ECK0411" /gene_synonym="JW0407" /EC_number="2.7.4.16" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamine" /note="GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="thiamine monophosphate kinase" /protein_id="AAC73520.1" /db_xref="GI:1786619" /db_xref="ASAP:ABE-0001452" /db_xref="UniProtKB/Swiss-Prot:P0AGG0" /db_xref="EcoGene:EG20227" /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI SDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP" gene 321315..321833 /gene="pgpA" /locus_tag="b0418" /gene_synonym="ECK0412" /gene_synonym="JW0408" /gene_synonym="yajN" /db_xref="EcoGene:EG10704" CDS 321315..321833 /gene="pgpA" /locus_tag="b0418" /gene_synonym="ECK0412" /gene_synonym="JW0408" /gene_synonym="yajN" /EC_number="3.1.3.27" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /note="phosphatidylglycerophosphatase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="AAC73521.1" /db_xref="GI:1786620" /db_xref="ASAP:ABE-0001454" /db_xref="UniProtKB/Swiss-Prot:P18200" /db_xref="EcoGene:EG10704" /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY FIGHHWPLGILS" repeat_region 321846..321882 /note="REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(321887..322861) /gene="yajO" /locus_tag="b0419" /gene_synonym="ECK0413" /gene_synonym="JW0409" /db_xref="EcoGene:EG13611" CDS complement(321887..322861) /gene="yajO" /locus_tag="b0419" /gene_synonym="ECK0413" /gene_synonym="JW0409" /note="putative NAD(P)H-dependent xylose reductase" /codon_start=1 /transl_table=11 /product="2-carboxybenzaldehyde reductase" /protein_id="AAC73522.2" /db_xref="GI:87081735" /db_xref="ASAP:ABE-0001457" /db_xref="UniProtKB/Swiss-Prot:P77735" /db_xref="EcoGene:EG13611" /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK" gene complement(323041..324903) /gene="dxs" /locus_tag="b0420" /gene_synonym="ECK0414" /gene_synonym="JW0410" /gene_synonym="yajP" /db_xref="EcoGene:EG13612" CDS complement(323041..324903) /gene="dxs" /locus_tag="b0420" /gene_synonym="ECK0414" /gene_synonym="JW0410" /gene_synonym="yajP" /EC_number="2.2.1.7" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="1-deoxyxylulose-5-phosphate synthase; flavoprotein; GO_process: GO:0008615 - pyridoxine biosynthetic process; GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring" /protein_id="AAC73523.1" /db_xref="GI:1786622" /db_xref="ASAP:ABE-0001461" /db_xref="UniProtKB/Swiss-Prot:P77488" /db_xref="EcoGene:EG13612" /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA FEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA" gene complement(324928..325827) /gene="ispA" /locus_tag="b0421" /gene_synonym="ECK0415" /gene_synonym="JW0411" /db_xref="EcoGene:EG10508" CDS complement(324928..325827) /gene="ispA" /locus_tag="b0421" /gene_synonym="ECK0415" /gene_synonym="JW0411" /EC_number="2.5.1.1" /EC_number="2.5.1.10" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /experiment="N-terminus verified by Edman degradation: PMID 9740056" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="geranyltranstransferase" /protein_id="AAC73524.1" /db_xref="GI:1786623" /db_xref="ASAP:ABE-0001463" /db_xref="UniProtKB/Swiss-Prot:P22939" /db_xref="EcoGene:EG10508" /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ LAEQSLDTSALEALADYIIQRNK" gene complement(325827..326069) /gene="xseB" /locus_tag="b0422" /gene_synonym="ECK0416" /gene_synonym="JW0412" /gene_synonym="yajE" /db_xref="EcoGene:EG11098" CDS complement(325827..326069) /gene="xseB" /locus_tag="b0422" /gene_synonym="ECK0416" /gene_synonym="JW0412" /gene_synonym="yajE" /EC_number="3.1.11.6" /function="enzyme; Degradation of DNA" /note="exonuclease VII, small subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="exonuclease VII small subunit" /protein_id="AAC73525.1" /db_xref="GI:1786624" /db_xref="ASAP:ABE-0001466" /db_xref="UniProtKB/Swiss-Prot:P0A8G9" /db_xref="EcoGene:EG11098" /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE" gene 326275..327723 /gene="thiI" /locus_tag="b0423" /gene_synonym="ECK0417" /gene_synonym="JW0413" /gene_synonym="nuvA" /gene_synonym="yajJ" /gene_synonym="yajK" /db_xref="EcoGene:EG13273" CDS 326275..327723 /gene="thiI" /locus_tag="b0423" /gene_synonym="ECK0417" /gene_synonym="JW0413" /gene_synonym="nuvA" /gene_synonym="yajJ" /gene_synonym="yajK" /function="enzyme; tRNA modification" /note="GO_process: GO:0009228 - thiamin biosynthetic process; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA s(4)U8 sulfurtransferase" /protein_id="AAC73526.1" /db_xref="GI:1786625" /db_xref="ASAP:ABE-0001470" /db_xref="UniProtKB/Swiss-Prot:P77718" /db_xref="EcoGene:EG13273" /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLL LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTE QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNK TWLLWCERGVMSRLQALYLREQGFNNVKVYRP" repeat_region 327744..327775 /note="REP39 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(327777..328367) /gene="yajL" /locus_tag="b0424" /gene_synonym="ECK0418" /gene_synonym="JW5057" /gene_synonym="thiJ" /db_xref="EcoGene:EG13272" CDS complement(327777..328367) /gene="yajL" /locus_tag="b0424" /gene_synonym="ECK0418" /gene_synonym="JW5057" /gene_synonym="thiJ" /note="GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="oxidative-stress-resistance chaperone" /protein_id="AAC73527.2" /db_xref="GI:87081736" /db_xref="ASAP:ABE-0001472" /db_xref="UniProtKB/Swiss-Prot:Q46948" /db_xref="EcoGene:EG13272" /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGT AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE" gene complement(328330..329241) /gene="panE" /locus_tag="b0425" /gene_synonym="apbA" /gene_synonym="ECK0419" /gene_synonym="JW0415" /db_xref="EcoGene:EG13271" CDS complement(328330..329241) /gene="panE" /locus_tag="b0425" /gene_synonym="apbA" /gene_synonym="ECK0419" /gene_synonym="JW0415" /EC_number="1.1.1.169" /function="phenotype; Not classified" /note="2-dehydropantoate 2-reductase; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="2-dehydropantoate reductase, NADPH-specific" /protein_id="AAC73528.1" /db_xref="GI:1786627" /db_xref="ASAP:ABE-0001474" /db_xref="UniProtKB/Swiss-Prot:P0A9J4" /db_xref="EcoGene:EG13271" /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP ENTRLFEMVKRKESEYERIGTGLPRPW" gene 329409..329900 /gene="yajQ" /locus_tag="b0426" /gene_synonym="ECK0420" /gene_synonym="JW5058" /db_xref="EcoGene:EG13613" CDS 329409..329900 /gene="yajQ" /locus_tag="b0426" /gene_synonym="ECK0420" /gene_synonym="JW5058" /codon_start=1 /transl_table=11 /product="phage Phi6 host factor, ATP/GTP binding protein" /protein_id="AAC73529.2" /db_xref="GI:87081737" /db_xref="ASAP:ABE-0001478" /db_xref="UniProtKB/Swiss-Prot:P0A8E7" /db_xref="EcoGene:EG13613" /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN FRD" repeat_region 329926..330012 /note="REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(330028..331392) /gene="yajR" /locus_tag="b0427" /gene_synonym="ECK0421" /gene_synonym="JW5059" /db_xref="EcoGene:EG13614" CDS complement(330028..331392) /gene="yajR" /locus_tag="b0427" /gene_synonym="ECK0421" /gene_synonym="JW5059" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73530.2" /db_xref="GI:87081738" /db_xref="ASAP:ABE-0001481" /db_xref="UniProtKB/Swiss-Prot:P77726" /db_xref="EcoGene:EG13614" /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG YKGTAMGVYSTSQFLGVAIGGSLGGWINGMFDGQGVFLAGAMLAAVWLTVASTMKEPP YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFEIEQA IRQA" gene complement(331541..332431) /gene="cyoE" /locus_tag="b0428" /gene_synonym="ECK0422" /gene_synonym="JW0418" /db_xref="EcoGene:EG10182" CDS complement(331541..332431) /gene="cyoE" /locus_tag="b0428" /gene_synonym="ECK0422" /gene_synonym="JW0418" /EC_number="2.5.1.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="protoheme IX farnesyltransferase (haeme O biosynthesis); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /protein_id="AAC73531.1" /db_xref="GI:1786631" /db_xref="ASAP:ABE-0001484" /db_xref="UniProtKB/Swiss-Prot:P0AEA5" /db_xref="EcoGene:EG10182" /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS VMMSVDFMVPDSHTLLAAVW" gene complement(332443..332772) /gene="cyoD" /locus_tag="b0429" /gene_synonym="ECK0423" /gene_synonym="JW0419" /db_xref="EcoGene:EG10181" CDS complement(332443..332772) /gene="cyoD" /locus_tag="b0429" /gene_synonym="ECK0423" /gene_synonym="JW0419" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit IV" /protein_id="AAC73532.1" /db_xref="GI:1786632" /db_xref="ASAP:ABE-0001487" /db_xref="UniProtKB/Swiss-Prot:P0ABJ6" /db_xref="EcoGene:EG10181" /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL NYNMMMH" gene complement(332772..333386) /gene="cyoC" /locus_tag="b0430" /gene_synonym="ECK0424" /gene_synonym="JW0420" /db_xref="EcoGene:EG10180" CDS complement(332772..333386) /gene="cyoC" /locus_tag="b0430" /gene_synonym="ECK0424" /gene_synonym="JW0420" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit III" /protein_id="AAC73533.1" /db_xref="GI:1786633" /db_xref="ASAP:ABE-0001491" /db_xref="UniProtKB/Swiss-Prot:P0ABJ3" /db_xref="EcoGene:EG10180" /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM" gene complement(333376..335367) /gene="cyoB" /locus_tag="b0431" /gene_synonym="ECK0425" /gene_synonym="JW0421" /db_xref="EcoGene:EG10179" CDS complement(333376..335367) /gene="cyoB" /locus_tag="b0431" /gene_synonym="ECK0425" /gene_synonym="JW0421" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit I" /protein_id="AAC73534.1" /db_xref="GI:1786634" /db_xref="ASAP:ABE-0001493" /db_xref="UniProtKB/Swiss-Prot:P0ABI8" /db_xref="EcoGene:EG10179" /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWE MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN" gene complement(335389..336336) /gene="cyoA" /locus_tag="b0432" /gene_synonym="ECK0426" /gene_synonym="JW0422" /db_xref="EcoGene:EG10178" CDS complement(335389..336336) /gene="cyoA" /locus_tag="b0432" /gene_synonym="ECK0426" /gene_synonym="JW0422" /EC_number="1.10.3.-" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="cytochrome o ubiquinol oxidase subunit II" /protein_id="AAC73535.1" /db_xref="GI:1786635" /db_xref="ASAP:ABE-0001495" /db_xref="UniProtKB/Swiss-Prot:P0ABJ1" /db_xref="EcoGene:EG10178" /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM KFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH" gene complement(336796..338271) /gene="ampG" /locus_tag="b0433" /gene_synonym="ECK0427" /gene_synonym="JW0423" /db_xref="EcoGene:EG12183" CDS complement(336796..338271) /gene="ampG" /locus_tag="b0433" /gene_synonym="ECK0427" /gene_synonym="JW0423" /function="regulator; Drug/analog sensitivity" /note="regulates beta-lactamase synthesis; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="muropeptide transporter" /protein_id="AAC73536.1" /db_xref="GI:1786636" /db_xref="ASAP:ABE-0001501" /db_xref="UniProtKB/Swiss-Prot:P0AE16" /db_xref="EcoGene:EG12183" /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA VPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT" gene complement(338315..338893) /gene="yajG" /locus_tag="b0434" /gene_synonym="ECK0428" /gene_synonym="JW0424" /db_xref="EcoGene:EG12182" CDS complement(338315..338893) /gene="yajG" /locus_tag="b0434" /gene_synonym="ECK0428" /gene_synonym="JW0424" /function="putative enzyme; Not classified" /note="putative polymerase/proteinase" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="AAC73537.2" /db_xref="GI:87081739" /db_xref="ASAP:ABE-0001504" /db_xref="UniProtKB/Swiss-Prot:P0ADA5" /db_xref="EcoGene:EG12182" /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT VSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVN LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNK NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR" gene 339198..339515 /gene="bolA" /locus_tag="b0435" /gene_synonym="ECK0429" /gene_synonym="JW5060" /db_xref="EcoGene:EG10125" CDS 339198..339515 /gene="bolA" /locus_tag="b0435" /gene_synonym="ECK0429" /gene_synonym="JW5060" /function="putative regulator; Murein sacculus, peptidoglycan" /note="possible regulator of murein genes; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC" /protein_id="AAC73538.2" /db_xref="GI:87081740" /db_xref="ASAP:ABE-0001508" /db_xref="UniProtKB/Swiss-Prot:P0ABE2" /db_xref="EcoGene:EG10125" /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG SIA" gene 339859..341157 /gene="tig" /locus_tag="b0436" /gene_synonym="ECK0430" /gene_synonym="JW0426" /db_xref="EcoGene:EG11003" CDS 339859..341157 /gene="tig" /locus_tag="b0436" /gene_synonym="ECK0430" /gene_synonym="JW0426" /function="factor; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 2211496,2843289,9298646,9600841,9868784" /note="trigger factor; a molecular chaperone involved in cell division; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis/trans isomerase (trigger factor)" /protein_id="AAC73539.1" /db_xref="GI:1786640" /db_xref="ASAP:ABE-0001511" /db_xref="UniProtKB/Swiss-Prot:P0A850" /db_xref="EcoGene:EG11003" /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA" gene 341403..342026 /gene="clpP" /locus_tag="b0437" /gene_synonym="ECK0431" /gene_synonym="JW0427" /gene_synonym="lopP" /gene_synonym="wseA" /db_xref="EcoGene:EG10158" CDS 341403..342026 /gene="clpP" /locus_tag="b0437" /gene_synonym="ECK0431" /gene_synonym="JW0427" /gene_synonym="lopP" /gene_synonym="wseA" /EC_number="3.4.21.92" /function="enzyme; Degradation of proteins, peptides, glyco" /note="ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0008233 - peptidase activity; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases" /protein_id="AAC73540.1" /db_xref="GI:1786641" /db_xref="ASAP:ABE-0001515" /db_xref="UniProtKB/Swiss-Prot:P0A6G7" /db_xref="EcoGene:EG10158" /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN" gene 342152..343426 /gene="clpX" /locus_tag="b0438" /gene_synonym="ECK0432" /gene_synonym="JW0428" /gene_synonym="lopC" /db_xref="EcoGene:EG10159" CDS 342152..343426 /gene="clpX" /locus_tag="b0438" /gene_synonym="ECK0432" /gene_synonym="JW0428" /gene_synonym="lopC" /function="enzyme; Degradation of proteins, peptides, glyco" /note="ATP-dependent specificity component of clpP serine protease, chaperone; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease" /protein_id="AAC73541.1" /db_xref="GI:1786642" /db_xref="ASAP:ABE-0001517" /db_xref="UniProtKB/Swiss-Prot:P0A6H1" /db_xref="EcoGene:EG10159" /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE" gene 343614..345968 /gene="lon" /locus_tag="b0439" /gene_synonym="capR" /gene_synonym="deg" /gene_synonym="dir" /gene_synonym="ECK0433" /gene_synonym="JW0429" /gene_synonym="lonA" /gene_synonym="lopA" /gene_synonym="muc" /db_xref="EcoGene:EG10542" CDS 343614..345968 /gene="lon" /locus_tag="b0439" /gene_synonym="capR" /gene_synonym="deg" /gene_synonym="dir" /gene_synonym="ECK0433" /gene_synonym="JW0429" /gene_synonym="lonA" /gene_synonym="lopA" /gene_synonym="muc" /EC_number="3.4.21.53" /function="enzyme; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 2984174,8294008" /note="DNA-binding, ATP-dependent protease La; heat shock K-protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0008233 - peptidase activity" /codon_start=1 /transl_table=11 /product="DNA-binding ATP-dependent protease La" /protein_id="AAC73542.1" /db_xref="GI:1786643" /db_xref="ASAP:ABE-0001521" /db_xref="UniProtKB/Swiss-Prot:P0A9M0" /db_xref="EcoGene:EG10542" /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK HIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK" gene 346177..346449 /gene="hupB" /locus_tag="b0440" /gene_synonym="dpeA" /gene_synonym="ECK0434" /gene_synonym="hopD" /gene_synonym="JW0430" /db_xref="EcoGene:EG10467" CDS 346177..346449 /gene="hupB" /locus_tag="b0440" /gene_synonym="dpeA" /gene_synonym="ECK0434" /gene_synonym="hopD" /gene_synonym="JW0430" /function="factor; Basic proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 215461,350619,6987059,9298646" /note="DNA-binding protein HU-beta, NS1 (HU-1); GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="HU, DNA-binding transcriptional regulator, beta subunit" /protein_id="AAC73543.1" /db_xref="GI:1786644" /db_xref="ASAP:ABE-0001527" /db_xref="UniProtKB/Swiss-Prot:P0ACF4" /db_xref="EcoGene:EG10467" /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN" gene 346641..348512 /gene="ppiD" /locus_tag="b0441" /gene_synonym="ECK0435" /gene_synonym="JW0431" /gene_synonym="ybaU" /db_xref="EcoGene:EG13249" CDS 346641..348512 /gene="ppiD" /locus_tag="b0441" /gene_synonym="ECK0435" /gene_synonym="JW0431" /gene_synonym="ybaU" /EC_number="5.2.1.8" /function="putative factor; Not classified" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="periplasmic folding chaperone, has an inactive PPIase domain" /protein_id="AAC73544.1" /db_xref="GI:1786645" /db_xref="ASAP:ABE-0001531" /db_xref="UniProtKB/Swiss-Prot:P0ADY1" /db_xref="EcoGene:EG13249" /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ" gene 348663..349034 /gene="ybaV" /locus_tag="b0442" /gene_synonym="ECK0436" /gene_synonym="JW0432" /db_xref="EcoGene:EG13250" CDS 348663..349034 /gene="ybaV" /locus_tag="b0442" /gene_synonym="ECK0436" /gene_synonym="JW0432" /codon_start=1 /transl_table=11 /product="putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein" /protein_id="AAC73545.1" /db_xref="GI:1786646" /db_xref="ASAP:ABE-0001534" /db_xref="UniProtKB/Swiss-Prot:P0AAR8" /db_xref="EcoGene:EG13250" /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED LKQVPGMGNSLVERNLAVLTL" gene 349128..349526 /gene="fadM" /locus_tag="b0443" /gene_synonym="ECK0437" /gene_synonym="JW0433" /gene_synonym="tesC" /gene_synonym="ybaW" /db_xref="EcoGene:EG13251" CDS 349128..349526 /gene="fadM" /locus_tag="b0443" /gene_synonym="ECK0437" /gene_synonym="JW0433" /gene_synonym="tesC" /gene_synonym="ybaW" /function="enzyme; fatty acid degradation" /codon_start=1 /transl_table=11 /product="long-chain acyl-CoA thioesterase III" /protein_id="AAC73546.1" /db_xref="GI:1786647" /db_xref="ASAP:ABE-0001537" /db_xref="UniProtKB/Swiss-Prot:P77712" /db_xref="EcoGene:EG13251" /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA LITFVCIDLKTQKALALEGELREKLEQMVK" repeat_region 349539..349563 /note="REP41 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(349578..350273) /gene="queC" /locus_tag="b0444" /gene_synonym="ECK0438" /gene_synonym="JW0434" /gene_synonym="ybaX" /db_xref="EcoGene:EG13252" CDS complement(349578..350273) /gene="queC" /locus_tag="b0444" /gene_synonym="ECK0438" /gene_synonym="JW0434" /gene_synonym="ybaX" /function="enzyme; Queuosine biosynthesis" /note="GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis" /protein_id="AAC73547.1" /db_xref="GI:1786648" /db_xref="ASAP:ABE-0001539" /db_xref="UniProtKB/Swiss-Prot:P77756" /db_xref="EcoGene:EG13252" /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL MWIDKAETWALADYYGKLDLVRNETLTCYNGFKGDGCGHCAACNLRANGLNHYLADKP TVMAAMKQKTGLR" gene complement(350338..352038) /gene="ybaE" /locus_tag="b0445" /gene_synonym="ECK0439" /gene_synonym="JW0435" /db_xref="EcoGene:EG13217" CDS complement(350338..352038) /gene="ybaE" /locus_tag="b0445" /gene_synonym="ECK0439" /gene_synonym="JW0435" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative ABC transporter periplasmic binding protein" /protein_id="AAC73548.1" /db_xref="GI:1786650" /db_xref="ASAP:ABE-0001542" /db_xref="UniProtKB/Swiss-Prot:P46890" /db_xref="EcoGene:EG13217" /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT LQAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEE NRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ " gene 352138..352956 /gene="cof" /locus_tag="b0446" /gene_synonym="ECK0440" /gene_synonym="JW0436" /db_xref="EcoGene:EG13216" CDS 352138..352956 /gene="cof" /locus_tag="b0446" /gene_synonym="ECK0440" /gene_synonym="JW0436" /codon_start=1 /transl_table=11 /product="thiamine pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase" /protein_id="AAC73549.2" /db_xref="GI:87081741" /db_xref="ASAP:ABE-0001548" /db_xref="UniProtKB/Swiss-Prot:P46891" /db_xref="EcoGene:EG13216" /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE MLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE" gene 353109..353567 /gene="ybaO" /locus_tag="b0447" /gene_synonym="ECK0441" /gene_synonym="grp?" /gene_synonym="JW0437" /db_xref="EcoGene:EG13218" CDS 353109..353567 /gene="ybaO" /locus_tag="b0447" /gene_synonym="ECK0441" /gene_synonym="grp?" /gene_synonym="JW0437" /function="putative regulator; Not classified" /note="putative LRP-like transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC73550.2" /db_xref="GI:87081742" /db_xref="ASAP:ABE-0001553" /db_xref="UniProtKB/Swiss-Prot:P0ACJ5" /db_xref="EcoGene:EG13218" /translation="MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLED DGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGE YDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE" gene 353597..355369 /gene="mdlA" /locus_tag="b0448" /gene_synonym="ECK0442" /gene_synonym="JW0438" /gene_synonym="mdl" /db_xref="EcoGene:EG11622" CDS 353597..355369 /gene="mdlA" /locus_tag="b0448" /gene_synonym="ECK0442" /gene_synonym="JW0438" /gene_synonym="mdl" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="putative multidrug ABC transporter ATPase" /protein_id="AAC73551.1" /db_xref="GI:1786653" /db_xref="ASAP:ABE-0001555" /db_xref="UniProtKB/Swiss-Prot:P77265" /db_xref="EcoGene:EG11622" /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD GVTEQHFTTGQILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL TLFSLLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE HQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRD MYRYQQLEAALDDAPENREEAVDA" gene 355362..357143 /gene="mdlB" /locus_tag="b0449" /gene_synonym="ECK0443" /gene_synonym="JW5061" /gene_synonym="mdl" /db_xref="EcoGene:EG14374" CDS 355362..357143 /gene="mdlB" /locus_tag="b0449" /gene_synonym="ECK0443" /gene_synonym="JW5061" /gene_synonym="mdl" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative multidrug ABC transporter ATPase" /protein_id="AAC73552.1" /db_xref="GI:1786654" /db_xref="ASAP:ABE-0001557" /db_xref="UniProtKB/Swiss-Prot:P0AAG5" /db_xref="EcoGene:EG14374" /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL LISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG RYWQMYQLQLAGEELAASVREEESLSA" gene 357324..357662 /gene="glnK" /locus_tag="b0450" /gene_synonym="ECK0444" /gene_synonym="JW0440" /gene_synonym="ybaI" /db_xref="EcoGene:EG12191" CDS 357324..357662 /gene="glnK" /locus_tag="b0450" /gene_synonym="ECK0444" /gene_synonym="JW0440" /gene_synonym="ybaI" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="nitrogen regulatory protein P-II 2; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB" /protein_id="AAC73553.1" /db_xref="GI:1786655" /db_xref="ASAP:ABE-0001562" /db_xref="UniProtKB/Swiss-Prot:P0AC55" /db_xref="EcoGene:EG12191" /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI RTGEADEAAL" gene 357692..358978 /gene="amtB" /locus_tag="b0451" /gene_synonym="ECK0445" /gene_synonym="JW0441" /gene_synonym="ybaG" /db_xref="EcoGene:EG11821" CDS 357692..358978 /gene="amtB" /locus_tag="b0451" /gene_synonym="ECK0445" /gene_synonym="JW0441" /gene_synonym="ybaG" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /note="probable ammonium transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="AAC73554.1" /db_xref="GI:1786656" /db_xref="ASAP:ABE-0001564" /db_xref="UniProtKB/Swiss-Prot:P69681" /db_xref="EcoGene:EG11821" /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF MTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINW LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA FIGYKLADLTVGLRVPEEQEREGLDVNSHGENAYNA" repeat_region 358997..359019 /note="REP42 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(359027..359887) /gene="tesB" /locus_tag="b0452" /gene_synonym="ECK0446" /gene_synonym="JW0442" /db_xref="EcoGene:EG10995" CDS complement(359027..359887) /gene="tesB" /locus_tag="b0452" /gene_synonym="ECK0446" /gene_synonym="JW0442" /EC_number="3.1.2.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase 2" /protein_id="AAC73555.1" /db_xref="GI:1786657" /db_xref="ASAP:ABE-0001566" /db_xref="UniProtKB/Swiss-Prot:P0AGG2" /db_xref="EcoGene:EG10995" /translation="MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST VQEGVMRNHN" gene 360105..360677 /gene="ybaY" /locus_tag="b0453" /gene_synonym="ECK0447" /gene_synonym="JW0443" /db_xref="EcoGene:EG13253" CDS 360105..360677 /gene="ybaY" /locus_tag="b0453" /gene_synonym="ECK0447" /gene_synonym="JW0443" /function="phenotype; Not classified" /note="glycoprotein/polysaccharide metabolism; GO_process: GO:0042158 - lipoprotein biosynthetic process; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="AAC73556.1" /db_xref="GI:1786658" /db_xref="ASAP:ABE-0001574" /db_xref="UniProtKB/Swiss-Prot:P77717" /db_xref="EcoGene:EG13253" /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV LSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV QASGGATTTVPSTSPTQVNPSSAVPAPTQY" gene complement(360708..361097) /gene="ybaZ" /locus_tag="b0454" /gene_synonym="ECK0448" /gene_synonym="JW0444" /db_xref="EcoGene:EG13254" CDS complement(360708..361097) /gene="ybaZ" /locus_tag="b0454" /gene_synonym="ECK0448" /gene_synonym="JW0444" /codon_start=1 /transl_table=11 /product="excision repair protein, alkyltransferase-like protein ATL" /protein_id="AAC73557.1" /db_xref="GI:1786659" /db_xref="ASAP:ABE-0001576" /db_xref="UniProtKB/Swiss-Prot:P0AFP2" /db_xref="EcoGene:EG13254" /translation="MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAI PEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQR QRQALLAEGVMVSGSGQIDLQRYRWNY" gene 361174..361287 /gene="ffs" /locus_tag="b0455" /gene_synonym="ECK0449" /gene_synonym="JWR0009" /db_xref="EcoGene:EG30027" ncRNA 361174..361287 /ncRNA_class="SRP_RNA" /gene="ffs" /locus_tag="b0455" /gene_synonym="ECK0449" /gene_synonym="JWR0009" /product="4.5S sRNA component of Signal Recognition Particle (SRP)" /note="4.5S RNA; component of ribonucleoprotein particle; works with the Ffh protein; adjusted endpoints to reflect the mature 4.5S RNA (114 nt)" /function="2.2.6 information transfer; RNA related; rRNA, stable RNA" /function="2.3.2 information transfer; protein related; translation" /function="7.1 location of gene products; cytoplasm" /function="component of Signal Recognition Particle (SRP) with the Ffh protein; involved in co-translational targeting of proteins to membranes" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:ABE-0001579" /db_xref="EcoGene:EG30027" gene 361398..361751 /gene="ybaA" /locus_tag="b0456" /gene_synonym="ECK0450" /gene_synonym="JW0445" /db_xref="EcoGene:EG11099" CDS 361398..361751 /gene="ybaA" /locus_tag="b0456" /gene_synonym="ECK0450" /gene_synonym="JW0445" /codon_start=1 /transl_table=11 /product="DUF1428 family protein" /protein_id="AAC73558.1" /db_xref="GI:1786661" /db_xref="ASAP:ABE-0001582" /db_xref="UniProtKB/Swiss-Prot:P0AAQ6" /db_xref="EcoGene:EG11099" /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD GKRMIYGGFESIIDE" gene complement(361793..363343) /gene="ylaB" /locus_tag="b0457" /gene_synonym="ECK0451" /gene_synonym="JW5062" /db_xref="EcoGene:EG14237" CDS complement(361793..363343) /gene="ylaB" /locus_tag="b0457" /gene_synonym="ECK0451" /gene_synonym="JW5062" /codon_start=1 /transl_table=11 /product="putative membrane-anchored cyclic-di-GMP phosphodiesterase" /protein_id="AAC73559.2" /db_xref="GI:87081743" /db_xref="ASAP:ABE-0001584" /db_xref="UniProtKB/Swiss-Prot:P77473" /db_xref="EcoGene:EG14237" /translation="MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTY SSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNV PQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP LPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL TLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIAL ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF LRWAEQHL" gene complement(363507..363977) /gene="ylaC" /locus_tag="b0458" /gene_synonym="ECK0452" /gene_synonym="JW5063" /db_xref="EcoGene:EG14238" CDS complement(363507..363977) /gene="ylaC" /locus_tag="b0458" /gene_synonym="ECK0452" /gene_synonym="JW5063" /codon_start=1 /transl_table=11 /product="DUF1449 family inner membrane protein" /protein_id="AAC73560.2" /db_xref="GI:87081744" /db_xref="ASAP:ABE-0001587" /db_xref="UniProtKB/Swiss-Prot:P0AAS0" /db_xref="EcoGene:EG14238" /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS" gene complement(364093..364644) /gene="maa" /locus_tag="b0459" /gene_synonym="ECK0453" /gene_synonym="JW0448" /gene_synonym="ylaD" /db_xref="EcoGene:EG14239" CDS complement(364093..364644) /gene="maa" /locus_tag="b0459" /gene_synonym="ECK0453" /gene_synonym="JW0448" /gene_synonym="ylaD" /EC_number="2.3.1.79" /function="putative enzyme; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="maltose O-acetyltransferase" /protein_id="AAC73561.1" /db_xref="GI:1786664" /db_xref="ASAP:ABE-0001591" /db_xref="UniProtKB/Swiss-Prot:P77791" /db_xref="EcoGene:EG14239" /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA VVTKDVPDNVVVGGNPARIIKKL" gene complement(364816..365034) /gene="hha" /locus_tag="b0460" /gene_synonym="ECK0454" /gene_synonym="JW0449" /db_xref="EcoGene:EG10439" CDS complement(364816..365034) /gene="hha" /locus_tag="b0460" /gene_synonym="ECK0454" /gene_synonym="JW0449" /function="regulator; Proteins - translation and modification" /note="haemolysin expression modulating protein; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="modulator of gene expression, with H-NS" /protein_id="AAC73562.1" /db_xref="GI:1786665" /db_xref="ASAP:ABE-0001594" /db_xref="UniProtKB/Swiss-Prot:P0ACE3" /db_xref="EcoGene:EG10439" /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY SAADHRLAELTMNKLYDKIPSSVWKFIR" gene complement(365060..365434) /gene="tomB" /locus_tag="b0461" /gene_synonym="ECK0455" /gene_synonym="JW0450" /gene_synonym="ybaJ" /db_xref="EcoGene:EG12429" CDS complement(365060..365434) /gene="tomB" /locus_tag="b0461" /gene_synonym="ECK0455" /gene_synonym="JW0450" /gene_synonym="ybaJ" /codon_start=1 /transl_table=11 /product="Hha toxicity attenuator; conjugation-related protein" /protein_id="AAC73563.1" /db_xref="GI:1786666" /db_xref="ASAP:ABE-0001596" /db_xref="UniProtKB/Swiss-Prot:P0AAR0" /db_xref="EcoGene:EG12429" /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAI NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK SGNRLFRCFVNATKENPASLSC" gene complement(365980..369129) /gene="acrB" /locus_tag="b0462" /gene_synonym="acrE" /gene_synonym="ECK0456" /gene_synonym="JW0451" /db_xref="EcoGene:EG11704" CDS complement(365980..369129) /gene="acrB" /locus_tag="b0462" /gene_synonym="acrE" /gene_synonym="ECK0456" /gene_synonym="JW0451" /function="transport; Drug/analog sensitivity" /note="acridine efflux pump; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="AAC73564.1" /db_xref="GI:1786667" /db_xref="ASAP:ABE-0001601" /db_xref="UniProtKB/Swiss-Prot:P31224" /db_xref="EcoGene:EG11704" /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR RRFSRKNEDIEHSHTVDHH" gene complement(369152..370345) /gene="acrA" /locus_tag="b0463" /gene_synonym="ECK0457" /gene_synonym="JW0452" /gene_synonym="lir" /gene_synonym="Mb" /gene_synonym="mbl" /gene_synonym="mtcA" /gene_synonym="nbsA" /gene_synonym="sipB" /db_xref="EcoGene:EG11703" CDS complement(369152..370345) /gene="acrA" /locus_tag="b0463" /gene_synonym="ECK0457" /gene_synonym="JW0452" /gene_synonym="lir" /gene_synonym="Mb" /gene_synonym="mbl" /gene_synonym="mtcA" /gene_synonym="nbsA" /gene_synonym="sipB" /function="transport; Drug/analog sensitivity" /note="acridine efflux pump; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system" /protein_id="AAC73565.1" /db_xref="GI:1786668" /db_xref="ASAP:ABE-0001603" /db_xref="UniProtKB/Swiss-Prot:P0AE06" /db_xref="EcoGene:EG11703" /translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA KAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP EQSKS" gene 370487..371134 /gene="acrR" /locus_tag="b0464" /gene_synonym="ECK0458" /gene_synonym="JW0453" /gene_synonym="ybaH" /db_xref="EcoGene:EG12116" CDS 370487..371134 /gene="acrR" /locus_tag="b0464" /gene_synonym="ECK0458" /gene_synonym="JW0453" /gene_synonym="ybaH" /function="regulator; Drug/analog sensitivity" /note="acrAB operon repressor; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="transcriptional repressor" /protein_id="AAC73566.1" /db_xref="GI:1786669" /db_xref="ASAP:ABE-0001608" /db_xref="UniProtKB/Swiss-Prot:P0ACS9" /db_xref="EcoGene:EG12116" /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE" gene 371262..374624 /gene="mscK" /locus_tag="b0465" /gene_synonym="aefA" /gene_synonym="ECK0459" /gene_synonym="JW0454" /gene_synonym="kefA" /gene_synonym="pnuH" /db_xref="EcoGene:EG14240" CDS 371262..374624 /gene="mscK" /locus_tag="b0465" /gene_synonym="aefA" /gene_synonym="ECK0459" /gene_synonym="JW0454" /gene_synonym="kefA" /gene_synonym="pnuH" /note="mechanosensitive channel protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, intermediate conductance, K+ regulated" /protein_id="AAC73567.1" /db_xref="GI:1786670" /db_xref="ASAP:ABE-0001613" /db_xref="UniProtKB/Swiss-Prot:P77338" /db_xref="EcoGene:EG14240" /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK ADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWQKAWPAVFIAFL AGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQ TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM FALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG" repeat_region 374685..374782 /note="RIP43 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(374836..374997) /gene="ybaM" /locus_tag="b0466" /gene_synonym="ECK0460" /gene_synonym="JW0455" /db_xref="EcoGene:EG12830" CDS complement(374836..374997) /gene="ybaM" /locus_tag="b0466" /gene_synonym="ECK0460" /gene_synonym="JW0455" /codon_start=1 /transl_table=11 /product="DUF2496 family protein" /protein_id="AAC73568.1" /db_xref="GI:1786672" /db_xref="ASAP:ABE-0001616" /db_xref="UniProtKB/Swiss-Prot:P45807" /db_xref="EcoGene:EG12830" /translation="MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKK LTRDDEAEK" gene complement(375011..375538) /gene="priC" /locus_tag="b0467" /gene_synonym="ECK0461" /gene_synonym="JW0456" /db_xref="EcoGene:EG10765" CDS complement(375011..375538) /gene="priC" /locus_tag="b0467" /gene_synonym="ECK0461" /gene_synonym="JW0456" /function="factor; DNA - replication, repair, restriction/modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="primosomal replication protein N''" /protein_id="AAC73569.1" /db_xref="GI:1786673" /db_xref="ASAP:ABE-0001619" /db_xref="UniProtKB/Swiss-Prot:P23862" /db_xref="EcoGene:EG10765" /translation="MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRAT TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR HALEKIENRLARLTR" gene 375608..375985 /gene="ybaN" /locus_tag="b0468" /gene_synonym="ECK0462" /gene_synonym="JW0457" /db_xref="EcoGene:EG12843" CDS 375608..375985 /gene="ybaN" /locus_tag="b0468" /gene_synonym="ECK0462" /gene_synonym="JW0457" /function="orf; Not classified" /note="putative gene 58" /codon_start=1 /transl_table=11 /product="DUF454 family inner membrane protein" /protein_id="AAC73570.1" /db_xref="GI:1786674" /db_xref="ASAP:ABE-0001625" /db_xref="UniProtKB/Swiss-Prot:P0AAR5" /db_xref="EcoGene:EG12843" /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL VILACLLFYMWRIPVIDEKQEKH" gene 376138..376689 /gene="apt" /locus_tag="b0469" /gene_synonym="ECK0463" /gene_synonym="JW0458" /db_xref="EcoGene:EG10051" CDS 376138..376689 /gene="apt" /locus_tag="b0469" /gene_synonym="ECK0463" /gene_synonym="JW0458" /EC_number="2.4.2.7" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 9573169" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="AAC73571.1" /db_xref="GI:1786675" /db_xref="ASAP:ABE-0001628" /db_xref="UniProtKB/Swiss-Prot:P69503" /db_xref="EcoGene:EG10051" /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD LGGEQRLEKQGITSYSLVPFPGH" gene 376818..378749 /gene="dnaX" /locus_tag="b0470" /gene_synonym="dnaZ" /gene_synonym="ECK0464" /gene_synonym="JW0459" /db_xref="EcoGene:EG10245" CDS 376818..378749 /gene="dnaX" /locus_tag="b0470" /gene_synonym="dnaZ" /gene_synonym="ECK0464" /gene_synonym="JW0459" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA polymerase III, tau and gamma subunits; DNA elongation factor III; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III/DNA elongation factor III, tau and gamma subunits" /protein_id="AAC73572.1" /db_xref="GI:1786676" /db_xref="ASAP:ABE-0001633" /db_xref="UniProtKB/Swiss-Prot:P06710" /db_xref="EcoGene:EG10245" /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNR GAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI QTLRRFFDAELDEESIRPI" gene 378802..379131 /gene="ybaB" /locus_tag="b0471" /gene_synonym="ECK0465" /gene_synonym="efbC" /gene_synonym="JW0460" /db_xref="EcoGene:EG11100" CDS 378802..379131 /gene="ybaB" /locus_tag="b0471" /gene_synonym="ECK0465" /gene_synonym="efbC" /gene_synonym="JW0460" /function="factor; DNA - replication, repair, restriction/modification" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative nucleoid-associated protein" /protein_id="AAC73573.1" /db_xref="GI:1786677" /db_xref="ASAP:ABE-0001636" /db_xref="UniProtKB/Swiss-Prot:P0A8B5" /db_xref="EcoGene:EG11100" /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP PGFKMPF" gene 379131..379736 /gene="recR" /locus_tag="b0472" /gene_synonym="ECK0466" /gene_synonym="JW0461" /db_xref="EcoGene:EG10834" CDS 379131..379736 /gene="recR" /locus_tag="b0472" /gene_synonym="ECK0466" /gene_synonym="JW0461" /function="putative enzyme; DNA - replication, repair, restriction/modification" /note="recombination and repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="gap repair protein" /protein_id="AAC73574.1" /db_xref="GI:1786678" /db_xref="ASAP:ABE-0001638" /db_xref="UniProtKB/Swiss-Prot:P0A7H6" /db_xref="EcoGene:EG10834" /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF" gene 379846..381720 /gene="htpG" /locus_tag="b0473" /gene_synonym="ECK0467" /gene_synonym="JW0462" /db_xref="EcoGene:EG10461" CDS 379846..381720 /gene="htpG" /locus_tag="b0473" /gene_synonym="ECK0467" /gene_synonym="JW0462" /function="factor; Chaperones" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="chaperone Hsp90, heat shock protein C 62.5; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase" /protein_id="AAC73575.1" /db_xref="GI:1786679" /db_xref="ASAP:ABE-0001642" /db_xref="UniProtKB/Swiss-Prot:P0A6Z3" /db_xref="EcoGene:EG10461" /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS " repeat_region 381727..381752 /note="REP44 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 381901..382545 /gene="adk" /locus_tag="b0474" /gene_synonym="dnaW" /gene_synonym="ECK0468" /gene_synonym="JW0463" /gene_synonym="plsA" /db_xref="EcoGene:EG10032" CDS 381901..382545 /gene="adk" /locus_tag="b0474" /gene_synonym="dnaW" /gene_synonym="ECK0468" /gene_synonym="JW0463" /gene_synonym="plsA" /EC_number="2.7.4.3" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3027060,8650159,9298646,9600841" /note="adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO_process: GO:0009152 - purine ribonucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="adenylate kinase" /protein_id="AAC73576.1" /db_xref="GI:1786680" /db_xref="ASAP:ABE-0001645" /db_xref="UniProtKB/Swiss-Prot:P69441" /db_xref="EcoGene:EG10032" /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG" repeat_region 382642..382659 /note="REP45 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 382781..383743 /gene="hemH" /locus_tag="b0475" /gene_synonym="ECK0469" /gene_synonym="JW0464" /gene_synonym="popA" /gene_synonym="visA" /db_xref="EcoGene:EG10431" CDS 382781..383743 /gene="hemH" /locus_tag="b0475" /gene_synonym="ECK0469" /gene_synonym="JW0464" /gene_synonym="popA" /gene_synonym="visA" /EC_number="4.99.1.1" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /experiment="N-terminus verified by Edman degradation: PMID 8056770" /note="ferrochelatase: final enzyme of heme biosynthesis" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="AAC73577.1" /db_xref="GI:1786681" /db_xref="ASAP:ABE-0001649" /db_xref="UniProtKB/Swiss-Prot:P23871" /db_xref="EcoGene:EG10431" /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSY GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR" gene complement(383740..384699) /gene="aes" /locus_tag="b0476" /gene_synonym="ECK0470" /gene_synonym="JW0465" /gene_synonym="ybaC" /db_xref="EcoGene:EG11101" CDS complement(383740..384699) /gene="aes" /locus_tag="b0476" /gene_synonym="ECK0470" /gene_synonym="JW0465" /gene_synonym="ybaC" /EC_number="3.1.1.-" /function="orf; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9576853" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="acetyl esterase" /protein_id="AAC73578.1" /db_xref="GI:1786682" /db_xref="ASAP:ABE-0001651" /db_xref="UniProtKB/Swiss-Prot:P23872" /db_xref="EcoGene:EG11101" /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGTIAEQRQYY TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT HDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL" gene 384851..386155 /gene="gsk" /locus_tag="b0477" /gene_synonym="ECK0471" /gene_synonym="JW0466" /db_xref="EcoGene:EG11102" CDS 384851..386155 /gene="gsk" /locus_tag="b0477" /gene_synonym="ECK0471" /gene_synonym="JW0466" /EC_number="2.7.1.73" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 7721718" /note="inosine-guanosine kinase; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="inosine/guanosine kinase" /protein_id="AAC73579.1" /db_xref="GI:1786684" /db_xref="ASAP:ABE-0001655" /db_xref="UniProtKB/Swiss-Prot:P0AEW6" /db_xref="EcoGene:EG11102" /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR" repeat_region 386170..386253 /note="REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(386288..387964) /gene="ybaL" /locus_tag="b0478" /gene_synonym="ECK0472" /gene_synonym="JW0467" /gene_synonym="ylaA" /db_xref="EcoGene:EG12623" CDS complement(386288..387964) /gene="ybaL" /locus_tag="b0478" /gene_synonym="ECK0472" /gene_synonym="JW0467" /gene_synonym="ylaA" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="inner membrane putative NAD(P)-binding transporter" /protein_id="AAC73580.1" /db_xref="GI:1786685" /db_xref="ASAP:ABE-0001658" /db_xref="UniProtKB/Swiss-Prot:P39830" /db_xref="EcoGene:EG12623" /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS AATGSRELFTLSVLALALGVAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG" gene complement(388202..389422) /gene="fsr" /locus_tag="b0479" /gene_synonym="ECK0473" /gene_synonym="JW0468" /db_xref="EcoGene:EG13268" CDS complement(388202..389422) /gene="fsr" /locus_tag="b0479" /gene_synonym="ECK0473" /gene_synonym="JW0468" /function="putative transport; Not classified" /note="fosmidomycin resistance protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="putative fosmidomycin efflux system protein" /protein_id="AAC73581.1" /db_xref="GI:1786686" /db_xref="ASAP:ABE-0001661" /db_xref="UniProtKB/Swiss-Prot:P52067" /db_xref="EcoGene:EG13268" /translation="MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN PLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFS AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLL GMLTIFLPDNRHKD" gene 389640..391292 /gene="ushA" /locus_tag="b0480" /gene_synonym="ECK0474" /gene_synonym="JW0469" /db_xref="EcoGene:EG11060" CDS 389640..391292 /gene="ushA" /locus_tag="b0480" /gene_synonym="ECK0474" /gene_synonym="JW0469" /EC_number="3.6.1.45" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="UDP-sugar hydrolase (5'-nucleotidase); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="bifunctional UDP-sugar hydrolase/5'-nucleotidase" /protein_id="AAC73582.1" /db_xref="GI:1786687" /db_xref="ASAP:ABE-0001668" /db_xref="UniProtKB/Swiss-Prot:P07024" /db_xref="EcoGene:EG11060" /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR QDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHM GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCK PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV AQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ" repeat_region 391302..391321 /note="REP47 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(391329..391808) /gene="ybaK" /locus_tag="b0481" /gene_synonym="ECK0475" /gene_synonym="JW0470" /gene_synonym="proX" /db_xref="EcoGene:EG12454" CDS complement(391329..391808) /gene="ybaK" /locus_tag="b0481" /gene_synonym="ECK0475" /gene_synonym="JW0470" /gene_synonym="proX" /codon_start=1 /transl_table=11 /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase" /protein_id="AAC73583.1" /db_xref="GI:1786688" /db_xref="ASAP:ABE-0001670" /db_xref="UniProtKB/Swiss-Prot:P0AAR3" /db_xref="EcoGene:EG12454" /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGG ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD" gene 391930..392013 /gene="chiX" /locus_tag="b4585" /gene_synonym="ECK4396" /gene_synonym="er13" /gene_synonym="micM" /gene_synonym="rybC" /gene_synonym="sroB" /db_xref="EcoGene:EG31175" ncRNA 391930..392013 /ncRNA_class="antisense_RNA" /gene="chiX" /locus_tag="b4585" /gene_synonym="ECK4396" /gene_synonym="er13" /gene_synonym="micM" /gene_synonym="rybC" /gene_synonym="sroB" /product="sRNA antisense regulator of OM chitoporin ChiP(YbfM), Hfq-dependent" /db_xref="EcoGene:EG31175" gene complement(392012..392806) /gene="ybaP" /locus_tag="b0482" /gene_synonym="ECK0476" /gene_synonym="JW0471" /db_xref="EcoGene:EG13244" CDS complement(392012..392806) /gene="ybaP" /locus_tag="b0482" /gene_synonym="ECK0476" /gene_synonym="JW0471" /note="putative ligase" /codon_start=1 /transl_table=11 /product="TraB family protein" /protein_id="AAC73584.1" /db_xref="GI:1786689" /db_xref="ASAP:ABE-0001673" /db_xref="UniProtKB/Swiss-Prot:P77301" /db_xref="EcoGene:EG13244" /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS HDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHIS QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR" gene 392944..393285 /gene="ybaQ" /locus_tag="b0483" /gene_synonym="ECK0477" /gene_synonym="JW0472" /db_xref="EcoGene:EG13245" CDS 392944..393285 /gene="ybaQ" /locus_tag="b0483" /gene_synonym="ECK0477" /gene_synonym="JW0472" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC73585.2" /db_xref="GI:87081745" /db_xref="ASAP:ABE-0001677" /db_xref="UniProtKB/Swiss-Prot:P0A9T6" /db_xref="EcoGene:EG13245" /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSAL INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL ARREERAKKVA" repeat_region 393308..393543 /note="REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences" gene complement(393601..396105) /gene="copA" /locus_tag="b0484" /gene_synonym="ECK0478" /gene_synonym="JW0473" /gene_synonym="ybaR" /db_xref="EcoGene:EG13246" CDS complement(393601..396105) /gene="copA" /locus_tag="b0484" /gene_synonym="ECK0478" /gene_synonym="JW0473" /gene_synonym="ybaR" /EC_number="3.6.3.4" /function="putative enzyme; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /codon_start=1 /transl_table=11 /product="copper transporter" /protein_id="AAC73586.1" /db_xref="GI:1786691" /db_xref="ASAP:ABE-0001681" /db_xref="UniProtKB/Swiss-Prot:Q59385" /db_xref="EcoGene:EG13246" /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEK SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGT VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALV SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKAIEAEITA QASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA IAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG SDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLGAFIYNSIGIPVAAGILWP FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE" gene 396367..397299 /gene="glsA" /locus_tag="b0485" /gene_synonym="ECK0479" /gene_synonym="glsA1" /gene_synonym="JW0474" /gene_synonym="ybaS" /db_xref="EcoGene:EG13247" CDS 396367..397299 /gene="glsA" /locus_tag="b0485" /gene_synonym="ECK0479" /gene_synonym="glsA1" /gene_synonym="JW0474" /gene_synonym="ybaS" /function="enzyme; l-glutamine catabolism" /note="putative glutaminase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="glutaminase 1" /protein_id="AAC73587.1" /db_xref="GI:1786693" /db_xref="ASAP:ABE-0001688" /db_xref="UniProtKB/Swiss-Prot:P77454" /db_xref="EcoGene:EG13247" /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI ALELHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQS EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVN PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI AAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG" gene 397302..398594 /gene="ybaT" /locus_tag="b0486" /gene_synonym="ECK0480" /gene_synonym="JW0475" /db_xref="EcoGene:EG13248" CDS 397302..398594 /gene="ybaT" /locus_tag="b0486" /gene_synonym="ECK0480" /gene_synonym="JW0475" /function="putative transport; Not classified" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="putative amino acid transporter" /protein_id="AAC73588.1" /db_xref="GI:1786694" /db_xref="ASAP:ABE-0001690" /db_xref="UniProtKB/Swiss-Prot:P77400" /db_xref="EcoGene:EG13248" /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL AVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV" gene 398719..399126 /gene="cueR" /locus_tag="b0487" /gene_synonym="ECK0481" /gene_synonym="JW0476" /gene_synonym="ybbI" /db_xref="EcoGene:EG13256" CDS 398719..399126 /gene="cueR" /locus_tag="b0487" /gene_synonym="ECK0481" /gene_synonym="JW0476" /gene_synonym="ybbI" /function="putative transport; Not classified" /note="GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="copper-responsive regulon transcriptional regulator" /protein_id="AAC73589.1" /db_xref="GI:1786695" /db_xref="ASAP:ABE-0001693" /db_xref="UniProtKB/Swiss-Prot:P0A9G4" /db_xref="EcoGene:EG13256" /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR DQLLALANACPGDDSADCPIIENLSGCCHHRAG" gene complement(399127..399585) /gene="ybbJ" /locus_tag="b0488" /gene_synonym="ECK0482" /gene_synonym="JW5065" /db_xref="EcoGene:EG13257" CDS complement(399127..399585) /gene="ybbJ" /locus_tag="b0488" /gene_synonym="ECK0482" /gene_synonym="JW5065" /codon_start=1 /transl_table=11 /product="inner membrane protein; stimulator of the QmcA suppressor of ftsH-htpX" /protein_id="AAC73590.2" /db_xref="GI:145693099" /db_xref="ASAP:ABE-0001695" /db_xref="UniProtKB/Swiss-Prot:P0AAS3" /db_xref="EcoGene:EG13257" /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS" gene complement(399582..400499) /gene="qmcA" /locus_tag="b0489" /gene_synonym="ECK0483" /gene_synonym="JW0478" /gene_synonym="ybbK" /db_xref="EcoGene:EG13258" CDS complement(399582..400499) /gene="qmcA" /locus_tag="b0489" /gene_synonym="ECK0483" /gene_synonym="JW0478" /gene_synonym="ybbK" /function="putative enzyme; Not classified" /note="putative protease; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="PHB domain membrane-anchored putative protease" /protein_id="AAC73591.1" /db_xref="GI:1786697" /db_xref="ASAP:ABE-0001697" /db_xref="UniProtKB/Swiss-Prot:P0AA53" /db_xref="EcoGene:EG13258" /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM MPLEASSLMGSIAGIAELVKDSANKRTQP" gene 400645..401322 /gene="fetA" /locus_tag="b0490" /gene_synonym="ECK0484" /gene_synonym="JW0479" /gene_synonym="ybbL" /db_xref="EcoGene:EG13259" CDS 400645..401322 /gene="fetA" /locus_tag="b0490" /gene_synonym="ECK0484" /gene_synonym="JW0479" /gene_synonym="ybbL" /function="transport; Transport of small molecules: Cations" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="iron export ABC transporter ATPase; peroxide resistance protein" /protein_id="AAC73592.1" /db_xref="GI:1786698" /db_xref="ASAP:ABE-0001703" /db_xref="UniProtKB/Swiss-Prot:P77279" /db_xref="EcoGene:EG13259" /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ EARYELA" gene 401309..402088 /gene="fetB" /locus_tag="b0491" /gene_synonym="ECK0485" /gene_synonym="JW5066" /gene_synonym="ybbM" /db_xref="EcoGene:EG13260" CDS 401309..402088 /gene="fetB" /locus_tag="b0491" /gene_synonym="ECK0485" /gene_synonym="JW5066" /gene_synonym="ybbM" /function="transport; Transport of small molecules: Cations" /note="putative metal resistance protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="iron export ABC transporter permease; peroxide resistance protein" /protein_id="AAC73593.2" /db_xref="GI:87081746" /db_xref="ASAP:ABE-0001705" /db_xref="UniProtKB/Swiss-Prot:P77307" /db_xref="EcoGene:EG13260" /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAI IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK" repeat_region 402095..402120 /note="REP49 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(402151..403005) /gene="ybbN" /locus_tag="b0492" /gene_synonym="ECK0486" /gene_synonym="JW5067" /db_xref="EcoGene:EG13261" CDS complement(402151..403005) /gene="ybbN" /locus_tag="b0492" /gene_synonym="ECK0486" /gene_synonym="JW5067" /function="putative enzyme; Not classified" /note="putative thioredoxin-like protein" /codon_start=1 /transl_table=11 /product="DnaK co-chaperone, thioredoxin-like protein" /protein_id="AAC73594.2" /db_xref="GI:87081747" /db_xref="ASAP:ABE-0001707" /db_xref="UniProtKB/Swiss-Prot:P77395" /db_xref="EcoGene:EG13261" /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI RALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR RQLYALLY" gene complement(403066..403875) /gene="ybbO" /locus_tag="b0493" /gene_synonym="ECK0487" /gene_synonym="JW0482" /db_xref="EcoGene:EG13262" CDS complement(403066..403875) /gene="ybbO" /locus_tag="b0493" /gene_synonym="ECK0487" /gene_synonym="JW0482" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC73595.1" /db_xref="GI:1786701" /db_xref="ASAP:ABE-0001709" /db_xref="UniProtKB/Swiss-Prot:P0AFP4" /db_xref="EcoGene:EG13262" /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA GCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG" gene complement(403865..404491) /gene="tesA" /locus_tag="b0494" /gene_synonym="apeA" /gene_synonym="ECK0488" /gene_synonym="JW0483" /gene_synonym="pldC" /db_xref="EcoGene:EG11542" CDS complement(403865..404491) /gene="tesA" /locus_tag="b0494" /gene_synonym="apeA" /gene_synonym="ECK0488" /gene_synonym="JW0483" /gene_synonym="pldC" /EC_number="3.1.1.5" /EC_number="3.1.2.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="acyl-CoA thioesterase I; also functions as protease I; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase 1 and protease I and lysophospholipase L1" /protein_id="AAC73596.1" /db_xref="GI:1786702" /db_xref="ASAP:ABE-0001713" /db_xref="UniProtKB/Swiss-Prot:P0ADA1" /db_xref="EcoGene:EG11542" /translation="MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMS ASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGL RGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDV PLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS" gene 404459..405145 /gene="ybbA" /locus_tag="b0495" /gene_synonym="ECK0489" /gene_synonym="JW0484" /db_xref="EcoGene:EG11657" CDS 404459..405145 /gene="ybbA" /locus_tag="b0495" /gene_synonym="ECK0489" /gene_synonym="JW0484" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC73597.1" /db_xref="GI:1786703" /db_xref="ASAP:ABE-0001717" /db_xref="UniProtKB/Swiss-Prot:P0A9T8" /db_xref="EcoGene:EG11657" /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR LVNGQLQEEA" gene 405142..407556 /gene="ybbP" /locus_tag="b0496" /gene_synonym="ECK0490" /gene_synonym="JW0485" /db_xref="EcoGene:EG13263" CDS 405142..407556 /gene="ybbP" /locus_tag="b0496" /gene_synonym="ECK0490" /gene_synonym="JW0485" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC73598.1" /db_xref="GI:1786704" /db_xref="ASAP:ABE-0001720" /db_xref="UniProtKB/Swiss-Prot:P77504" /db_xref="EcoGene:EG13263" /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI LKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASL WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVL LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQP WSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAF LAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNW PPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFP EGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALE VMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSG LVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKAL FRQFAG" gene 407987..412267 /gene="rhsD" /locus_tag="b0497" /gene_synonym="ECK0491" /gene_synonym="JW0486" /db_xref="EcoGene:EG10849" CDS 407987..412267 /gene="rhsD" /locus_tag="b0497" /gene_synonym="ECK0491" /gene_synonym="JW0486" /note="rhsD protein in rhs element" /codon_start=1 /transl_table=11 /product="Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor" /protein_id="AAC73599.1" /db_xref="GI:1786706" /db_xref="ASAP:ABE-0001724" /db_xref="UniProtKB/Swiss-Prot:P16919" /db_xref="EcoGene:EG10849" /translation="MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMT SGNPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDI RLQLRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWG ALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRVLTGMADRFGR TLTYRREAAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSAS AFPDTLPGTEYGPDRGIRLSAVWLMHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSN TQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRIT VTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGL NVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGE TVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTA VHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAW GKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSVFSYDALDRLVQQGGFDGRTQRYH YDLTGKLTQSEDEGLVILWYYDESDRITHRTVNGEPAEQWQYDGHGWLTDISHLSEGH RVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYNEQGLANRVTPDSLPPVEW LTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQS QHLNSLVYDRDYGWSDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYAT DPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDD ERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLS RKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAET LQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEP EYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVYQPYRLPG QQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQTW DDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVCKDT NGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKNL VRSKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD" gene 412307..412675 /gene="ybbC" /locus_tag="b0498" /gene_synonym="ECK0492" /gene_synonym="JW0487" /db_xref="EcoGene:EG11769" CDS 412307..412675 /gene="ybbC" /locus_tag="b0498" /gene_synonym="ECK0492" /gene_synonym="JW0487" /codon_start=1 /transl_table=11 /product="putative immunity protein" /protein_id="AAC73600.1" /db_xref="GI:1786707" /db_xref="ASAP:ABE-0001726" /db_xref="UniProtKB/Swiss-Prot:P33668" /db_xref="EcoGene:EG11769" /translation="MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKY SVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGG VFIIEINKKNGCVLNFLHSK" gene 412678..413385 /gene="rhsH" /locus_tag="b0499" /gene_synonym="ECK0493" /gene_synonym="JW0488" /gene_synonym="ylbH" /pseudo /db_xref="EcoGene:EG14327" CDS 412678..413385 /gene="rhsH" /locus_tag="b0499" /gene_synonym="ECK0493" /gene_synonym="JW0488" /gene_synonym="ylbH" /note="pseudogene, Rhs family C-terminal fragment with unique putative toxin domain" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001729" /db_xref="UniProtKB/Swiss-Prot:P77759" /db_xref="EcoGene:EG14327" gene 413366..413856 /gene="ybbD" /locus_tag="b0501" /gene_synonym="ECK0494" /gene_synonym="JW0489" /pseudo /db_xref="EcoGene:EG11770" CDS 413366..413856 /gene="ybbD" /locus_tag="b0501" /gene_synonym="ECK0494" /gene_synonym="JW0489" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001731" /db_xref="UniProtKB/Swiss-Prot:P33669" /db_xref="EcoGene:EG11770" gene 414226..414318 /gene="ylbI" /locus_tag="b4632" /gene_synonym="ECK4441" /pseudo /db_xref="EcoGene:EG14349" CDS 414226..414318 /gene="ylbI" /locus_tag="b4632" /gene_synonym="ECK4441" /note="pseudogene, Rhs family protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14349" gene complement(414321..414742) /gene="ylbG" /locus_tag="b0502" /gene_synonym="ECK0495" /gene_synonym="JW5880" /pseudo /db_xref="EcoGene:EG14285" CDS complement(join(414321..414386,414386..414742)) /gene="ylbG" /locus_tag="b0502" /gene_synonym="ECK0495" /gene_synonym="JW5880" /note="pseudogene, DNA-binding transcriptional regulator homology" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001736" /db_xref="UniProtKB/Swiss-Prot:P77688" /db_xref="EcoGene:EG14285" gene complement(414858..415952) /gene="mnmH" /locus_tag="b0503" /gene_synonym="ECK0496" /gene_synonym="JW0491" /gene_synonym="selE" /gene_synonym="selU" /gene_synonym="ybbB" /db_xref="EcoGene:EG11768" CDS complement(414858..415952) /gene="mnmH" /locus_tag="b0503" /gene_synonym="ECK0496" /gene_synonym="JW0491" /gene_synonym="selE" /gene_synonym="selU" /gene_synonym="ybbB" /function="enzyme; tRNA modification" /note="putative capsule anchoring protein" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase, selenophosphate-dependent" /protein_id="AAC73605.1" /db_xref="GI:1786712" /db_xref="ASAP:ABE-0001740" /db_xref="UniProtKB/Swiss-Prot:P33667" /db_xref="EcoGene:EG11768" /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEHGAMPAAINLPLMN NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQ RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDES RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ EYCEYLHHGLSAIKRRLGLQRYNELAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYD PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR" gene complement(416021..416947) /gene="allS" /locus_tag="b0504" /gene_synonym="ECK0497" /gene_synonym="glxA1" /gene_synonym="JW0492" /gene_synonym="ybbS" /db_xref="EcoGene:EG13267" CDS complement(416021..416947) /gene="allS" /locus_tag="b0504" /gene_synonym="ECK0497" /gene_synonym="glxA1" /gene_synonym="JW0492" /gene_synonym="ybbS" /function="regulator; Purine nitrogen catabolism" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="allD operon transcriptional activator" /protein_id="AAC73606.1" /db_xref="GI:1786713" /db_xref="ASAP:ABE-0001742" /db_xref="UniProtKB/Swiss-Prot:P0ACR0" /db_xref="EcoGene:EG13267" /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQK EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKF GSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS" gene 417177..417659 /gene="allA" /locus_tag="b0505" /gene_synonym="ECK0498" /gene_synonym="glxA2" /gene_synonym="JW0493" /gene_synonym="ybbT" /db_xref="EcoGene:EG13615" CDS 417177..417659 /gene="allA" /locus_tag="b0505" /gene_synonym="ECK0498" /gene_synonym="glxA2" /gene_synonym="JW0493" /gene_synonym="ybbT" /EC_number="4.3.2.3" /function="enzyme; Purine nitrogen catabolism" /note="GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="ureidoglycolate lyase, releasing urea" /protein_id="AAC73607.1" /db_xref="GI:1786714" /db_xref="ASAP:ABE-0001747" /db_xref="UniProtKB/Swiss-Prot:P77731" /db_xref="EcoGene:EG13615" /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV EILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA " gene 417737..418552 /gene="allR" /locus_tag="b0506" /gene_synonym="ECK0499" /gene_synonym="gclR" /gene_synonym="glxA3" /gene_synonym="JW0494" /gene_synonym="ybbU" /db_xref="EcoGene:EG13616" CDS 417737..418552 /gene="allR" /locus_tag="b0506" /gene_synonym="ECK0499" /gene_synonym="gclR" /gene_synonym="glxA3" /gene_synonym="JW0494" /gene_synonym="ybbU" /function="regulator; Purine nitrogen catabolism" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="glyoxylate-inducible transcriptional repressor of all and gcl operons" /protein_id="AAC73608.1" /db_xref="GI:1786715" /db_xref="ASAP:ABE-0001750" /db_xref="UniProtKB/Swiss-Prot:P0ACN4" /db_xref="EcoGene:EG13616" /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP" gene 418642..420423 /gene="gcl" /locus_tag="b0507" /gene_synonym="ECK0500" /gene_synonym="JW0495" /db_xref="EcoGene:EG11583" CDS 418642..420423 /gene="gcl" /locus_tag="b0507" /gene_synonym="ECK0500" /gene_synonym="JW0495" /EC_number="4.1.1.47" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="GO_process: GO:0009441 - glycolate metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="glyoxylate carboligase" /protein_id="AAC73609.1" /db_xref="GI:1786717" /db_xref="ASAP:ABE-0001754" /db_xref="UniProtKB/Swiss-Prot:P0AEP7" /db_xref="EcoGene:EG11583" /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE LDNVMEFEDIADNAADAPTETCFMHYE" gene 420436..421212 /gene="hyi" /locus_tag="b0508" /gene_synonym="ECK0501" /gene_synonym="gip" /gene_synonym="JW0496" /gene_synonym="ybbG" /db_xref="EcoGene:EG11584" CDS 420436..421212 /gene="hyi" /locus_tag="b0508" /gene_synonym="ECK0501" /gene_synonym="gip" /gene_synonym="JW0496" /gene_synonym="ybbG" /EC_number="5.3.1.22" /function="phenotype; Not classified" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="hydroxypyruvate isomerase" /protein_id="AAC73610.1" /db_xref="GI:1786718" /db_xref="ASAP:ABE-0001756" /db_xref="UniProtKB/Swiss-Prot:P30147" /db_xref="EcoGene:EG11584" /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEE LKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKI NCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQ ALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGE INYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR" gene 421312..422190 /gene="glxR" /locus_tag="b0509" /gene_synonym="ECK0502" /gene_synonym="glxB1" /gene_synonym="JW0497" /gene_synonym="ybbQ" /db_xref="EcoGene:EG13265" CDS 421312..422190 /gene="glxR" /locus_tag="b0509" /gene_synonym="ECK0502" /gene_synonym="glxB1" /gene_synonym="JW0497" /gene_synonym="ybbQ" /EC_number="1.1.1.60" /function="putative enzyme; Not classified" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009441 - glycolate metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="tartronate semialdehyde reductase, NADH-dependent" /protein_id="AAC73611.1" /db_xref="GI:1786719" /db_xref="ASAP:ABE-0001759" /db_xref="UniProtKB/Swiss-Prot:P77161" /db_xref="EcoGene:EG13265" /translation="MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAV SVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKR FARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVG GNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHG ERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDH SALVQALELMANHKLA" gene 422359..423813 /gene="ybbW" /locus_tag="b0511" /gene_synonym="allP" /gene_synonym="ECK0504" /gene_synonym="glxB2" /gene_synonym="JW0499" /db_xref="EcoGene:EG13618" CDS 422359..423813 /gene="ybbW" /locus_tag="b0511" /gene_synonym="allP" /gene_synonym="ECK0504" /gene_synonym="glxB2" /gene_synonym="JW0499" /function="putative transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative allantoin transporter" /protein_id="AAC73613.2" /db_xref="GI:87081749" /db_xref="ASAP:ABE-0001764" /db_xref="UniProtKB/Swiss-Prot:P75712" /db_xref="EcoGene:EG13618" /translation="MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVP NYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVR GALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI TFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSG IQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFA VAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAG YQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMM AHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLS RVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG" gene 423873..425234 /gene="allB" /locus_tag="b0512" /gene_synonym="ECK0505" /gene_synonym="glxB3" /gene_synonym="JW0500" /gene_synonym="ybbX" /db_xref="EcoGene:EG13619" CDS 423873..425234 /gene="allB" /locus_tag="b0512" /gene_synonym="ECK0505" /gene_synonym="glxB3" /gene_synonym="JW0500" /gene_synonym="ybbX" /EC_number="3.5.2.5" /function="enzyme; Purine nitrogen catabolism" /note="GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="allantoinase" /protein_id="AAC73614.1" /db_xref="GI:1786722" /db_xref="ASAP:ABE-0001768" /db_xref="UniProtKB/Swiss-Prot:P77671" /db_xref="EcoGene:EG13619" /translation="MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVM DASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDR ASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDND FRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVF TEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTD QFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGG IAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQ PNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILK HQQ" gene 425291..426592 /gene="ybbY" /locus_tag="b0513" /gene_synonym="ECK0506" /gene_synonym="glxB4" /gene_synonym="JW0501" /db_xref="EcoGene:EG13620" CDS 425291..426592 /gene="ybbY" /locus_tag="b0513" /gene_synonym="ECK0506" /gene_synonym="glxB4" /gene_synonym="JW0501" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="putative uracil/xanthine transporter" /protein_id="AAC73615.2" /db_xref="GI:87081750" /db_xref="ASAP:ABE-0001771" /db_xref="UniProtKB/Swiss-Prot:P77328" /db_xref="EcoGene:EG13620" /translation="MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLL TLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATS LAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFG IADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSH SLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTR YRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVP ALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMA LPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE" gene 426614..427759 /gene="glxK" /locus_tag="b0514" /gene_synonym="ECK0507" /gene_synonym="glxB5" /gene_synonym="JW0502" /gene_synonym="ybbZ" /db_xref="EcoGene:EG13621" CDS 426614..427759 /gene="glxK" /locus_tag="b0514" /gene_synonym="ECK0507" /gene_synonym="glxB5" /gene_synonym="JW0502" /gene_synonym="ybbZ" /EC_number="2.7.1.31" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009441 - glycolate metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="glycerate kinase II" /protein_id="AAC73616.1" /db_xref="GI:1786724" /db_xref="ASAP:ABE-0001773" /db_xref="UniProtKB/Swiss-Prot:P77364" /db_xref="EcoGene:EG13621" /translation="MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADG GEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPE KRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQA LAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEM VEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAV NLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVH QYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN" repeat_region 427813..427909 /note="RIP50 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(427987..428772) /gene="allE" /locus_tag="b0515" /gene_synonym="ECK0508" /gene_synonym="glxB6" /gene_synonym="JW0503" /gene_synonym="ughY" /gene_synonym="ylbA" /db_xref="EcoGene:EG13622" CDS complement(427987..428772) /gene="allE" /locus_tag="b0515" /gene_synonym="ECK0508" /gene_synonym="glxB6" /gene_synonym="JW0503" /gene_synonym="ughY" /gene_synonym="ylbA" /function="enzyme; Purine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="S-ureidoglycine aminohydrolase" /protein_id="AAC73617.1" /db_xref="GI:1786725" /db_xref="ASAP:ABE-0001775" /db_xref="UniProtKB/Swiss-Prot:P75713" /db_xref="EcoGene:EG13622" /translation="MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFEN CDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFA LSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYE GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI" gene complement(428783..430018) /gene="allC" /locus_tag="b0516" /gene_synonym="ECK0509" /gene_synonym="glxB7" /gene_synonym="JW0504" /gene_synonym="ylbB" /db_xref="EcoGene:EG13623" CDS complement(428783..430018) /gene="allC" /locus_tag="b0516" /gene_synonym="ECK0509" /gene_synonym="glxB7" /gene_synonym="JW0504" /gene_synonym="ylbB" /EC_number="3.5.3.4" /function="enzyme; Purine nitrogen catabolism" /note="GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="allantoate amidohydrolase" /protein_id="AAC73618.1" /db_xref="GI:1786726" /db_xref="ASAP:ABE-0001777" /db_xref="UniProtKB/Swiss-Prot:P77425" /db_xref="EcoGene:EG13623" /translation="MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFK KRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWL AIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNS FVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV TLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNV VPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKEL VATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITD LAEGVKTLALMLYQLAWQK" gene complement(430040..431089) /gene="allD" /locus_tag="b0517" /gene_synonym="ECK0510" /gene_synonym="glxB8" /gene_synonym="JW0505" /gene_synonym="ylbC" /db_xref="EcoGene:EG13624" CDS complement(430040..431089) /gene="allD" /locus_tag="b0517" /gene_synonym="ECK0510" /gene_synonym="glxB8" /gene_synonym="JW0505" /gene_synonym="ylbC" /EC_number="1.1.1.154" /function="enzyme; Purine nitrogen catabolism" /note="GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0009442 - allantoin assimilation pathway" /codon_start=1 /transl_table=11 /product="ureidoglycolate dehydrogenase" /protein_id="AAC73619.1" /db_xref="GI:1786727" /db_xref="ASAP:ABE-0001780" /db_xref="UniProtKB/Swiss-Prot:P77555" /db_xref="EcoGene:EG13624" /translation="MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSH GAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQ QNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLA FAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALL PAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSS ELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISD ALYNTSYETKNPFAQ" gene 431406..433073 /gene="fdrA" /locus_tag="b0518" /gene_synonym="ECK0511" /gene_synonym="JW0506" /gene_synonym="ylbD" /db_xref="EcoGene:EG13399" CDS 431406..433073 /gene="fdrA" /locus_tag="b0518" /gene_synonym="ECK0511" /gene_synonym="JW0506" /gene_synonym="ylbD" /function="transport; Protein, peptide secretion" /note="involved in protein transport; multicopy suppressor of dominant negative ftsH mutants; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative NAD(P)-binding acyl-CoA synthetase" /protein_id="AAC73620.1" /db_xref="GI:1786729" /db_xref="ASAP:ABE-0001784" /db_xref="UniProtKB/Swiss-Prot:Q47208" /db_xref="EcoGene:EG13399" /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKA LLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQAL TQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLK TRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGE GITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMK ATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFIC GLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMI DPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYA IATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLL ENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ" gene 433083..434342 /gene="ylbE" /locus_tag="b4572" /gene_synonym="ECK0512" /gene_synonym="JW0507" /gene_synonym="JW0508" /db_xref="EcoGene:EG13398" CDS 433083..434342 /gene="ylbE" /locus_tag="b4572" /gene_synonym="ECK0512" /gene_synonym="JW0507" /gene_synonym="JW0508" /codon_start=1 /transl_table=11 /product="NO-induced DUF1116 protein" /protein_id="ABD18638.2" /db_xref="GI:558094914" /db_xref="ASAP:ABE-0001787" /db_xref="ASAP:ABE-0285028" /db_xref="ASAP:ABE-0285105" /db_xref="UniProtKB/Swiss-Prot:P77129" /db_xref="EcoGene:EG13398" /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLH AGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMG GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEV MDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR AVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ IGAGTVRAPLACFEQALEALAESMGIG" gene 434353..435168 /gene="ylbF" /locus_tag="b0520" /gene_synonym="ECK0513" /gene_synonym="JW0509" /db_xref="EcoGene:EG13626" CDS 434353..435168 /gene="ylbF" /locus_tag="b0520" /gene_synonym="ECK0513" /gene_synonym="JW0509" /function="putative enzyme; Purine nitrogen catabolism" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein" /protein_id="AAC73622.1" /db_xref="GI:1786731" /db_xref="ASAP:ABE-0001789" /db_xref="UniProtKB/Swiss-Prot:P0AAS5" /db_xref="EcoGene:EG13626" /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP AHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLG KGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQ GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP" gene 435165..436058 /gene="ybcF" /locus_tag="b0521" /gene_synonym="arcC" /gene_synonym="ECK0514" /gene_synonym="JW0510" /db_xref="EcoGene:EG12384" CDS 435165..436058 /gene="ybcF" /locus_tag="b0521" /gene_synonym="arcC" /gene_synonym="ECK0514" /gene_synonym="JW0510" /function="putative enzyme; Purine nitrogen catabolism" /note="putative carbamate kinase; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="putative carbonate kinase" /protein_id="AAC73623.1" /db_xref="GI:1786732" /db_xref="ASAP:ABE-0001791" /db_xref="UniProtKB/Swiss-Prot:P37306" /db_xref="EcoGene:EG12384" /translation="MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYR LAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVT TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP RKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGL VILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPNVTAVSGYVRSRGKPAW IGALSRIEETLAGEAGTCISL" repeat_region 436080..436236 /note="REP52 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(436253..437320) /gene="purK" /locus_tag="b0522" /gene_synonym="ECK0515" /gene_synonym="JW0511" /gene_synonym="purE2" /db_xref="EcoGene:EG10796" CDS complement(436253..437320) /gene="purK" /locus_tag="b0522" /gene_synonym="ECK0515" /gene_synonym="JW0511" /gene_synonym="purE2" /EC_number="4.1.1.21" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1534690" /note="phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="N5-carboxyaminoimidazole ribonucleotide synthase" /protein_id="AAC73624.1" /db_xref="GI:1786733" /db_xref="ASAP:ABE-0001794" /db_xref="UniProtKB/Swiss-Prot:P09029" /db_xref="EcoGene:EG10796" /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAE RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG YVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV NNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA LIPLLPPEYASGVIWAQSKFG" gene complement(437317..437826) /gene="purE" /locus_tag="b0523" /gene_synonym="ade" /gene_synonym="ade3" /gene_synonym="ECK0516" /gene_synonym="JW0512" /gene_synonym="Pur2" /db_xref="EcoGene:EG10793" CDS complement(437317..437826) /gene="purE" /locus_tag="b0523" /gene_synonym="ade" /gene_synonym="ade3" /gene_synonym="ECK0516" /gene_synonym="JW0512" /gene_synonym="Pur2" /EC_number="4.1.1.21" /function="enzyme; Purine ribonucleotide biosynthesis" /note="phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="N5-carboxyaminoimidazole ribonucleotide mutase" /protein_id="AAC73625.1" /db_xref="GI:1786734" /db_xref="ASAP:ABE-0001796" /db_xref="UniProtKB/Swiss-Prot:P0AG18" /db_xref="EcoGene:EG10793" /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL ENPDPRGAA" gene complement(437944..438666) /gene="lpxH" /locus_tag="b0524" /gene_synonym="ECK0517" /gene_synonym="JW0513" /gene_synonym="ybbF" /db_xref="EcoGene:EG12666" CDS complement(437944..438666) /gene="lpxH" /locus_tag="b0524" /gene_synonym="ECK0517" /gene_synonym="JW0513" /gene_synonym="ybbF" /EC_number="3.6.1.-" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-2,3-diacylglucosamine pyrophosphohydrolase" /protein_id="AAC73626.1" /db_xref="GI:1786735" /db_xref="ASAP:ABE-0001804" /db_xref="UniProtKB/Swiss-Prot:P43341" /db_xref="EcoGene:EG12666" /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE AWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANS KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA WHTEGSMVKVTADDVELIHFPF" gene complement(438669..439163) /gene="ppiB" /locus_tag="b0525" /gene_synonym="ECK0518" /gene_synonym="JW0514" /db_xref="EcoGene:EG10758" CDS complement(438669..439163) /gene="ppiB" /locus_tag="b0525" /gene_synonym="ECK0518" /gene_synonym="JW0514" /EC_number="5.2.1.8" /function="enzyme; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase B (rotamase B)" /protein_id="AAC73627.1" /db_xref="GI:1786736" /db_xref="ASAP:ABE-0001806" /db_xref="UniProtKB/Swiss-Prot:P23869" /db_xref="EcoGene:EG10758" /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV VDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV TVSE" gene 439337..440722 /gene="cysS" /locus_tag="b0526" /gene_synonym="ECK0519" /gene_synonym="JW0515" /db_xref="EcoGene:EG10196" CDS 439337..440722 /gene="cysS" /locus_tag="b0526" /gene_synonym="ECK0519" /gene_synonym="JW0515" /EC_number="6.1.1.16" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2014166" /note="cysteine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="AAC73628.1" /db_xref="GI:1786737" /db_xref="ASAP:ABE-0001810" /db_xref="UniProtKB/Swiss-Prot:P21888" /db_xref="EcoGene:EG10196" /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDA LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE DGPQGTTWRRK" repeat_region 440733..440758 /note="REP53 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(440758..441279) /gene="ybcI" /locus_tag="b0527" /gene_synonym="ECK0520" /gene_synonym="JW0516" /db_xref="EcoGene:EG12708" CDS complement(440758..441279) /gene="ybcI" /locus_tag="b0527" /gene_synonym="ECK0520" /gene_synonym="JW0516" /codon_start=1 /transl_table=11 /product="DUF457 family inner membrane protein" /protein_id="AAC73629.1" /db_xref="GI:1786738" /db_xref="ASAP:ABE-0001812" /db_xref="UniProtKB/Swiss-Prot:P45570" /db_xref="EcoGene:EG12708" /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSL LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP GMLLMGMLWWRRR" gene complement(441387..441599) /gene="ybcJ" /locus_tag="b0528" /gene_synonym="ECK0521" /gene_synonym="JW5070" /db_xref="EcoGene:EG12879" CDS complement(441387..441599) /gene="ybcJ" /locus_tag="b0528" /gene_synonym="ECK0521" /gene_synonym="JW5070" /codon_start=1 /transl_table=11 /product="ribosome-associated protein; putative RNA-binding protein" /protein_id="AAC73630.2" /db_xref="GI:87081752" /db_xref="ASAP:ABE-0001816" /db_xref="UniProtKB/Swiss-Prot:P0AAS7" /db_xref="EcoGene:EG12879" /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA VETRKRCKIVAGQTVSFAGHSVQVVA" gene complement(441601..442467) /gene="folD" /locus_tag="b0529" /gene_synonym="ads" /gene_synonym="ECK0522" /gene_synonym="JW0518" /db_xref="EcoGene:EG10328" CDS complement(441601..442467) /gene="folD" /locus_tag="b0529" /gene_synonym="ads" /gene_synonym="ECK0522" /gene_synonym="JW0518" /EC_number="1.5.1.5" /EC_number="3.5.4.9" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" /protein_id="AAC73631.1" /db_xref="GI:1786741" /db_xref="ASAP:ABE-0001818" /db_xref="UniProtKB/Swiss-Prot:P24186" /db_xref="EcoGene:EG10328" /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLP AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL QACVEYHDPQDE" gene 442938..443480 /gene="sfmA" /locus_tag="b0530" /gene_synonym="ECK0523" /gene_synonym="fimA" /gene_synonym="JW0519" /db_xref="EcoGene:EG13881" CDS 442938..443480 /gene="sfmA" /locus_tag="b0530" /gene_synonym="ECK0523" /gene_synonym="fimA" /gene_synonym="JW0519" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="FimA homolog, function unknown" /protein_id="AAC73632.2" /db_xref="GI:87081753" /db_xref="ASAP:ABE-0001825" /db_xref="UniProtKB/Swiss-Prot:P0ABW5" /db_xref="EcoGene:EG13881" /translation="MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVN TDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAIND NLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGT GTSASAGQANADATFIMRYE" gene 443700..444392 /gene="sfmC" /locus_tag="b0531" /gene_synonym="ECK0524" /gene_synonym="fimC" /gene_synonym="JW0520" /db_xref="EcoGene:EG13882" CDS 443700..444392 /gene="sfmC" /locus_tag="b0531" /gene_synonym="ECK0524" /gene_synonym="fimC" /gene_synonym="JW0520" /function="putative factor; Surface structures" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilus chaperone" /protein_id="AAC73633.1" /db_xref="GI:1786743" /db_xref="ASAP:ABE-0001828" /db_xref="UniProtKB/Swiss-Prot:P77249" /db_xref="EcoGene:EG13882" /translation="MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTA VWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAAD RESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDY GSVTPVREVNLN" gene 444423..447026 /gene="sfmD" /locus_tag="b0532" /gene_synonym="ECK0525" /gene_synonym="fimD" /gene_synonym="JW0521" /db_xref="EcoGene:EG13883" CDS 444423..447026 /gene="sfmD" /locus_tag="b0532" /gene_synonym="ECK0525" /gene_synonym="fimD" /gene_synonym="JW0521" /function="membrane; Outer membrane constituents" /note="putative outer membrane protein, export function; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane export usher protein" /protein_id="AAC73634.1" /db_xref="GI:1786744" /db_xref="ASAP:ABE-0001830" /db_xref="UniProtKB/Swiss-Prot:P77468" /db_xref="EcoGene:EG13883" /translation="MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFL LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMP CFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIAL LSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSW NYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDN MYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDV TIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGL PQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADASRHEGDSIRFL YAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDGEHRDEPIIVNYHNL RFSRKDRLQLNVSQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSF SWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLA GVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGGGYNYDRDQHDVNWQL SGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMLYATVYRY NRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGS LVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVT VISAVCTHPGS" gene 447062..448045 /gene="sfmH" /locus_tag="b0533" /gene_synonym="ECK0526" /gene_synonym="fimH" /gene_synonym="JW5071" /db_xref="EcoGene:EG13884" CDS 447062..448045 /gene="sfmH" /locus_tag="b0533" /gene_synonym="ECK0526" /gene_synonym="fimH" /gene_synonym="JW5071" /function="putative structural component; Surface structures" /note="involved in fimbrial asembly; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="FimA homolog, function unknown" /protein_id="AAC73635.2" /db_xref="GI:145693100" /db_xref="ASAP:ABE-0001832" /db_xref="UniProtKB/Swiss-Prot:P75715" /db_xref="EcoGene:EG13884" /translation="MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQ IVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSL VDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMF TVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGN RPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPI TPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ" gene 448056..448571 /gene="sfmF" /locus_tag="b0534" /gene_synonym="ECK0527" /gene_synonym="fimF" /gene_synonym="JW5072" /gene_synonym="ybcG" /db_xref="EcoGene:EG12388" CDS 448056..448571 /gene="sfmF" /locus_tag="b0534" /gene_synonym="ECK0527" /gene_synonym="fimF" /gene_synonym="JW5072" /gene_synonym="ybcG" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="FimA homolog, function unknown" /protein_id="AAC73636.1" /db_xref="GI:1786746" /db_xref="ASAP:ABE-0001834" /db_xref="UniProtKB/Swiss-Prot:P38052" /db_xref="EcoGene:EG12388" /translation="MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNT ADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLAL DDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA KADAIFMINYN" gene complement(448574..449206) /gene="sfmZ" /locus_tag="b0535" /gene_synonym="ECK0528" /gene_synonym="fimZ" /gene_synonym="JW5073" /gene_synonym="ybcA" /db_xref="EcoGene:EG11103" CDS complement(448574..449206) /gene="sfmZ" /locus_tag="b0535" /gene_synonym="ECK0528" /gene_synonym="fimZ" /gene_synonym="JW5073" /gene_synonym="ybcA" /function="putative regulator; Surface structures" /note="fimbrial Z protein; probable signal transducer; GO_component: GO:0009289 - pilus; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator family protein" /protein_id="AAC73637.1" /db_xref="GI:1786747" /db_xref="ASAP:ABE-0001836" /db_xref="UniProtKB/Swiss-Prot:P0AEL8" /db_xref="EcoGene:EG11103" /translation="MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANG FVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRY LVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI" gene 449449..449525 /gene="argU" /locus_tag="b0536" /gene_synonym="dnaY" /gene_synonym="ECK0529" /gene_synonym="fimU" /gene_synonym="JWR0010" /gene_synonym="pin" /db_xref="EcoGene:EG30014" tRNA 449449..449525 /gene="argU" /locus_tag="b0536" /gene_synonym="dnaY" /gene_synonym="ECK0529" /gene_synonym="fimU" /gene_synonym="JWR0010" /gene_synonym="pin" /product="tRNA-Arg" /note="anticodon: UCU" /db_xref="ASAP:ABE-0001840" /db_xref="EcoGene:EG30014" misc_feature 449528..470829 /note="cryptic prophage DLP12" gene complement(449541..450704) /gene="intD" /locus_tag="b0537" /gene_synonym="ECK0530" /gene_synonym="int" /gene_synonym="JW0525" /db_xref="EcoGene:EG10507" CDS complement(449541..450704) /gene="intD" /locus_tag="b0537" /gene_synonym="ECK0530" /gene_synonym="int" /gene_synonym="JW0525" /function="IS, phage, Tn; Phage or Prophage Related" /note="prophage DLP12 integrase" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative phage integrase" /protein_id="AAC73638.1" /db_xref="GI:1786748" /db_xref="ASAP:ABE-0001842" /db_xref="UniProtKB/Swiss-Prot:P24218" /db_xref="EcoGene:EG10507" /translation="MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAE LWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAK IYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAA ERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSN IINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKA AKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVL QEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA" gene complement(450584..450805) /gene="xisD" /locus_tag="b4633" /gene_synonym="ECK4435" /gene_synonym="ybcB" /pseudo /db_xref="EcoGene:EG12348" CDS complement(450584..450805) /gene="xisD" /locus_tag="b4633" /gene_synonym="ECK4435" /gene_synonym="ybcB" /note="pseudogene, exisionase in defective prophage DLP12;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG12348" gene complement(450824..451102) /gene="exoD" /locus_tag="b0539" /gene_synonym="ECK0531" /gene_synonym="JW0526" /gene_synonym="ybcC" /pseudo /db_xref="EcoGene:EG12349" CDS complement(450824..451102) /gene="exoD" /locus_tag="b0539" /gene_synonym="ECK0531" /gene_synonym="JW0526" /gene_synonym="ybcC" /note="pseudogene, DLP12 prophage; phage-type exonuclease family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001850" /db_xref="UniProtKB/Swiss-Prot:P75717" /db_xref="EcoGene:EG12349" gene 451102..451413 /gene="peaD" /locus_tag="b4508" /gene_synonym="ECK0532" /gene_synonym="JW0527" /gene_synonym="ybcD" /pseudo /db_xref="EcoGene:EG12350" CDS 451102..451413 /gene="peaD" /locus_tag="b4508" /gene_synonym="ECK0532" /gene_synonym="JW0527" /gene_synonym="ybcD" /note="pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related; GO_component: GO:0005737 - cytoplasm" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285029" /db_xref="UniProtKB/Swiss-Prot:P77528" /db_xref="EcoGene:EG12350" gene join(451410..451502,452761..452973) /gene="renD" /locus_tag="b0542" /gene_synonym="ECK0533" /gene_synonym="JW0530" /gene_synonym="ybcE" /pseudo /db_xref="EcoGene:EG12351" CDS join(451410..451502,452761..452973) /gene="renD" /locus_tag="b0542" /gene_synonym="ECK0533" /gene_synonym="JW0530" /gene_synonym="ybcE" /note="pseudogene, DLP12 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001860" /db_xref="UniProtKB/Swiss-Prot:P75718" /db_xref="EcoGene:EG12351" mobile_element 451503..452760 /mobile_element_type="insertion sequence:IS3C" gene 451568..451867 /gene="insE1" /locus_tag="b0540" /gene_synonym="ECK0298" /db_xref="EcoGene:EG40005" CDS 451568..451867 /gene="insE1" /locus_tag="b0540" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="AAC73641.2" /db_xref="GI:226510930" /db_xref="ASAP:ABE-0001855" /db_xref="UniProtKB/Swiss-Prot:P0CF68" /db_xref="EcoGene:EG40005" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 451864..452730 /gene="insF1" /locus_tag="b0541" /gene_synonym="ECK0299" /db_xref="EcoGene:EG40006" CDS 451864..452730 /gene="insF1" /locus_tag="b0541" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="AAC73642.1" /db_xref="GI:1786753" /db_xref="ASAP:ABE-0001857" /db_xref="UniProtKB/Swiss-Prot:P0CF81" /db_xref="EcoGene:EG40006" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene 453041..453373 /gene="emrE" /locus_tag="b0543" /gene_synonym="eb" /gene_synonym="ECK0534" /gene_synonym="JW0531" /gene_synonym="mvrC" /db_xref="EcoGene:EG10629" CDS 453041..453373 /gene="emrE" /locus_tag="b0543" /gene_synonym="eb" /gene_synonym="ECK0534" /gene_synonym="JW0531" /gene_synonym="mvrC" /function="transport; Drug/analog sensitivity; Phage or Prophage Related" /note="methylviologen resistance; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="DLP12 prophage; multidrug resistance protein" /protein_id="AAC73644.1" /db_xref="GI:1786755" /db_xref="ASAP:ABE-0001863" /db_xref="UniProtKB/Swiss-Prot:P23895" /db_xref="EcoGene:EG10629" /translation="MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASF WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIIN LLSRSTPH" gene 453628..455154 /gene="ybcK" /locus_tag="b0544" /gene_synonym="ECK0535" /gene_synonym="JW0532" /db_xref="EcoGene:EG13627" CDS 453628..455154 /gene="ybcK" /locus_tag="b0544" /gene_synonym="ECK0535" /gene_synonym="JW0532" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative recombinase" /protein_id="AAC73645.1" /db_xref="GI:1786756" /db_xref="ASAP:ABE-0001866" /db_xref="UniProtKB/Swiss-Prot:P77698" /db_xref="EcoGene:EG13627" /translation="MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLK LILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKR QDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN DHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDL FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC RTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF " gene 455619..456170 /gene="ybcL" /locus_tag="b0545" /gene_synonym="ECK0536" /gene_synonym="JW0533" /db_xref="EcoGene:EG13628" CDS 455619..456170 /gene="ybcL" /locus_tag="b0545" /gene_synonym="ECK0536" /gene_synonym="JW0533" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein" /protein_id="AAC73646.1" /db_xref="GI:1786757" /db_xref="ASAP:ABE-0001869" /db_xref="UniProtKB/Swiss-Prot:P77368" /db_xref="EcoGene:EG13628" /translation="MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGF GCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAG RRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGA LVGYMLNANKIATAEITPVYEIK" gene 456180..456977 /gene="ybcM" /locus_tag="b0546" /gene_synonym="ECK0537" /gene_synonym="JW0534" /db_xref="EcoGene:EG13629" CDS 456180..456977 /gene="ybcM" /locus_tag="b0546" /gene_synonym="ECK0537" /gene_synonym="JW0534" /function="Phage or Prophage Related" /note="putative ARAC-type regulatory protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative DNA-binding transcriptional regulator" /protein_id="AAC73647.1" /db_xref="GI:1786758" /db_xref="ASAP:ABE-0001871" /db_xref="UniProtKB/Swiss-Prot:P77634" /db_xref="EcoGene:EG13629" /translation="MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINW ETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIR NKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSK QSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNA LSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE" gene 457094..457195 /gene="ylcH" /locus_tag="b4588" /gene_synonym="ECK4398" /db_xref="EcoGene:EG14355" CDS 457094..457195 /gene="ylcH" /locus_tag="b4588" /gene_synonym="ECK4398" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="uncharacterized protein, DLP12 prophage" /protein_id="ABP93435.1" /db_xref="GI:145693101" /db_xref="UniProtKB/Swiss-Prot:Q47268" /db_xref="EcoGene:EG14355" /translation="MRTYNPNSLLPSQMQKCTCNSLHLAFDLCGGEA" gene 457192..457647 /gene="ybcN" /locus_tag="b0547" /gene_synonym="ECK0538" /gene_synonym="JW0535" /db_xref="EcoGene:EG13630" CDS 457192..457647 /gene="ybcN" /locus_tag="b0547" /gene_synonym="ECK0538" /gene_synonym="JW0535" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; uncharacterized protein" /protein_id="AAC73648.1" /db_xref="GI:1786759" /db_xref="ASAP:ABE-0001874" /db_xref="UniProtKB/Swiss-Prot:Q47269" /db_xref="EcoGene:EG13630" /translation="MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRS LSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTI QSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA" gene 457647..457817 /gene="ninE" /locus_tag="b0548" /gene_synonym="ECK0539" /gene_synonym="JW0536" /db_xref="EcoGene:EG14286" CDS 457647..457817 /gene="ninE" /locus_tag="b0548" /gene_synonym="ECK0539" /gene_synonym="JW0536" /function="Phage or Prophage Related" /note="similar to phage 82 and lambda proteins" /codon_start=1 /transl_table=11 /product="DLP12 prophage; conserved protein" /protein_id="AAC73649.1" /db_xref="GI:1786760" /db_xref="ASAP:ABE-0001876" /db_xref="UniProtKB/Swiss-Prot:Q47270" /db_xref="EcoGene:EG14286" /translation="MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDK KWLRLAARRSHG" gene 457810..458100 /gene="ybcO" /locus_tag="b0549" /gene_synonym="ECK0540" /gene_synonym="JW0537" /db_xref="EcoGene:EG13631" CDS 457810..458100 /gene="ybcO" /locus_tag="b0549" /gene_synonym="ECK0540" /gene_synonym="JW0537" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; uncharacterized protein" /protein_id="AAC73650.1" /db_xref="GI:1786761" /db_xref="ASAP:ABE-0001878" /db_xref="UniProtKB/Swiss-Prot:P68661" /db_xref="EcoGene:EG13631" /translation="MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTK PPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA" gene 458097..458459 /gene="rusA" /locus_tag="b0550" /gene_synonym="ECK0541" /gene_synonym="JW0538" /gene_synonym="rus" /gene_synonym="ybcP" /db_xref="EcoGene:EG20283" CDS 458097..458459 /gene="rusA" /locus_tag="b0550" /gene_synonym="ECK0541" /gene_synonym="JW0538" /gene_synonym="rus" /gene_synonym="ybcP" /EC_number="3.1.22.-" /function="enzyme; Degradation of DNA; Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 7813450" /note="endodeoxyribonuclease RUS (Holliday junction resolvase); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="DLP12 prophage; endonuclease RUS" /protein_id="AAC73651.1" /db_xref="GI:1786762" /db_xref="ASAP:ABE-0001880" /db_xref="UniProtKB/Swiss-Prot:P0AG74" /db_xref="EcoGene:EG20283" /translation="MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKN AMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKM PVTKGGRLELTITEMGNE" gene 458456..458596 /gene="ylcG" /locus_tag="b4509" /gene_synonym="ECK0542" /gene_synonym="JW5076" /db_xref="EcoGene:EG14354" CDS 458456..458596 /gene="ylcG" /locus_tag="b4509" /gene_synonym="ECK0542" /gene_synonym="JW5076" /function="Phage or Prophage Related" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein, DLP12 prophage" /protein_id="ABD18639.1" /db_xref="GI:87081756" /db_xref="ASAP:ABE-0285030" /db_xref="UniProtKB/Swiss-Prot:Q47272" /db_xref="EcoGene:EG14354" /translation="MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGA GV" gene 458682..459065 /gene="quuD" /locus_tag="b0551" /gene_synonym="ECK0543" /gene_synonym="JW0539" /gene_synonym="ybcQ" /db_xref="EcoGene:EG13633" CDS 458682..459065 /gene="quuD" /locus_tag="b0551" /gene_synonym="ECK0543" /gene_synonym="JW0539" /gene_synonym="ybcQ" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative antitermination protein" /protein_id="AAC73652.1" /db_xref="GI:1786763" /db_xref="ASAP:ABE-0001883" /db_xref="UniProtKB/Swiss-Prot:Q47274" /db_xref="EcoGene:EG13633" /translation="MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQ CCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKA EGIIEGMLMALDIRLEMDIVVNNSN" gene complement(join(459255..459312,460512..461551)) /gene="nmpC" /locus_tag="b0553" /gene_synonym="ECK0544" /gene_synonym="JW5078" /gene_synonym="phmA" /pseudo /db_xref="EcoGene:EG10659" CDS complement(join(459255..459312,460512..461551)) /gene="nmpC" /locus_tag="b0553" /gene_synonym="ECK0544" /gene_synonym="JW5078" /gene_synonym="phmA" /note="DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001888" /db_xref="UniProtKB/Swiss-Prot:P21420" /db_xref="EcoGene:EG10659" mobile_element complement(459317..460511) /mobile_element_type="insertion sequence:IS5B" gene complement(459463..460479) /gene="insH1" /locus_tag="b0552" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(459463..460479) /gene="insH1" /locus_tag="b0552" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC73653.1" /db_xref="GI:1786764" /db_xref="ASAP:ABE-0001886" /db_xref="UniProtKB/Swiss-Prot:P0CE50" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 462124..462339 /gene="essD" /locus_tag="b0554" /gene_synonym="ECK0545" /gene_synonym="JW0543" /gene_synonym="ybcR" /db_xref="EcoGene:EG13634" CDS 462124..462339 /gene="essD" /locus_tag="b0554" /gene_synonym="ECK0545" /gene_synonym="JW0543" /gene_synonym="ybcR" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative phage lysis protein" /protein_id="AAC73655.1" /db_xref="GI:1786767" /db_xref="ASAP:ABE-0001895" /db_xref="UniProtKB/Swiss-Prot:P0A9R2" /db_xref="EcoGene:EG13634" /translation="MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGS LVFGLLTYLTNLYFKIKEDKRKAARGE" gene 462339..462836 /gene="rrrD" /locus_tag="b0555" /gene_synonym="arrD" /gene_synonym="ECK0546" /gene_synonym="JW0544" /gene_synonym="ybcS" /db_xref="EcoGene:EG13635" CDS 462339..462836 /gene="rrrD" /locus_tag="b0555" /gene_synonym="arrD" /gene_synonym="ECK0546" /gene_synonym="JW0544" /gene_synonym="ybcS" /function="Phage or Prophage Related" /note="bacteriophage lambda lysozyme homolog" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative lysozyme" /protein_id="AAC73656.1" /db_xref="GI:1786768" /db_xref="ASAP:ABE-0001898" /db_xref="UniProtKB/Swiss-Prot:P78285" /db_xref="EcoGene:EG13635" /translation="MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKD IVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGAL YSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVC LWGQQ" gene 462833..463294 /gene="rzpD" /locus_tag="b0556" /gene_synonym="ECK0547" /gene_synonym="JW5079" /gene_synonym="Rz" /gene_synonym="ybcT" /db_xref="EcoGene:EG13636" CDS 462833..463294 /gene="rzpD" /locus_tag="b0556" /gene_synonym="ECK0547" /gene_synonym="JW5079" /gene_synonym="Rz" /gene_synonym="ybcT" /function="Phage or Prophage Related" /note="bacteriophage lambda endopeptidase homolog; completely contained in another CDS" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative murein endopeptidase" /protein_id="AAC73657.1" /db_xref="GI:1786769" /db_xref="ASAP:ABE-0001900" /db_xref="UniProtKB/Swiss-Prot:P75719" /db_xref="EcoGene:EG13636" /translation="MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNAREL KLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSV REATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR" gene 463053..463235 /gene="rzoD" /locus_tag="b4510" /gene_synonym="ECK0548" /gene_synonym="JW5080" /gene_synonym="Rz1" /db_xref="EcoGene:EG14380" CDS 463053..463235 /gene="rzoD" /locus_tag="b4510" /gene_synonym="ECK0548" /gene_synonym="JW5080" /gene_synonym="Rz1" /function="Phage or Prophage Related" /note="completely contained in another CDS; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative lipoprotein" /protein_id="ABD18640.1" /db_xref="GI:87081757" /db_xref="ASAP:ABE-0285031" /db_xref="UniProtKB/Swiss-Prot:P58041" /db_xref="EcoGene:EG14380" /translation="MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPP DWQTPLNGIISPSERG" gene complement(463326..463619) /gene="borD" /locus_tag="b0557" /gene_synonym="ECK0549" /gene_synonym="iss" /gene_synonym="JW0546" /gene_synonym="ybcU" /db_xref="EcoGene:EG13637" CDS complement(463326..463619) /gene="borD" /locus_tag="b0557" /gene_synonym="ECK0549" /gene_synonym="iss" /gene_synonym="JW0546" /gene_synonym="ybcU" /function="Phage or Prophage Related" /note="bacteriophage lambda Bor protein homolog" /codon_start=1 /transl_table=11 /product="DLP12 prophage; putative lipoprotein" /protein_id="AAC73658.1" /db_xref="GI:1786770" /db_xref="ASAP:ABE-0001902" /db_xref="UniProtKB/Swiss-Prot:P77330" /db_xref="EcoGene:EG13637" /translation="MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVS GIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK" gene complement(463910..464320) /gene="ybcV" /locus_tag="b0558" /gene_synonym="ECK0550" /gene_synonym="JW5081" /db_xref="EcoGene:EG13638" CDS complement(463910..464320) /gene="ybcV" /locus_tag="b0558" /gene_synonym="ECK0550" /gene_synonym="JW5081" /function="Phage or Prophage Related" /note="putative an envelop protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; uncharacterized protein" /protein_id="AAC73659.2" /db_xref="GI:87081758" /db_xref="ASAP:ABE-0001907" /db_xref="UniProtKB/Swiss-Prot:P77598" /db_xref="EcoGene:EG13638" /translation="MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNI HIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFR WITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR" gene 464606..464812 /gene="ybcW" /locus_tag="b0559" /gene_synonym="ECK0551" /gene_synonym="JW0548" /db_xref="EcoGene:EG13639" CDS 464606..464812 /gene="ybcW" /locus_tag="b0559" /gene_synonym="ECK0551" /gene_synonym="JW0548" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DLP12 prophage; uncharacterized protein" /protein_id="AAC73660.1" /db_xref="GI:1786772" /db_xref="ASAP:ABE-0001912" /db_xref="UniProtKB/Swiss-Prot:P64435" /db_xref="EcoGene:EG13639" /translation="MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLE AFRAIEAALVKHDNNMKDYSLVVD" gene complement(464977..465171) /gene="ylcI" /locus_tag="b4589" /gene_synonym="ECK4399" /db_xref="EcoGene:EG14444" CDS complement(464977..465171) /gene="ylcI" /locus_tag="b4589" /gene_synonym="ECK4399" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DUF3950 family protein, DLP12 prophage" /protein_id="ABP93436.1" /db_xref="GI:145693102" /db_xref="UniProtKB/Swiss-Prot:A5A607" /db_xref="EcoGene:EG14444" /translation="MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEA CRRRLTSEKRAYTSIKSDEE" gene 465560..466105 /gene="nohD" /locus_tag="b0560" /gene_synonym="ECK0552" /gene_synonym="JW0549" /gene_synonym="nohB" /db_xref="EcoGene:EG11635" CDS 465560..466105 /gene="nohD" /locus_tag="b0560" /gene_synonym="ECK0552" /gene_synonym="JW0549" /gene_synonym="nohB" /function="Phage or Prophage Related" /note="bacteriophage DNA packaging protein" /codon_start=1 /transl_table=11 /product="DLP12 prophage; DNA packaging protein" /protein_id="AAC73661.1" /db_xref="GI:1786773" /db_xref="ASAP:ABE-0001915" /db_xref="UniProtKB/Swiss-Prot:P31062" /db_xref="EcoGene:EG11635" /translation="MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA AVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNA RDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN KAAALDELIPGLLSEYIEQSG" gene 466080..466388 /gene="aaaD" /locus_tag="b4634" /gene_synonym="ECK4439" /gene_synonym="ylcF" /pseudo /db_xref="EcoGene:EG14346" CDS 466080..466388 /gene="aaaD" /locus_tag="b4634" /gene_synonym="ECK4439" /gene_synonym="ylcF" /note="pseudogene; DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14346" gene 466386..466823 /gene="tfaD" /locus_tag="b0561" /gene_synonym="ECK0553" /gene_synonym="JW5815" /gene_synonym="ybcX" /pseudo /db_xref="EcoGene:EG13640" CDS 466386..466823 /gene="tfaD" /locus_tag="b0561" /gene_synonym="ECK0553" /gene_synonym="JW5815" /gene_synonym="ybcX" /note="pseudogene, DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001917" /db_xref="UniProtKB/Swiss-Prot:P77699" /db_xref="EcoGene:EG13640" gene complement(466878..467532) /gene="ybcY" /locus_tag="b0562" /gene_synonym="ECK0554" /gene_synonym="JW0551" /pseudo /db_xref="EcoGene:EG13641" CDS complement(join(466878..467530,467529..467532)) /gene="ybcY" /locus_tag="b0562" /gene_synonym="ECK0554" /gene_synonym="JW0551" /note="pseudogene, DLP12 prophage; methyltransferase homology;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001919" /db_xref="UniProtKB/Swiss-Prot:P77460" /db_xref="EcoGene:EG13641" gene 467679..467861 /gene="tfaX" /locus_tag="b0563" /gene_synonym="ECK0555" /gene_synonym="JW0552" /gene_synonym="ylcE" /pseudo /db_xref="EcoGene:EG14317" CDS 467679..467861 /gene="tfaX" /locus_tag="b0563" /gene_synonym="ECK0555" /gene_synonym="JW0552" /gene_synonym="ylcE" /note="pseudogene, DLP12 prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0001926" /db_xref="UniProtKB/Swiss-Prot:P77087" /db_xref="EcoGene:EG14317" gene 468407..469156 /gene="appY" /locus_tag="b0564" /gene_synonym="ECK0556" /gene_synonym="JW0553" /db_xref="EcoGene:EG10050" CDS 468407..469156 /gene="appY" /locus_tag="b0564" /gene_synonym="ECK0556" /gene_synonym="JW0553" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions; Phage or Prophage Related" /note="regulatory protein affecting appA and other genes; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="global transcriptional activator; DLP12 prophage" /protein_id="AAC73665.1" /db_xref="GI:1786776" /db_xref="ASAP:ABE-0001929" /db_xref="UniProtKB/Swiss-Prot:P05052" /db_xref="EcoGene:EG10050" /translation="MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVC PSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIAD SHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAE LIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYF ICAFKDYYGVTPSHYFEKIIGVTDGINKTID" gene complement(469406..470359) /gene="ompT" /locus_tag="b0565" /gene_synonym="ECK0557" /gene_synonym="JW0554" /db_xref="EcoGene:EG10673" CDS complement(469406..470359) /gene="ompT" /locus_tag="b0565" /gene_synonym="ECK0557" /gene_synonym="JW0554" /EC_number="3.4.23.49" /function="enzyme; Outer membrane constituents; Phage or Prophage Related" /note="outer membrane protein 3b (a), protease VII; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="DLP12 prophage; outer membrane protease VII; outer membrane protein 3b" /protein_id="AAC73666.1" /db_xref="GI:1786777" /db_xref="ASAP:ABE-0001931" /db_xref="UniProtKB/Swiss-Prot:P09169" /db_xref="EcoGene:EG10673" /translation="MRAKLLGIVLTTPIAISSFASTETLSFTPDNINADISLGTLSGK TKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMV DQDWMDSSNPGTWTDESRHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYS FTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYEDFELGGTF KYSGWVESSDNDEHYDPGKRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRV TNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF" gene 470783..470827 /gene="pauD" /locus_tag="b4635" /gene_synonym="ECK4463" /pseudo /db_xref="EcoGene:EG31172" tRNA 470783..470827 /gene="pauD" /locus_tag="b4635" /gene_synonym="ECK4463" /product="tRNA-OTHER" /pseudo /db_xref="EcoGene:EG31172" gene complement(470873..471634) /gene="envY" /locus_tag="b0566" /gene_synonym="ECK0558" /gene_synonym="JW0555" /db_xref="EcoGene:EG10268" CDS complement(470873..471634) /gene="envY" /locus_tag="b0566" /gene_synonym="ECK0558" /gene_synonym="JW0555" /function="structural component; Outer membrane constituents" /note="envelope protein; thermoregulation of porin biosynthesis; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="porin thermoregulatory transcriptional activator" /protein_id="AAC73667.1" /db_xref="GI:1786778" /db_xref="ASAP:ABE-0001935" /db_xref="UniProtKB/Swiss-Prot:P10805" /db_xref="EcoGene:EG10268" /translation="MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNV IELSTLNHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAA NHSKQQPSRPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQ LCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW" gene complement(471817..472707) /gene="ybcH" /locus_tag="b0567" /gene_synonym="ECK0559" /gene_synonym="JW0556" /db_xref="EcoGene:EG12448" CDS complement(471817..472707) /gene="ybcH" /locus_tag="b0567" /gene_synonym="ECK0559" /gene_synonym="JW0556" /codon_start=1 /transl_table=11 /product="PRK09936 family protein" /protein_id="AAC73668.1" /db_xref="GI:1786779" /db_xref="ASAP:ABE-0001937" /db_xref="UniProtKB/Swiss-Prot:P37325" /db_xref="EcoGene:EG12448" /translation="MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLM SQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMH QKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKL TAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCG KDTLYFSLRYLPVAHGILEY" gene complement(472708..475680) /gene="nfrA" /locus_tag="b0568" /gene_synonym="ECK0560" /gene_synonym="JW0557" /db_xref="EcoGene:EG11740" CDS complement(472708..475680) /gene="nfrA" /locus_tag="b0568" /gene_synonym="ECK0560" /gene_synonym="JW0557" /function="membrane; Phage-related functions and prophages" /note="bacteriophage N4 receptor, outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="bacteriophage N4 receptor, outer membrane subunit" /protein_id="AAC73669.1" /db_xref="GI:1786780" /db_xref="ASAP:ABE-0001939" /db_xref="UniProtKB/Swiss-Prot:P31600" /db_xref="EcoGene:EG11740" /translation="MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRH FVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARL LLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNA LRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLS AAERRQWFDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLIEN KPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDA AQKLLATLPANEMLEERYAVSVATRNKAEALRLARLLYQQEPANLTRLDQLTWQLMQN EQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQ RQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQR QPSAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDR WLQQAEKRGLGSNALYWWLHAQRYIPGQPELALNDLTRSINIAPSANAYVARATIYRQ RHNVPAAVSDLRAALELEPNNSNTQAALGYALWDSGDIAQSREMLEPAHKGLPDDPAL IRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRR WTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVY SRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFIAVEQQLPLNGQNGASDTMLRA SASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQT IEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQHTFKAI NQRNGERNNAFLTIGVHW" gene complement(475667..477904) /gene="nfrB" /locus_tag="b0569" /gene_synonym="ECK0561" /gene_synonym="JW0558" /db_xref="EcoGene:EG11739" CDS complement(475667..477904) /gene="nfrB" /locus_tag="b0569" /gene_synonym="ECK0561" /gene_synonym="JW0558" /function="membrane; Phage-related functions and prophages" /note="bacteriophage N4 receptor, subunit, inner membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="bacteriophage N4 receptor, inner membrane subunit" /protein_id="AAC73670.1" /db_xref="GI:1786781" /db_xref="ASAP:ABE-0001942" /db_xref="UniProtKB/Swiss-Prot:P0AFA5" /db_xref="EcoGene:EG11739" /translation="MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRR IKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHI FVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANF AFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSEL HGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKE KGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGI VFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWH FLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFM ANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTA LRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVA LHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYA RRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLL LRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLES ENEGE" gene complement(478054..479496) /gene="cusS" /locus_tag="b0570" /gene_synonym="ECK0562" /gene_synonym="JW5082" /gene_synonym="silS" /gene_synonym="ybcZ" /db_xref="EcoGene:EG13642" CDS complement(478054..479496) /gene="cusS" /locus_tag="b0570" /gene_synonym="ECK0562" /gene_synonym="JW5082" /gene_synonym="silS" /gene_synonym="ybcZ" /function="putative regulator; Not classified" /note="GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="copper-sensing histidine kinase in two-component regulatory system with CusR" /protein_id="AAC73671.1" /db_xref="GI:1786783" /db_xref="ASAP:ABE-0001946" /db_xref="UniProtKB/Swiss-Prot:P77485" /db_xref="EcoGene:EG13642" /translation="MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFA EQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSQGKTVYHSP GAPDIREFTRDAIPDKDAQGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVD GKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSR QIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTP ITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK MLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTP TGETIVVRCQTVDHLVQVIVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA IVKSIVVAHKGTVAVTSDARGTRFVITLPA" gene complement(479486..480169) /gene="cusR" /locus_tag="b0571" /gene_synonym="ECK0563" /gene_synonym="JW0560" /gene_synonym="silR" /gene_synonym="ylcA" /db_xref="EcoGene:EG13851" CDS complement(479486..480169) /gene="cusR" /locus_tag="b0571" /gene_synonym="ECK0563" /gene_synonym="JW0560" /gene_synonym="silR" /gene_synonym="ylcA" /function="putative regulator; Not classified" /note="GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with CusS" /protein_id="AAC73672.1" /db_xref="GI:1786784" /db_xref="ASAP:ABE-0001948" /db_xref="UniProtKB/Swiss-Prot:P0ACZ8" /db_xref="EcoGene:EG13851" /translation="MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKP FAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVG YMLEVPDGQ" gene 480326..481699 /gene="cusC" /locus_tag="b0572" /gene_synonym="ECK0564" /gene_synonym="ibeB" /gene_synonym="JW0561" /gene_synonym="silC" /gene_synonym="ylcB" /db_xref="EcoGene:EG14233" CDS 480326..481699 /gene="cusC" /locus_tag="b0572" /gene_synonym="ECK0564" /gene_synonym="ibeB" /gene_synonym="JW0561" /gene_synonym="silC" /gene_synonym="ylcB" /function="putative transport; Drug/analog sensitivity" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, outer membrane component" /protein_id="AAC73673.1" /db_xref="GI:1786785" /db_xref="ASAP:ABE-0001958" /db_xref="UniProtKB/Swiss-Prot:P77211" /db_xref="EcoGene:EG14233" /translation="MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVN AADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQL NGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQI LLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNF IPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQIS AQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISL YTALGGG" gene 481857..482189 /gene="cusF" /locus_tag="b0573" /gene_synonym="cusX" /gene_synonym="ECK0565" /gene_synonym="JW0562" /gene_synonym="silF" /gene_synonym="ylcC" /db_xref="EcoGene:EG14234" CDS 481857..482189 /gene="cusF" /locus_tag="b0573" /gene_synonym="cusX" /gene_synonym="ECK0565" /gene_synonym="JW0562" /gene_synonym="silF" /gene_synonym="ylcC" /codon_start=1 /transl_table=11 /product="periplasmic copper- and silver-binding protein" /protein_id="AAC73674.1" /db_xref="GI:1786786" /db_xref="ASAP:ABE-0001967" /db_xref="UniProtKB/Swiss-Prot:P77214" /db_xref="EcoGene:EG14234" /translation="MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVV KGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSL LQDIKVSQ" gene 482205..483428 /gene="cusB" /locus_tag="b0574" /gene_synonym="ECK0566" /gene_synonym="JW0563" /gene_synonym="silB" /gene_synonym="ylcD" /db_xref="EcoGene:EG14235" CDS 482205..483428 /gene="cusB" /locus_tag="b0574" /gene_synonym="ECK0566" /gene_synonym="JW0563" /gene_synonym="silB" /gene_synonym="ylcD" /function="putative transport; Drug/analog sensitivity" /note="GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, membrane fusion protein" /protein_id="AAC73675.1" /db_xref="GI:1786787" /db_xref="ASAP:ABE-0001969" /db_xref="UniProtKB/Swiss-Prot:P77239" /db_xref="EcoGene:EG14235" /translation="MKKIALIIGSMIAGGIISAAGFTWVAKAEPPAEKTSTAERKILF WYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRG PLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVE AQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVI TAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTL TIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALID TGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS GALERMRSESATHAH" gene 483440..486583 /gene="cusA" /locus_tag="b0575" /gene_synonym="ECK0567" /gene_synonym="JW0564" /gene_synonym="silA" /gene_synonym="ybdE" /db_xref="EcoGene:EG12367" CDS 483440..486583 /gene="cusA" /locus_tag="b0575" /gene_synonym="ECK0567" /gene_synonym="JW0564" /gene_synonym="silA" /gene_synonym="ybdE" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="copper/silver efflux system, membrane component" /protein_id="AAC73676.1" /db_xref="GI:1786788" /db_xref="ASAP:ABE-0001971" /db_xref="UniProtKB/Swiss-Prot:P38054" /db_xref="EcoGene:EG12367" /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIA ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMS LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN EGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMV ETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL ADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSV AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL LWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEA LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI IPAAYKLMWLHRHRVRK" gene 486685..488061 /gene="pheP" /locus_tag="b0576" /gene_synonym="ECK0568" /gene_synonym="JW0565" /db_xref="EcoGene:EG10708" CDS 486685..488061 /gene="pheP" /locus_tag="b0576" /gene_synonym="ECK0568" /gene_synonym="JW0565" /function="transport; Transport of small molecules: Amino acids, amines" /note="phenylalanine-specific transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009094 - L-phenylalanine biosynthetic process; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="phenylalanine transporter" /protein_id="AAC73677.1" /db_xref="GI:1786789" /db_xref="ASAP:ABE-0001976" /db_xref="UniProtKB/Swiss-Prot:P24207" /db_xref="EcoGene:EG10708" /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFM AFKTLRRK" gene complement(488142..489389) /gene="ybdG" /locus_tag="b0577" /gene_synonym="ECK0569" /gene_synonym="JW0566" /gene_synonym="mscM" /db_xref="EcoGene:EG12620" CDS complement(488142..489389) /gene="ybdG" /locus_tag="b0577" /gene_synonym="ECK0569" /gene_synonym="JW0566" /gene_synonym="mscM" /function="transport; Transport of small molecules: Other" /note="putative transport; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, miniconductance" /protein_id="AAC73678.1" /db_xref="GI:1786791" /db_xref="ASAP:ABE-0001978" /db_xref="UniProtKB/Swiss-Prot:P0AAT4" /db_xref="EcoGene:EG12620" /translation="MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEY LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE FGLRLHQSPTGNDIRSLAGAFKQ" gene complement(489497..490150) /gene="nfsB" /locus_tag="b0578" /gene_synonym="dprA" /gene_synonym="ECK0570" /gene_synonym="JW0567" /gene_synonym="nfnB" /gene_synonym="nfsI" /gene_synonym="ntr" /db_xref="EcoGene:EG20151" CDS complement(489497..490150) /gene="nfsB" /locus_tag="b0578" /gene_synonym="dprA" /gene_synonym="ECK0570" /gene_synonym="JW0567" /gene_synonym="nfnB" /gene_synonym="nfsI" /gene_synonym="ntr" /EC_number="1.5.1.34" /function="enzyme; Drug/analog sensitivity" /experiment="N-terminus verified by Edman degradation: PMID 1472094,3060113,9298646" /note="oxygen-insensitive NAD(P)H nitroreductase; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive" /protein_id="AAC73679.1" /db_xref="GI:1786792" /db_xref="ASAP:ABE-0001981" /db_xref="UniProtKB/Swiss-Prot:P38489" /db_xref="EcoGene:EG20151" /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ PWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQE DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV" gene complement(490244..490612) /gene="ybdF" /locus_tag="b0579" /gene_synonym="ECK0571" /gene_synonym="JW5083" /db_xref="EcoGene:EG12619" CDS complement(490244..490612) /gene="ybdF" /locus_tag="b0579" /gene_synonym="ECK0571" /gene_synonym="JW5083" /codon_start=1 /transl_table=11 /product="DUF419 family protein" /protein_id="AAC73680.1" /db_xref="GI:1786793" /db_xref="ASAP:ABE-0001986" /db_xref="UniProtKB/Swiss-Prot:P0AAT2" /db_xref="EcoGene:EG12619" /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND SWNLVVDGLAKRDQKRVRPG" gene complement(490677..490925) /gene="ybdJ" /locus_tag="b0580" /gene_synonym="ECK0572" /gene_synonym="JW0569" /db_xref="EcoGene:EG13643" CDS complement(490677..490925) /gene="ybdJ" /locus_tag="b0580" /gene_synonym="ECK0572" /gene_synonym="JW0569" /codon_start=1 /transl_table=11 /product="DUF1158 family putative inner membrane protein" /protein_id="AAC73681.1" /db_xref="GI:1786794" /db_xref="ASAP:ABE-0001988" /db_xref="UniProtKB/Swiss-Prot:P77506" /db_xref="EcoGene:EG13643" /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHL MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD" gene complement(490991..492109) /gene="ybdK" /locus_tag="b0581" /gene_synonym="ECK0573" /gene_synonym="JW0570" /db_xref="EcoGene:EG13644" CDS complement(490991..492109) /gene="ybdK" /locus_tag="b0581" /gene_synonym="ECK0573" /gene_synonym="JW0570" /EC_number="6.3.2.2" /codon_start=1 /transl_table=11 /product="weak gamma-glutamyl:cysteine ligase" /protein_id="AAC73682.1" /db_xref="GI:1786795" /db_xref="ASAP:ABE-0001992" /db_xref="UniProtKB/Swiss-Prot:P77213" /db_xref="EcoGene:EG13644" /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNK ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPF QKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPH FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD" gene 492460..492518 /gene="sokE" /locus_tag="b4700" /gene_synonym="ECK4512" /db_xref="EcoGene:EG31186" ncRNA 492460..492518 /ncRNA_class="antisense_RNA" /gene="sokE" /locus_tag="b4700" /gene_synonym="ECK4512" /product="sRNA at remnant mokE/hokE locus" /db_xref="EcoGene:EG31186" gene 492562..492714 /gene="hokE" /locus_tag="b4415" /gene_synonym="ECK0574" /gene_synonym="JW5084" /gene_synonym="ybdY" /db_xref="EcoGene:EG14302" CDS 492562..492714 /gene="hokE" /locus_tag="b4415" /gene_synonym="ECK0574" /gene_synonym="JW5084" /gene_synonym="ybdY" /function="component of addiction module (incomplete)" /note="small toxic membrane polypeptide; the corresponding mokE lacks a start codon, and the regulatory RNA sokE has not been identified" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="AAT48125.1" /db_xref="GI:48994879" /db_xref="ASAP:ABE-0047279" /db_xref="UniProtKB/Swiss-Prot:P77091" /db_xref="EcoGene:EG14302" /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL AYEPKK" mobile_element 492733..494077 /mobile_element_type="insertion sequence:IS186B" gene 492791..493903 /gene="insL1" /locus_tag="b0582" /gene_synonym="ECK0016" /db_xref="EcoGene:EG40012" CDS 492791..493903 /gene="insL1" /locus_tag="b0582" /gene_synonym="ECK0016" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS186 transposase" /protein_id="AAC73683.1" /db_xref="GI:1786796" /db_xref="ASAP:ABE-0002007" /db_xref="UniProtKB/Swiss-Prot:P0CF92" /db_xref="EcoGene:EG40012" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(494185..494805) /gene="entD" /locus_tag="b0583" /gene_synonym="ECK0575" /gene_synonym="JW5085" /db_xref="EcoGene:EG10262" CDS complement(494185..494805) /gene="entD" /locus_tag="b0583" /gene_synonym="ECK0575" /gene_synonym="JW5085" /EC_number="2.7.8.-" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /note="enterochelin synthetase, component D; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009239 - enterobactin biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex" /protein_id="AAC73684.2" /db_xref="GI:345297172" /db_xref="ASAP:ABE-0002009" /db_xref="UniProtKB/Swiss-Prot:P19925" /db_xref="EcoGene:EG10262" /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR KRKTEHLAGRIAAVYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGTTALAVVSRQ PIGIDIEEIFSVQTARELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD" repeat_region 494843..494940 /note="RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(494980..497220) /gene="fepA" /locus_tag="b0584" /gene_synonym="cbr" /gene_synonym="cbt" /gene_synonym="ECK0576" /gene_synonym="fep" /gene_synonym="feuB" /gene_synonym="JW5086" /db_xref="EcoGene:EG10293" CDS complement(494980..497220) /gene="fepA" /locus_tag="b0584" /gene_synonym="cbr" /gene_synonym="cbt" /gene_synonym="ECK0576" /gene_synonym="fep" /gene_synonym="feuB" /gene_synonym="JW5086" /function="membrane; Transport of small molecules: Cations" /note="outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferrienterobactin outer membrane transporter" /protein_id="AAC73685.1" /db_xref="GI:1786798" /db_xref="ASAP:ABE-0002014" /db_xref="UniProtKB/Swiss-Prot:P05825" /db_xref="EcoGene:EG10293" /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN LQAPGVSTITADEIRKNPVARDVSKIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS RQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHT RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN QQRMKDLSSNTQALTGTNTGGAIDGVSTTDRSPYSKAEIFSLFAENNMELTDSTIVTP GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM SVNTHF" gene 497463..498665 /gene="fes" /locus_tag="b0585" /gene_synonym="ECK0577" /gene_synonym="JW0576" /db_xref="EcoGene:EG10299" CDS 497463..498665 /gene="fes" /locus_tag="b0585" /gene_synonym="ECK0577" /gene_synonym="JW0576" /function="enzyme; Transport of small molecules: Cations" /note="enterochelin esterase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="enterobactin/ferrienterobactin esterase" /protein_id="AAC73686.2" /db_xref="GI:558094915" /db_xref="ASAP:ABE-0002019" /db_xref="UniProtKB/Swiss-Prot:P13039" /db_xref="EcoGene:EG10299" /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS TIKRVWVYITGVTDHHQNSQPQSMQRIAGTNVWQWTTQLNANWRGSYCFIPTERDDIF SVPSPDRLELREGWRKLLPQAIADPLNLQSWKGGRGHAVSALEMPQAPLQPGWDCPQA PEIPAKEIIWKSERLKKSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW QPLFHDRS" gene 498668..498886 /gene="ybdZ" /locus_tag="b4511" /gene_synonym="ECK0578" /gene_synonym="JW0577" /gene_synonym="mbtH" /db_xref="EcoGene:EG14353" CDS 498668..498886 /gene="ybdZ" /locus_tag="b4511" /gene_synonym="ECK0578" /gene_synonym="JW0577" /gene_synonym="mbtH" /function="Enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="stimulator of EntF adenylation activity, MbtH-like" /protein_id="ABD18641.1" /db_xref="GI:87081760" /db_xref="ASAP:ABE-0285032" /db_xref="UniProtKB/Swiss-Prot:P18393" /db_xref="EcoGene:EG14353" /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQ SQASCQQWLEAHWRTLTPTNFTQLQEAQ" gene 498883..502764 /gene="entF" /locus_tag="b0586" /gene_synonym="ECK0579" /gene_synonym="JW0578" /db_xref="EcoGene:EG10264" CDS 498883..502764 /gene="entF" /locus_tag="b0586" /gene_synonym="ECK0579" /gene_synonym="JW0578" /EC_number="2.7.7.-" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 1826089,2974033" /note="ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009239 - enterobactin biosynthetic process; GO_process: GO:0015937 - coenzyme A biosynthetic process; GO_process: GO:0019184 - nonribosomal peptide biosynthetic process; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="enterobactin synthase multienzyme complex component, ATP-dependent" /protein_id="AAC73687.1" /db_xref="GI:1786801" /db_xref="ASAP:ABE-0002021" /db_xref="UniProtKB/Swiss-Prot:P11454" /db_xref="EcoGene:EG10264" /translation="MSQHLPLVAAQPGIWMAEKLSELPSAWSVAHYVELTGEVDSPLL ARAVVAGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR SASADILRLKLEFTDGEFRQLATQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFM RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD SGRAAGDEPLFGPVLNIKVFDYQLDIPDVQAQTHTLATGPVNDLELALFPDVHGDLSI EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQLNATQV EIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSV AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF SDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL LWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGA PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRS DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG LPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAPGRAP KAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYL DPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL DIYRQDCAHVDIISPGTFEKIGPIIRATLNR" gene 502980..504113 /gene="fepE" /locus_tag="b0587" /gene_synonym="ECK0580" /gene_synonym="JW0579" /db_xref="EcoGene:EG10297" CDS 502980..504113 /gene="fepE" /locus_tag="b0587" /gene_synonym="ECK0580" /gene_synonym="JW0579" /function="transport; Transport of small molecules: Cations" /note="ferric enterobactin (enterochelin) transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="regulator of length of O-antigen component of lipopolysaccharide chains" /protein_id="AAC73688.1" /db_xref="GI:1786802" /db_xref="ASAP:ABE-0002023" /db_xref="UniProtKB/Swiss-Prot:P26266" /db_xref="EcoGene:EG10297" /translation="MSSLNIKQGSDAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVM AVVFAFACAGLLISFILPQKWTSAAVVTPPEPVQWQELEKSFTKLRVLDLDIKIDRTE AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS KKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFE KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKD GPGKAIIVILSALIGGMVACGGVLLRYAMASRKQDAMMADHLV" gene complement(504110..504925) /gene="fepC" /locus_tag="b0588" /gene_synonym="ECK0581" /gene_synonym="JW0580" /db_xref="EcoGene:EG10295" CDS complement(504110..504925) /gene="fepC" /locus_tag="b0588" /gene_synonym="ECK0581" /gene_synonym="JW0580" /function="transport; Transport of small molecules: Cations" /note="ATP-binding component of ferric enterobactin transport; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferrienterobactin ABC transporter ATPase" /protein_id="AAC73689.1" /db_xref="GI:1786803" /db_xref="ASAP:ABE-0002025" /db_xref="UniProtKB/Swiss-Prot:P23878" /db_xref="EcoGene:EG10295" /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC GKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELV ARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLGRTAPSTANS" gene complement(504922..505914) /gene="fepG" /locus_tag="b0589" /gene_synonym="ECK0582" /gene_synonym="JW0581" /db_xref="EcoGene:EG10298" CDS complement(504922..505914) /gene="fepG" /locus_tag="b0589" /gene_synonym="ECK0582" /gene_synonym="JW0581" /function="transport; Transport of small molecules: Cations" /note="ferric enterobactin transport protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="iron-enterobactin ABC transporter permease" /protein_id="AAC73690.1" /db_xref="GI:1786804" /db_xref="ASAP:ABE-0002027" /db_xref="UniProtKB/Swiss-Prot:P23877" /db_xref="EcoGene:EG10298" /translation="MIYVSRRLLITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALM GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS GVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK" gene complement(505911..506915) /gene="fepD" /locus_tag="b0590" /gene_synonym="ECK0583" /gene_synonym="JW0582" /db_xref="EcoGene:EG10296" CDS complement(505911..506915) /gene="fepD" /locus_tag="b0590" /gene_synonym="ECK0583" /gene_synonym="JW0582" /function="transport; Transport of small molecules: Cations" /note="ferric enterobactin (enterochelin) transport; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferrienterobactin ABC transporter permease" /protein_id="AAC73691.1" /db_xref="GI:1786805" /db_xref="ASAP:ABE-0002031" /db_xref="UniProtKB/Swiss-Prot:P23876" /db_xref="EcoGene:EG10296" /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGA DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA " gene 507026..508276 /gene="entS" /locus_tag="b0591" /gene_synonym="ECK0584" /gene_synonym="JW0583" /gene_synonym="ybdA" /db_xref="EcoGene:EG11104" CDS 507026..508276 /gene="entS" /locus_tag="b0591" /gene_synonym="ECK0584" /gene_synonym="JW0583" /gene_synonym="ybdA" /function="putative transport; Not classified" /note="putative transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="enterobactin exporter, iron-regulated" /protein_id="AAC73692.1" /db_xref="GI:1786806" /db_xref="ASAP:ABE-0002036" /db_xref="UniProtKB/Swiss-Prot:P24077" /db_xref="EcoGene:EG11104" /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI QMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGAL TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV LLLLVLVELRHFRQTPPQVTASDS" gene complement(508280..509236) /gene="fepB" /locus_tag="b0592" /gene_synonym="ECK0585" /gene_synonym="JW0584" /db_xref="EcoGene:EG10294" CDS complement(508280..509236) /gene="fepB" /locus_tag="b0592" /gene_synonym="ECK0585" /gene_synonym="JW0584" /function="transport; Transport of small molecules: Cations" /note="ferric enterobactin (enterochelin) binding protein; periplasmic component; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferrienterobactin ABC transporter periplasmic binding protein" /protein_id="AAC73693.1" /db_xref="GI:1786807" /db_xref="ASAP:ABE-0002038" /db_xref="UniProtKB/Swiss-Prot:P0AEL6" /db_xref="EcoGene:EG10294" /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM LEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIY ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLDRLKALF" gene 509611..510786 /gene="entC" /locus_tag="b0593" /gene_synonym="ECK0586" /gene_synonym="fepF" /gene_synonym="JW0585" /db_xref="EcoGene:EG10261" CDS 509611..510786 /gene="entC" /locus_tag="b0593" /gene_synonym="ECK0586" /gene_synonym="fepF" /gene_synonym="JW0585" /EC_number="5.4.4.2" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 2521622" /note="isochorismate hydroxymutase 2, enterochelin biosynthesis; GO_process: GO:0009239 - enterobactin biosynthetic process" /codon_start=1 /transl_table=11 /product="isochorismate synthase 1" /protein_id="AAC73694.1" /db_xref="GI:1786809" /db_xref="ASAP:ABE-0002047" /db_xref="UniProtKB/Swiss-Prot:P0AEJ2" /db_xref="EcoGene:EG10261" /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV NGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH" gene 510796..512406 /gene="entE" /locus_tag="b0594" /gene_synonym="ECK0587" /gene_synonym="JW0586" /db_xref="EcoGene:EG10263" CDS 510796..512406 /gene="entE" /locus_tag="b0594" /gene_synonym="ECK0587" /gene_synonym="JW0586" /EC_number="2.7.7.58" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /note="2,3-dihydroxybenzoate-AMP ligase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009239 - enterobactin biosynthetic process; GO_process: GO:0019184 - nonribosomal peptide biosynthetic process" /codon_start=1 /transl_table=11 /product="2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex" /protein_id="AAC73695.1" /db_xref="GI:1786810" /db_xref="ASAP:ABE-0002049" /db_xref="UniProtKB/Swiss-Prot:P10378" /db_xref="EcoGene:EG10263" /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID GERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT ALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE CVDSLPLTAVGKVDKKQLRQWLASRASA" gene 512420..513277 /gene="entB" /locus_tag="b0595" /gene_synonym="ECK0588" /gene_synonym="entG" /gene_synonym="JW0587" /db_xref="EcoGene:EG10260" CDS 512420..513277 /gene="entB" /locus_tag="b0595" /gene_synonym="ECK0588" /gene_synonym="entG" /gene_synonym="JW0587" /EC_number="3.3.2.1" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /note="2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009239 - enterobactin biosynthetic process; GO_process: GO:0019184 - nonribosomal peptide biosynthetic process" /codon_start=1 /transl_table=11 /product="isochorismatase" /protein_id="AAC73696.1" /db_xref="GI:1786811" /db_xref="ASAP:ABE-0002052" /db_xref="UniProtKB/Swiss-Prot:P0ADI4" /db_xref="EcoGene:EG10260" /translation="MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVS FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAAL REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW WKLLSREVK" gene 513277..514023 /gene="entA" /locus_tag="b0596" /gene_synonym="ECK0589" /gene_synonym="JW0588" /db_xref="EcoGene:EG10259" CDS 513277..514023 /gene="entA" /locus_tag="b0596" /gene_synonym="ECK0589" /gene_synonym="JW0588" /EC_number="1.3.1.28" /function="enzyme; Biosynthesis of cofactors, carriers: Enterochelin" /experiment="N-terminus verified by Edman degradation: PMID 2521622" /note="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; GO_process: GO:0009239 - enterobactin biosynthetic process" /codon_start=1 /transl_table=11 /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" /protein_id="AAC73697.1" /db_xref="GI:1786812" /db_xref="ASAP:ABE-0002054" /db_xref="UniProtKB/Swiss-Prot:P15047" /db_xref="EcoGene:EG10259" /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAV NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI ANTILFLASDLASHITLQDIVVDGGSTLGA" gene 514026..514439 /gene="entH" /locus_tag="b0597" /gene_synonym="ECK0590" /gene_synonym="JW0589" /gene_synonym="ybdB" /db_xref="EcoGene:EG11105" CDS 514026..514439 /gene="entH" /locus_tag="b0597" /gene_synonym="ECK0590" /gene_synonym="JW0589" /gene_synonym="ybdB" /codon_start=1 /transl_table=11 /product="enterobactin synthesis proofreading thioesterase" /protein_id="AAC73698.1" /db_xref="GI:1786813" /db_xref="ASAP:ABE-0002057" /db_xref="UniProtKB/Swiss-Prot:P0A8Y8" /db_xref="EcoGene:EG11105" /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG" gene 514620..516725 /gene="cstA" /locus_tag="b0598" /gene_synonym="dppG?" /gene_synonym="ECK0591" /gene_synonym="JW0590" /gene_synonym="ybdC" /db_xref="EcoGene:EG10167" CDS 514620..516725 /gene="cstA" /locus_tag="b0598" /gene_synonym="dppG?" /gene_synonym="ECK0591" /gene_synonym="JW0590" /gene_synonym="ybdC" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="carbon starvation protein involved in peptide utilization; APC peptide transporter family protein" /protein_id="AAC73699.1" /db_xref="GI:1786814" /db_xref="ASAP:ABE-0002061" /db_xref="UniProtKB/Swiss-Prot:P15078" /db_xref="EcoGene:EG10167" /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI YLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP YEPMPENVEEIVAQAKGAH" repeat_region 516841..516874 /note="REP55 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 516908..517105 /gene="ybdD" /locus_tag="b4512" /gene_synonym="ECK0592" /gene_synonym="JW0591" /db_xref="EcoGene:EG11107" CDS 516908..517105 /gene="ybdD" /locus_tag="b4512" /gene_synonym="ECK0592" /gene_synonym="JW0591" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DUF466 family protein" /protein_id="ABD18642.1" /db_xref="GI:87081761" /db_xref="ASAP:ABE-0285033" /db_xref="UniProtKB/Swiss-Prot:P0AAS9" /db_xref="EcoGene:EG11107" /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY EEFFRERQDARYGGKGGARCC" gene complement(517115..518203) /gene="ybdH" /locus_tag="b0599" /gene_synonym="ECK0593" /gene_synonym="JW0592" /db_xref="EcoGene:EG12692" CDS complement(517115..518203) /gene="ybdH" /locus_tag="b0599" /gene_synonym="ECK0593" /gene_synonym="JW0592" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC73700.1" /db_xref="GI:1786815" /db_xref="ASAP:ABE-0002065" /db_xref="UniProtKB/Swiss-Prot:P45579" /db_xref="EcoGene:EG12692" /translation="MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKR AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALS DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP VESIHYLPVTLTPDTLRAAFKKVESFKA" gene 518312..519472 /gene="ybdL" /locus_tag="b0600" /gene_synonym="ECK0594" /gene_synonym="JW0593" /db_xref="EcoGene:EG13531" CDS 518312..519472 /gene="ybdL" /locus_tag="b0600" /gene_synonym="ECK0594" /gene_synonym="JW0593" /EC_number="2.6.1.-" /function="putative enzyme; Not classified" /note="PLP-dependent methionine aminotransferase; GO_process: GO:0008152 - metabolic process" /codon_start=1 /transl_table=11 /product="methionine aminotransferase, PLP-dependent" /protein_id="AAC73701.1" /db_xref="GI:1786816" /db_xref="ASAP:ABE-0002069" /db_xref="UniProtKB/Swiss-Prot:P77806" /db_xref="EcoGene:EG13531" /translation="MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDG PRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATE ALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA LADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDD VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL" gene complement(519473..520102) /gene="ybdM" /locus_tag="b0601" /gene_synonym="ECK0595" /gene_synonym="JW0594" /db_xref="EcoGene:EG13532" CDS complement(519473..520102) /gene="ybdM" /locus_tag="b0601" /gene_synonym="ECK0595" /gene_synonym="JW0594" /codon_start=1 /transl_table=11 /product="Spo0J family protein, ParB-like nuclease domain" /protein_id="AAC73702.1" /db_xref="GI:1786817" /db_xref="ASAP:ABE-0002071" /db_xref="UniProtKB/Swiss-Prot:P77174" /db_xref="EcoGene:EG13532" /translation="MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFRE EPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIV DGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK" gene complement(520075..521295) /gene="ybdN" /locus_tag="b0602" /gene_synonym="ECK0596" /gene_synonym="JW0595" /db_xref="EcoGene:EG13533" CDS complement(520075..521295) /gene="ybdN" /locus_tag="b0602" /gene_synonym="ECK0596" /gene_synonym="JW0595" /codon_start=1 /transl_table=11 /product="PAPS reductase-like domain protein" /protein_id="AAC73703.1" /db_xref="GI:1786818" /db_xref="ASAP:ABE-0002073" /db_xref="UniProtKB/Swiss-Prot:P77216" /db_xref="EcoGene:EG13533" /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHW YQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKSKNYQRYNERI KGKRQEWGILCNND" gene complement(521442..522344) /gene="ybdO" /locus_tag="b0603" /gene_synonym="ECK0597" /gene_synonym="JW0596" /db_xref="EcoGene:EG13534" CDS complement(521442..522344) /gene="ybdO" /locus_tag="b0603" /gene_synonym="ECK0597" /gene_synonym="JW0596" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC73704.1" /db_xref="GI:1786820" /db_xref="ASAP:ABE-0002077" /db_xref="UniProtKB/Swiss-Prot:P77746" /db_xref="EcoGene:EG13534" /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQS LQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFII YGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVIS RSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDER FMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLY ISYNKSSLNNLVFSRFIDRLNESF" gene complement(522553..523299) /gene="dsbG" /locus_tag="b0604" /gene_synonym="ECK0598" /gene_synonym="JW0597" /gene_synonym="ybdP" /db_xref="EcoGene:EG13535" CDS complement(522553..523299) /gene="dsbG" /locus_tag="b0604" /gene_synonym="ECK0598" /gene_synonym="JW0597" /gene_synonym="ybdP" /EC_number="5.3.4.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="thiol:disulfide interchange protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein, periplasmic" /protein_id="AAC73705.2" /db_xref="GI:87081762" /db_xref="ASAP:ABE-0002084" /db_xref="UniProtKB/Swiss-Prot:P77202" /db_xref="EcoGene:EG13535" /translation="MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGM KGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRME QSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESP ATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTP AIYYMSKENTLQQAVGLPDQKTLNIIMGNK" gene 523671..524234 /gene="ahpC" /locus_tag="b0605" /gene_synonym="ECK0599" /gene_synonym="JW0598" /gene_synonym="tpx" /db_xref="EcoGene:EG11384" CDS 523671..524234 /gene="ahpC" /locus_tag="b0605" /gene_synonym="ECK0599" /gene_synonym="JW0598" /gene_synonym="tpx" /EC_number="1.11.1.15" /function="enzyme; Detoxification" /note="alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase, C22 subunit" /protein_id="AAC73706.1" /db_xref="GI:1786822" /db_xref="ASAP:ABE-0002090" /db_xref="UniProtKB/Swiss-Prot:P0AE08" /db_xref="EcoGene:EG11384" /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS HPGEVCPAKWKEGEATLAPSLDLVGKI" gene 524479..526044 /gene="ahpF" /locus_tag="b0606" /gene_synonym="ECK0600" /gene_synonym="JW0599" /db_xref="EcoGene:EG11385" CDS 524479..526044 /gene="ahpF" /locus_tag="b0606" /gene_synonym="ECK0600" /gene_synonym="JW0599" /EC_number="1.11.1.15" /function="enzyme; Detoxification" /note="alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding" /protein_id="AAC73707.2" /db_xref="GI:87081763" /db_xref="ASAP:ABE-0002093" /db_xref="UniProtKB/Swiss-Prot:P35340" /db_xref="EcoGene:EG11385" /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS LSAFDYLIRTKTA" gene complement(526165..526593) /gene="uspG" /locus_tag="b0607" /gene_synonym="ECK0601" /gene_synonym="JW0600" /gene_synonym="UP12" /gene_synonym="ybdQ" /gene_synonym="yzzU" /db_xref="EcoGene:EG12683" CDS complement(526165..526593) /gene="uspG" /locus_tag="b0607" /gene_synonym="ECK0601" /gene_synonym="JW0600" /gene_synonym="UP12" /gene_synonym="ybdQ" /gene_synonym="yzzU" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646,9600841" /codon_start=1 /transl_table=11 /product="universal stress protein UP12" /protein_id="AAC73708.1" /db_xref="GI:1786824" /db_xref="ASAP:ABE-0002095" /db_xref="UniProtKB/Swiss-Prot:P39177" /db_xref="EcoGene:EG12683" /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSA SLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR" gene 526814..528052 /gene="ybdR" /locus_tag="b0608" /gene_synonym="ECK0602" /gene_synonym="JW0601" /db_xref="EcoGene:EG13537" CDS 526814..528052 /gene="ybdR" /locus_tag="b0608" /gene_synonym="ECK0602" /gene_synonym="JW0601" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC73709.1" /db_xref="GI:1786825" /db_xref="ASAP:ABE-0002099" /db_xref="UniProtKB/Swiss-Prot:P77316" /db_xref="EcoGene:EG13537" /translation="MKALTYHGPHHVQVENVPDPGVEQADDIILRITATAICGSDLHL YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYA ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD HHPYRLHFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLSFKMGQT HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS AEAAQKAVSGLVNAMPGGTI" gene complement(528283..528693) /gene="rnk" /locus_tag="b0610" /gene_synonym="ECK0603" /gene_synonym="JW0602" /db_xref="EcoGene:EG12637" CDS complement(528283..528693) /gene="rnk" /locus_tag="b0610" /gene_synonym="ECK0603" /gene_synonym="JW0602" /function="regulator; Central intermediary metabolism: Nucleotide interconversions" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="regulator of nucleoside diphosphate kinase" /protein_id="AAC73711.1" /db_xref="GI:1786827" /db_xref="ASAP:ABE-0002104" /db_xref="UniProtKB/Swiss-Prot:P0AFW4" /db_xref="EcoGene:EG12637" /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL" gene complement(528923..529729) /gene="rna" /locus_tag="b0611" /gene_synonym="ECK0604" /gene_synonym="JW0603" /gene_synonym="rnsA" /db_xref="EcoGene:EG10856" CDS complement(528923..529729) /gene="rna" /locus_tag="b0611" /gene_synonym="ECK0604" /gene_synonym="JW0603" /gene_synonym="rnsA" /EC_number="3.1.27.6" /function="enzyme; Degradation of RNA" /note="RNase I, cleaves phosphodiester bond between any two nucleotides; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="ribonuclease I" /protein_id="AAC73712.1" /db_xref="GI:1786828" /db_xref="ASAP:ABE-0002107" /db_xref="UniProtKB/Swiss-Prot:P21338" /db_xref="EcoGene:EG10856" /translation="MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQ TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG CATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY" gene complement(529843..531306) /gene="citT" /locus_tag="b0612" /gene_synonym="ECK0605" /gene_synonym="JW0604" /gene_synonym="ybdS" /db_xref="EcoGene:EG13538" CDS complement(529843..531306) /gene="citT" /locus_tag="b0612" /gene_synonym="ECK0605" /gene_synonym="JW0604" /gene_synonym="ybdS" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="citrate/succinate antiporter; citrate carrier" /protein_id="AAC73713.1" /db_xref="GI:1786829" /db_xref="ASAP:ABE-0002110" /db_xref="UniProtKB/Swiss-Prot:P0AE74" /db_xref="EcoGene:EG13538" /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAM IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL GLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDE LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN" gene complement(531357..532235) /gene="citG" /locus_tag="b0613" /gene_synonym="ECK0606" /gene_synonym="JW0605" /gene_synonym="ybdT" /db_xref="EcoGene:EG13539" CDS complement(531357..532235) /gene="citG" /locus_tag="b0613" /gene_synonym="ECK0606" /gene_synonym="JW0605" /gene_synonym="ybdT" /EC_number="2.4.2.52" /note="GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase" /protein_id="AAC73714.1" /db_xref="GI:1786830" /db_xref="ASAP:ABE-0002114" /db_xref="UniProtKB/Swiss-Prot:P77231" /db_xref="EcoGene:EG13539" /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN NSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL LMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSP GGSADLLILTWFLAQI" gene complement(532210..532761) /gene="citX" /locus_tag="b0614" /gene_synonym="ECK0607" /gene_synonym="JW0606" /gene_synonym="ybdU" /db_xref="EcoGene:EG13540" CDS complement(532210..532761) /gene="citX" /locus_tag="b0614" /gene_synonym="ECK0607" /gene_synonym="JW0606" /gene_synonym="ybdU" /EC_number="2.7.7.61" /note="GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="apo-citrate lyase phosphoribosyl-dephospho-CoA transferase" /protein_id="AAC73715.1" /db_xref="GI:1786831" /db_xref="ASAP:ABE-0002116" /db_xref="UniProtKB/Swiss-Prot:P0A6G5" /db_xref="EcoGene:EG13540" /translation="MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFT VVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPAR DLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKT HQLTDLLNRMEALLNDVDACNVN" gene complement(532765..534297) /gene="citF" /locus_tag="b0615" /gene_synonym="ECK0608" /gene_synonym="JW5087" /gene_synonym="ybdV" /db_xref="EcoGene:EG13541" CDS complement(532765..534297) /gene="citF" /locus_tag="b0615" /gene_synonym="ECK0608" /gene_synonym="JW5087" /gene_synonym="ybdV" /EC_number="2.8.3.10" /EC_number="4.1.3.6" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="citrate lyase alpha chain; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="citrate lyase, citrate-ACP transferase (alpha) subunit" /protein_id="AAC73716.1" /db_xref="GI:1786832" /db_xref="ASAP:ABE-0002119" /db_xref="UniProtKB/Swiss-Prot:P75726" /db_xref="EcoGene:EG13541" /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR KLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI DVAFLGVPSCDEFGNANGYTGKACCGSLGYAIVDADNAKQVVMLTEELLPYPHNPASI EQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV KE" gene complement(534308..535216) /gene="citE" /locus_tag="b0616" /gene_synonym="ECK0609" /gene_synonym="JW0608" /gene_synonym="ybdW" /db_xref="EcoGene:EG13542" CDS complement(534308..535216) /gene="citE" /locus_tag="b0616" /gene_synonym="ECK0609" /gene_synonym="JW0608" /gene_synonym="ybdW" /EC_number="4.1.3.34" /EC_number="4.1.3.6" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="citrate lyase, citryl-ACP lyase (beta) subunit" /protein_id="AAC73717.2" /db_xref="GI:87081764" /db_xref="ASAP:ABE-0002122" /db_xref="UniProtKB/Swiss-Prot:P0A9I1" /db_xref="EcoGene:EG13542" /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG KMVDGPVIDRARLVLSRAELSGIREE" gene complement(535213..535509) /gene="citD" /locus_tag="b0617" /gene_synonym="ECK0610" /gene_synonym="JW0609" /gene_synonym="ybdX" /db_xref="EcoGene:EG13543" CDS complement(535213..535509) /gene="citD" /locus_tag="b0617" /gene_synonym="ECK0610" /gene_synonym="JW0609" /gene_synonym="ybdX" /EC_number="4.1.3.6" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="citrate lyase acyl carrier protein (gamma chain); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042967 - acyl-carrier-protein biosynthetic process" /codon_start=1 /transl_table=11 /product="citrate lyase, acyl carrier (gamma) subunit" /protein_id="AAC73718.1" /db_xref="GI:1786834" /db_xref="ASAP:ABE-0002124" /db_xref="UniProtKB/Swiss-Prot:P69330" /db_xref="EcoGene:EG13543" /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA IRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ" gene complement(535524..536582) /gene="citC" /locus_tag="b0618" /gene_synonym="ECK0611" /gene_synonym="JW0610" /gene_synonym="ybeO" /db_xref="EcoGene:EG13645" CDS complement(535524..536582) /gene="citC" /locus_tag="b0618" /gene_synonym="ECK0611" /gene_synonym="JW0610" /gene_synonym="ybeO" /EC_number="6.2.1.22" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="citrate lyase synthetase (citrate (pro-3S)-lyase ligase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="citrate lyase ligase; [citrate [pro-3S]-lyase] ligase" /protein_id="AAC73719.2" /db_xref="GI:87081765" /db_xref="ASAP:ABE-0002126" /db_xref="UniProtKB/Swiss-Prot:P77390" /db_xref="EcoGene:EG13645" /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR YWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ NLLEHSRQDAAARQKTPA" gene 536961..538619 /gene="citA" /locus_tag="b0619" /gene_synonym="criS" /gene_synonym="dpiB" /gene_synonym="ECK0612" /gene_synonym="JW0611" /gene_synonym="mpdB" /gene_synonym="ybeP" /db_xref="EcoGene:EG13646" CDS 536961..538619 /gene="citA" /locus_tag="b0619" /gene_synonym="criS" /gene_synonym="dpiB" /gene_synonym="ECK0612" /gene_synonym="JW0611" /gene_synonym="mpdB" /gene_synonym="ybeP" /function="regulator; Degradation of small molecules: Carbon compounds" /note="putative sensor-type protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with CitB" /protein_id="AAC73720.1" /db_xref="GI:1786837" /db_xref="ASAP:ABE-0002129" /db_xref="UniProtKB/Swiss-Prot:P77510" /db_xref="EcoGene:EG13646" /translation="MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTAS FEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGD RHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVI GVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIA RVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIVEVVRPA DFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQ IKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFAD RQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLR SDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLY LIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR" gene 538588..539268 /gene="citB" /locus_tag="b0620" /gene_synonym="criR" /gene_synonym="dpiA" /gene_synonym="ECK0613" /gene_synonym="JW0612" /gene_synonym="mpdA" /db_xref="EcoGene:EG13544" CDS 538588..539268 /gene="citB" /locus_tag="b0620" /gene_synonym="criR" /gene_synonym="dpiA" /gene_synonym="ECK0613" /gene_synonym="JW0612" /gene_synonym="mpdA" /function="regulator; Degradation of small molecules: Carbon compounds" /note="sequence similarity to Shigella regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with CitA" /protein_id="AAC73721.1" /db_xref="GI:1786838" /db_xref="ASAP:ABE-0002131" /db_xref="UniProtKB/Swiss-Prot:P0AEF4" /db_xref="EcoGene:EG13544" /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID PLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGR PQRIYHSG" repeat_region 539278..539300 /note="REP56 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(539309..540694) /gene="dcuC" /locus_tag="b0621" /gene_synonym="ECK0614" /gene_synonym="JW0613" /gene_synonym="JW0616" /db_xref="EcoGene:EG13545" CDS complement(539309..540694) /gene="dcuC" /locus_tag="b0621" /gene_synonym="ECK0614" /gene_synonym="JW0613" /gene_synonym="JW0616" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="transport of dicarboxylates; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="anaerobic C4-dicarboxylate transport" /protein_id="AAC73722.1" /db_xref="GI:1786839" /db_xref="ASAP:ABE-0002133" /db_xref="UniProtKB/Swiss-Prot:P0ABP3" /db_xref="EcoGene:EG13545" /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM VPGTAAAVTGK" gene 541283..541843 /gene="pagP" /locus_tag="b0622" /gene_synonym="crcA" /gene_synonym="ECK0615" /gene_synonym="JW0617" /gene_synonym="ybeG" /db_xref="EcoGene:EG12180" CDS 541283..541843 /gene="pagP" /locus_tag="b0622" /gene_synonym="crcA" /gene_synonym="ECK0615" /gene_synonym="JW0617" /gene_synonym="ybeG" /EC_number="2.3.1.-" /function="enzyme; Surface polysaccharides & antigens" /codon_start=1 /transl_table=11 /product="phospholipid:lipid A palmitoyltransferase" /protein_id="AAC73723.1" /db_xref="GI:1786840" /db_xref="ASAP:ABE-0002139" /db_xref="UniProtKB/Swiss-Prot:P37001" /db_xref="EcoGene:EG12180" /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQ PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP VTFQMTYIPGTYNNGNVYFAWMRFQF" gene 542018..542227 /gene="cspE" /locus_tag="b0623" /gene_synonym="ECK0616" /gene_synonym="gicA" /gene_synonym="JW0618" /gene_synonym="msmC" /db_xref="EcoGene:EG12179" CDS 542018..542227 /gene="cspE" /locus_tag="b0623" /gene_synonym="ECK0616" /gene_synonym="gicA" /gene_synonym="JW0618" /gene_synonym="msmC" /function="phenotype; Not classified" /note="cold shock protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein" /protein_id="AAC73724.1" /db_xref="GI:1786841" /db_xref="ASAP:ABE-0002142" /db_xref="UniProtKB/Swiss-Prot:P0A972" /db_xref="EcoGene:EG12179" /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL AEGQRVEFEITNGAKGPSAANVIAL" gene complement(542281..542664) /gene="flc" /locus_tag="b0624" /gene_synonym="crcB" /gene_synonym="ECK0617" /gene_synonym="fluC" /gene_synonym="JW0619" /gene_synonym="ybeI" /db_xref="EcoGene:EG12209" CDS complement(542281..542664) /gene="flc" /locus_tag="b0624" /gene_synonym="crcB" /gene_synonym="ECK0617" /gene_synonym="fluC" /gene_synonym="JW0619" /gene_synonym="ybeI" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="fluoride efflux channel, dual topology membrane protein" /protein_id="AAC73725.1" /db_xref="GI:1786842" /db_xref="ASAP:ABE-0002144" /db_xref="UniProtKB/Swiss-Prot:P37002" /db_xref="EcoGene:EG12209" /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG AFIIGIGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN VFVNLLGSFAMTALAFWLFSASTAH" gene 542757..543544 /gene="ybeM" /locus_tag="b4581" /gene_synonym="ECK0618" /gene_synonym="JW0620" /gene_synonym="ybeH" /pseudo /db_xref="EcoGene:EG13162" CDS join(542757..542951,542951..543544) /gene="ybeM" /locus_tag="b4581" /gene_synonym="ECK0618" /gene_synonym="JW0620" /gene_synonym="ybeH" /note="pseudogene, C-N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002148" /db_xref="ASAP:ABE-0002150" /db_xref="ASAP:ABE-0285113" /db_xref="UniProtKB/Swiss-Prot:P39874" /db_xref="EcoGene:EG13162" gene 543673..543876 /gene="tatE" /locus_tag="b0627" /gene_synonym="ECK0620" /gene_synonym="JW0622" /gene_synonym="ybeC" /db_xref="EcoGene:EG11305" CDS 543673..543876 /gene="tatE" /locus_tag="b0627" /gene_synonym="ECK0620" /gene_synonym="JW0622" /gene_synonym="ybeC" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="TatABCE protein translocation system subunit" /protein_id="AAC73728.1" /db_xref="GI:1786845" /db_xref="ASAP:ABE-0002153" /db_xref="UniProtKB/Swiss-Prot:P0A843" /db_xref="EcoGene:EG11305" /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN DDDAAAKKGADVDLQAEKLSHKE" gene complement(543977..544942) /gene="lipA" /locus_tag="b0628" /gene_synonym="ECK0621" /gene_synonym="JW0623" /gene_synonym="lip" /db_xref="EcoGene:EG11306" CDS complement(543977..544942) /gene="lipA" /locus_tag="b0628" /gene_synonym="ECK0621" /gene_synonym="JW0623" /gene_synonym="lip" /EC_number="2.8.1.-" /function="putative enzyme; Biosynthesis of cofactors, carriers: Lipoate" /note="lipoate synthesis, sulfur insertion?; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009107 - lipoate biosynthetic process" /codon_start=1 /transl_table=11 /product="lipoate synthase" /protein_id="AAC73729.1" /db_xref="GI:1786846" /db_xref="ASAP:ABE-0002155" /db_xref="UniProtKB/Swiss-Prot:P60716" /db_xref="EcoGene:EG11306" /translation="MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIK LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK" gene complement(545151..546104) /gene="ybeF" /locus_tag="b0629" /gene_synonym="ECK0622" /gene_synonym="JW0624" /db_xref="EcoGene:EG11594" CDS complement(545151..546104) /gene="ybeF" /locus_tag="b0629" /gene_synonym="ECK0622" /gene_synonym="JW0624" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC73730.2" /db_xref="GI:87081766" /db_xref="ASAP:ABE-0002158" /db_xref="UniProtKB/Swiss-Prot:P30979" /db_xref="EcoGene:EG11594" /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHK GIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF" gene complement(546363..547004) /gene="lipB" /locus_tag="b0630" /gene_synonym="cde" /gene_synonym="ECK0623" /gene_synonym="JW5089" /db_xref="EcoGene:EG11591" CDS complement(546363..547004) /gene="lipB" /locus_tag="b0630" /gene_synonym="cde" /gene_synonym="ECK0623" /gene_synonym="JW5089" /EC_number="2.3.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Lipoate" /note="protein of lipoate biosynthesis; GO_process: GO:0009107 - lipoate biosynthetic process" /codon_start=1 /transl_table=11 /product="octanoyltransferase; octanoyl-[ACP]:protein N-octanoyltransferase" /protein_id="AAC73731.2" /db_xref="GI:87081767" /db_xref="ASAP:ABE-0002160" /db_xref="UniProtKB/Swiss-Prot:P60720" /db_xref="EcoGene:EG11591" /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA" gene complement(547105..547368) /gene="ybeD" /locus_tag="b0631" /gene_synonym="ECK0624" /gene_synonym="JW0626" /db_xref="EcoGene:EG11592" CDS complement(547105..547368) /gene="ybeD" /locus_tag="b0631" /gene_synonym="ECK0624" /gene_synonym="JW0626" /codon_start=1 /transl_table=11 /product="UPF0250 family protein" /protein_id="AAC73732.1" /db_xref="GI:1786850" /db_xref="ASAP:ABE-0002162" /db_xref="UniProtKB/Swiss-Prot:P0A8J4" /db_xref="EcoGene:EG11592" /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL" gene complement(547478..548689) /gene="dacA" /locus_tag="b0632" /gene_synonym="ECK0625" /gene_synonym="JW0627" /gene_synonym="pfv" /db_xref="EcoGene:EG10201" CDS complement(547478..548689) /gene="dacA" /locus_tag="b0632" /gene_synonym="ECK0625" /gene_synonym="JW0627" /gene_synonym="pfv" /EC_number="3.4.16.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)" /protein_id="AAC73733.1" /db_xref="GI:1786851" /db_xref="ASAP:ABE-0002168" /db_xref="UniProtKB/Swiss-Prot:P0AEB2" /db_xref="EcoGene:EG10201" /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRM KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID YIKLMFHHWFG" gene complement(548828..549916) /gene="rlpA" /locus_tag="b0633" /gene_synonym="ECK0626" /gene_synonym="JW0628" /db_xref="EcoGene:EG10854" CDS complement(548828..549916) /gene="rlpA" /locus_tag="b0633" /gene_synonym="ECK0626" /gene_synonym="JW0628" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /note="a minor lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="septal ring protein, suppressor of prc, minor lipoprotein" /protein_id="AAC73734.1" /db_xref="GI:1786852" /db_xref="ASAP:ABE-0002171" /db_xref="UniProtKB/Swiss-Prot:P10100" /db_xref="EcoGene:EG10854" /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA MVTPQAVSQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP FASKAEASTLQQRLQTEAQLQSFITTAQ" gene complement(549927..551039) /gene="mrdB" /locus_tag="b0634" /gene_synonym="ECK0627" /gene_synonym="JW0629" /gene_synonym="rodA" /db_xref="EcoGene:EG10607" CDS complement(549927..551039) /gene="mrdB" /locus_tag="b0634" /gene_synonym="ECK0627" /gene_synonym="JW0629" /gene_synonym="rodA" /function="phenotype; Cell division" /note="rod shape-determining membrane protein; sensitivity to radiation and drugs; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cell wall shape-determining protein" /protein_id="AAC73735.1" /db_xref="GI:1786853" /db_xref="ASAP:ABE-0002173" /db_xref="UniProtKB/Swiss-Prot:P0ABG7" /db_xref="EcoGene:EG10607" /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV" gene complement(551042..552943) /gene="mrdA" /locus_tag="b0635" /gene_synonym="ECK0628" /gene_synonym="JW0630" /gene_synonym="pbpA" /db_xref="EcoGene:EG10606" CDS complement(551042..552943) /gene="mrdA" /locus_tag="b0635" /gene_synonym="ECK0628" /gene_synonym="JW0630" /gene_synonym="pbpA" /function="enzyme; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 3533535" /note="cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2, transpeptidase involved in peptidoglycan synthesis" /protein_id="AAC73736.1" /db_xref="GI:1786854" /db_xref="ASAP:ABE-0002178" /db_xref="UniProtKB/Swiss-Prot:P0AD65" /db_xref="EcoGene:EG10606" /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH SGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN PAVAAAEDH" gene complement(552974..553441) /gene="rlmH" /locus_tag="b0636" /gene_synonym="ECK0629" /gene_synonym="JW0631" /gene_synonym="ybeA" /db_xref="EcoGene:EG11254" CDS complement(552974..553441) /gene="rlmH" /locus_tag="b0636" /gene_synonym="ECK0629" /gene_synonym="JW0631" /gene_synonym="ybeA" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent" /protein_id="AAC73737.1" /db_xref="GI:1786855" /db_xref="ASAP:ABE-0002180" /db_xref="UniProtKB/Swiss-Prot:P0A8I8" /db_xref="EcoGene:EG11254" /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE" gene complement(553445..553762) /gene="rsfS" /locus_tag="b0637" /gene_synonym="ECK0630" /gene_synonym="JW5090" /gene_synonym="rsfA" /gene_synonym="slm3" /gene_synonym="ybeB" /db_xref="EcoGene:EG11255" CDS complement(553445..553762) /gene="rsfS" /locus_tag="b0637" /gene_synonym="ECK0630" /gene_synonym="JW5090" /gene_synonym="rsfA" /gene_synonym="slm3" /gene_synonym="ybeB" /function="factor; Ribosomes - maturation and modification" /codon_start=1 /transl_table=11 /product="ribosomal silencing factor" /protein_id="AAC73738.2" /db_xref="GI:87081768" /db_xref="ASAP:ABE-0002183" /db_xref="UniProtKB/Swiss-Prot:P0AAT6" /db_xref="EcoGene:EG11255" /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK LWS" gene complement(554022..554633) /gene="cobC" /locus_tag="b0638" /gene_synonym="ECK0631" /gene_synonym="JW0633" /gene_synonym="phpB" /db_xref="EcoGene:EG13240" CDS complement(554022..554633) /gene="cobC" /locus_tag="b0638" /gene_synonym="ECK0631" /gene_synonym="JW0633" /gene_synonym="phpB" /function="putative regulator; Biosynthesis of cofactors, carriers: Cobalamin" /note="homolog of Salmonella cobC, a phosphohistidine protein" /codon_start=1 /transl_table=11 /product="putative alpha-ribazole-5'-P phosphatase" /protein_id="AAC73739.1" /db_xref="GI:1786857" /db_xref="ASAP:ABE-0002185" /db_xref="UniProtKB/Swiss-Prot:P52086" /db_xref="EcoGene:EG13240" /translation="MRLWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHG VSFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAEN YSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARL IGMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA" gene complement(554657..555298) /gene="nadD" /locus_tag="b0639" /gene_synonym="ECK0632" /gene_synonym="fusB" /gene_synonym="JW0634" /gene_synonym="ybeN" /db_xref="EcoGene:EG13241" CDS complement(554657..555298) /gene="nadD" /locus_tag="b0639" /gene_synonym="ECK0632" /gene_synonym="fusB" /gene_synonym="JW0634" /gene_synonym="ybeN" /EC_number="2.7.7.18" /note="GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent" /protein_id="AAC73740.1" /db_xref="GI:1786858" /db_xref="ASAP:ABE-0002187" /db_xref="UniProtKB/Swiss-Prot:P0A752" /db_xref="EcoGene:EG13241" /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR" gene complement(555300..556331) /gene="holA" /locus_tag="b0640" /gene_synonym="ECK0633" /gene_synonym="JW0635" /db_xref="EcoGene:EG11412" CDS complement(555300..556331) /gene="holA" /locus_tag="b0640" /gene_synonym="ECK0633" /gene_synonym="JW0635" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 1400251,8505303" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III, delta subunit" /protein_id="AAC73741.1" /db_xref="GI:1786859" /db_xref="ASAP:ABE-0002192" /db_xref="UniProtKB/Swiss-Prot:P28630" /db_xref="EcoGene:EG11412" /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK PLADVFIDG" gene complement(556331..556912) /gene="lptE" /locus_tag="b0641" /gene_synonym="ECK0634" /gene_synonym="JW0636" /gene_synonym="rlpB" /db_xref="EcoGene:EG10855" CDS complement(556331..556912) /gene="lptE" /locus_tag="b0641" /gene_synonym="ECK0634" /gene_synonym="JW0636" /gene_synonym="rlpB" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /note="a minor lipoprotein; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042158 - lipoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="LPS assembly OM complex LptDE, lipoprotein component" /protein_id="AAC73742.1" /db_xref="GI:1786860" /db_xref="ASAP:ABE-0002194" /db_xref="UniProtKB/Swiss-Prot:P0ADC1" /db_xref="EcoGene:EG10855" /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN" gene complement(556927..559509) /gene="leuS" /locus_tag="b0642" /gene_synonym="ECK0635" /gene_synonym="JW0637" /db_xref="EcoGene:EG10532" CDS complement(556927..559509) /gene="leuS" /locus_tag="b0642" /gene_synonym="ECK0635" /gene_synonym="JW0637" /EC_number="6.1.1.4" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 3320963" /note="leucine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="AAC73743.1" /db_xref="GI:1786861" /db_xref="ASAP:ABE-0002196" /db_xref="UniProtKB/Swiss-Prot:P07813" /db_xref="EcoGene:EG10532" /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKT MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPQY KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA KGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN LVVG" gene 559744..560226 /gene="ybeL" /locus_tag="b0643" /gene_synonym="ECK0636" /gene_synonym="JW0638" /db_xref="EcoGene:EG12851" CDS 559744..560226 /gene="ybeL" /locus_tag="b0643" /gene_synonym="ECK0636" /gene_synonym="JW0638" /function="phenotype; Not classified" /note="putative alpha helical protein" /codon_start=1 /transl_table=11 /product="DUF1451 family protein" /protein_id="AAC73744.1" /db_xref="GI:1786863" /db_xref="ASAP:ABE-0002199" /db_xref="UniProtKB/Swiss-Prot:P0AAT9" /db_xref="EcoGene:EG12851" /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP " gene complement(560296..561273) /gene="ybeQ" /locus_tag="b0644" /gene_synonym="ECK0637" /gene_synonym="JW5091" /db_xref="EcoGene:EG13647" CDS complement(560296..561273) /gene="ybeQ" /locus_tag="b0644" /gene_synonym="ECK0637" /gene_synonym="JW5091" /codon_start=1 /transl_table=11 /product="Sel1 family TPR-like repeat protein" /protein_id="AAC73745.2" /db_xref="GI:87081769" /db_xref="ASAP:ABE-0002201" /db_xref="UniProtKB/Swiss-Prot:P77234" /db_xref="EcoGene:EG13647" /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASN ALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL" gene 561437..562144 /gene="ybeR" /locus_tag="b0645" /gene_synonym="ECK0638" /gene_synonym="JW0640" /db_xref="EcoGene:EG13648" CDS 561437..562144 /gene="ybeR" /locus_tag="b0645" /gene_synonym="ECK0638" /gene_synonym="JW0640" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC73746.1" /db_xref="GI:1786865" /db_xref="ASAP:ABE-0002208" /db_xref="UniProtKB/Swiss-Prot:P77627" /db_xref="EcoGene:EG13648" /translation="MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS WGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP LAYYSACPETLKDMSDL" gene 562141..563568 /gene="djlB" /locus_tag="b0646" /gene_synonym="ECK0639" /gene_synonym="JW0641" /gene_synonym="ybeS" /db_xref="EcoGene:EG13649" CDS 562141..563568 /gene="djlB" /locus_tag="b0646" /gene_synonym="ECK0639" /gene_synonym="JW0641" /gene_synonym="ybeS" /function="putative factor; Chaperones" /note="putative enzyme of polynucleotide modification; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative HscC co-chaperone, uncharacterized J domain-containing protein" /protein_id="AAC73747.1" /db_xref="GI:1786866" /db_xref="ASAP:ABE-0002210" /db_xref="UniProtKB/Swiss-Prot:P77381" /db_xref="EcoGene:EG13649" /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENTGEIDEEELESFLYAI AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPQWLTLYLAQHRAVIIPDDAKL HRNLLRWYSAGRLDIPELLDYAQSWRETEPDNEDAPYYEYAQRVYCGEGESLLAELCD YWREYPSTQADALMLQWCRQHRVDYYPLLVMMIEARDLVNDQGKPLLYVPGDSARTRF HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHTLWPLYLVAKQLVQACQPT EESLMPIVSRLDAENRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC LGIIKIIFYIFIFAGLIGKILHLFG" gene complement(563578..564132) /gene="ybeT" /locus_tag="b0647" /gene_synonym="ECK0640" /gene_synonym="JW0642" /db_xref="EcoGene:EG13650" CDS complement(563578..564132) /gene="ybeT" /locus_tag="b0647" /gene_synonym="ECK0640" /gene_synonym="JW0642" /codon_start=1 /transl_table=11 /product="Sel1 family TPR-like repeat protein" /protein_id="AAC73748.1" /db_xref="GI:1786867" /db_xref="ASAP:ABE-0002213" /db_xref="UniProtKB/Swiss-Prot:P77296" /db_xref="EcoGene:EG13650" /translation="MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSP GSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ KWLKLTAKQHYKNAERLLAGLPAH" gene 564234..564941 /gene="ybeU" /locus_tag="b0648" /gene_synonym="ECK0641" /gene_synonym="JW0643" /db_xref="EcoGene:EG13651" CDS 564234..564941 /gene="ybeU" /locus_tag="b0648" /gene_synonym="ECK0641" /gene_synonym="JW0643" /function="putative enzyme; Not classified" /note="putative tRNA ligase" /codon_start=1 /transl_table=11 /product="DUF1266 family protein" /protein_id="AAC73749.1" /db_xref="GI:1786868" /db_xref="ASAP:ABE-0002220" /db_xref="UniProtKB/Swiss-Prot:P77427" /db_xref="EcoGene:EG13651" /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSS WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV AQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMH YFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQP LTVQSECPVTLKDVSDL" gene 564938..566389 /gene="djlC" /locus_tag="b0649" /gene_synonym="ECK0642" /gene_synonym="hscD" /gene_synonym="JW0644" /gene_synonym="ybeV" /db_xref="EcoGene:EG13652" CDS 564938..566389 /gene="djlC" /locus_tag="b0649" /gene_synonym="ECK0642" /gene_synonym="hscD" /gene_synonym="JW0644" /gene_synonym="ybeV" /function="factor; Chaperones" /codon_start=1 /transl_table=11 /product="J domain-containing HscC co-chaperone; Hsc56" /protein_id="AAC73750.1" /db_xref="GI:1786869" /db_xref="ASAP:ABE-0002222" /db_xref="UniProtKB/Swiss-Prot:P77359" /db_xref="EcoGene:EG13652" /translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ AYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNT WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAI QAGDCFDFLSLLEYPIALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWLIPDDAKL HRKLLRWYSSVQTGMAELIPVAQQWQTEEPESEDARYYLCAQRLYCGEGESLLADLCA YWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQPLKYVPGESARTRL LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPFLDLYRVAEQVVL EAFPKQEMLARLNTRLEGGDAHPLEAIVTRMLLTKVKLEPEDEDVDEPTPENHEEKND EGEKPQSITSIIKISLTVLVIGYALGKIAMLFS" repeat_region 566411..566440 /note="REP57 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(566449..568119) /gene="hscC" /locus_tag="b0650" /gene_synonym="ECK0643" /gene_synonym="JW0645" /gene_synonym="ybeW" /db_xref="EcoGene:EG13653" CDS complement(566449..568119) /gene="hscC" /locus_tag="b0650" /gene_synonym="ECK0643" /gene_synonym="JW0645" /gene_synonym="ybeW" /function="putative enzyme; Not classified" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor" /protein_id="AAC73751.1" /db_xref="GI:1786870" /db_xref="ASAP:ABE-0002225" /db_xref="UniProtKB/Swiss-Prot:P77319" /db_xref="EcoGene:EG13653" /translation="MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRA DVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEE LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP" gene complement(568203..569138) /gene="rihA" /locus_tag="b0651" /gene_synonym="ECK0644" /gene_synonym="JW0646" /gene_synonym="ybeK" /db_xref="EcoGene:EG12701" CDS complement(568203..569138) /gene="rihA" /locus_tag="b0651" /gene_synonym="ECK0644" /gene_synonym="JW0646" /gene_synonym="ybeK" /EC_number="3.2.2.-" /function="orf; Not classified" /note="GO_process: GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="ribonucleoside hydrolase 1" /protein_id="AAC73752.1" /db_xref="GI:1786871" /db_xref="ASAP:ABE-0002227" /db_xref="UniProtKB/Swiss-Prot:P41409" /db_xref="EcoGene:EG12701" /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAE LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVV DYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA" gene complement(569256..569981) /gene="gltL" /locus_tag="b0652" /gene_synonym="ECK0645" /gene_synonym="JW0647" /db_xref="EcoGene:EG12663" CDS complement(569256..569981) /gene="gltL" /locus_tag="b0652" /gene_synonym="ECK0645" /gene_synonym="JW0647" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding protein of glutamate/aspartate transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006532 - aspartate biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate/aspartate ABC transporter ATPase" /protein_id="AAC73753.1" /db_xref="GI:1786872" /db_xref="ASAP:ABE-0002232" /db_xref="UniProtKB/Swiss-Prot:P0AAG3" /db_xref="EcoGene:EG12663" /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS PKDAFFDDPKSDRAKDFLAKILH" gene complement(569981..570655) /gene="gltK" /locus_tag="b0653" /gene_synonym="ECK0646" /gene_synonym="JW0648" /db_xref="EcoGene:EG12662" CDS complement(569981..570655) /gene="gltK" /locus_tag="b0653" /gene_synonym="ECK0646" /gene_synonym="JW0648" /function="transport; Transport of small molecules: Amino acids, amines" /note="glutamate/aspartate transport system permease; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006532 - aspartate biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate/aspartate ABC transporter permease" /protein_id="AAC73754.1" /db_xref="GI:1786873" /db_xref="ASAP:ABE-0002234" /db_xref="UniProtKB/Swiss-Prot:P0AER5" /db_xref="EcoGene:EG12662" /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM RLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY LKRRTA" gene complement(570655..571395) /gene="gltJ" /locus_tag="b0654" /gene_synonym="ECK0647" /gene_synonym="JW0649" /db_xref="EcoGene:EG12661" CDS complement(570655..571395) /gene="gltJ" /locus_tag="b0654" /gene_synonym="ECK0647" /gene_synonym="JW0649" /function="transport; Transport of small molecules: Amino acids, amines" /note="glutamate/aspartate transport system permease; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006532 - aspartate biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate/aspartate ABC transporter permease" /protein_id="AAC73755.1" /db_xref="GI:1786874" /db_xref="ASAP:ABE-0002239" /db_xref="UniProtKB/Swiss-Prot:P0AER3" /db_xref="EcoGene:EG12661" /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA YVLINAFIMLVMTLVERKVRLPGNMGGK" repeat_region 571476..571500 /note="REP58 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(571565..572473) /gene="gltI" /locus_tag="b0655" /gene_synonym="ECK0648" /gene_synonym="JW5092" /gene_synonym="ybeJ" /gene_synonym="yzzK" /db_xref="EcoGene:EG12700" CDS complement(571565..572473) /gene="gltI" /locus_tag="b0655" /gene_synonym="ECK0648" /gene_synonym="JW5092" /gene_synonym="ybeJ" /gene_synonym="yzzK" /function="transport; Amino acids" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006537 - glutamate biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate/aspartate periplasmic binding protein" /protein_id="AAC73756.1" /db_xref="GI:1786876" /db_xref="ASAP:ABE-0002241" /db_xref="UniProtKB/Swiss-Prot:P37902" /db_xref="EcoGene:EG12700" /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTS GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK PDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP KNLNMNFELSDEMKALFKEPNDKALN" mobile_element complement(572577..573771) /mobile_element_type="insertion sequence:IS5D" gene complement(572723..573739) /gene="insH1" /locus_tag="b0656" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(572723..573739) /gene="insH1" /locus_tag="b0656" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC73757.1" /db_xref="GI:1786877" /db_xref="ASAP:ABE-0002246" /db_xref="UniProtKB/Swiss-Prot:P0CE51" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" repeat_region 573990..574023 /note="REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(574069..575607) /gene="lnt" /locus_tag="b0657" /gene_synonym="cutE" /gene_synonym="ECK0649" /gene_synonym="JW0654" /db_xref="EcoGene:EG10168" CDS complement(574069..575607) /gene="lnt" /locus_tag="b0657" /gene_synonym="cutE" /gene_synonym="ECK0649" /gene_synonym="JW0654" /EC_number="2.3.1.-" /function="enzyme; Transport of small molecules: Cations" /note="apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042158 - lipoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="AAC73758.1" /db_xref="GI:1786878" /db_xref="ASAP:ABE-0002250" /db_xref="UniProtKB/Swiss-Prot:P23930" /db_xref="EcoGene:EG10168" /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP EKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIIL GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR QRRK" gene complement(575632..576510) /gene="ybeX" /locus_tag="b0658" /gene_synonym="corC" /gene_synonym="ECK0650" /gene_synonym="JW0655" /db_xref="EcoGene:EG13654" CDS complement(575632..576510) /gene="ybeX" /locus_tag="b0658" /gene_synonym="corC" /gene_synonym="ECK0650" /gene_synonym="JW0655" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative ion transport" /protein_id="AAC73759.1" /db_xref="GI:1786879" /db_xref="ASAP:ABE-0002252" /db_xref="UniProtKB/Swiss-Prot:P0AE78" /db_xref="EcoGene:EG13654" /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ VHVKIPDDSPQPKLDE" gene complement(576600..577067) /gene="ybeY" /locus_tag="b0659" /gene_synonym="ECK0651" /gene_synonym="JW0656" /db_xref="EcoGene:EG13655" CDS complement(576600..577067) /gene="ybeY" /locus_tag="b0659" /gene_synonym="ECK0651" /gene_synonym="JW0656" /codon_start=1 /transl_table=11 /product="ssRNA-specific endoribonuclease; 16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R; rRNA transcription antitermination factor" /protein_id="AAC73760.1" /db_xref="GI:1786880" /db_xref="ASAP:ABE-0002255" /db_xref="UniProtKB/Swiss-Prot:P0A898" /db_xref="EcoGene:EG13655" /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE" gene complement(577064..578104) /gene="ybeZ" /locus_tag="b0660" /gene_synonym="ECK0652" /gene_synonym="JW0657" /gene_synonym="phoL" /db_xref="EcoGene:EG13656" CDS complement(577064..578104) /gene="ybeZ" /locus_tag="b0660" /gene_synonym="ECK0652" /gene_synonym="JW0657" /gene_synonym="phoL" /note="putative ATP-binding protein in pho regulon" /codon_start=1 /transl_table=11 /product="heat shock protein, putative NTPase; PhoH-like protein" /protein_id="AAC73761.2" /db_xref="GI:145693103" /db_xref="ASAP:ABE-0002257" /db_xref="UniProtKB/Swiss-Prot:P0A9K3" /db_xref="EcoGene:EG13656" /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD NHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESV PEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL AAERKREEQEQK" gene complement(578257..579681) /gene="miaB" /locus_tag="b0661" /gene_synonym="ECK0653" /gene_synonym="JW0658" /gene_synonym="yleA" /db_xref="EcoGene:EG13657" CDS complement(578257..579681) /gene="miaB" /locus_tag="b0661" /gene_synonym="ECK0653" /gene_synonym="JW0658" /gene_synonym="yleA" /function="enzyme; tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA-i(6)A37 methylthiotransferase" /protein_id="AAC73762.1" /db_xref="GI:1786882" /db_xref="ASAP:ABE-0002260" /db_xref="UniProtKB/Swiss-Prot:P0AEI1" /db_xref="EcoGene:EG13657" /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSF ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV AETPESVIARTRKENDLGVGYYQP" gene 579827..581002 /gene="ubiF" /locus_tag="b0662" /gene_synonym="ECK0654" /gene_synonym="JW0659" /gene_synonym="yleB" /db_xref="EcoGene:EG13658" CDS 579827..581002 /gene="ubiF" /locus_tag="b0662" /gene_synonym="ECK0654" /gene_synonym="JW0659" /gene_synonym="yleB" /EC_number="1.14.13.-" /codon_start=1 /transl_table=11 /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase" /protein_id="AAC73763.1" /db_xref="GI:1786883" /db_xref="ASAP:ABE-0002265" /db_xref="UniProtKB/Swiss-Prot:P75728" /db_xref="EcoGene:EG13658" /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVA DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKL VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFMRNLGLMAAERAGVLKRQALKYALGL" repeat_region 581033..581103 /note="REP60 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(581156..581230) /gene="glnX" /locus_tag="b0664" /gene_synonym="ECK0655" /gene_synonym="glnVbeta" /gene_synonym="JWR0011" /gene_synonym="supE" /db_xref="EcoGene:EG30031" tRNA complement(581156..581230) /gene="glnX" /locus_tag="b0664" /gene_synonym="ECK0655" /gene_synonym="glnVbeta" /gene_synonym="JWR0011" /gene_synonym="supE" /product="tRNA-Gln" /note="anticodon: CUG" /db_xref="ASAP:ABE-0002272" /db_xref="EcoGene:EG30031" gene complement(581268..581342) /gene="glnV" /locus_tag="b0665" /gene_synonym="ECK0656" /gene_synonym="glnValpha" /gene_synonym="JWR0012" /gene_synonym="Su2" /gene_synonym="suII" /gene_synonym="supE" /db_xref="EcoGene:EG30029" tRNA complement(581268..581342) /gene="glnV" /locus_tag="b0665" /gene_synonym="ECK0656" /gene_synonym="glnValpha" /gene_synonym="JWR0012" /gene_synonym="Su2" /gene_synonym="suII" /gene_synonym="supE" /product="tRNA-Gln" /note="anticodon: CUG" /db_xref="ASAP:ABE-0002274" /db_xref="EcoGene:EG30029" gene complement(581390..581466) /gene="metU" /locus_tag="b0666" /gene_synonym="ECK0657" /gene_synonym="JWR0013" /gene_synonym="metTbeta" /db_xref="EcoGene:EG30059" tRNA complement(581390..581466) /gene="metU" /locus_tag="b0666" /gene_synonym="ECK0657" /gene_synonym="JWR0013" /gene_synonym="metTbeta" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0002276" /db_xref="EcoGene:EG30059" gene complement(581482..581556) /gene="glnW" /locus_tag="b0668" /gene_synonym="ECK0658" /gene_synonym="glnUbeta" /gene_synonym="JWR0014" /db_xref="EcoGene:EG30030" tRNA complement(581482..581556) /gene="glnW" /locus_tag="b0668" /gene_synonym="ECK0658" /gene_synonym="glnUbeta" /gene_synonym="JWR0014" /product="tRNA-Gln" /note="anticodon: UUG" /db_xref="ASAP:ABE-0002280" /db_xref="EcoGene:EG30030" gene complement(581591..581665) /gene="glnU" /locus_tag="b0670" /gene_synonym="ECK0659" /gene_synonym="glnUalpha" /gene_synonym="JWR0015" /gene_synonym="supB" /db_xref="EcoGene:EG30028" tRNA complement(581591..581665) /gene="glnU" /locus_tag="b0670" /gene_synonym="ECK0659" /gene_synonym="glnUalpha" /gene_synonym="JWR0015" /gene_synonym="supB" /product="tRNA-Gln" /note="anticodon: UUG" /db_xref="ASAP:ABE-0002284" /db_xref="EcoGene:EG30028" gene complement(581689..581773) /gene="leuW" /locus_tag="b0672" /gene_synonym="ECK0660" /gene_synonym="feeB" /gene_synonym="JWR0016" /db_xref="EcoGene:EG30052" tRNA complement(581689..581773) /gene="leuW" /locus_tag="b0672" /gene_synonym="ECK0660" /gene_synonym="feeB" /gene_synonym="JWR0016" /product="tRNA-Leu" /note="anticodon: CAA" /db_xref="ASAP:ABE-0002288" /db_xref="EcoGene:EG30052" gene complement(581783..581859) /gene="metT" /locus_tag="b0673" /gene_synonym="ECK0661" /gene_synonym="JWR0017" /gene_synonym="metTalpha" /db_xref="EcoGene:EG30058" tRNA complement(581783..581859) /gene="metT" /locus_tag="b0673" /gene_synonym="ECK0661" /gene_synonym="JWR0017" /gene_synonym="metTalpha" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0002290" /db_xref="EcoGene:EG30058" gene complement(582239..583903) /gene="asnB" /locus_tag="b0674" /gene_synonym="ECK0662" /gene_synonym="JW0660" /db_xref="EcoGene:EG10092" CDS complement(582239..583903) /gene="asnB" /locus_tag="b0674" /gene_synonym="ECK0662" /gene_synonym="JW0660" /EC_number="6.3.5.4" /function="enzyme; Amino acid biosynthesis: Asparagine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006529 - asparagine biosynthetic process" /codon_start=1 /transl_table=11 /product="asparagine synthetase B" /protein_id="AAC73768.1" /db_xref="GI:1786889" /db_xref="ASAP:ABE-0002292" /db_xref="UniProtKB/Swiss-Prot:P22106" /db_xref="EcoGene:EG10092" /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS EMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALED SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFEAYLPASVAWRQK EQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPL PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK" repeat_region 584151..584248 /note="RIP61 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(584300..585052) /gene="umpH" /locus_tag="b0675" /gene_synonym="ECK0663" /gene_synonym="JW0661" /gene_synonym="nagD" /db_xref="EcoGene:EG10634" CDS complement(584300..585052) /gene="umpH" /locus_tag="b0675" /gene_synonym="ECK0663" /gene_synonym="JW0661" /gene_synonym="nagD" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="N-acetylglucosamine metabolism; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="UMP phosphatase" /protein_id="AAC73769.1" /db_xref="GI:1786890" /db_xref="ASAP:ABE-0002296" /db_xref="UniProtKB/Swiss-Prot:P0AF24" /db_xref="EcoGene:EG10634" /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA GFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI" gene complement(585100..586320) /gene="nagC" /locus_tag="b0676" /gene_synonym="ECK0664" /gene_synonym="JW0662" /gene_synonym="nagR" /db_xref="EcoGene:EG10636" CDS complement(585100..586320) /gene="nagC" /locus_tag="b0676" /gene_synonym="ECK0664" /gene_synonym="JW0662" /gene_synonym="nagR" /function="regulator; Central intermediary metabolism: Amino sugars" /note="transcriptional repressor of nag (N-acetylglucosamine) operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0046349 - amino sugar biosynthetic process; GO_process: GO:0006350 - transcription; GO_process: GO:0009386 - translational attenuation" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-inducible nag divergent operon transcriptional repressor" /protein_id="AAC73770.1" /db_xref="GI:1786891" /db_xref="ASAP:ABE-0002299" /db_xref="UniProtKB/Swiss-Prot:P0AF20" /db_xref="EcoGene:EG10636" /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR AMLNGILLQHLLEN" gene complement(586329..587477) /gene="nagA" /locus_tag="b0677" /gene_synonym="ECK0665" /gene_synonym="JW0663" /db_xref="EcoGene:EG10632" CDS complement(586329..587477) /gene="nagA" /locus_tag="b0677" /gene_synonym="ECK0665" /gene_synonym="JW0663" /EC_number="3.5.1.25" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylglucosamine-6-phosphate deacetylase" /protein_id="AAC73771.1" /db_xref="GI:1786892" /db_xref="ASAP:ABE-0002301" /db_xref="UniProtKB/Swiss-Prot:P0AF18" /db_xref="EcoGene:EG10632" /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT SDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ" gene complement(587537..588337) /gene="nagB" /locus_tag="b0678" /gene_synonym="ECK0666" /gene_synonym="glmD" /gene_synonym="JW0664" /db_xref="EcoGene:EG10633" CDS complement(587537..588337) /gene="nagB" /locus_tag="b0678" /gene_synonym="ECK0666" /gene_synonym="glmD" /gene_synonym="JW0664" /EC_number="3.5.99.6" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate deaminase" /protein_id="AAC73772.1" /db_xref="GI:1786893" /db_xref="ASAP:ABE-0002304" /db_xref="UniProtKB/Swiss-Prot:P0A759" /db_xref="EcoGene:EG10633" /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL" gene 588670..590616 /gene="nagE" /locus_tag="b0679" /gene_synonym="ECK0667" /gene_synonym="JW0665" /gene_synonym="pstN" /gene_synonym="ptsN" /db_xref="EcoGene:EG10635" CDS 588670..590616 /gene="nagE" /locus_tag="b0679" /gene_synonym="ECK0667" /gene_synonym="JW0665" /gene_synonym="pstN" /gene_synonym="ptsN" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Amino acids, amines" /note="PTS system, N-acetylglucosamine-specific enzyme IIABC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components" /protein_id="AAC73773.1" /db_xref="GI:1786894" /db_xref="ASAP:ABE-0002312" /db_xref="UniProtKB/Swiss-Prot:P09323" /db_xref="EcoGene:EG10635" /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS QNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQL ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI VGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGD VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD FSGLIIKAQGHIVAGQTPLYEIKK" repeat_region 590623..590658 /note="REP62 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 590819..592483 /gene="glnS" /locus_tag="b0680" /gene_synonym="ECK0668" /gene_synonym="JW0666" /db_xref="EcoGene:EG10390" CDS 590819..592483 /gene="glnS" /locus_tag="b0680" /gene_synonym="ECK0668" /gene_synonym="JW0666" /EC_number="6.1.1.18" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="glutamine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="AAC73774.1" /db_xref="GI:1786895" /db_xref="ASAP:ABE-0002317" /db_xref="UniProtKB/Swiss-Prot:P00962" /db_xref="EcoGene:EG10390" /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE" repeat_region 592496..592660 /note="RIP63 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site" gene 593060..594466 /gene="chiP" /locus_tag="b0681" /gene_synonym="ECK0669" /gene_synonym="JW0667" /gene_synonym="ybfM" /db_xref="EcoGene:EG13659" CDS 593060..594466 /gene="chiP" /locus_tag="b0681" /gene_synonym="ECK0669" /gene_synonym="JW0667" /gene_synonym="ybfM" /codon_start=1 /transl_table=11 /product="chitoporin, uptake of chitosugars" /protein_id="AAC73775.1" /db_xref="GI:1786897" /db_xref="ASAP:ABE-0002323" /db_xref="UniProtKB/Swiss-Prot:P75733" /db_xref="EcoGene:EG13659" /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAEN GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV DYLHSFGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYAS SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI FQDERDVKFMVIAPFTIF" gene 594516..594842 /gene="chiQ" /locus_tag="b0682" /gene_synonym="ECK0670" /gene_synonym="JW0668" /gene_synonym="ybfN" /db_xref="EcoGene:EG13660" CDS 594516..594842 /gene="chiQ" /locus_tag="b0682" /gene_synonym="ECK0670" /gene_synonym="JW0668" /gene_synonym="ybfN" /codon_start=1 /transl_table=11 /product="chitosugar-induced verified lipoprotein" /protein_id="AAC73776.1" /db_xref="GI:1786898" /db_xref="ASAP:ABE-0002325" /db_xref="UniProtKB/Swiss-Prot:P75734" /db_xref="EcoGene:EG13660" /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP EKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE IRSNNK" gene complement(594926..595372) /gene="fur" /locus_tag="b0683" /gene_synonym="ECK0671" /gene_synonym="JW0669" /db_xref="EcoGene:EG10359" CDS complement(594926..595372) /gene="fur" /locus_tag="b0683" /gene_synonym="ECK0671" /gene_synonym="JW0669" /function="regulator; Global regulatory functions" /note="negative regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="ferric iron uptake regulon transcriptional repressor; autorepressor" /protein_id="AAC73777.1" /db_xref="GI:1786899" /db_xref="ASAP:ABE-0002327" /db_xref="UniProtKB/Swiss-Prot:P0A9A9" /db_xref="EcoGene:EG10359" /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK" gene complement(595365..595451) /gene="uof" /locus_tag="b4637" /gene_synonym="ECK4461" /db_xref="EcoGene:EG14465" CDS complement(595365..595451) /gene="uof" /locus_tag="b4637" /gene_synonym="ECK4461" /codon_start=1 /transl_table=11 /product="ryhB-regulated fur leader peptide" /protein_id="ABV59574.1" /db_xref="GI:157672246" /db_xref="UniProtKB/Swiss-Prot:A8DYP9" /db_xref="EcoGene:EG14465" /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD" repeat_region 595634..595666 /note="REP64 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(595661..596191) /gene="fldA" /locus_tag="b0684" /gene_synonym="ECK0672" /gene_synonym="JW0671" /db_xref="EcoGene:EG10318" CDS complement(595661..596191) /gene="fldA" /locus_tag="b0684" /gene_synonym="ECK0672" /gene_synonym="JW0671" /function="enzyme; Energy metabolism, carbon: Electron transport" /codon_start=1 /transl_table=11 /product="flavodoxin 1" /protein_id="AAC73778.1" /db_xref="GI:1786900" /db_xref="ASAP:ABE-0002332" /db_xref="UniProtKB/Swiss-Prot:P61949" /db_xref="EcoGene:EG10318" /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW VKQISEELHLDEILNA" gene complement(596331..596624) /gene="ybfE" /locus_tag="b0685" /gene_synonym="ECK0673" /gene_synonym="JW5816" /db_xref="EcoGene:EG11775" CDS complement(596331..596624) /gene="ybfE" /locus_tag="b0685" /gene_synonym="ECK0673" /gene_synonym="JW5816" /note="GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="LexA-regulated protein, CopB family" /protein_id="AAC73779.2" /db_xref="GI:87081770" /db_xref="ASAP:ABE-0002335" /db_xref="UniProtKB/Swiss-Prot:P0AAU7" /db_xref="EcoGene:EG11775" /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR DKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV" gene complement(596764..597528) /gene="ybfF" /locus_tag="b0686" /gene_synonym="ECK0674" /gene_synonym="JW0673" /db_xref="EcoGene:EG11776" CDS complement(596764..597528) /gene="ybfF" /locus_tag="b0686" /gene_synonym="ECK0674" /gene_synonym="JW0673" /codon_start=1 /transl_table=11 /product="acyl-CoA esterase" /protein_id="AAC73780.1" /db_xref="GI:1786902" /db_xref="ASAP:ABE-0002337" /db_xref="UniProtKB/Swiss-Prot:P75736" /db_xref="EcoGene:EG11776" /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA SDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND" gene 597713..598258 /gene="seqA" /locus_tag="b0687" /gene_synonym="ECK0675" /gene_synonym="hsm-1" /gene_synonym="JW0674" /db_xref="EcoGene:EG12197" CDS 597713..598258 /gene="seqA" /locus_tag="b0687" /gene_synonym="ECK0675" /gene_synonym="hsm-1" /gene_synonym="JW0674" /function="regulator; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 7553853" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="negative modulator of initiation of replication" /protein_id="AAC73781.1" /db_xref="GI:1786903" /db_xref="ASAP:ABE-0002343" /db_xref="UniProtKB/Swiss-Prot:P0AFY8" /db_xref="EcoGene:EG12197" /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI EHIMQSMQFPAELIEKVCGTI" gene 598284..599924 /gene="pgm" /locus_tag="b0688" /gene_synonym="blu" /gene_synonym="ECK0676" /gene_synonym="JW0675" /gene_synonym="pgmA" /db_xref="EcoGene:EG12144" CDS 598284..599924 /gene="pgm" /locus_tag="b0688" /gene_synonym="blu" /gene_synonym="ECK0676" /gene_synonym="JW0675" /gene_synonym="pgmA" /EC_number="5.4.2.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006006 - glucose metabolic process" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /protein_id="AAC73782.1" /db_xref="GI:1786904" /db_xref="ASAP:ABE-0002345" /db_xref="UniProtKB/Swiss-Prot:P36938" /db_xref="EcoGene:EG12144" /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA" repeat_region 599990..600087 /note="RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 600138..600632 /gene="ybfP" /locus_tag="b0689" /gene_synonym="ECK0677" /gene_synonym="JW0676" /db_xref="EcoGene:EG14158" CDS 600138..600632 /gene="ybfP" /locus_tag="b0689" /gene_synonym="ECK0677" /gene_synonym="JW0676" /function="putative enzyme; Not classified" /note="putative pectinase" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC73783.1" /db_xref="GI:1786905" /db_xref="ASAP:ABE-0002350" /db_xref="UniProtKB/Swiss-Prot:P75737" /db_xref="EcoGene:EG14158" /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR GLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA INTH" gene complement(600673..601323) /gene="ybfG" /locus_tag="b0691" /gene_synonym="ECK0678" /gene_synonym="JW5094" /gene_synonym="ybfH" /pseudo /db_xref="EcoGene:EG11777" CDS complement(600673..601323) /gene="ybfG" /locus_tag="b0691" /gene_synonym="ECK0678" /gene_synonym="JW5094" /gene_synonym="ybfH" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002352" /db_xref="ASAP:ABE-0002355" /db_xref="UniProtKB/Swiss-Prot:P37003" /db_xref="EcoGene:EG11777" gene complement(601447..601596) /gene="ybfI" /locus_tag="b4636" /gene_synonym="ECK4436" /pseudo /db_xref="EcoGene:EG12390" CDS complement(601447..601596) /gene="ybfI" /locus_tag="b4636" /gene_synonym="ECK4436" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P39901" /db_xref="EcoGene:EG12390" gene complement(601672..602991) /gene="potE" /locus_tag="b0692" /gene_synonym="ECK0680" /gene_synonym="JW0679" /db_xref="EcoGene:EG10753" CDS complement(601672..602991) /gene="potE" /locus_tag="b0692" /gene_synonym="ECK0680" /gene_synonym="JW0679" /function="transport; Transport of small molecules: Amino acids, amines" /note="putrescine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015496 - putrescine:ornithine antiporter activity; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="putrescine/proton symporter: putrescine/ornithine antiporter" /protein_id="AAC73786.1" /db_xref="GI:1786908" /db_xref="ASAP:ABE-0002360" /db_xref="UniProtKB/Swiss-Prot:P0AAF1" /db_xref="EcoGene:EG10753" /translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIP VVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVEN PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG" gene complement(602988..605186) /gene="speF" /locus_tag="b0693" /gene_synonym="ECK0681" /gene_synonym="JW0680" /db_xref="EcoGene:EG10964" CDS complement(602988..605186) /gene="speF" /locus_tag="b0693" /gene_synonym="ECK0681" /gene_synonym="JW0680" /EC_number="4.1.1.17" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="ornithine decarboxylase isozyme, inducible" /protein_id="AAC73787.1" /db_xref="GI:1786909" /db_xref="ASAP:ABE-0002362" /db_xref="UniProtKB/Swiss-Prot:P24169" /db_xref="EcoGene:EG10964" /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT CGKLDEIDATGYGIPVFIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASH YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLC NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR AKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH ASTSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRV SMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL" gene 605309..605566 /gene="ybfK" /locus_tag="b4590" /gene_synonym="ECK4400" /db_xref="EcoGene:EG12869" CDS 605309..605566 /gene="ybfK" /locus_tag="b4590" /gene_synonym="ECK4400" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABP93437.1" /db_xref="GI:145693104" /db_xref="UniProtKB/Swiss-Prot:P46121" /db_xref="EcoGene:EG12869" /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS" gene complement(605782..606459) /gene="kdpE" /locus_tag="b0694" /gene_synonym="ECK0682" /gene_synonym="JW5096" /db_xref="EcoGene:EG10517" CDS complement(605782..606459) /gene="kdpE" /locus_tag="b0694" /gene_synonym="ECK0682" /gene_synonym="JW5096" /function="regulator; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 1630317" /note="regulator of kdp operon (transcriptional effector); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with KdpD" /protein_id="AAC73788.1" /db_xref="GI:1786911" /db_xref="ASAP:ABE-0002366" /db_xref="UniProtKB/Swiss-Prot:P21866" /db_xref="EcoGene:EG10517" /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATR KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP FGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG IGYRFML" gene complement(606456..609140) /gene="kdpD" /locus_tag="b0695" /gene_synonym="ECK0683" /gene_synonym="JW0683" /gene_synonym="kac" /db_xref="EcoGene:EG10516" CDS complement(606456..609140) /gene="kdpD" /locus_tag="b0695" /gene_synonym="ECK0683" /gene_synonym="JW0683" /gene_synonym="kac" /function="enzyme; Global regulatory functions" /note="sensor for high-affinity potassium transport system; sensory histidine kinase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein" /protein_id="AAC73789.1" /db_xref="GI:1786912" /db_xref="ASAP:ABE-0002368" /db_xref="UniProtKB/Swiss-Prot:P21865" /db_xref="EcoGene:EG10516" /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE AQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARR PALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDNRSFK DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR EQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQG MTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM" gene complement(609133..609705) /gene="kdpC" /locus_tag="b0696" /gene_synonym="ECK0684" /gene_synonym="JW0684" /gene_synonym="kac" /db_xref="EcoGene:EG10515" CDS complement(609133..609705) /gene="kdpC" /locus_tag="b0696" /gene_synonym="ECK0684" /gene_synonym="JW0684" /gene_synonym="kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /note="high-affinity potassium transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit C" /protein_id="AAC73790.1" /db_xref="GI:1786913" /db_xref="ASAP:ABE-0002374" /db_xref="UniProtKB/Swiss-Prot:P03961" /db_xref="EcoGene:EG10515" /translation="MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIR EGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARV AALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIA KYSQQPLVKYIGQPVVNIVELNLALDKLDE" gene complement(609714..611762) /gene="kdpB" /locus_tag="b0697" /gene_synonym="ECK0685" /gene_synonym="JW0685" /gene_synonym="kac" /db_xref="EcoGene:EG10514" CDS complement(609714..611762) /gene="kdpB" /locus_tag="b0697" /gene_synonym="ECK0685" /gene_synonym="JW0685" /gene_synonym="kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /note="ATPase of high-affinity potassium transport system, B chain; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit B" /protein_id="AAC73791.1" /db_xref="GI:1786914" /db_xref="ASAP:ABE-0002376" /db_xref="UniProtKB/Swiss-Prot:P03960" /db_xref="EcoGene:EG10514" /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL LTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKK TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM IRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA EGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK QMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFN ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV " gene complement(611785..613458) /gene="kdpA" /locus_tag="b0698" /gene_synonym="ECK0686" /gene_synonym="JW0686" /gene_synonym="kac" /db_xref="EcoGene:EG10513" CDS complement(611785..613458) /gene="kdpA" /locus_tag="b0698" /gene_synonym="ECK0686" /gene_synonym="JW0686" /gene_synonym="kac" /EC_number="3.6.3.12" /function="enzyme; Transport of small molecules: Cations" /note="ATPase of high-affinity potassium transport system, A chain; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" /codon_start=1 /transl_table=11 /product="potassium translocating ATPase, subunit A" /protein_id="AAC73792.1" /db_xref="GI:1786915" /db_xref="ASAP:ABE-0002381" /db_xref="UniProtKB/Swiss-Prot:P03959" /db_xref="EcoGene:EG10513" /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVER VLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSM STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGD RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSL FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV SKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS" gene complement(613458..613547) /gene="kdpF" /locus_tag="b4513" /gene_synonym="ECK0687" /gene_synonym="JW0687" /db_xref="EcoGene:EG12126" CDS complement(613458..613547) /gene="kdpF" /locus_tag="b4513" /gene_synonym="ECK0687" /gene_synonym="JW0687" /note="GO_component: GO:0031225 - anchored to membrane" /codon_start=1 /transl_table=11 /product="potassium ion accessory transporter subunit" /protein_id="ABD18643.1" /db_xref="GI:87081773" /db_xref="ASAP:ABE-0285034" /db_xref="UniProtKB/Swiss-Prot:P36937" /db_xref="EcoGene:EG12126" /translation="MSAGVITGVLLVFLLLGYLVYALINAEAF" gene 613860..614066 /gene="ybfA" /locus_tag="b0699" /gene_synonym="ECK0688" /gene_synonym="JW0688" /db_xref="EcoGene:EG11521" CDS 613860..614066 /gene="ybfA" /locus_tag="b0699" /gene_synonym="ECK0688" /gene_synonym="JW0688" /codon_start=1 /transl_table=11 /product="DUF2517 family protein" /protein_id="AAC73793.1" /db_xref="GI:1786916" /db_xref="ASAP:ABE-0002386" /db_xref="UniProtKB/Swiss-Prot:P0AAU2" /db_xref="EcoGene:EG11521" /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH RVWSKTSDKPVWMDQAEKATGDFY" gene 614309..618502 /gene="rhsC" /locus_tag="b0700" /gene_synonym="ECK0689" /gene_synonym="JW0689" /db_xref="EcoGene:EG10848" CDS 614309..618502 /gene="rhsC" /locus_tag="b0700" /gene_synonym="ECK0689" /gene_synonym="JW0689" /codon_start=1 /transl_table=11 /product="Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor" /protein_id="AAC73794.1" /db_xref="GI:1786917" /db_xref="ASAP:ABE-0002392" /db_xref="UniProtKB/Swiss-Prot:P16918" /db_xref="EcoGene:EG10848" /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVT SGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADI RLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQ ALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGR TQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDT LPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVR SFTYDDKYRGRMVAHRHTGRPEICYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDS LNRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVT GLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDITRY RYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQVTAVHRE EGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAI CTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLT GKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAERWQYDERGWLTDISHISEGHRVTV HYGYDSKGRLASEHLTVHHPQTNELLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYG SGWLSGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRD YTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYTTDPAGNRLPDPE LHPDSALSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLY HCDHRGLPLALISTEGTTAWYAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGT GERSGPDIWGNPFYHQYLCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAG RCDLVETDNSCVENCLKGKFKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKM KCSGNNIGRFIRFVFTGVM" gene 618502..618828 /gene="ybfB" /locus_tag="b0702" /gene_synonym="ECK0690" /gene_synonym="JW0691" /db_xref="EcoGene:EG11522" CDS 618502..618828 /gene="ybfB" /locus_tag="b0702" /gene_synonym="ECK0690" /gene_synonym="JW0691" /codon_start=1 /transl_table=11 /product="putative membrane protein" /protein_id="AAC73796.1" /db_xref="GI:1786919" /db_xref="ASAP:ABE-0002398" /db_xref="UniProtKB/Swiss-Prot:P0AAU5" /db_xref="EcoGene:EG11522" /translation="MKYIIFLFRAIWLALSLLILFFSMHRLSLLDSTRDVSELISLMS YGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMAIIIWLYFLSGGYIQWFVLS KRIINK" gene 618859..620379 /gene="rhsO" /locus_tag="b0703" /gene_synonym="ECK0691" /gene_synonym="JW0692" /gene_synonym="ybfO" /pseudo /db_xref="EcoGene:EG13661" CDS 618859..620379 /gene="rhsO" /locus_tag="b0703" /gene_synonym="ECK0691" /gene_synonym="JW0692" /gene_synonym="ybfO" /note="pseudogene, Rhs family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002402" /db_xref="UniProtKB/Swiss-Prot:P77779" /db_xref="EcoGene:EG13661" gene 620376..620945 /gene="ybfC" /locus_tag="b0704" /gene_synonym="ECK0692" /gene_synonym="JW0693" /db_xref="EcoGene:EG11523" CDS 620376..620945 /gene="ybfC" /locus_tag="b0704" /gene_synonym="ECK0692" /gene_synonym="JW0693" /codon_start=1 /transl_table=11 /product="putative secreted protein" /protein_id="AAC73798.1" /db_xref="GI:1786922" /db_xref="ASAP:ABE-0002404" /db_xref="UniProtKB/Swiss-Prot:P28915" /db_xref="EcoGene:EG11523" /translation="MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFP VLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGT LQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYA RMTAHLPNKNESYECLIKIQHELIRSEEK" gene 621171..621410 /gene="ybfQ" /locus_tag="b4514" /gene_synonym="ECK4474" /pseudo /db_xref="EcoGene:EG14419" CDS 621171..621410 /gene="ybfQ" /locus_tag="b4514" /gene_synonym="ECK4474" /note="pseudogene, H repeat-associated protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285035" /db_xref="UniProtKB/Swiss-Prot:Q2EEQ8" /db_xref="EcoGene:EG14419" gene 621551..622687 /gene="ybfL" /locus_tag="b0705" /gene_synonym="ECK0694" /gene_synonym="JW0695" /pseudo /db_xref="EcoGene:EG13417" CDS 621551..622687 /gene="ybfL" /locus_tag="b0705" /gene_synonym="ECK0694" /gene_synonym="JW0695" /note="pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0002407" /db_xref="UniProtKB/Swiss-Prot:P75741" /db_xref="EcoGene:EG13417" gene 622818..623579 /gene="ybfD" /locus_tag="b0706" /gene_synonym="ECK0695" /gene_synonym="JW0696" /db_xref="EcoGene:EG11524" CDS 622818..623579 /gene="ybfD" /locus_tag="b0706" /gene_synonym="ECK0695" /gene_synonym="JW0696" /function="putative enzyme; Not classified" /note="putative DNA ligase" /codon_start=1 /transl_table=11 /product="H repeat-associated putative transposase" /protein_id="AAC73800.1" /db_xref="GI:1786924" /db_xref="ASAP:ABE-0002411" /db_xref="UniProtKB/Swiss-Prot:P28916" /db_xref="EcoGene:EG11524" /translation="MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGW EDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDD KDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLN MLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNP KHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE" gene 623727..624236 /gene="ybgA" /locus_tag="b0707" /gene_synonym="ECK0696" /gene_synonym="JW0697" /gene_synonym="tkp" /db_xref="EcoGene:EG11108" CDS 623727..624236 /gene="ybgA" /locus_tag="b0707" /gene_synonym="ECK0696" /gene_synonym="JW0697" /gene_synonym="tkp" /codon_start=1 /transl_table=11 /product="DUF1722 family protein" /protein_id="AAC73801.1" /db_xref="GI:1786925" /db_xref="ASAP:ABE-0002414" /db_xref="UniProtKB/Swiss-Prot:P24252" /db_xref="EcoGene:EG11108" /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV INLRHSGVL" gene 624233..625651 /gene="phr" /locus_tag="b0708" /gene_synonym="ECK0697" /gene_synonym="JW0698" /gene_synonym="phrB" /db_xref="EcoGene:EG10736" CDS 624233..625651 /gene="phr" /locus_tag="b0708" /gene_synonym="ECK0697" /gene_synonym="JW0698" /gene_synonym="phrB" /EC_number="4.1.99.3" /function="enzyme; DNA - replication, repair, restriction/modification" /note="deoxyribodipyrimidine photolyase (photoreactivation); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="deoxyribodipyrimidine photolyase, FAD-binding" /protein_id="AAC73802.1" /db_xref="GI:1786926" /db_xref="ASAP:ABE-0002417" /db_xref="UniProtKB/Swiss-Prot:P00914" /db_xref="EcoGene:EG10736" /translation="MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAT HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNEL IWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD AAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQP IVEHKEARVQTLAAYEAARKGK" repeat_region 625680..625785 /note="RIP66 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(625801..627282) /gene="dtpD" /locus_tag="b0709" /gene_synonym="ECK0698" /gene_synonym="JW0699" /gene_synonym="ybgH" /db_xref="EcoGene:EG13304" CDS complement(625801..627282) /gene="dtpD" /locus_tag="b0709" /gene_synonym="ECK0698" /gene_synonym="JW0699" /gene_synonym="ybgH" /function="transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="dipeptide and tripeptide permease D" /protein_id="AAC73803.1" /db_xref="GI:1786927" /db_xref="ASAP:ABE-0002420" /db_xref="UniProtKB/Swiss-Prot:P75742" /db_xref="EcoGene:EG13304" /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV LLVATPALITILFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES" gene 627553..628296 /gene="ybgI" /locus_tag="b0710" /gene_synonym="ECK0699" /gene_synonym="JW0700" /db_xref="EcoGene:EG13305" CDS 627553..628296 /gene="ybgI" /locus_tag="b0710" /gene_synonym="ECK0699" /gene_synonym="JW0700" /codon_start=1 /transl_table=11 /product="NIF3 family metal-binding protein" /protein_id="AAC73804.1" /db_xref="GI:1786928" /db_xref="ASAP:ABE-0002424" /db_xref="UniProtKB/Swiss-Prot:P0AFP6" /db_xref="EcoGene:EG13305" /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT ERGGIRALSEWLNENTDLDVTFIDIPNPA" gene 628319..628975 /gene="ybgJ" /locus_tag="b0711" /gene_synonym="ECK0700" /gene_synonym="JW0701" /db_xref="EcoGene:EG13306" CDS 628319..628975 /gene="ybgJ" /locus_tag="b0711" /gene_synonym="ECK0700" /gene_synonym="JW0701" /function="putative enzyme; Not classified" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="putative allophanate hydrolase, subunit 1" /protein_id="AAC73805.1" /db_xref="GI:1786929" /db_xref="ASAP:ABE-0002426" /db_xref="UniProtKB/Swiss-Prot:P0AAV4" /db_xref="EcoGene:EG13306" /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC " gene 628969..629901 /gene="ybgK" /locus_tag="b0712" /gene_synonym="ECK0701" /gene_synonym="JW0702" /db_xref="EcoGene:EG13307" CDS 628969..629901 /gene="ybgK" /locus_tag="b0712" /gene_synonym="ECK0701" /gene_synonym="JW0702" /function="putative enzyme; Not classified" /note="putative carboxylase" /codon_start=1 /transl_table=11 /product="putative allophanate hydrolase, subunit 2" /protein_id="AAC73806.1" /db_xref="GI:1786930" /db_xref="ASAP:ABE-0002428" /db_xref="UniProtKB/Swiss-Prot:P75745" /db_xref="EcoGene:EG13307" /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKSKRDSM EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKR TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN" gene 629891..630625 /gene="ybgL" /locus_tag="b0713" /gene_synonym="ECK0702" /gene_synonym="JW0703" /db_xref="EcoGene:EG13308" CDS 629891..630625 /gene="ybgL" /locus_tag="b0713" /gene_synonym="ECK0702" /gene_synonym="JW0703" /function="phenotype; Not classified" /note="putative lactam utilization protein; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="UPF0271 family protein" /protein_id="AAC73807.1" /db_xref="GI:1786931" /db_xref="ASAP:ABE-0002431" /db_xref="UniProtKB/Swiss-Prot:P75746" /db_xref="EcoGene:EG13308" /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIMQACV REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH VKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVF ADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLH GDGEHALAFARRLRSAFAEKGIVVAA" gene 630661..631452 /gene="nei" /locus_tag="b0714" /gene_synonym="ECK0703" /gene_synonym="JW0704" /db_xref="EcoGene:EG13237" CDS 630661..631452 /gene="nei" /locus_tag="b0714" /gene_synonym="ECK0703" /gene_synonym="JW0704" /EC_number="3.2.-.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="endonuclease VIII and DNA N-glycosylase with an AP lyase activity; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase" /protein_id="AAC73808.1" /db_xref="GI:1786932" /db_xref="ASAP:ABE-0002433" /db_xref="UniProtKB/Swiss-Prot:P50465" /db_xref="EcoGene:EG13237" /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQH VTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL LYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE NKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGCQH" gene complement(631449..632495) /gene="abrB" /locus_tag="b0715" /gene_synonym="ECK0704" /gene_synonym="JW5097" /gene_synonym="ybgN" /db_xref="EcoGene:EG13310" CDS complement(631449..632495) /gene="abrB" /locus_tag="b0715" /gene_synonym="ECK0704" /gene_synonym="JW5097" /gene_synonym="ybgN" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="regulator of aidB expression; inner membrane protein" /protein_id="AAC73809.2" /db_xref="GI:87081776" /db_xref="ASAP:ABE-0002435" /db_xref="UniProtKB/Swiss-Prot:P75747" /db_xref="EcoGene:EG13310" /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLL VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM MLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA IARFISTYAPKRSA" gene complement(632647..633708) /gene="ybgO" /locus_tag="b0716" /gene_synonym="ECK0705" /gene_synonym="JW5098" /db_xref="EcoGene:EG13311" CDS complement(632647..633708) /gene="ybgO" /locus_tag="b0716" /gene_synonym="ECK0705" /gene_synonym="JW5098" /codon_start=1 /transl_table=11 /product="putative fimbrial protein" /protein_id="AAC73810.2" /db_xref="GI:87081777" /db_xref="ASAP:ABE-0002441" /db_xref="UniProtKB/Swiss-Prot:P75748" /db_xref="EcoGene:EG13311" /translation="MSAGKGLLLVICLLFLPLKSAMALNCYFGTSGGAVEKSEAIQPF AVPGNAKPGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTY NGVDYDASLGKSRIDTNQCIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLA RMRLYVKIREMPPHDYQSTLSDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDC SVNFSISPETQVIDFGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEE TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLVYEKTYTAELSSIPG TPIEAGPFDTVVLFKINYN" gene complement(633705..634433) /gene="ybgP" /locus_tag="b0717" /gene_synonym="ECK0706" /gene_synonym="JW0707" /db_xref="EcoGene:EG13312" CDS complement(633705..634433) /gene="ybgP" /locus_tag="b0717" /gene_synonym="ECK0706" /gene_synonym="JW0707" /function="putative factor; Surface structures" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC73811.1" /db_xref="GI:1786936" /db_xref="ASAP:ABE-0002443" /db_xref="UniProtKB/Swiss-Prot:P75749" /db_xref="EcoGene:EG13312" /translation="MTFIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIEN QSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRE TLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQG NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMD DYGALRMTTLNCSGQCRLQAVEAK" gene complement(634448..636895) /gene="ybgQ" /locus_tag="b0718" /gene_synonym="ECK0707" /gene_synonym="JW5099" /db_xref="EcoGene:EG13313" CDS complement(634448..636895) /gene="ybgQ" /locus_tag="b0718" /gene_synonym="ECK0707" /gene_synonym="JW5099" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC73812.2" /db_xref="GI:87081778" /db_xref="ASAP:ABE-0002446" /db_xref="UniProtKB/Swiss-Prot:P75750" /db_xref="EcoGene:EG13313" /translation="MNIYRLSFVSCLVMAMPCAMAVEFNLNVLDKSMRDRIDISLLKE KGVIAPGEYFVSVAVNNNKISNGQKINWQKKGDKTIPCINDSLVDKFGLKPDIRQSLP QIDRCIDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWAPPSTWKEGVAGVLMDY NLFASSYRPQDGSSSTNLNAYGTAGINAGAWRLRSDYQLNKTDSEDNHDQSGGISRTY LFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQT NATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTP FLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLISDDDYHS AAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLAAYR FSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWNADA STTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVGYDM QNSSHSTIHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDISGT YAASDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDYTNH FGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGKDVN VIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQLFTVVWGEQSCIIH LPERLEDTTKRLILPCH" gene complement(636955..637521) /gene="ybgD" /locus_tag="b0719" /gene_synonym="ECK0708" /gene_synonym="JW0709" /db_xref="EcoGene:EG12359" CDS complement(636955..637521) /gene="ybgD" /locus_tag="b0719" /gene_synonym="ECK0708" /gene_synonym="JW0709" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC73813.1" /db_xref="GI:1786938" /db_xref="ASAP:ABE-0002448" /db_xref="UniProtKB/Swiss-Prot:P37909" /db_xref="EcoGene:EG12359" /translation="MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEI HPEDIDKNIDLGQVTTTHINREHHSNKVAVDIRLINCDLPASDNGSGMPVSKVGVTFD STAKTTGATPLLSNTSAGEATGVGVRLMDKNDGNIVLGSAAPDLDLDASSSEQTLNFF AWMEQIDNAVDVTAGEVTANATYVLDYK" gene complement(637911..639194) /gene="gltA" /locus_tag="b0720" /gene_synonym="ECK0709" /gene_synonym="gluT" /gene_synonym="icdB" /gene_synonym="JW0710" /db_xref="EcoGene:EG10402" CDS complement(637911..639194) /gene="gltA" /locus_tag="b0720" /gene_synonym="ECK0709" /gene_synonym="gluT" /gene_synonym="icdB" /gene_synonym="JW0710" /EC_number="2.3.3.1" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="AAC73814.1" /db_xref="GI:1786939" /db_xref="ASAP:ABE-0002451" /db_xref="UniProtKB/Swiss-Prot:P0ABH7" /db_xref="EcoGene:EG10402" /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR" gene 639903..640292 /gene="sdhC" /locus_tag="b0721" /gene_synonym="cybA" /gene_synonym="ECK0710" /gene_synonym="JW0711" /db_xref="EcoGene:EG10933" CDS 639903..640292 /gene="sdhC" /locus_tag="b0721" /gene_synonym="cybA" /gene_synonym="ECK0710" /gene_synonym="JW0711" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="succinate dehydrogenase, cytochrome b556; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, membrane subunit, binds cytochrome b556" /protein_id="AAC73815.1" /db_xref="GI:1786940" /db_xref="ASAP:ABE-0002460" /db_xref="UniProtKB/Swiss-Prot:P69054" /db_xref="EcoGene:EG10933" /translation="MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGIL LWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEET FEAGKRSAKISFVITVVLSLLAGVLVW" gene 640286..640633 /gene="sdhD" /locus_tag="b0722" /gene_synonym="ECK0711" /gene_synonym="JW0712" /db_xref="EcoGene:EG10934" CDS 640286..640633 /gene="sdhD" /locus_tag="b0722" /gene_synonym="ECK0711" /gene_synonym="JW0712" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="succinate dehydrogenase, hydrophobic subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, membrane subunit, binds cytochrome b556" /protein_id="AAC73816.1" /db_xref="GI:1786941" /db_xref="ASAP:ABE-0002464" /db_xref="UniProtKB/Swiss-Prot:P0AC44" /db_xref="EcoGene:EG10934" /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV VYVIYGFVVVWGV" gene 640633..642399 /gene="sdhA" /locus_tag="b0723" /gene_synonym="ECK0712" /gene_synonym="JW0713" /db_xref="EcoGene:EG10931" CDS 640633..642399 /gene="sdhA" /locus_tag="b0723" /gene_synonym="ECK0712" /gene_synonym="JW0713" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, flavoprotein subunit" /protein_id="AAC73817.1" /db_xref="GI:1786942" /db_xref="ASAP:ABE-0002466" /db_xref="UniProtKB/Swiss-Prot:P0AC41" /db_xref="EcoGene:EG10931" /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM TRRSVNMEPKLRPAFPPKIRTY" gene 642415..643131 /gene="sdhB" /locus_tag="b0724" /gene_synonym="ECK0713" /gene_synonym="JW0714" /db_xref="EcoGene:EG10932" CDS 642415..643131 /gene="sdhB" /locus_tag="b0724" /gene_synonym="ECK0713" /gene_synonym="JW0714" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="succinate dehydrogenase, iron sulfur protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="succinate dehydrogenase, FeS subunit" /protein_id="AAC73818.1" /db_xref="GI:1786943" /db_xref="ASAP:ABE-0002468" /db_xref="UniProtKB/Swiss-Prot:P07014" /db_xref="EcoGene:EG10932" /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKE KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK GLNPTRAIGHIKSMLLQRNA" repeat_region 643135..643252 /note="RIP67 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site" gene 643432..646233 /gene="sucA" /locus_tag="b0726" /gene_synonym="ECK0714" /gene_synonym="JW0715" /gene_synonym="lys" /db_xref="EcoGene:EG10979" CDS 643432..646233 /gene="sucA" /locus_tag="b0726" /gene_synonym="ECK0714" /gene_synonym="JW0715" /gene_synonym="lys" /EC_number="1.2.4.2" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="2-oxoglutarate dehydrogenase (decarboxylase component); GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="2-oxoglutarate decarboxylase, thiamine triphosphate-binding" /protein_id="AAC73820.1" /db_xref="GI:1786945" /db_xref="ASAP:ABE-0002478" /db_xref="UniProtKB/Swiss-Prot:P0AFG3" /db_xref="EcoGene:EG10979" /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY MSVHQKQQQDLVNDALNVE" gene 646248..647465 /gene="sucB" /locus_tag="b0727" /gene_synonym="ECK0715" /gene_synonym="JW0716" /db_xref="EcoGene:EG10980" CDS 646248..647465 /gene="sucB" /locus_tag="b0727" /gene_synonym="ECK0715" /gene_synonym="JW0716" /EC_number="2.3.1.61" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component); GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="dihydrolipoyltranssuccinase" /protein_id="AAC73821.1" /db_xref="GI:1786946" /db_xref="ASAP:ABE-0002480" /db_xref="UniProtKB/Swiss-Prot:P0AFG6" /db_xref="EcoGene:EG10980" /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAP AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK ELLEDPTRLLLDV" repeat_region 647488..647654 /note="REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene 647740..648906 /gene="sucC" /locus_tag="b0728" /gene_synonym="ECK0716" /gene_synonym="JW0717" /db_xref="EcoGene:EG10981" CDS 647740..648906 /gene="sucC" /locus_tag="b0728" /gene_synonym="ECK0716" /gene_synonym="JW0717" /EC_number="6.2.1.5" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase, beta subunit" /protein_id="AAC73822.1" /db_xref="GI:1786948" /db_xref="ASAP:ABE-0002483" /db_xref="UniProtKB/Swiss-Prot:P0A836" /db_xref="EcoGene:EG10981" /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIG AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK" gene 648906..649775 /gene="sucD" /locus_tag="b0729" /gene_synonym="ECK0717" /gene_synonym="JW0718" /db_xref="EcoGene:EG10982" CDS 648906..649775 /gene="sucD" /locus_tag="b0729" /gene_synonym="ECK0717" /gene_synonym="JW0718" /EC_number="6.2.1.5" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="succinyl-CoA synthetase, alpha subunit; GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" /protein_id="AAC73823.1" /db_xref="GI:1786949" /db_xref="ASAP:ABE-0002485" /db_xref="UniProtKB/Swiss-Prot:P0AGE9" /db_xref="EcoGene:EG10982" /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS LADIGEALKTVLK" gene complement(649879..650601) /gene="mngR" /locus_tag="b0730" /gene_synonym="ECK0718" /gene_synonym="farR" /gene_synonym="JW0719" /gene_synonym="ybgB" /db_xref="EcoGene:EG11109" CDS complement(649879..650601) /gene="mngR" /locus_tag="b0730" /gene_synonym="ECK0718" /gene_synonym="farR" /gene_synonym="JW0719" /gene_synonym="ybgB" /function="regulator; Energy metabolism, carbon: TCA cycle" /note="transcriptional regulator of succinylCoA synthetase operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="transcriptional repressor for the mannosyl-D-glycerate catabolic operon" /protein_id="AAC73824.1" /db_xref="GI:1786950" /db_xref="ASAP:ABE-0002487" /db_xref="UniProtKB/Swiss-Prot:P13669" /db_xref="EcoGene:EG11109" /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF EVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY SRNAFNTDDYKFTLIAQRKSSR" gene 650710..652686 /gene="mngA" /locus_tag="b0731" /gene_synonym="ECK0719" /gene_synonym="hrsA" /gene_synonym="JW0720" /db_xref="EcoGene:EG13235" CDS 650710..652686 /gene="mngA" /locus_tag="b0731" /gene_synonym="ECK0719" /gene_synonym="hrsA" /gene_synonym="JW0720" /EC_number="2.7.1.69" /function="enzyme; Proteins - translation and modification" /note="protein modification enzyme, induction of ompC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006464 - protein modification process; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component" /protein_id="AAC73825.1" /db_xref="GI:1786951" /db_xref="ASAP:ABE-0002493" /db_xref="UniProtKB/Swiss-Prot:P54745" /db_xref="EcoGene:EG13235" /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEA IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATT PDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVY VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML FVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMA NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF GAALVGAAISTAILLMWRRHAVKHGNYLTDGVMP" gene 652704..655337 /gene="mngB" /locus_tag="b0732" /gene_synonym="ECK0720" /gene_synonym="JW0721" /gene_synonym="ybgG" /db_xref="EcoGene:EG13236" CDS 652704..655337 /gene="mngB" /locus_tag="b0732" /gene_synonym="ECK0720" /gene_synonym="JW0721" /gene_synonym="ybgG" /function="enzyme; Not classified" /note="putative sugar hydrolase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="alpha-mannosidase" /protein_id="AAC73826.1" /db_xref="GI:1786952" /db_xref="ASAP:ABE-0002495" /db_xref="UniProtKB/Swiss-Prot:P54746" /db_xref="EcoGene:EG13236" /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK TEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLP NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGK YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK NHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNL MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV DKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVIR YDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTP FNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVF SEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSC RLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPP VGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQ GSNLSGPFLPGQSRTFSYRLA" repeat_region 655401..655499 /note="RIP69 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 656184..657752 /gene="cydA" /locus_tag="b0733" /gene_synonym="ECK0721" /gene_synonym="JW0722" /db_xref="EcoGene:EG10173" CDS 656184..657752 /gene="cydA" /locus_tag="b0733" /gene_synonym="ECK0721" /gene_synonym="JW0722" /EC_number="1.9.3.-" /function="enzyme; Energy metabolism, carbon: Electron transport" /experiment="N-terminus verified by Edman degradation: PMID 10428033" /note="cytochrome d terminal oxidase, polypeptide subunit I; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytochrome d terminal oxidase, subunit I" /protein_id="AAC73827.2" /db_xref="GI:87081779" /db_xref="ASAP:ABE-0002499" /db_xref="UniProtKB/Swiss-Prot:P0ABJ9" /db_xref="EcoGene:EG10173" /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR YHFEQSSTTTQPAR" gene 657768..658907 /gene="cydB" /locus_tag="b0734" /gene_synonym="ECK0722" /gene_synonym="JW0723" /db_xref="EcoGene:EG10174" CDS 657768..658907 /gene="cydB" /locus_tag="b0734" /gene_synonym="ECK0722" /gene_synonym="JW0723" /EC_number="1.9.3.-" /function="enzyme; Energy metabolism, carbon: Electron transport" /note="cytochrome d terminal oxidase polypeptide subunit II; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytochrome d terminal oxidase, subunit II" /protein_id="AAC73828.1" /db_xref="GI:1786954" /db_xref="ASAP:ABE-0002501" /db_xref="UniProtKB/Swiss-Prot:P0ABK2" /db_xref="EcoGene:EG10174" /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY" gene 658922..659035 /gene="cydX" /locus_tag="b4515" /gene_synonym="ECK0723" /gene_synonym="JW0724" /gene_synonym="ybgT" /db_xref="EcoGene:EG14329" CDS 658922..659035 /gene="cydX" /locus_tag="b4515" /gene_synonym="ECK0723" /gene_synonym="JW0724" /gene_synonym="ybgT" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="cytochrome d (bd-I) ubiquinol oxidase subunit X" /protein_id="ABD18645.1" /db_xref="GI:87081780" /db_xref="ASAP:ABE-0285036" /db_xref="UniProtKB/Swiss-Prot:P56100" /db_xref="EcoGene:EG14329" /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI" gene 659035..659328 /gene="ybgE" /locus_tag="b0735" /gene_synonym="ECK0724" /gene_synonym="JW0725" /db_xref="EcoGene:EG12395" CDS 659035..659328 /gene="ybgE" /locus_tag="b0735" /gene_synonym="ECK0724" /gene_synonym="JW0725" /codon_start=1 /transl_table=11 /product="putative inner membrane protein in cydABX-ybgE operon" /protein_id="AAC73829.1" /db_xref="GI:1786956" /db_xref="ASAP:ABE-0002505" /db_xref="UniProtKB/Swiss-Prot:P0AAV0" /db_xref="EcoGene:EG12395" /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF" gene 659478..659882 /gene="ybgC" /locus_tag="b0736" /gene_synonym="ECK0725" /gene_synonym="JW0726" /db_xref="EcoGene:EG11110" CDS 659478..659882 /gene="ybgC" /locus_tag="b0736" /gene_synonym="ECK0725" /gene_synonym="JW0726" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl-CoA thioester hydrolase" /protein_id="AAC73830.1" /db_xref="GI:1786957" /db_xref="ASAP:ABE-0002508" /db_xref="UniProtKB/Swiss-Prot:P0A8Z3" /db_xref="EcoGene:EG11110" /translation="MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ" gene 659879..660571 /gene="tolQ" /locus_tag="b0737" /gene_synonym="ECK0726" /gene_synonym="fii" /gene_synonym="JW0727" /gene_synonym="tolP" /db_xref="EcoGene:EG11010" CDS 659879..660571 /gene="tolQ" /locus_tag="b0737" /gene_synonym="ECK0726" /gene_synonym="fii" /gene_synonym="JW0727" /gene_synonym="tolP" /function="membrane; Colicin-related functions" /experiment="N-terminus verified by Edman degradation: PMID 8300535" /note="inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TolA-TolQ-TolR complex" /protein_id="AAC73831.1" /db_xref="GI:1786958" /db_xref="ASAP:ABE-0002511" /db_xref="UniProtKB/Swiss-Prot:P0ABU9" /db_xref="EcoGene:EG11010" /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH RQAFTVSESNKG" gene 660575..661003 /gene="tolR" /locus_tag="b0738" /gene_synonym="ECK0727" /gene_synonym="JW0728" /db_xref="EcoGene:EG11011" CDS 660575..661003 /gene="tolR" /locus_tag="b0738" /gene_synonym="ECK0727" /gene_synonym="JW0728" /function="putative transport; Not classified" /note="putative inner membrane protein, involved in the tonB-independent uptake of group A colicins; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TolA-TolQ-TolR complex" /protein_id="AAC73832.1" /db_xref="GI:1786959" /db_xref="ASAP:ABE-0002513" /db_xref="UniProtKB/Swiss-Prot:P0ABV6" /db_xref="EcoGene:EG11011" /translation="MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI" gene 661068..662333 /gene="tolA" /locus_tag="b0739" /gene_synonym="cim" /gene_synonym="ECK0728" /gene_synonym="excC" /gene_synonym="JW0729" /gene_synonym="lky" /db_xref="EcoGene:EG11007" CDS 661068..662333 /gene="tolA" /locus_tag="b0739" /gene_synonym="cim" /gene_synonym="ECK0728" /gene_synonym="excC" /gene_synonym="JW0729" /gene_synonym="lky" /function="membrane; Colicin-related functions" /note="membrane spanning protein, required for outer membrane integrity; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="membrane anchored protein in TolA-TolQ-TolR complex" /protein_id="AAC73833.1" /db_xref="GI:1786960" /db_xref="ASAP:ABE-0002515" /db_xref="UniProtKB/Swiss-Prot:P19934" /db_xref="EcoGene:EG11007" /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA KKAAADAKKKAEAEAAKAAAEAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEK AKAEAEKKAAAEKAAADKKAAAEKAAADKKAAEKAAAEKAAADKKAAAEKAAADKKAA AAKAAAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASG ADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAAL AAAKLAKIPKPPSQAVYEVFKNAPLDFKP" gene 662466..663758 /gene="tolB" /locus_tag="b0740" /gene_synonym="ECK0729" /gene_synonym="JW5100" /db_xref="EcoGene:EG11008" CDS 662466..663758 /gene="tolB" /locus_tag="b0740" /gene_synonym="ECK0729" /gene_synonym="JW5100" /function="factor; Colicin-related functions" /note="periplasmic protein involved in the tonb-independent uptake of group A colicins; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="periplasmic protein" /protein_id="AAC73834.1" /db_xref="GI:1786961" /db_xref="ASAP:ABE-0002517" /db_xref="UniProtKB/Swiss-Prot:P0A855" /db_xref="EcoGene:EG11008" /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVG QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL" gene 663793..664314 /gene="pal" /locus_tag="b0741" /gene_synonym="ECK0730" /gene_synonym="excC" /gene_synonym="JW0731" /db_xref="EcoGene:EG10684" CDS 663793..664314 /gene="pal" /locus_tag="b0741" /gene_synonym="ECK0730" /gene_synonym="excC" /gene_synonym="JW0731" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /note="peptidoglycan-associated lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="peptidoglycan-associated outer membrane lipoprotein" /protein_id="AAC73835.1" /db_xref="GI:1786962" /db_xref="ASAP:ABE-0002521" /db_xref="UniProtKB/Swiss-Prot:P0A912" /db_xref="EcoGene:EG10684" /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE AAYSKNRRAVLVY" gene 664324..665115 /gene="ybgF" /locus_tag="b0742" /gene_synonym="ECK0731" /gene_synonym="JW0732" /db_xref="EcoGene:EG12854" CDS 664324..665115 /gene="ybgF" /locus_tag="b0742" /gene_synonym="ECK0731" /gene_synonym="JW0732" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="periplasmic TolA-binding protein" /protein_id="AAC73836.1" /db_xref="GI:1786963" /db_xref="ASAP:ABE-0002523" /db_xref="UniProtKB/Swiss-Prot:P45955" /db_xref="EcoGene:EG12854" /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS SGGAAAQSTSGDQSGAAASTTPTADAGTANAGAPVKSGNANTDYNAAIALVQDKSRQD DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM" gene 665280..665355 /gene="lysT" /locus_tag="b0743" /gene_synonym="ECK0732" /gene_synonym="JWR0018" /gene_synonym="lysTalpha" /gene_synonym="sua" /gene_synonym="supG" /gene_synonym="supL" /db_xref="EcoGene:EG30055" tRNA 665280..665355 /gene="lysT" /locus_tag="b0743" /gene_synonym="ECK0732" /gene_synonym="JWR0018" /gene_synonym="lysTalpha" /gene_synonym="sua" /gene_synonym="supG" /gene_synonym="supL" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002525" /db_xref="EcoGene:EG30055" gene 665491..665566 /gene="valT" /locus_tag="b0744" /gene_synonym="ECK0733" /gene_synonym="JWR0019" /db_xref="EcoGene:EG30109" tRNA 665491..665566 /gene="valT" /locus_tag="b0744" /gene_synonym="ECK0733" /gene_synonym="JWR0019" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0002527" /db_xref="EcoGene:EG30109" gene 665569..665644 /gene="lysW" /locus_tag="b0745" /gene_synonym="ECK0734" /gene_synonym="JWR0020" /gene_synonym="lysTbeta" /gene_synonym="su" /db_xref="EcoGene:EG30057" tRNA 665569..665644 /gene="lysW" /locus_tag="b0745" /gene_synonym="ECK0734" /gene_synonym="JWR0020" /gene_synonym="lysTbeta" /gene_synonym="su" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002529" /db_xref="EcoGene:EG30057" gene 665794..665869 /gene="valZ" /locus_tag="b0746" /gene_synonym="ECK0735" /gene_synonym="JWR0021" /db_xref="EcoGene:EG31125" tRNA 665794..665869 /gene="valZ" /locus_tag="b0746" /gene_synonym="ECK0735" /gene_synonym="JWR0021" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0002531" /db_xref="EcoGene:EG31125" gene 665873..665948 /gene="lysY" /locus_tag="b0747" /gene_synonym="ECK0736" /gene_synonym="JWR0022" /db_xref="EcoGene:EG31123" tRNA 665873..665948 /gene="lysY" /locus_tag="b0747" /gene_synonym="ECK0736" /gene_synonym="JWR0022" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002533" /db_xref="EcoGene:EG31123" gene 666095..666170 /gene="lysZ" /locus_tag="b0748" /gene_synonym="ECK0737" /gene_synonym="JWR0023" /db_xref="EcoGene:EG31124" tRNA 666095..666170 /gene="lysZ" /locus_tag="b0748" /gene_synonym="ECK0737" /gene_synonym="JWR0023" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002535" /db_xref="EcoGene:EG31124" gene 666303..666378 /gene="lysQ" /locus_tag="b0749" /gene_synonym="ECK0738" /gene_synonym="JWR0024" /db_xref="EcoGene:EG31122" tRNA 666303..666378 /gene="lysQ" /locus_tag="b0749" /gene_synonym="ECK0738" /gene_synonym="JWR0024" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0002537" /db_xref="EcoGene:EG31122" gene 666811..667854 /gene="nadA" /locus_tag="b0750" /gene_synonym="ECK0739" /gene_synonym="JW0733" /gene_synonym="nicA" /db_xref="EcoGene:EG10630" CDS 666811..667854 /gene="nadA" /locus_tag="b0750" /gene_synonym="ECK0739" /gene_synonym="JW0733" /gene_synonym="nicA" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /note="quinolinate synthetase, A protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="quinolinate synthase, subunit A" /protein_id="AAC73837.1" /db_xref="GI:1786964" /db_xref="ASAP:ABE-0002541" /db_xref="UniProtKB/Swiss-Prot:P11458" /db_xref="EcoGene:EG10630" /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP LNRMLDFAATLRG" gene 667892..668611 /gene="pnuC" /locus_tag="b0751" /gene_synonym="ECK0740" /gene_synonym="JW0734" /db_xref="EcoGene:EG11700" CDS 667892..668611 /gene="pnuC" /locus_tag="b0751" /gene_synonym="ECK0740" /gene_synonym="JW0734" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="required for NMN transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="nicotinamide riboside transporter" /protein_id="AAC73838.1" /db_xref="GI:1786965" /db_xref="ASAP:ABE-0002547" /db_xref="UniProtKB/Swiss-Prot:P0AFK2" /db_xref="EcoGene:EG11700" /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA LNGSRMWINSARERGSRALSH" gene complement(668608..669549) /gene="zitB" /locus_tag="b0752" /gene_synonym="ECK0741" /gene_synonym="JW0735" /gene_synonym="ybgR" /db_xref="EcoGene:EG13662" CDS complement(668608..669549) /gene="zitB" /locus_tag="b0752" /gene_synonym="ECK0741" /gene_synonym="JW0735" /gene_synonym="ybgR" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="zinc efflux system" /protein_id="AAC73839.1" /db_xref="GI:1786966" /db_xref="ASAP:ABE-0002549" /db_xref="UniProtKB/Swiss-Prot:P75757" /db_xref="EcoGene:EG13662" /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPV SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH" gene complement(669663..670043) /gene="ybgS" /locus_tag="b0753" /gene_synonym="ECK0742" /gene_synonym="JW0736" /db_xref="EcoGene:EG13663" CDS complement(669663..670043) /gene="ybgS" /locus_tag="b0753" /gene_synonym="ECK0742" /gene_synonym="JW0736" /function="putative regulator; Not classified" /note="putative homeobox protein" /codon_start=1 /transl_table=11 /product="putative periplasmic protein" /protein_id="AAC73840.1" /db_xref="GI:1786968" /db_xref="ASAP:ABE-0002553" /db_xref="UniProtKB/Swiss-Prot:P0AAV6" /db_xref="EcoGene:EG13663" /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQ VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD INKKVQTGDGINNDVDTKTDGTTQ" gene 670359..671411 /gene="aroG" /locus_tag="b0754" /gene_synonym="ECK0743" /gene_synonym="JW0737" /db_xref="EcoGene:EG10079" CDS 670359..671411 /gene="aroG" /locus_tag="b0754" /gene_synonym="ECK0743" /gene_synonym="JW0737" /EC_number="2.5.1.54" /function="enzyme; Amino acid biosynthesis: Phenylalanine" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9740056" /note="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible); GO_process: GO:0009094 - L-phenylalanine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible" /protein_id="AAC73841.1" /db_xref="GI:1786969" /db_xref="ASAP:ABE-0002560" /db_xref="UniProtKB/Swiss-Prot:P0AB91" /db_xref="EcoGene:EG10079" /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT DALLRQLANAVKARRG" repeat_region 671461..671495 /note="REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(671569..672321) /gene="gpmA" /locus_tag="b0755" /gene_synonym="ECK0744" /gene_synonym="gpm" /gene_synonym="JW0738" /db_xref="EcoGene:EG11699" CDS complement(671569..672321) /gene="gpmA" /locus_tag="b0755" /gene_synonym="ECK0744" /gene_synonym="gpm" /gene_synonym="JW0738" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_process: GO:0006096 - glycolysis; GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase 1" /protein_id="AAC73842.1" /db_xref="GI:1786970" /db_xref="ASAP:ABE-0002563" /db_xref="UniProtKB/Swiss-Prot:P62707" /db_xref="EcoGene:EG11699" /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF DENFKPLKRYYLGNADEIAAKAAAVANQGKAK" gene complement(672523..673563) /gene="galM" /locus_tag="b0756" /gene_synonym="ECK0745" /gene_synonym="JW0739" /db_xref="EcoGene:EG11698" CDS complement(672523..673563) /gene="galM" /locus_tag="b0756" /gene_synonym="ECK0745" /gene_synonym="JW0739" /EC_number="5.1.3.3" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="aldose 1-epimerase; type-1 mutarotase; galactose mutarotase" /protein_id="AAC73843.1" /db_xref="GI:1786971" /db_xref="ASAP:ABE-0002566" /db_xref="UniProtKB/Swiss-Prot:P0A9C3" /db_xref="EcoGene:EG11698" /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE YSSLTEYQFIAE" gene complement(673557..674705) /gene="galK" /locus_tag="b0757" /gene_synonym="ECK0746" /gene_synonym="galA" /gene_synonym="JW0740" /db_xref="EcoGene:EG10363" CDS complement(673557..674705) /gene="galK" /locus_tag="b0757" /gene_synonym="ECK0746" /gene_synonym="galA" /gene_synonym="JW0740" /EC_number="2.7.1.6" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0006012 - galactose metabolic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="galactokinase" /protein_id="AAC73844.1" /db_xref="GI:1786972" /db_xref="ASAP:ABE-0002568" /db_xref="UniProtKB/Swiss-Prot:P0A6T3" /db_xref="EcoGene:EG10363" /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKH LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC" gene complement(674709..675755) /gene="galT" /locus_tag="b0758" /gene_synonym="ECK0747" /gene_synonym="galB" /gene_synonym="JW0741" /db_xref="EcoGene:EG10366" CDS complement(674709..675755) /gene="galT" /locus_tag="b0758" /gene_synonym="ECK0747" /gene_synonym="galB" /gene_synonym="JW0741" /EC_number="2.7.7.10" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0006012 - galactose metabolic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="galactose-1-phosphate uridylyltransferase" /protein_id="AAC73845.1" /db_xref="GI:1786973" /db_xref="ASAP:ABE-0002573" /db_xref="UniProtKB/Swiss-Prot:P09148" /db_xref="EcoGene:EG10366" /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV LPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSA RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER LRAVSDIHFRESGV" gene complement(675765..676781) /gene="galE" /locus_tag="b0759" /gene_synonym="ECK0748" /gene_synonym="galD" /gene_synonym="JW0742" /db_xref="EcoGene:EG10362" CDS complement(675765..676781) /gene="galE" /locus_tag="b0759" /gene_synonym="ECK0748" /gene_synonym="galD" /gene_synonym="JW0742" /EC_number="5.1.3.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 4613352,9119048" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0006012 - galactose metabolic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009435 - NAD biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="UDP-galactose-4-epimerase" /protein_id="AAC73846.1" /db_xref="GI:1786974" /db_xref="ASAP:ABE-0002575" /db_xref="UniProtKB/Swiss-Prot:P09147" /db_xref="EcoGene:EG10362" /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAF SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ GYPD" repeat_region 676990..677023 /note="REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(677042..678514) /gene="modF" /locus_tag="b0760" /gene_synonym="chlD" /gene_synonym="ECK0749" /gene_synonym="JW0743" /gene_synonym="phrA" /db_xref="EcoGene:EG11677" CDS complement(677042..678514) /gene="modF" /locus_tag="b0760" /gene_synonym="chlD" /gene_synonym="ECK0749" /gene_synonym="JW0743" /gene_synonym="phrA" /function="transport; Transport of small molecules: Anions" /note="ATP-binding component of molybdate transport system; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042888 - molybdenum ion transmembrane transporter activity; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter ATPase" /protein_id="AAC73847.1" /db_xref="GI:1786975" /db_xref="ASAP:ABE-0002582" /db_xref="UniProtKB/Swiss-Prot:P31060" /db_xref="EcoGene:EG11677" /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK RTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY" gene complement(678582..679370) /gene="modE" /locus_tag="b0761" /gene_synonym="chlD" /gene_synonym="ECK0750" /gene_synonym="JW0744" /gene_synonym="modR" /db_xref="EcoGene:EG13227" CDS complement(678582..679370) /gene="modE" /locus_tag="b0761" /gene_synonym="chlD" /gene_synonym="ECK0750" /gene_synonym="JW0744" /gene_synonym="modR" /function="regulator; Transport of small molecules: Anions" /note="molybdate uptake regulatory protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor for the molybdenum transport operon modABC" /protein_id="AAC73848.1" /db_xref="GI:1786976" /db_xref="ASAP:ABE-0002585" /db_xref="UniProtKB/Swiss-Prot:P0A9G8" /db_xref="EcoGene:EG13227" /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCE VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC" gene 679499..679648 /gene="acrZ" /locus_tag="b0762" /gene_synonym="ECK0751" /gene_synonym="JW5102" /gene_synonym="ybhT" /db_xref="EcoGene:EG14328" CDS 679499..679648 /gene="acrZ" /locus_tag="b0762" /gene_synonym="ECK0751" /gene_synonym="JW5102" /gene_synonym="ybhT" /codon_start=1 /transl_table=11 /product="AcrAB-TolC efflux pump accessory protein, membrane-associated" /protein_id="AAC73849.1" /db_xref="GI:1786977" /db_xref="ASAP:ABE-0002595" /db_xref="UniProtKB/Swiss-Prot:P0AAW9" /db_xref="EcoGene:EG14328" /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ PGQNH" gene 679815..680588 /gene="modA" /locus_tag="b0763" /gene_synonym="ECK0752" /gene_synonym="JW0746" /db_xref="EcoGene:EG12427" CDS 679815..680588 /gene="modA" /locus_tag="b0763" /gene_synonym="ECK0752" /gene_synonym="JW0746" /function="transport; Transport of small molecules: Anions" /note="molybdate-binding periplasmic protein; permease; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter periplasmic binding protein; chlorate resistance protein" /protein_id="AAC73850.1" /db_xref="GI:1786979" /db_xref="ASAP:ABE-0002601" /db_xref="UniProtKB/Swiss-Prot:P37329" /db_xref="EcoGene:EG12427" /translation="MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDI ATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQ TLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKV EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK" gene 680588..681277 /gene="modB" /locus_tag="b0764" /gene_synonym="chlJ" /gene_synonym="ECK0753" /gene_synonym="JW0747" /db_xref="EcoGene:EG10002" CDS 680588..681277 /gene="modB" /locus_tag="b0764" /gene_synonym="chlJ" /gene_synonym="ECK0753" /gene_synonym="JW0747" /function="transport; Transport of small molecules: Anions" /note="molybdate transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter permease; chlorate resistance protein" /protein_id="AAC73851.1" /db_xref="GI:1786980" /db_xref="ASAP:ABE-0002603" /db_xref="UniProtKB/Swiss-Prot:P0AF01" /db_xref="EcoGene:EG10002" /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW LARISRERAGR" gene 681280..682338 /gene="modC" /locus_tag="b0765" /gene_synonym="chlD" /gene_synonym="ECK0754" /gene_synonym="JW0748" /gene_synonym="narD" /db_xref="EcoGene:EG10152" CDS 681280..682338 /gene="modC" /locus_tag="b0765" /gene_synonym="chlD" /gene_synonym="ECK0754" /gene_synonym="JW0748" /gene_synonym="narD" /EC_number="3.6.3.29" /function="transport; Transport of small molecules: Anions" /note="ATP-binding component of molybdate transport; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter ATPase; chlorate resistance protein" /protein_id="AAC73852.1" /db_xref="GI:1786981" /db_xref="ASAP:ABE-0002605" /db_xref="UniProtKB/Swiss-Prot:P09833" /db_xref="EcoGene:EG10152" /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMS KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA IKPGLWLYAQIKSVSITA" gene complement(682339..683157) /gene="ybhA" /locus_tag="b0766" /gene_synonym="ECK0755" /gene_synonym="JW0749" /gene_synonym="modD" /db_xref="EcoGene:EG11239" CDS complement(682339..683157) /gene="ybhA" /locus_tag="b0766" /gene_synonym="ECK0755" /gene_synonym="JW0749" /gene_synonym="modD" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="pyridoxal phosphate (PLP) phosphatase" /protein_id="AAC73853.1" /db_xref="GI:1786982" /db_xref="ASAP:ABE-0002607" /db_xref="UniProtKB/Swiss-Prot:P21829" /db_xref="EcoGene:EG11239" /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHI HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI" gene 683312..684307 /gene="pgl" /locus_tag="b0767" /gene_synonym="blu" /gene_synonym="ECK0756" /gene_synonym="JW0750" /gene_synonym="ybhE" /db_xref="EcoGene:EG13231" CDS 683312..684307 /gene="pgl" /locus_tag="b0767" /gene_synonym="blu" /gene_synonym="ECK0756" /gene_synonym="JW0750" /gene_synonym="ybhE" /EC_number="3.1.1.31" /function="orf; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="AAC73854.1" /db_xref="GI:1786983" /db_xref="ASAP:ABE-0002611" /db_xref="UniProtKB/Swiss-Prot:P52697" /db_xref="EcoGene:EG13231" /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH" gene complement(684348..685301) /gene="ybhD" /locus_tag="b0768" /gene_synonym="ECK0757" /gene_synonym="JW5896" /db_xref="EcoGene:EG13230" CDS complement(684348..685301) /gene="ybhD" /locus_tag="b0768" /gene_synonym="ECK0757" /gene_synonym="JW5896" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC73855.2" /db_xref="GI:145693105" /db_xref="ASAP:ABE-0002613" /db_xref="UniProtKB/Swiss-Prot:P52696" /db_xref="EcoGene:EG13230" /translation="MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEED LHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPT AVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLD WFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKD AVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG" gene 685485..686537 /gene="ybhH" /locus_tag="b0769" /gene_synonym="ECK0758" /gene_synonym="JW0752" /db_xref="EcoGene:EG13664" CDS 685485..686537 /gene="ybhH" /locus_tag="b0769" /gene_synonym="ECK0758" /gene_synonym="JW0752" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative PrpF family isomerase" /protein_id="AAC73856.1" /db_xref="GI:1786985" /db_xref="ASAP:ABE-0002618" /db_xref="UniProtKB/Swiss-Prot:P0AAV8" /db_xref="EcoGene:EG13664" /translation="MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGND LEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGA FAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVA LTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELD ADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRA LAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRAS VIRTTRKIFSGEVYLP" gene 686613..688046 /gene="ybhI" /locus_tag="b0770" /gene_synonym="ECK0759" /gene_synonym="JW0753" /db_xref="EcoGene:EG13665" CDS 686613..688046 /gene="ybhI" /locus_tag="b0770" /gene_synonym="ECK0759" /gene_synonym="JW0753" /function="orf; Not classified" /note="putative membrane pump protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative DASS family tricarboxylate or dicarboxylate transporter" /protein_id="AAC73857.1" /db_xref="GI:1786986" /db_xref="ASAP:ABE-0002621" /db_xref="UniProtKB/Swiss-Prot:P75763" /db_xref="EcoGene:EG13665" /translation="MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIV GLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAA FVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSV AVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISW GGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLG VFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGII GLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAML PVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGA VLTILTFLVHITLGVWWWNMLIGWNML" gene 688229..690490 /gene="ybhJ" /locus_tag="b0771" /gene_synonym="ECK0760" /gene_synonym="JW5103" /db_xref="EcoGene:EG13666" CDS 688229..690490 /gene="ybhJ" /locus_tag="b0771" /gene_synonym="ECK0760" /gene_synonym="JW5103" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="aconitase family protein" /protein_id="AAC73858.2" /db_xref="GI:87081781" /db_xref="ASAP:ABE-0002626" /db_xref="UniProtKB/Swiss-Prot:P75764" /db_xref="EcoGene:EG13666" /translation="MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSS HNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGT INGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVK NKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQL NPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAH GKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPS SQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREG SKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQG FVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRS NPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPL QTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQM AEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIK AGSLINFNKNRQM" repeat_region 690530..690707 /note="REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(690724..692007) /gene="ybhC" /locus_tag="b0772" /gene_synonym="ECK0761" /gene_synonym="JW0755" /db_xref="EcoGene:EG12875" CDS complement(690724..692007) /gene="ybhC" /locus_tag="b0772" /gene_synonym="ECK0761" /gene_synonym="JW0755" /function="putative enzyme" /note="putative pectinesterase; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0008152 - metabolic process; GO_process: GO:0000272 - polysaccharide catabolic process" /codon_start=1 /transl_table=11 /product="acyl-CoA thioesterase, lipoprotein" /protein_id="AAC73859.1" /db_xref="GI:1786989" /db_xref="ASAP:ABE-0002629" /db_xref="UniProtKB/Swiss-Prot:P46130" /db_xref="EcoGene:EG12875" /translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK" gene complement(692159..692635) /gene="ybhB" /locus_tag="b0773" /gene_synonym="ECK0762" /gene_synonym="JW0756" /db_xref="EcoGene:EG11238" CDS complement(692159..692635) /gene="ybhB" /locus_tag="b0773" /gene_synonym="ECK0762" /gene_synonym="JW0756" /codon_start=1 /transl_table=11 /product="kinase inhibitor homolog, UPF0098 family" /protein_id="AAC73860.1" /db_xref="GI:1786990" /db_xref="ASAP:ABE-0002632" /db_xref="UniProtKB/Swiss-Prot:P12994" /db_xref="EcoGene:EG11238" /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG YDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS" gene complement(692694..693983) /gene="bioA" /locus_tag="b0774" /gene_synonym="ECK0763" /gene_synonym="JW0757" /db_xref="EcoGene:EG10117" CDS complement(692694..693983) /gene="bioA" /locus_tag="b0774" /gene_synonym="ECK0763" /gene_synonym="JW0757" /EC_number="2.6.1.62" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /note="7,8-diaminopelargonic acid synthetase; GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="7,8-diaminopelargonic acid synthase, PLP-dependent" /protein_id="AAC73861.1" /db_xref="GI:1786991" /db_xref="ASAP:ABE-0002635" /db_xref="UniProtKB/Swiss-Prot:P12995" /db_xref="EcoGene:EG10117" /translation="MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP LECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG GMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ QVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRP FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ" gene 694070..695110 /gene="bioB" /locus_tag="b0775" /gene_synonym="ECK0764" /gene_synonym="JW0758" /db_xref="EcoGene:EG10118" CDS 694070..695110 /gene="bioB" /locus_tag="b0775" /gene_synonym="ECK0764" /gene_synonym="JW0758" /EC_number="2.8.1.6" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /experiment="N-terminus verified by Edman degradation: PMID 8142361" /note="biotin synthesis, sulfur insertion?; GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="biotin synthase" /protein_id="AAC73862.1" /db_xref="GI:1786992" /db_xref="ASAP:ABE-0002644" /db_xref="UniProtKB/Swiss-Prot:P12996" /db_xref="EcoGene:EG10118" /translation="MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVST LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT PDTDEYYNAAAL" gene 695107..696261 /gene="bioF" /locus_tag="b0776" /gene_synonym="ECK0765" /gene_synonym="JW0759" /db_xref="EcoGene:EG10121" CDS 695107..696261 /gene="bioF" /locus_tag="b0776" /gene_synonym="ECK0765" /gene_synonym="JW0759" /EC_number="2.3.1.47" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /note="GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="8-amino-7-oxononanoate synthase" /protein_id="AAC73863.1" /db_xref="GI:1786993" /db_xref="ASAP:ABE-0002646" /db_xref="UniProtKB/Swiss-Prot:P12998" /db_xref="EcoGene:EG10121" /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF SSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRA LLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLAR LLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQAL RASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG" gene 696248..697003 /gene="bioC" /locus_tag="b0777" /gene_synonym="ECK0766" /gene_synonym="JW0760" /db_xref="EcoGene:EG10119" CDS 696248..697003 /gene="bioC" /locus_tag="b0777" /gene_synonym="ECK0766" /gene_synonym="JW0760" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /note="biotin biosynthesis; reaction prior to pimeloyl CoA; GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="malonyl-ACP O-methyltransferase, SAM-dependent" /protein_id="AAC73864.1" /db_xref="GI:1786994" /db_xref="ASAP:ABE-0002648" /db_xref="UniProtKB/Swiss-Prot:P12999" /db_xref="EcoGene:EG10119" /translation="MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYT HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA TFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERP HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE" gene 696996..697673 /gene="bioD" /locus_tag="b0778" /gene_synonym="ECK0767" /gene_synonym="JW0761" /db_xref="EcoGene:EG10120" CDS 696996..697673 /gene="bioD" /locus_tag="b0778" /gene_synonym="ECK0767" /gene_synonym="JW0761" /EC_number="6.3.3.3" /function="enzyme; Biosynthesis of cofactors, carriers: Biotin" /note="GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="dethiobiotin synthetase" /protein_id="AAC73865.1" /db_xref="GI:1786995" /db_xref="ASAP:ABE-0002650" /db_xref="UniProtKB/Swiss-Prot:P13000" /db_xref="EcoGene:EG10120" /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGS EKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA QVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK YINLALL" gene 698252..700273 /gene="uvrB" /locus_tag="b0779" /gene_synonym="dar-1" /gene_synonym="dar-6" /gene_synonym="ECK0768" /gene_synonym="JW0762" /db_xref="EcoGene:EG11062" CDS 698252..700273 /gene="uvrB" /locus_tag="b0779" /gene_synonym="dar-1" /gene_synonym="dar-6" /gene_synonym="ECK0768" /gene_synonym="JW0762" /function="enzyme; Degradation of DNA" /note="DNA repair; excision nuclease subunit B; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009314 - response to radiation; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="exision nuclease of nucleotide excision repair, DNA damage recognition component" /protein_id="AAC73866.1" /db_xref="GI:1786996" /db_xref="ASAP:ABE-0002658" /db_xref="UniProtKB/Swiss-Prot:P0A8F8" /db_xref="EcoGene:EG11062" /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS" repeat_region 700311..700407 /note="RIP73 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(700465..701373) /gene="ybhK" /locus_tag="b0780" /gene_synonym="ECK0769" /gene_synonym="JW0763" /db_xref="EcoGene:EG13667" CDS complement(700465..701373) /gene="ybhK" /locus_tag="b0780" /gene_synonym="ECK0769" /gene_synonym="JW0763" /function="putative structure; Not classified" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="putative CofD superfamily transferase" /protein_id="AAC73867.1" /db_xref="GI:1786997" /db_xref="ASAP:ABE-0002661" /db_xref="UniProtKB/Swiss-Prot:P75767" /db_xref="EcoGene:EG13667" /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL EASDIPYRHDRQLLHNALEKALQALG" gene 701770..702759 /gene="moaA" /locus_tag="b0781" /gene_synonym="bisA" /gene_synonym="chlA" /gene_synonym="ECK0770" /gene_synonym="JW0764" /gene_synonym="narA" /db_xref="EcoGene:EG11595" CDS 701770..702759 /gene="moaA" /locus_tag="b0781" /gene_synonym="bisA" /gene_synonym="chlA" /gene_synonym="ECK0770" /gene_synonym="JW0764" /gene_synonym="narA" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /experiment="N-terminus verified by Edman degradation: PMID 8361352" /note="molybdopterin biosynthesis, protein A; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein A" /protein_id="AAC73868.1" /db_xref="GI:1786999" /db_xref="ASAP:ABE-0002669" /db_xref="UniProtKB/Swiss-Prot:P30745" /db_xref="EcoGene:EG11595" /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK GFLTVDEIRRVTRAFARLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG YRLERDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG" gene 702781..703293 /gene="moaB" /locus_tag="b0782" /gene_synonym="ECK0771" /gene_synonym="JW0765" /db_xref="EcoGene:EG11596" CDS 702781..703293 /gene="moaB" /locus_tag="b0782" /gene_synonym="ECK0771" /gene_synonym="JW0765" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /note="moaB is not required for molybdopterin biosynthesis; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="inactive molybdopterin adenylyltransferase" /protein_id="AAC73869.1" /db_xref="GI:1787000" /db_xref="ASAP:ABE-0002671" /db_xref="UniProtKB/Swiss-Prot:P0AEZ9" /db_xref="EcoGene:EG11596" /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR PCNFHPHLKK" gene 703296..703781 /gene="moaC" /locus_tag="b0783" /gene_synonym="ECK0772" /gene_synonym="JW0766" /db_xref="EcoGene:EG11666" CDS 703296..703781 /gene="moaC" /locus_tag="b0783" /gene_synonym="ECK0772" /gene_synonym="JW0766" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /note="GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis, protein C" /protein_id="AAC73870.1" /db_xref="GI:1787001" /db_xref="ASAP:ABE-0002673" /db_xref="UniProtKB/Swiss-Prot:P0A738" /db_xref="EcoGene:EG11666" /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD D" gene 703774..704019 /gene="moaD" /locus_tag="b0784" /gene_synonym="chlM" /gene_synonym="ECK0773" /gene_synonym="JW0767" /db_xref="EcoGene:EG11597" CDS 703774..704019 /gene="moaD" /locus_tag="b0784" /gene_synonym="chlM" /gene_synonym="ECK0773" /gene_synonym="JW0767" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /experiment="N-terminus verified by Edman degradation: PMID 8514782" /note="molybdopterin biosynthesis; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin synthase, small subunit" /protein_id="AAC73871.1" /db_xref="GI:1787002" /db_xref="ASAP:ABE-0002675" /db_xref="UniProtKB/Swiss-Prot:P30748" /db_xref="EcoGene:EG11597" /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG" gene 704021..704473 /gene="moaE" /locus_tag="b0785" /gene_synonym="ECK0774" /gene_synonym="JW0768" /db_xref="EcoGene:EG11598" CDS 704021..704473 /gene="moaE" /locus_tag="b0785" /gene_synonym="ECK0774" /gene_synonym="JW0768" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /note="molybdopterin converting factor, subunit 2; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin synthase, large subunit" /protein_id="AAC73872.1" /db_xref="GI:1787003" /db_xref="ASAP:ABE-0002678" /db_xref="UniProtKB/Swiss-Prot:P30749" /db_xref="EcoGene:EG11598" /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG DSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSA HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW" repeat_region 704484..704510 /note="REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 704610..705314 /gene="ybhL" /locus_tag="b0786" /gene_synonym="aceP" /gene_synonym="ECK0775" /gene_synonym="JW0769" /db_xref="EcoGene:EG13668" CDS 704610..705314 /gene="ybhL" /locus_tag="b0786" /gene_synonym="aceP" /gene_synonym="ECK0775" /gene_synonym="JW0769" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative acetate transporter; BAX Inhibitor-1 family inner membrane protein" /protein_id="AAC73873.1" /db_xref="GI:1787004" /db_xref="ASAP:ABE-0002685" /db_xref="UniProtKB/Swiss-Prot:P0AAC4" /db_xref="EcoGene:EG13668" /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD FINLFLMLLRIFGNRR" gene 705519..706232 /gene="ybhM" /locus_tag="b0787" /gene_synonym="ECK0776" /gene_synonym="JW0770" /db_xref="EcoGene:EG13669" CDS 705519..706232 /gene="ybhM" /locus_tag="b0787" /gene_synonym="ECK0776" /gene_synonym="JW0770" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="BAX Inhibitor-1 family inner membrane protein" /protein_id="AAC73874.1" /db_xref="GI:1787005" /db_xref="ASAP:ABE-0002688" /db_xref="UniProtKB/Swiss-Prot:P75769" /db_xref="EcoGene:EG13669" /translation="MESYSQNSNKLDFQHEARILNGIWLITALGLVATAGLAWGAKYI EITATKYDSPPMYVAIGLLLLCMYGLSKDINKINAAIAGVIYLFLLSLVAIVVASLVP VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP IWIISCLMIVLWSGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFG ILAAIAITLVWQRHTRFFH" gene complement(706268..707224) /gene="ybhN" /locus_tag="b0788" /gene_synonym="ECK0777" /gene_synonym="JW0771" /db_xref="EcoGene:EG13670" CDS complement(706268..707224) /gene="ybhN" /locus_tag="b0788" /gene_synonym="ECK0777" /gene_synonym="JW0771" /codon_start=1 /transl_table=11 /product="UPF0104 family inner membrane protein" /protein_id="AAC73875.1" /db_xref="GI:1787006" /db_xref="ASAP:ABE-0002690" /db_xref="UniProtKB/Swiss-Prot:P75770" /db_xref="EcoGene:EG13670" /translation="MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIR DYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTW VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVD QTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMV MGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGT IIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM" gene complement(707224..708465) /gene="clsB" /locus_tag="b0789" /gene_synonym="ECK0778" /gene_synonym="JW0772" /gene_synonym="ybhO" /db_xref="EcoGene:EG13671" CDS complement(707224..708465) /gene="clsB" /locus_tag="b0789" /gene_synonym="ECK0778" /gene_synonym="JW0772" /gene_synonym="ybhO" /EC_number="2.7.8.-" /function="Enzyme; Macromolecule synthesis: Phospholipids" /note="cardiolipin synthase activity; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="cardiolipin synthase 2" /protein_id="AAC73876.1" /db_xref="GI:1787007" /db_xref="ASAP:ABE-0002692" /db_xref="UniProtKB/Swiss-Prot:P0AA84" /db_xref="EcoGene:EG13671" /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE DDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLF GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDP PAQPTMETQDRVETENTGVKP" gene complement(708462..709223) /gene="ybhP" /locus_tag="b0790" /gene_synonym="ECK0779" /gene_synonym="JW0773" /db_xref="EcoGene:EG13672" CDS complement(708462..709223) /gene="ybhP" /locus_tag="b0790" /gene_synonym="ECK0779" /gene_synonym="JW0773" /note="GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="endo/exonuclease/phosphatase family protein" /protein_id="AAC73877.1" /db_xref="GI:1787008" /db_xref="ASAP:ABE-0002696" /db_xref="UniProtKB/Swiss-Prot:P0AAW1" /db_xref="EcoGene:EG13672" /translation="MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADI VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL" gene 709356..709766 /gene="ybhQ" /locus_tag="b0791" /gene_synonym="ECK0780" /gene_synonym="JW0774" /db_xref="EcoGene:EG13673" CDS 709356..709766 /gene="ybhQ" /locus_tag="b0791" /gene_synonym="ECK0780" /gene_synonym="JW0774" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC73878.1" /db_xref="GI:1787009" /db_xref="ASAP:ABE-0002699" /db_xref="UniProtKB/Swiss-Prot:P0AAW5" /db_xref="EcoGene:EG13673" /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR" gene complement(709728..710834) /gene="ybhR" /locus_tag="b0792" /gene_synonym="ECK0781" /gene_synonym="JW5803" /db_xref="EcoGene:EG13674" CDS complement(709728..710834) /gene="ybhR" /locus_tag="b0792" /gene_synonym="ECK0781" /gene_synonym="JW5803" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC73879.1" /db_xref="GI:1787010" /db_xref="ASAP:ABE-0002701" /db_xref="UniProtKB/Swiss-Prot:P0AFP9" /db_xref="EcoGene:EG13674" /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM" gene complement(710845..711978) /gene="ybhS" /locus_tag="b0793" /gene_synonym="ECK0782" /gene_synonym="JW0777" /db_xref="EcoGene:EG13675" CDS complement(710845..711978) /gene="ybhS" /locus_tag="b0793" /gene_synonym="ECK0782" /gene_synonym="JW0777" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC73880.1" /db_xref="GI:1787011" /db_xref="ASAP:ABE-0002703" /db_xref="UniProtKB/Swiss-Prot:P0AFQ2" /db_xref="EcoGene:EG13675" /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD" gene complement(711971..713707) /gene="ybhF" /locus_tag="b0794" /gene_synonym="ECK0783" /gene_synonym="JW5104" /db_xref="EcoGene:EG13314" CDS complement(711971..713707) /gene="ybhF" /locus_tag="b0794" /gene_synonym="ECK0783" /gene_synonym="JW5104" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC73881.2" /db_xref="GI:87081782" /db_xref="ASAP:ABE-0002707" /db_xref="UniProtKB/Swiss-Prot:P0A9U1" /db_xref="EcoGene:EG13314" /translation="MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGA GKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL LLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ LIHDWDKEHSNE" gene complement(713700..714698) /gene="ybhG" /locus_tag="b0795" /gene_synonym="ECK0784" /gene_synonym="JW0779" /db_xref="EcoGene:EG13315" CDS complement(713700..714698) /gene="ybhG" /locus_tag="b0795" /gene_synonym="ECK0784" /gene_synonym="JW0779" /function="putative membrane; Not classified" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative membrane fusion protein (MFP) component of efflux pump, membrane anchor" /protein_id="AAC73882.1" /db_xref="GI:1787013" /db_xref="ASAP:ABE-0002709" /db_xref="UniProtKB/Swiss-Prot:P75777" /db_xref="EcoGene:EG13315" /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRT VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLML AGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE" gene complement(714698..715369) /gene="ybiH" /locus_tag="b0796" /gene_synonym="ECK0785" /gene_synonym="JW0780" /db_xref="EcoGene:EG12406" CDS complement(714698..715369) /gene="ybiH" /locus_tag="b0796" /gene_synonym="ECK0785" /gene_synonym="JW0780" /function="putative regulator; Not classified" /note="putative transcriptional regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DUF1956 domain-containing tetR family putative transcriptional regulator" /protein_id="AAC73883.2" /db_xref="GI:87081783" /db_xref="ASAP:ABE-0002711" /db_xref="UniProtKB/Swiss-Prot:P0ACU0" /db_xref="EcoGene:EG12406" /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQN IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL SQRSL" gene 715598..716962 /gene="rhlE" /locus_tag="b0797" /gene_synonym="ECK0786" /gene_synonym="JW0781" /db_xref="EcoGene:EG11235" CDS 715598..716962 /gene="rhlE" /locus_tag="b0797" /gene_synonym="ECK0786" /gene_synonym="JW0781" /function="putative enzyme; Not classified" /note="putative ATP-dependent RNA helicase; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="AAC73884.1" /db_xref="GI:1787016" /db_xref="ASAP:ABE-0002719" /db_xref="UniProtKB/Swiss-Prot:P25888" /db_xref="EcoGene:EG11235" /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP AAAQ" repeat_region 717015..717112 /note="RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(717194..717676) /gene="ybiA" /locus_tag="b0798" /gene_synonym="ECK0787" /gene_synonym="JW0783" /db_xref="EcoGene:EG11579" CDS complement(717194..717676) /gene="ybiA" /locus_tag="b0798" /gene_synonym="ECK0787" /gene_synonym="JW0783" /codon_start=1 /transl_table=11 /product="DUF1768 family protein" /protein_id="AAC73885.1" /db_xref="GI:1787017" /db_xref="ASAP:ABE-0002722" /db_xref="UniProtKB/Swiss-Prot:P30176" /db_xref="EcoGene:EG11579" /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALR AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK " gene 717796..719946 /gene="dinG" /locus_tag="b0799" /gene_synonym="ECK0788" /gene_synonym="JW0784" /gene_synonym="rarB" /db_xref="EcoGene:EG11357" CDS 717796..719946 /gene="dinG" /locus_tag="b0799" /gene_synonym="ECK0788" /gene_synonym="JW0784" /gene_synonym="rarB" /function="putative enzyme; DNA - replication, repair, restriction/modification" /note="probably ATP-dependent helicase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase" /protein_id="AAC73886.1" /db_xref="GI:1787018" /db_xref="ASAP:ABE-0002732" /db_xref="UniProtKB/Swiss-Prot:P27296" /db_xref="EcoGene:EG11357" /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVE PSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR" gene 719974..720936 /gene="ybiB" /locus_tag="b0800" /gene_synonym="ECK0789" /gene_synonym="JW0785" /db_xref="EcoGene:EG11580" CDS 719974..720936 /gene="ybiB" /locus_tag="b0800" /gene_synonym="ECK0789" /gene_synonym="JW0785" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 17895580" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="putative family 3 glycosyltransferase" /protein_id="AAC73887.1" /db_xref="GI:1787019" /db_xref="ASAP:ABE-0002734" /db_xref="UniProtKB/Swiss-Prot:P30177" /db_xref="EcoGene:EG11580" /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ WIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF" repeat_region 720948..720971 /note="REP76 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 721077..722162 /gene="ybiC" /locus_tag="b0801" /gene_synonym="ECK0790" /gene_synonym="JW0786" /db_xref="EcoGene:EG11581" CDS 721077..722162 /gene="ybiC" /locus_tag="b0801" /gene_synonym="ECK0790" /gene_synonym="JW0786" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="AAC73888.1" /db_xref="GI:1787020" /db_xref="ASAP:ABE-0002738" /db_xref="UniProtKB/Swiss-Prot:P30178" /db_xref="EcoGene:EG11581" /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG HDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGI EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII INPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGS WQAICDAARQIGMPEETLQAFCQQLAS" repeat_region 722265..722387 /note="REP77 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(722391..722651) /gene="ybiJ" /locus_tag="b0802" /gene_synonym="ECK0791" /gene_synonym="JW0787" /db_xref="EcoGene:EG12422" CDS complement(722391..722651) /gene="ybiJ" /locus_tag="b0802" /gene_synonym="ECK0791" /gene_synonym="JW0787" /codon_start=1 /transl_table=11 /product="DUF1471 family putative periplasmic protein" /protein_id="AAC73889.1" /db_xref="GI:1787021" /db_xref="ASAP:ABE-0002741" /db_xref="UniProtKB/Swiss-Prot:P0AAX3" /db_xref="EcoGene:EG12422" /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG ASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK" gene complement(722916..723182) /gene="ybiI" /locus_tag="b0803" /gene_synonym="ECK0792" /gene_synonym="JW0788" /db_xref="EcoGene:EG12421" CDS complement(722916..723182) /gene="ybiI" /locus_tag="b0803" /gene_synonym="ECK0792" /gene_synonym="JW0788" /codon_start=1 /transl_table=11 /product="DksA-type zinc finger protein" /protein_id="AAC73890.1" /db_xref="GI:1787022" /db_xref="ASAP:ABE-0002744" /db_xref="UniProtKB/Swiss-Prot:P41039" /db_xref="EcoGene:EG12421" /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGA PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR" gene complement(723256..723933) /gene="ybiX" /locus_tag="b0804" /gene_synonym="ECK0793" /gene_synonym="JW5105" /db_xref="EcoGene:EG13316" CDS complement(723256..723933) /gene="ybiX" /locus_tag="b0804" /gene_synonym="ECK0793" /gene_synonym="JW5105" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="Fe(II)-dependent oxygenase superfamily protein" /protein_id="AAC73891.2" /db_xref="GI:87081784" /db_xref="ASAP:ABE-0002746" /db_xref="UniProtKB/Swiss-Prot:P75779" /db_xref="EcoGene:EG13316" /translation="MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQ QVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVR SHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCV TPVTRGVRVASFMWIQSMIRDDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNL LREWSEI" gene complement(723975..726257) /gene="fiu" /locus_tag="b0805" /gene_synonym="ECK0794" /gene_synonym="JW0790" /gene_synonym="ybiL" /db_xref="EcoGene:EG13317" CDS complement(723975..726257) /gene="fiu" /locus_tag="b0805" /gene_synonym="ECK0794" /gene_synonym="JW0790" /gene_synonym="ybiL" /function="membrane; Outer membrane constituents" /note="ferric iron outer membrane transporter, TonB-dependent; siderophore receptor for ferri-dihydroxybenzoylserine, ferri-dihydroxybenzoate and other catecholate siderophores; surface receptor for colicins G, H, and E492; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="catecholate siderophore receptor" /protein_id="AAC73892.1" /db_xref="GI:1787024" /db_xref="ASAP:ABE-0002749" /db_xref="UniProtKB/Swiss-Prot:P75780" /db_xref="EcoGene:EG13317" /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVG AFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGE KTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSA PSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVK QDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGH DVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYA FDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPTGVAKGSPVTTVDTAK SGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKA NTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNI TPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGAR YIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKS GYRYHPGEPRTFLLTANMHF" gene complement(726522..726782) /gene="mcbA" /locus_tag="b0806" /gene_synonym="ECK0795" /gene_synonym="JW5106" /gene_synonym="ybiM" /db_xref="EcoGene:EG13318" CDS complement(726522..726782) /gene="mcbA" /locus_tag="b0806" /gene_synonym="ECK0795" /gene_synonym="JW5106" /gene_synonym="ybiM" /codon_start=1 /transl_table=11 /product="colanic acid mucoidy stimulation protein" /protein_id="AAC73893.2" /db_xref="GI:87081785" /db_xref="ASAP:ABE-0002753" /db_xref="UniProtKB/Swiss-Prot:P0AAX6" /db_xref="EcoGene:EG13318" /translation="MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATG ASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK" gene 727058..727984 /gene="rlmF" /locus_tag="b0807" /gene_synonym="ECK0796" /gene_synonym="JW5107" /gene_synonym="ybiN" /db_xref="EcoGene:EG13319" CDS 727058..727984 /gene="rlmF" /locus_tag="b0807" /gene_synonym="ECK0796" /gene_synonym="JW5107" /gene_synonym="ybiN" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(6)A1618 methyltransferase, SAM-dependent" /protein_id="AAC73894.2" /db_xref="GI:87081786" /db_xref="ASAP:ABE-0002757" /db_xref="UniProtKB/Swiss-Prot:P75782" /db_xref="EcoGene:EG13319" /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLR RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG QQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR" gene complement(727981..730206) /gene="ybiO" /locus_tag="b0808" /gene_synonym="ECK0797" /gene_synonym="JW5108" /db_xref="EcoGene:EG13320" CDS complement(727981..730206) /gene="ybiO" /locus_tag="b0808" /gene_synonym="ECK0797" /gene_synonym="JW5108" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, intermediate conductance" /protein_id="AAC73895.2" /db_xref="GI:87081787" /db_xref="ASAP:ABE-0002760" /db_xref="UniProtKB/Swiss-Prot:P75783" /db_xref="EcoGene:EG13320" /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL PLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIG YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL RVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPT L" repeat_region 730357..730455 /note="RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(730467..731189) /gene="glnQ" /locus_tag="b0809" /gene_synonym="ECK0798" /gene_synonym="JW0794" /db_xref="EcoGene:EG10389" CDS complement(730467..731189) /gene="glnQ" /locus_tag="b0809" /gene_synonym="ECK0798" /gene_synonym="JW0794" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of glutamine high-affinity transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006542 - glutamine biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="AAC73896.1" /db_xref="GI:1787029" /db_xref="ASAP:ABE-0002764" /db_xref="UniProtKB/Swiss-Prot:P10346" /db_xref="EcoGene:EG10389" /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG NPQVLIKNPPSQRLQEFLQHVS" gene complement(731186..731845) /gene="glnP" /locus_tag="b0810" /gene_synonym="ECK0799" /gene_synonym="JW0795" /db_xref="EcoGene:EG10388" CDS complement(731186..731845) /gene="glnP" /locus_tag="b0810" /gene_synonym="ECK0799" /gene_synonym="JW0795" /function="transport; Transport of small molecules: Amino acids, amines" /note="glutamine high-affinity transport system; membrane component; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006542 - glutamine biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="AAC73897.1" /db_xref="GI:1787030" /db_xref="ASAP:ABE-0002766" /db_xref="UniProtKB/Swiss-Prot:P0AEQ6" /db_xref="EcoGene:EG10388" /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI L" gene complement(731984..732730) /gene="glnH" /locus_tag="b0811" /gene_synonym="ECK0800" /gene_synonym="JW0796" /db_xref="EcoGene:EG10386" CDS complement(731984..732730) /gene="glnH" /locus_tag="b0811" /gene_synonym="ECK0800" /gene_synonym="JW0796" /function="transport; Transport of small molecules: Amino acids, amines" /note="periplasmic glutamine-binding protein; permease; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006542 - glutamine biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamine transporter subunit" /protein_id="AAC73898.1" /db_xref="GI:1787031" /db_xref="ASAP:ABE-0002771" /db_xref="UniProtKB/Swiss-Prot:P0AEQ3" /db_xref="EcoGene:EG10386" /translation="MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL RDKVNGALKTLRENGTYNEIYKKWFGTEPK" gene complement(733134..733637) /gene="dps" /locus_tag="b0812" /gene_synonym="ECK0801" /gene_synonym="JW0797" /gene_synonym="pexB" /gene_synonym="vtm" /db_xref="EcoGene:EG11415" CDS complement(733134..733637) /gene="dps" /locus_tag="b0812" /gene_synonym="ECK0801" /gene_synonym="JW0797" /gene_synonym="pexB" /gene_synonym="vtm" /function="regulator; Global regulatory functions" /note="global regulator, starvation conditions; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="Fe-binding and storage protein; stress-inducible DNA-binding protein" /protein_id="AAC73899.1" /db_xref="GI:1787032" /db_xref="ASAP:ABE-0002776" /db_xref="UniProtKB/Swiss-Prot:P0ABT2" /db_xref="EcoGene:EG11415" /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW FIESNIE" gene complement(733936..734823) /gene="rhtA" /locus_tag="b0813" /gene_synonym="ECK0802" /gene_synonym="JW0798" /gene_synonym="ybiF" /db_xref="EcoGene:EG12134" CDS complement(733936..734823) /gene="rhtA" /locus_tag="b0813" /gene_synonym="ECK0802" /gene_synonym="JW0798" /gene_synonym="ybiF" /function="putative membrane; Not classified" /note="putative transmembrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="threonine and homoserine efflux system" /protein_id="AAC73900.1" /db_xref="GI:1787033" /db_xref="ASAP:ABE-0002779" /db_xref="UniProtKB/Swiss-Prot:P0AA67" /db_xref="EcoGene:EG12134" /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS MGSTLTVRKESKIKELDIN" gene 735176..735691 /gene="ompX" /locus_tag="b0814" /gene_synonym="ECK0803" /gene_synonym="JW0799" /gene_synonym="ybiG" /db_xref="EcoGene:EG12135" CDS 735176..735691 /gene="ompX" /locus_tag="b0814" /gene_synonym="ECK0803" /gene_synonym="JW0799" /gene_synonym="ybiG" /function="membrane; Outer membrane constituents" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane protein X" /protein_id="AAC73901.1" /db_xref="GI:1787034" /db_xref="ASAP:ABE-0002784" /db_xref="UniProtKB/Swiss-Prot:P0A917" /db_xref="EcoGene:EG12135" /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV GTWIAGVGYRF" gene complement(735740..737323) /gene="opgE" /locus_tag="b0815" /gene_synonym="ECK0804" /gene_synonym="JW0800" /gene_synonym="ybiP" /db_xref="EcoGene:EG13321" CDS complement(735740..737323) /gene="opgE" /locus_tag="b0815" /gene_synonym="ECK0804" /gene_synonym="JW0800" /gene_synonym="ybiP" /function="putative enzyme; Not classified" /note="putative enzyme; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="OPG biosynthetic transmembrane phosphoethanolamine transferase" /protein_id="AAC73902.1" /db_xref="GI:1787035" /db_xref="ASAP:ABE-0002786" /db_xref="UniProtKB/Swiss-Prot:P75785" /db_xref="EcoGene:EG13321" /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF QLQKVDYNHLGTDIFDPKP" gene complement(737595..737723) /gene="mntS" /locus_tag="b4705" /gene_synonym="ECK4517" /gene_synonym="rybA" /db_xref="EcoGene:EG14500" CDS complement(737595..737723) /gene="mntS" /locus_tag="b4705" /gene_synonym="ECK4517" /gene_synonym="rybA" /codon_start=1 /transl_table=11 /product="Mn(2)-response protein, MntR-repressed" /protein_id="AHA50631.1" /db_xref="GI:558095102" /db_xref="UniProtKB/Swiss-Prot:P0DKB3" /db_xref="EcoGene:EG14500" /translation="MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK" gene 737909..738376 /gene="mntR" /locus_tag="b0817" /gene_synonym="ECK0807" /gene_synonym="JW0801" /gene_synonym="ybiQ" /db_xref="EcoGene:EG13322" CDS 737909..738376 /gene="mntR" /locus_tag="b0817" /gene_synonym="ECK0807" /gene_synonym="JW0801" /gene_synonym="ybiQ" /function="regulator; Not classified" /codon_start=1 /transl_table=11 /product="Mn(2+)-responsive manganese regulon transcriptional regulator" /protein_id="AAC73904.1" /db_xref="GI:1787038" /db_xref="ASAP:ABE-0002793" /db_xref="UniProtKB/Swiss-Prot:P0A9F1" /db_xref="EcoGene:EG13322" /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK" gene 738373..739491 /gene="ybiR" /locus_tag="b0818" /gene_synonym="ECK0808" /gene_synonym="JW0802" /db_xref="EcoGene:EG13323" CDS 738373..739491 /gene="ybiR" /locus_tag="b0818" /gene_synonym="ECK0808" /gene_synonym="JW0802" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73905.1" /db_xref="GI:1787039" /db_xref="ASAP:ABE-0002795" /db_xref="UniProtKB/Swiss-Prot:P75788" /db_xref="EcoGene:EG13323" /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI AQMAPLAGAMMLTLLLLCWCCFPGKAMQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLVWAVNVGGFGLLPGSLANLIA LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN" gene complement(739550..740470) /gene="ldtB" /locus_tag="b0819" /gene_synonym="ECK0809" /gene_synonym="JW0803" /gene_synonym="ybiS" /db_xref="EcoGene:EG13324" CDS complement(739550..740470) /gene="ldtB" /locus_tag="b0819" /gene_synonym="ECK0809" /gene_synonym="JW0803" /gene_synonym="ybiS" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase linking Lpp to murein" /protein_id="AAC73906.1" /db_xref="GI:1787040" /db_xref="ASAP:ABE-0002797" /db_xref="UniProtKB/Swiss-Prot:P0AAX8" /db_xref="EcoGene:EG13324" /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN" gene 740689..742281 /gene="ybiT" /locus_tag="b0820" /gene_synonym="ECK0810" /gene_synonym="JW0804" /db_xref="EcoGene:EG13325" CDS 740689..742281 /gene="ybiT" /locus_tag="b0820" /gene_synonym="ECK0810" /gene_synonym="JW0804" /function="putative factor; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="ABC-F family putative regulatory ATPase" /protein_id="AAC73907.1" /db_xref="GI:1787041" /db_xref="ASAP:ABE-0002801" /db_xref="UniProtKB/Swiss-Prot:P0A9U3" /db_xref="EcoGene:EG13325" /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHE YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI TPERVIDFSGNYEDYLRSKGIE" repeat_region 742342..742439 /note="RIP79 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(742522..743787) /gene="ybiU" /locus_tag="b0821" /gene_synonym="ECK0811" /gene_synonym="JW0805" /db_xref="EcoGene:EG13326" CDS complement(742522..743787) /gene="ybiU" /locus_tag="b0821" /gene_synonym="ECK0811" /gene_synonym="JW0805" /codon_start=1 /transl_table=11 /product="DUF1479 family protein" /protein_id="AAC73908.1" /db_xref="GI:1787042" /db_xref="ASAP:ABE-0002804" /db_xref="UniProtKB/Swiss-Prot:P75791" /db_xref="EcoGene:EG13326" /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW DQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQS FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP REDYETNWEGRFTLADLNIHGKRALGMDV" gene complement(743939..744754) /gene="ybiV" /locus_tag="b0822" /gene_synonym="ECK0812" /gene_synonym="JW0806" /gene_synonym="supH" /db_xref="EcoGene:EG13327" CDS complement(743939..744754) /gene="ybiV" /locus_tag="b0822" /gene_synonym="ECK0812" /gene_synonym="JW0806" /gene_synonym="supH" /codon_start=1 /transl_table=11 /product="sugar phosphatase; fructose-1-P/ribose-5-P/glucose-6-P phosphatase" /protein_id="AAC73909.1" /db_xref="GI:1787043" /db_xref="ASAP:ABE-0002807" /db_xref="UniProtKB/Swiss-Prot:P75792" /db_xref="EcoGene:EG13327" /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPL VIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS" gene complement(744900..747332) /gene="ybiW" /locus_tag="b0823" /gene_synonym="ECK0813" /gene_synonym="JW0807" /gene_synonym="pflF" /db_xref="EcoGene:EG13328" CDS complement(744900..747332) /gene="ybiW" /locus_tag="b0823" /gene_synonym="ECK0813" /gene_synonym="JW0807" /gene_synonym="pflF" /function="putative enzyme; Not classified" /note="GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="putative pyruvate formate lyase" /protein_id="AAC73910.1" /db_xref="GI:1787044" /db_xref="ASAP:ABE-0002810" /db_xref="UniProtKB/Swiss-Prot:P75793" /db_xref="EcoGene:EG13328" /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT SGDAHLAVNFPLLLEKGLDGLREEVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE HIERFAALAREMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQ IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSH SKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW GYRCTGMSFINFARVMLAALEGGHDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQI RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK LMILLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDA QDDIIARTEHML" gene complement(747338..748237) /gene="ybiY" /locus_tag="b0824" /gene_synonym="ECK0814" /gene_synonym="JW0808" /gene_synonym="pflE" /db_xref="EcoGene:EG13470" CDS complement(747338..748237) /gene="ybiY" /locus_tag="b0824" /gene_synonym="ECK0814" /gene_synonym="JW0808" /gene_synonym="pflE" /function="putative enzyme; Not classified" /note="GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="putative pyruvate formate lyase activating enzyme" /protein_id="AAC73911.2" /db_xref="GI:226510931" /db_xref="ASAP:ABE-0002812" /db_xref="UniProtKB/Swiss-Prot:P75794" /db_xref="EcoGene:EG13470" /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE VKSVEEIMTTVLRDKPFYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVETC LHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIR VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD APELLDFAQQYACQKGLTATLRG" gene 748368..749030 /gene="fsaA" /locus_tag="b0825" /gene_synonym="ECK0815" /gene_synonym="JW5109" /gene_synonym="mipB" /gene_synonym="ybiZ" /db_xref="EcoGene:EG13471" CDS 748368..749030 /gene="fsaA" /locus_tag="b0825" /gene_synonym="ECK0815" /gene_synonym="JW5109" /gene_synonym="mipB" /gene_synonym="ybiZ" /EC_number="4.1.2.-" /experiment="N-terminus verified by Edman degradation: PMID 11120740" /note="fructose-6-phosphate aldolase" /codon_start=1 /transl_table=11 /product="fructose-6-phosphate aldolase 1" /protein_id="AAC73912.2" /db_xref="GI:87081788" /db_xref="ASAP:ABE-0002818" /db_xref="UniProtKB/Swiss-Prot:P78055" /db_xref="EcoGene:EG13471" /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP QLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAE GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA KVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRT SI" repeat_region 749059..749096 /note="REP80 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(749106..749855) /gene="moeB" /locus_tag="b0826" /gene_synonym="chlN" /gene_synonym="ECK0816" /gene_synonym="JW0810" /db_xref="EcoGene:EG10154" CDS complement(749106..749855) /gene="moeB" /locus_tag="b0826" /gene_synonym="chlN" /gene_synonym="ECK0816" /gene_synonym="JW0810" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /note="molybdopterin biosynthesis; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin synthase sulfurylase" /protein_id="AAC73913.1" /db_xref="GI:1787048" /db_xref="ASAP:ABE-0002820" /db_xref="UniProtKB/Swiss-Prot:P12282" /db_xref="EcoGene:EG10154" /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKP ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ" gene complement(749855..751090) /gene="moeA" /locus_tag="b0827" /gene_synonym="bisB" /gene_synonym="chlE" /gene_synonym="ECK0817" /gene_synonym="JW0811" /gene_synonym="narE" /db_xref="EcoGene:EG10153" CDS complement(749855..751090) /gene="moeA" /locus_tag="b0827" /gene_synonym="bisB" /gene_synonym="chlE" /gene_synonym="ECK0817" /gene_synonym="JW0811" /gene_synonym="narE" /function="enzyme; Biosynthesis of cofactors, carriers: Molybdopterin" /note="molybdopterin biosynthesis; GO_process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process" /codon_start=1 /transl_table=11 /product="molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein" /protein_id="AAC73914.1" /db_xref="GI:1787049" /db_xref="ASAP:ABE-0002823" /db_xref="UniProtKB/Swiss-Prot:P12281" /db_xref="EcoGene:EG10153" /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA PVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN VEVGEWVEVEPFNALFGGL" gene 751294..752259 /gene="iaaA" /locus_tag="b0828" /gene_synonym="ECK0818" /gene_synonym="JW0812" /gene_synonym="spt" /gene_synonym="ybiK" /db_xref="EcoGene:EG12407" CDS 751294..752259 /gene="iaaA" /locus_tag="b0828" /gene_synonym="ECK0818" /gene_synonym="JW0812" /gene_synonym="spt" /gene_synonym="ybiK" /EC_number="3.5.1.1" /function="orf; Not classified" /note="putative asparaginase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="Isoaspartyl peptidase" /protein_id="AAC73915.1" /db_xref="GI:1787050" /db_xref="ASAP:ABE-0002828" /db_xref="UniProtKB/Swiss-Prot:P37595" /db_xref="EcoGene:EG12407" /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEG ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG LIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ" gene 752246..754117 /gene="gsiA" /locus_tag="b0829" /gene_synonym="ECK0819" /gene_synonym="JW5897" /gene_synonym="yliA" /db_xref="EcoGene:EG13472" CDS 752246..754117 /gene="gsiA" /locus_tag="b0829" /gene_synonym="ECK0819" /gene_synonym="JW5897" /gene_synonym="yliA" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="glutathione ABC transporter ATPase" /protein_id="AAC73916.2" /db_xref="GI:145693107" /db_xref="ASAP:ABE-0002830" /db_xref="UniProtKB/Swiss-Prot:P75796" /db_xref="EcoGene:EG13472" /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVR GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG AMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERV GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR" gene 754137..755675 /gene="gsiB" /locus_tag="b0830" /gene_synonym="ECK0820" /gene_synonym="JW5111" /gene_synonym="yliB" /db_xref="EcoGene:EG13473" CDS 754137..755675 /gene="gsiB" /locus_tag="b0830" /gene_synonym="ECK0820" /gene_synonym="JW5111" /gene_synonym="yliB" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="glutathione ABC transporter periplasmic binding protein" /protein_id="AAC73917.1" /db_xref="GI:1787052" /db_xref="ASAP:ABE-0002832" /db_xref="UniProtKB/Swiss-Prot:P75797" /db_xref="EcoGene:EG13473" /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH PATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI TWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVT QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED ADLQ" gene 755693..756613 /gene="gsiC" /locus_tag="b0831" /gene_synonym="ECK0821" /gene_synonym="JW0815" /gene_synonym="yliC" /db_xref="EcoGene:EG13474" CDS 755693..756613 /gene="gsiC" /locus_tag="b0831" /gene_synonym="ECK0821" /gene_synonym="JW0815" /gene_synonym="yliC" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="glutathione ABC transporter permease" /protein_id="AAC73918.1" /db_xref="GI:1787053" /db_xref="ASAP:ABE-0002834" /db_xref="UniProtKB/Swiss-Prot:P75798" /db_xref="EcoGene:EG13474" /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG WLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA EILLFSLEFILINLVVDVLYAAINPAIRYK" gene 756616..757527 /gene="gsiD" /locus_tag="b0832" /gene_synonym="ECK0822" /gene_synonym="JW0816" /gene_synonym="yliD" /db_xref="EcoGene:EG13475" CDS 756616..757527 /gene="gsiD" /locus_tag="b0832" /gene_synonym="ECK0822" /gene_synonym="JW0816" /gene_synonym="yliD" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="glutathione ABC transporter permease" /protein_id="AAC73919.1" /db_xref="GI:1787054" /db_xref="ASAP:ABE-0002836" /db_xref="UniProtKB/Swiss-Prot:P75799" /db_xref="EcoGene:EG13475" /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGT VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA LAIFLTVLAFNLLGDGLRDALDPKIKG" gene 757705..760053 /gene="yliE" /locus_tag="b0833" /gene_synonym="ECK0823" /gene_synonym="JW0817" /db_xref="EcoGene:EG13476" CDS 757705..760053 /gene="yliE" /locus_tag="b0833" /gene_synonym="ECK0823" /gene_synonym="JW0817" /codon_start=1 /transl_table=11 /product="putative membrane-anchored cyclic-di-GMP phosphodiesterase" /protein_id="AAC73920.1" /db_xref="GI:1787055" /db_xref="ASAP:ABE-0002839" /db_xref="UniProtKB/Swiss-Prot:P75800" /db_xref="EcoGene:EG13476" /translation="MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRAD SRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVL DDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSW NPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLF LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPG GNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIE ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAE GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE" gene 760061..761389 /gene="yliF" /locus_tag="b0834" /gene_synonym="ECK0824" /gene_synonym="JW0818" /db_xref="EcoGene:EG13477" CDS 760061..761389 /gene="yliF" /locus_tag="b0834" /gene_synonym="ECK0824" /gene_synonym="JW0818" /codon_start=1 /transl_table=11 /product="putative membrane-anchored diguanylate cyclase" /protein_id="AAC73921.1" /db_xref="GI:1787056" /db_xref="ASAP:ABE-0002841" /db_xref="UniProtKB/Swiss-Prot:P75801" /db_xref="EcoGene:EG13477" /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI VHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ" gene complement(761436..762761) /gene="rimO" /locus_tag="b0835" /gene_synonym="ECK0825" /gene_synonym="JW0819" /gene_synonym="yliG" /db_xref="EcoGene:EG13478" CDS complement(761436..762761) /gene="rimO" /locus_tag="b0835" /gene_synonym="ECK0825" /gene_synonym="JW0819" /gene_synonym="yliG" /codon_start=1 /transl_table=11 /product="ribosomal protein S12 methylthiotransferase" /protein_id="AAC73922.1" /db_xref="GI:1787057" /db_xref="ASAP:ABE-0002843" /db_xref="UniProtKB/Swiss-Prot:P0AEI4" /db_xref="EcoGene:EG13478" /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV" gene 762974..763357 /gene="bssR" /locus_tag="b0836" /gene_synonym="ECK0826" /gene_synonym="JW0820" /gene_synonym="yliH" /db_xref="EcoGene:EG13479" CDS 762974..763357 /gene="bssR" /locus_tag="b0836" /gene_synonym="ECK0826" /gene_synonym="JW0820" /gene_synonym="yliH" /function="putative factor; Not classified" /note="putative receptor" /codon_start=1 /transl_table=11 /product="repressor of biofilm formation by indole transport regulation" /protein_id="AAC73923.1" /db_xref="GI:1787059" /db_xref="ASAP:ABE-0002849" /db_xref="UniProtKB/Swiss-Prot:P0AAY1" /db_xref="EcoGene:EG13479" /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD KLENCLMSLTLSIQSLQKHAMLEKA" gene 763468..764583 /gene="yliI" /locus_tag="b0837" /gene_synonym="ECK0827" /gene_synonym="JW0821" /db_xref="EcoGene:EG13480" CDS 763468..764583 /gene="yliI" /locus_tag="b0837" /gene_synonym="ECK0827" /gene_synonym="JW0821" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="soluble aldose sugar dehydrogenase" /protein_id="AAC73924.1" /db_xref="GI:1787060" /db_xref="ASAP:ABE-0002852" /db_xref="UniProtKB/Swiss-Prot:P75804" /db_xref="EcoGene:EG13480" /translation="MHRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWL SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQG MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN" gene complement(764580..765206) /gene="gstB" /locus_tag="b0838" /gene_synonym="ECK0828" /gene_synonym="JW0822" /gene_synonym="yliJ" /db_xref="EcoGene:EG13481" CDS complement(764580..765206) /gene="gstB" /locus_tag="b0838" /gene_synonym="ECK0828" /gene_synonym="JW0822" /gene_synonym="yliJ" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /note="putative transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="AAC73925.2" /db_xref="GI:87081789" /db_xref="ASAP:ABE-0002855" /db_xref="UniProtKB/Swiss-Prot:P0ACA7" /db_xref="EcoGene:EG13481" /translation="MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADF LAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWA NQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFG VGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS" gene 765453..766655 /gene="dacC" /locus_tag="b0839" /gene_synonym="ECK0829" /gene_synonym="JW0823" /db_xref="EcoGene:EG10203" CDS 765453..766655 /gene="dacC" /locus_tag="b0839" /gene_synonym="ECK0829" /gene_synonym="JW0823" /EC_number="3.4.16.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a" /protein_id="AAC73926.1" /db_xref="GI:1787062" /db_xref="ASAP:ABE-0002860" /db_xref="UniProtKB/Swiss-Prot:P08506" /db_xref="EcoGene:EG10203" /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN PALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAK KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRVWDFVMMKFH QWFGSWFS" repeat_region 766666..766692 /note="REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(766702..767460) /gene="deoR" /locus_tag="b0840" /gene_synonym="ECK0830" /gene_synonym="JW0824" /gene_synonym="nucR" /db_xref="EcoGene:EG10223" CDS complement(766702..767460) /gene="deoR" /locus_tag="b0840" /gene_synonym="ECK0830" /gene_synonym="JW0824" /gene_synonym="nucR" /function="regulator; Salvage of nucleosides and nucleotides" /note="transcriptional repressor for deo operon, tsx, nupG; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx" /protein_id="AAC73927.1" /db_xref="GI:1787063" /db_xref="ASAP:ABE-0002862" /db_xref="UniProtKB/Swiss-Prot:P0ACK5" /db_xref="EcoGene:EG10223" /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN HSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA RMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY" gene complement(767518..768114) /gene="ybjG" /locus_tag="b0841" /gene_synonym="bcrC" /gene_synonym="ECK0831" /gene_synonym="JW5112" /db_xref="EcoGene:EG13676" CDS complement(767518..768114) /gene="ybjG" /locus_tag="b0841" /gene_synonym="bcrC" /gene_synonym="ECK0831" /gene_synonym="JW5112" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate phosphatase" /protein_id="AAC73928.1" /db_xref="GI:1787064" /db_xref="ASAP:ABE-0002865" /db_xref="UniProtKB/Swiss-Prot:P75806" /db_xref="EcoGene:EG13676" /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVV LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG CLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD" gene 768399..769631 /gene="mdfA" /locus_tag="b0842" /gene_synonym="cmlA" /gene_synonym="cmr" /gene_synonym="ECK0832" /gene_synonym="JW0826" /db_xref="EcoGene:EG13696" CDS 768399..769631 /gene="mdfA" /locus_tag="b0842" /gene_synonym="cmlA" /gene_synonym="cmr" /gene_synonym="ECK0832" /gene_synonym="JW0826" /function="transport; Transport of small molecules: Other" /note="proton motive force efflux pump; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="AAC73929.1" /db_xref="GI:1787065" /db_xref="ASAP:ABE-0002871" /db_xref="UniProtKB/Swiss-Prot:P0AEY8" /db_xref="EcoGene:EG13696" /translation="MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV EQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLA QNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV GAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKN GRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLA RLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGL VRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWL SLMVIFLKDKQMGNSHEG" gene complement(769672..769956) /gene="ybjH" /locus_tag="b0843" /gene_synonym="ECK0833" /gene_synonym="JW0827" /db_xref="EcoGene:EG13677" CDS complement(769672..769956) /gene="ybjH" /locus_tag="b0843" /gene_synonym="ECK0833" /gene_synonym="JW0827" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC73930.1" /db_xref="GI:1787066" /db_xref="ASAP:ABE-0002873" /db_xref="UniProtKB/Swiss-Prot:P0AAY4" /db_xref="EcoGene:EG13677" /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV PQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH" gene complement(770042..770857) /gene="ybjI" /locus_tag="b0844" /gene_synonym="ECK0834" /gene_synonym="JW5113" /db_xref="EcoGene:EG13678" CDS complement(770042..770857) /gene="ybjI" /locus_tag="b0844" /gene_synonym="ECK0834" /gene_synonym="JW5113" /EC_number="3.1.3.-" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /codon_start=1 /transl_table=11 /product="5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis" /protein_id="AAC73931.2" /db_xref="GI:87081790" /db_xref="ASAP:ABE-0002877" /db_xref="UniProtKB/Swiss-Prot:P75809" /db_xref="EcoGene:EG13678" /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFATVVEHLLTRPEV EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ VQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ" gene complement(770857..772065) /gene="ybjJ" /locus_tag="b0845" /gene_synonym="ECK0835" /gene_synonym="JW0829" /db_xref="EcoGene:EG13679" CDS complement(770857..772065) /gene="ybjJ" /locus_tag="b0845" /gene_synonym="ECK0835" /gene_synonym="JW0829" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator" /codon_start=1 /transl_table=11 /product="putative drug efflux MFS transporter, inner membrane protein" /protein_id="AAC73932.1" /db_xref="GI:1787068" /db_xref="ASAP:ABE-0002880" /db_xref="UniProtKB/Swiss-Prot:P75810" /db_xref="EcoGene:EG13679" /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGVPFYRDIQLL LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD TKTQTAMENS" gene 772149..772685 /gene="rcdA" /locus_tag="b0846" /gene_synonym="ECK0836" /gene_synonym="JW5114" /gene_synonym="rcdR" /gene_synonym="ybjK" /db_xref="EcoGene:EG13680" CDS 772149..772685 /gene="rcdA" /locus_tag="b0846" /gene_synonym="ECK0836" /gene_synonym="JW5114" /gene_synonym="rcdR" /gene_synonym="ybjK" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator of csgD and ybiJI; autoregulator" /protein_id="AAC73933.1" /db_xref="GI:1787069" /db_xref="ASAP:ABE-0002885" /db_xref="UniProtKB/Swiss-Prot:P75811" /db_xref="EcoGene:EG13680" /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDN MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD RKPLSREEILRMVERVAG" gene complement(772702..772780) /gene="rybB" /locus_tag="b4417" /gene_synonym="ECK0837" /gene_synonym="JWR0227" /gene_synonym="p25" /db_xref="EcoGene:EG31137" ncRNA complement(772702..772780) /ncRNA_class="antisense_RNA" /gene="rybB" /locus_tag="b4417" /gene_synonym="ECK0837" /gene_synonym="JWR0227" /gene_synonym="p25" /product="sRNA antisense regulator of ompC and ompW mRNA instability, Hfq-dependent" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047241" /db_xref="EcoGene:EG31137" gene complement(772860..774545) /gene="ybjL" /locus_tag="b0847" /gene_synonym="ECK0838" /gene_synonym="JW0831" /db_xref="EcoGene:EG13681" CDS complement(772860..774545) /gene="ybjL" /locus_tag="b0847" /gene_synonym="ECK0838" /gene_synonym="JW0831" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73934.1" /db_xref="GI:1787071" /db_xref="ASAP:ABE-0002887" /db_xref="UniProtKB/Swiss-Prot:P60869" /db_xref="EcoGene:EG13681" /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG" gene 774815..775192 /gene="ybjM" /locus_tag="b0848" /gene_synonym="ECK0839" /gene_synonym="JW0832" /db_xref="EcoGene:EG13682" CDS 774815..775192 /gene="ybjM" /locus_tag="b0848" /gene_synonym="ECK0839" /gene_synonym="JW0832" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC73935.1" /db_xref="GI:1787072" /db_xref="ASAP:ABE-0002891" /db_xref="UniProtKB/Swiss-Prot:P64439" /db_xref="EcoGene:EG13682" /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW CALGALCFLFISSLFKPQHRKNQ" gene complement(775222..775479) /gene="grxA" /locus_tag="b0849" /gene_synonym="ECK0840" /gene_synonym="grx" /gene_synonym="JW0833" /db_xref="EcoGene:EG10417" CDS complement(775222..775479) /gene="grxA" /locus_tag="b0849" /gene_synonym="ECK0840" /gene_synonym="grx" /gene_synonym="JW0833" /function="carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 6352262" /note="glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase" /codon_start=1 /transl_table=11 /product="glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)" /protein_id="AAC73936.1" /db_xref="GI:1787073" /db_xref="ASAP:ABE-0002893" /db_xref="UniProtKB/Swiss-Prot:P68688" /db_xref="EcoGene:EG10417" /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA" gene 775639..775926 /gene="ybjC" /locus_tag="b0850" /gene_synonym="ECK0841" /gene_synonym="JW0834" /db_xref="EcoGene:EG12842" CDS 775639..775926 /gene="ybjC" /locus_tag="b0850" /gene_synonym="ECK0841" /gene_synonym="JW0834" /codon_start=1 /transl_table=11 /product="DUF1418 family protein" /protein_id="AAC73937.1" /db_xref="GI:1787074" /db_xref="ASAP:ABE-0002898" /db_xref="UniProtKB/Swiss-Prot:P46119" /db_xref="EcoGene:EG12842" /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH" gene 775910..776632 /gene="nfsA" /locus_tag="b0851" /gene_synonym="ECK0842" /gene_synonym="JW0835" /gene_synonym="mda18" /gene_synonym="mdaA" /gene_synonym="snrA" /gene_synonym="ybjB" /db_xref="EcoGene:EG11261" CDS 775910..776632 /gene="nfsA" /locus_tag="b0851" /gene_synonym="ECK0842" /gene_synonym="JW0835" /gene_synonym="mda18" /gene_synonym="mdaA" /gene_synonym="snrA" /gene_synonym="ybjB" /EC_number="1.-.-.-" /function="phenotype; Not classified" /note="GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitroreductase A, NADPH-dependent, FMN-dependent" /protein_id="AAC73938.1" /db_xref="GI:1787075" /db_xref="ASAP:ABE-0002900" /db_xref="UniProtKB/Swiss-Prot:P17117" /db_xref="EcoGene:EG11261" /translation="MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQ CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL LGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP ADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR TIIKESRPFILDYLHKQGWATR" gene 776693..777595 /gene="rimK" /locus_tag="b0852" /gene_synonym="ECK0843" /gene_synonym="JW0836" /gene_synonym="nek" /db_xref="EcoGene:EG10852" CDS 776693..777595 /gene="rimK" /locus_tag="b0852" /gene_synonym="ECK0843" /gene_synonym="JW0836" /gene_synonym="nek" /function="structural component; Ribosomes - maturation and modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="ribosomal protein S6 modification protein" /protein_id="AAC73939.1" /db_xref="GI:1787076" /db_xref="ASAP:ABE-0002903" /db_xref="UniProtKB/Swiss-Prot:P0C0U4" /db_xref="EcoGene:EG10852" /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI DIAGKMIRWIERHATTEYCLKTGG" gene 777683..778159 /gene="ybjN" /locus_tag="b0853" /gene_synonym="ECK0844" /gene_synonym="JW0837" /db_xref="EcoGene:EG13683" CDS 777683..778159 /gene="ybjN" /locus_tag="b0853" /gene_synonym="ECK0844" /gene_synonym="JW0837" /function="putative regulator; Not classified" /note="putative sensory transduction regulator" /codon_start=1 /transl_table=11 /product="negative regulator of motility; multicopy suppressor of coaA(Ts)" /protein_id="AAC73940.1" /db_xref="GI:1787077" /db_xref="ASAP:ABE-0002910" /db_xref="UniProtKB/Swiss-Prot:P0AAY6" /db_xref="EcoGene:EG13683" /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH" gene 778510..779622 /gene="potF" /locus_tag="b0854" /gene_synonym="ECK0845" /gene_synonym="JW0838" /db_xref="EcoGene:EG11629" CDS 778510..779622 /gene="potF" /locus_tag="b0854" /gene_synonym="ECK0845" /gene_synonym="JW0838" /function="transport; Transport of small molecules: Amino acids, amines" /note="periplasmic putrescine-binding protein; permease protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0015847 - putrescine transport" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter periplasmic binding protein" /protein_id="AAC73941.1" /db_xref="GI:1787078" /db_xref="ASAP:ABE-0002913" /db_xref="UniProtKB/Swiss-Prot:P31133" /db_xref="EcoGene:EG11629" /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK" gene 779717..780850 /gene="potG" /locus_tag="b0855" /gene_synonym="ECK0846" /gene_synonym="JW5818" /db_xref="EcoGene:EG11630" CDS 779717..780850 /gene="potG" /locus_tag="b0855" /gene_synonym="ECK0846" /gene_synonym="JW5818" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of putrescine transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0015847 - putrescine transport" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter ATPase" /protein_id="AAC73942.2" /db_xref="GI:87081791" /db_xref="ASAP:ABE-0002915" /db_xref="UniProtKB/Swiss-Prot:P31134" /db_xref="EcoGene:EG11630" /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL FPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVAL ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERQEDGLVLDSPGLV HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV" gene 780860..781813 /gene="potH" /locus_tag="b0856" /gene_synonym="ECK0847" /gene_synonym="JW0840" /db_xref="EcoGene:EG11631" CDS 780860..781813 /gene="potH" /locus_tag="b0856" /gene_synonym="ECK0847" /gene_synonym="JW0840" /function="transport; Transport of small molecules: Amino acids, amines" /note="putrescine transport protein; permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0015847 - putrescine transport" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter permease" /protein_id="AAC73943.1" /db_xref="GI:1787080" /db_xref="ASAP:ABE-0002917" /db_xref="UniProtKB/Swiss-Prot:P31135" /db_xref="EcoGene:EG11631" /translation="MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ EFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG" gene 781810..782655 /gene="potI" /locus_tag="b0857" /gene_synonym="ECK0848" /gene_synonym="JW0841" /db_xref="EcoGene:EG11632" CDS 781810..782655 /gene="potI" /locus_tag="b0857" /gene_synonym="ECK0848" /gene_synonym="JW0841" /function="transport; Transport of small molecules: Amino acids, amines" /note="putrescine transport protein; permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0015847 - putrescine transport" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter permease" /protein_id="AAC73944.1" /db_xref="GI:1787081" /db_xref="ASAP:ABE-0002919" /db_xref="UniProtKB/Swiss-Prot:P0AFL1" /db_xref="EcoGene:EG11632" /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ RARRG" gene 782715..783203 /gene="ybjO" /locus_tag="b0858" /gene_synonym="ECK0849" /gene_synonym="JW0842" /db_xref="EcoGene:EG13684" CDS 782715..783203 /gene="ybjO" /locus_tag="b0858" /gene_synonym="ECK0849" /gene_synonym="JW0842" /codon_start=1 /transl_table=11 /product="DUF2593 family inner membrane protein" /protein_id="AAC73945.1" /db_xref="GI:1787082" /db_xref="ASAP:ABE-0002922" /db_xref="UniProtKB/Swiss-Prot:P0AAZ0" /db_xref="EcoGene:EG13684" /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ LQ" gene 783244..784371 /gene="rlmC" /locus_tag="b0859" /gene_synonym="ECK0850" /gene_synonym="JW0843" /gene_synonym="rumB" /gene_synonym="ybjF" /db_xref="EcoGene:EG13427" CDS 783244..784371 /gene="rlmC" /locus_tag="b0859" /gene_synonym="ECK0850" /gene_synonym="JW0843" /gene_synonym="rumB" /gene_synonym="ybjF" /EC_number="2.1.1.-" /function="enzyme; rRNA modification" /note="putative enzyme; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(5)U747 methyltransferase, SAM-dependent" /protein_id="AAC73946.1" /db_xref="GI:1787083" /db_xref="ASAP:ABE-0002924" /db_xref="UniProtKB/Swiss-Prot:P75817" /db_xref="EcoGene:EG13427" /translation="MQCALYDAGRCRSCQWIMQPIPEQLSAKTADLKNLLADFPVEEW CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHE QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAA ELGLTRLQFQALDSTQFATAQGDVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ" repeat_region 784422..784519 /note="RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(784570..785301) /gene="artJ" /locus_tag="b0860" /gene_synonym="ECK0851" /gene_synonym="JW0844" /db_xref="EcoGene:EG11628" CDS complement(784570..785301) /gene="artJ" /locus_tag="b0860" /gene_synonym="ECK0851" /gene_synonym="JW0844" /function="transport; Transport of small molecules: Amino acids, amines" /note="arginine 3rd transport system periplasmic binding protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="arginine ABC transporter periplasmic binding protein" /protein_id="AAC73947.1" /db_xref="GI:1787085" /db_xref="ASAP:ABE-0002927" /db_xref="UniProtKB/Swiss-Prot:P30860" /db_xref="EcoGene:EG11628" /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE KLNNALAAIKADGTYQKISDQWFPQ" repeat_region 785475..785561 /note="REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(785592..786260) /gene="artM" /locus_tag="b0861" /gene_synonym="ECK0852" /gene_synonym="JW0845" /db_xref="EcoGene:EG11627" CDS complement(785592..786260) /gene="artM" /locus_tag="b0861" /gene_synonym="ECK0852" /gene_synonym="JW0845" /function="transport; Transport of small molecules: Amino acids, amines" /note="arginine 3rd transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="arginine ABC transporter permease" /protein_id="AAC73948.1" /db_xref="GI:1787086" /db_xref="ASAP:ABE-0002931" /db_xref="UniProtKB/Swiss-Prot:P0AE30" /db_xref="EcoGene:EG11627" /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF ERRN" gene complement(786260..786976) /gene="artQ" /locus_tag="b0862" /gene_synonym="ECK0853" /gene_synonym="JW0846" /db_xref="EcoGene:EG11626" CDS complement(786260..786976) /gene="artQ" /locus_tag="b0862" /gene_synonym="ECK0853" /gene_synonym="JW0846" /function="transport; Transport of small molecules: Amino acids, amines" /note="arginine 3rd transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="arginine ABC transporter permease" /protein_id="AAC73949.1" /db_xref="GI:1787087" /db_xref="ASAP:ABE-0002933" /db_xref="UniProtKB/Swiss-Prot:P0AE34" /db_xref="EcoGene:EG11626" /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVA WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL SQYILKRIDLRATRFERRPS" gene complement(786983..787714) /gene="artI" /locus_tag="b0863" /gene_synonym="ECK0854" /gene_synonym="JW0847" /db_xref="EcoGene:EG11625" CDS complement(786983..787714) /gene="artI" /locus_tag="b0863" /gene_synonym="ECK0854" /gene_synonym="JW0847" /function="transport; Transport of small molecules: Amino acids, amines" /note="arginine 3rd transport system periplasmic binding protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006542 - glutamine biosynthetic process" /codon_start=1 /transl_table=11 /product="arginine transporter subunit" /protein_id="AAC73950.1" /db_xref="GI:1787088" /db_xref="ASAP:ABE-0002937" /db_xref="UniProtKB/Swiss-Prot:P30859" /db_xref="EcoGene:EG11625" /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ KLNTALEKVKKDGTYETIYNKWFQK" gene complement(787732..788460) /gene="artP" /locus_tag="b0864" /gene_synonym="ECK0855" /gene_synonym="JW0848" /db_xref="EcoGene:EG11624" CDS complement(787732..788460) /gene="artP" /locus_tag="b0864" /gene_synonym="ECK0855" /gene_synonym="JW0848" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of 3rd arginine transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="arginine ABC transporter ATPase" /protein_id="AAC73951.1" /db_xref="GI:1787089" /db_xref="ASAP:ABE-0002939" /db_xref="UniProtKB/Swiss-Prot:P0AAF6" /db_xref="EcoGene:EG11624" /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH IVEQGDASCFTEPQTEAFKNYLSH" gene complement(788678..789193) /gene="ybjP" /locus_tag="b0865" /gene_synonym="ECK0856" /gene_synonym="JW0849" /db_xref="EcoGene:EG13685" CDS complement(788678..789193) /gene="ybjP" /locus_tag="b0865" /gene_synonym="ECK0856" /gene_synonym="JW0849" /function="putative enzyme; Not classified" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC73952.1" /db_xref="GI:1787090" /db_xref="ASAP:ABE-0002941" /db_xref="UniProtKB/Swiss-Prot:P75818" /db_xref="EcoGene:EG13685" /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNV AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDS AHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHAT AGTLRQSIENR" gene 789319..789642 /gene="ybjQ" /locus_tag="b0866" /gene_synonym="ECK0857" /gene_synonym="JW0850" /db_xref="EcoGene:EG13686" CDS 789319..789642 /gene="ybjQ" /locus_tag="b0866" /gene_synonym="ECK0857" /gene_synonym="JW0850" /codon_start=1 /transl_table=11 /product="UPF0145 family protein" /protein_id="AAC73953.1" /db_xref="GI:1787091" /db_xref="ASAP:ABE-0002945" /db_xref="UniProtKB/Swiss-Prot:P0A8C1" /db_xref="EcoGene:EG13686" /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA VKTRR" gene 789639..790469 /gene="amiD" /locus_tag="b0867" /gene_synonym="ECK0858" /gene_synonym="JW0851" /gene_synonym="ybjR" /db_xref="EcoGene:EG13687" CDS 789639..790469 /gene="amiD" /locus_tag="b0867" /gene_synonym="ECK0858" /gene_synonym="JW0851" /gene_synonym="ybjR" /function="putative regulator; Not classified" /codon_start=1 /transl_table=11 /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein" /protein_id="AAC73954.1" /db_xref="GI:1787092" /db_xref="ASAP:ABE-0002947" /db_xref="UniProtKB/Swiss-Prot:P75820" /db_xref="EcoGene:EG13687" /translation="MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD " gene complement(790466..791479) /gene="ybjS" /locus_tag="b0868" /gene_synonym="ECK0859" /gene_synonym="JW5819" /db_xref="EcoGene:EG13688" CDS complement(790466..791479) /gene="ybjS" /locus_tag="b0868" /gene_synonym="ECK0859" /gene_synonym="JW5819" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative NAD(P)H-dependent oxidoreductase" /protein_id="AAC73955.2" /db_xref="GI:87081792" /db_xref="ASAP:ABE-0002949" /db_xref="UniProtKB/Swiss-Prot:P75821" /db_xref="EcoGene:EG13688" /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQ TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA SQEACDKLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER LGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGK LPR" gene complement(791578..793008) /gene="ybjT" /locus_tag="b0869" /gene_synonym="ECK0860" /gene_synonym="JW5116" /db_xref="EcoGene:EG13689" CDS complement(791578..793008) /gene="ybjT" /locus_tag="b0869" /gene_synonym="ECK0860" /gene_synonym="JW5116" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative NAD-dependent oxidoreductase" /protein_id="AAC73956.2" /db_xref="GI:87081793" /db_xref="ASAP:ABE-0002951" /db_xref="UniProtKB/Swiss-Prot:P75822" /db_xref="EcoGene:EG13689" /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL LMIPAHLFIFRGMAKQIARLAEQSTD" gene complement(793019..794020) /gene="ltaE" /locus_tag="b0870" /gene_synonym="ECK0861" /gene_synonym="JW0854" /gene_synonym="ltaA" /gene_synonym="ybjU" /db_xref="EcoGene:EG13690" CDS complement(793019..794020) /gene="ltaE" /locus_tag="b0870" /gene_synonym="ECK0861" /gene_synonym="JW0854" /gene_synonym="ltaA" /gene_synonym="ybjU" /EC_number="4.1.2.5" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9692922" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006545 - glycine biosynthetic process" /codon_start=1 /transl_table=11 /product="L-allo-threonine aldolase, PLP-dependent" /protein_id="AAC73957.1" /db_xref="GI:1787095" /db_xref="ASAP:ABE-0002954" /db_xref="UniProtKB/Swiss-Prot:P75823" /db_xref="EcoGene:EG13690" /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI RWRKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN MLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR" gene complement(794057..795775) /gene="poxB" /locus_tag="b0871" /gene_synonym="ECK0862" /gene_synonym="JW0855" /db_xref="EcoGene:EG10754" CDS complement(794057..795775) /gene="poxB" /locus_tag="b0871" /gene_synonym="ECK0862" /gene_synonym="JW0855" /EC_number="1.2.5.1" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3902830" /note="pyruvate oxidase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0042867 - pyruvate catabolic process" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding" /protein_id="AAC73958.1" /db_xref="GI:1787096" /db_xref="ASAP:ABE-0002958" /db_xref="UniProtKB/Swiss-Prot:P07003" /db_xref="EcoGene:EG10754" /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP GDVALKPAPEGATMHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA KTNWLR" repeat_region 795873..795898 /note="REP84 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(795908..796876) /gene="hcr" /locus_tag="b0872" /gene_synonym="ECK0863" /gene_synonym="JW5117" /gene_synonym="ybjV" /db_xref="EcoGene:EG13691" CDS complement(795908..796876) /gene="hcr" /locus_tag="b0872" /gene_synonym="ECK0863" /gene_synonym="JW5117" /gene_synonym="ybjV" /EC_number="1.-.-.-" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="HCP oxidoreductase, NADH-dependent" /protein_id="AAC73959.1" /db_xref="GI:1787098" /db_xref="ASAP:ABE-0002960" /db_xref="UniProtKB/Swiss-Prot:P75824" /db_xref="EcoGene:EG13691" /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA" gene complement(796888..798540) /gene="hcp" /locus_tag="b0873" /gene_synonym="ECK0864" /gene_synonym="JW0857" /gene_synonym="ybjW" /db_xref="EcoGene:EG13692" CDS complement(796888..798540) /gene="hcp" /locus_tag="b0873" /gene_synonym="ECK0864" /gene_synonym="JW0857" /gene_synonym="ybjW" /function="orf; Not classified" /codon_start=1 /transl_table=11 /product="hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases" /protein_id="AAC73960.2" /db_xref="GI:87081794" /db_xref="ASAP:ABE-0002962" /db_xref="UniProtKB/Swiss-Prot:P75825" /db_xref="EcoGene:EG13692" /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRS IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS REKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLP RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA" gene complement(798684..799583) /gene="ybjE" /locus_tag="b0874" /gene_synonym="ECK0865" /gene_synonym="JW0858" /db_xref="EcoGene:EG13426" CDS complement(798684..799583) /gene="ybjE" /locus_tag="b0874" /gene_synonym="ECK0865" /gene_synonym="JW0858" /function="putative structure; Not classified" /note="putative surface protein" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73961.2" /db_xref="GI:87081795" /db_xref="ASAP:ABE-0002966" /db_xref="UniProtKB/Swiss-Prot:P75826" /db_xref="EcoGene:EG13426" /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV PAAIVHGFILSLLVPILIAFFSA" gene complement(800078..800773) /gene="aqpZ" /locus_tag="b0875" /gene_synonym="bniP" /gene_synonym="ECK0866" /gene_synonym="JW0859" /db_xref="EcoGene:EG13270" CDS complement(800078..800773) /gene="aqpZ" /locus_tag="b0875" /gene_synonym="bniP" /gene_synonym="ECK0866" /gene_synonym="JW0859" /function="transport; Transport of small molecules: Other" /note="transmembrane water channel; aquaporin Z; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="aquaporin Z" /protein_id="AAC73962.1" /db_xref="GI:1787101" /db_xref="ASAP:ABE-0002976" /db_xref="UniProtKB/Swiss-Prot:P60844" /db_xref="EcoGene:EG13270" /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII GGLIYRTLLEKRD" gene 801199..802857 /gene="ybjD" /locus_tag="b0876" /gene_synonym="ECK0867" /gene_synonym="JW0860" /db_xref="EcoGene:EG13425" CDS 801199..802857 /gene="ybjD" /locus_tag="b0876" /gene_synonym="ECK0867" /gene_synonym="JW0860" /codon_start=1 /transl_table=11 /product="putative OLD family ATP-dependent endonuclease; DUF2813 family protein" /protein_id="AAC73963.1" /db_xref="GI:1787102" /db_xref="ASAP:ABE-0002980" /db_xref="UniProtKB/Swiss-Prot:P75828" /db_xref="EcoGene:EG13425" /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAI HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD" gene complement(802854..803846) /gene="ybjX" /locus_tag="b0877" /gene_synonym="ECK0868" /gene_synonym="JW0861" /db_xref="EcoGene:EG13693" CDS complement(802854..803846) /gene="ybjX" /locus_tag="b0877" /gene_synonym="ECK0868" /gene_synonym="JW0861" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="DUF535 family protein" /protein_id="AAC73964.1" /db_xref="GI:1787103" /db_xref="ASAP:ABE-0002982" /db_xref="UniProtKB/Swiss-Prot:P75829" /db_xref="EcoGene:EG13693" /translation="MVKSTPCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCR PGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLA ANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMI SMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATK ACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWE SVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG" gene 803961..805076 /gene="macA" /locus_tag="b0878" /gene_synonym="ECK0869" /gene_synonym="JW0862" /gene_synonym="ybjY" /db_xref="EcoGene:EG13694" CDS 803961..805076 /gene="macA" /locus_tag="b0878" /gene_synonym="ECK0869" /gene_synonym="JW0862" /gene_synonym="ybjY" /function="putative membrane; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 17214741" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="macrolide transporter membrane fusion protein (MFP) component" /protein_id="AAC73965.2" /db_xref="GI:87081796" /db_xref="ASAP:ABE-0002986" /db_xref="UniProtKB/Swiss-Prot:P75830" /db_xref="EcoGene:EG13694" /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQI GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA DMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ" gene 805073..807019 /gene="macB" /locus_tag="b0879" /gene_synonym="ECK0870" /gene_synonym="JW0863" /gene_synonym="ybjZ" /db_xref="EcoGene:EG13695" CDS 805073..807019 /gene="macB" /locus_tag="b0879" /gene_synonym="ECK0870" /gene_synonym="JW0863" /gene_synonym="ybjZ" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="macrolide ABC transporter peremase/ATPase" /protein_id="AAC73966.1" /db_xref="GI:1787105" /db_xref="ASAP:ABE-0002989" /db_xref="UniProtKB/Swiss-Prot:P75831" /db_xref="EcoGene:EG13695" /translation="MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASG SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD GEIVRNPPAIEKVNVTGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVT GILFGWLPARNAARLDPVDALARE" gene complement(807092..807316) /gene="cspD" /locus_tag="b0880" /gene_synonym="cspH" /gene_synonym="ECK0871" /gene_synonym="JW0864" /gene_synonym="ybjA" /db_xref="EcoGene:EG11111" CDS complement(807092..807316) /gene="cspD" /locus_tag="b0880" /gene_synonym="cspH" /gene_synonym="ECK0871" /gene_synonym="JW0864" /gene_synonym="ybjA" /function="phenotype; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /note="stress induced DNA replication inhibitor; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="inhibitor of DNA replication, cold shock protein homolog" /protein_id="AAC73967.1" /db_xref="GI:1787107" /db_xref="ASAP:ABE-0002991" /db_xref="UniProtKB/Swiss-Prot:P0A968" /db_xref="EcoGene:EG11111" /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA GQSVQFDVHQGPKGNHASVIVPVEVEAAVA" gene 807639..807959 /gene="clpS" /locus_tag="b0881" /gene_synonym="ECK0872" /gene_synonym="JW0865" /gene_synonym="yljA" /db_xref="EcoGene:EG14241" CDS 807639..807959 /gene="clpS" /locus_tag="b0881" /gene_synonym="ECK0872" /gene_synonym="JW0865" /gene_synonym="yljA" /codon_start=1 /transl_table=11 /product="regulatory protein for ClpA substrate specificity" /protein_id="AAC73968.1" /db_xref="GI:1787108" /db_xref="ASAP:ABE-0002998" /db_xref="UniProtKB/Swiss-Prot:P0A8Q6" /db_xref="EcoGene:EG14241" /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT LEKA" gene 807990..810266 /gene="clpA" /locus_tag="b0882" /gene_synonym="ECK0873" /gene_synonym="JW0866" /gene_synonym="lopD" /db_xref="EcoGene:EG10156" CDS 807990..810266 /gene="clpA" /locus_tag="b0882" /gene_synonym="ECK0873" /gene_synonym="JW0866" /gene_synonym="lopD" /function="enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 3049606" /note="ATP-binding component of serine protease; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity" /protein_id="AAC73969.1" /db_xref="GI:1787109" /db_xref="ASAP:ABE-0003001" /db_xref="UniProtKB/Swiss-Prot:P0ABH9" /db_xref="EcoGene:EG10156" /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN ELTYGFQSAQKHKAEAAH" gene complement(810610..810697) /gene="serW" /locus_tag="b0883" /gene_synonym="ECK0874" /gene_synonym="JWR0025" /db_xref="EcoGene:EG30096" tRNA complement(810610..810697) /gene="serW" /locus_tag="b0883" /gene_synonym="ECK0874" /gene_synonym="JWR0025" /product="tRNA-Ser" /note="anticodon: GGA" /db_xref="ASAP:ABE-0003003" /db_xref="EcoGene:EG30096" gene complement(810951..811169) /gene="infA" /locus_tag="b0884" /gene_synonym="bypA1" /gene_synonym="ECK0875" /gene_synonym="JW0867" /db_xref="EcoGene:EG10504" CDS complement(810951..811169) /gene="infA" /locus_tag="b0884" /gene_synonym="bypA1" /gene_synonym="ECK0875" /gene_synonym="JW0867" /function="factor; Proteins - translation and modification" /note="protein chain initiation factor IF-1; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="AAC73970.1" /db_xref="GI:1787110" /db_xref="ASAP:ABE-0003005" /db_xref="UniProtKB/Swiss-Prot:P69222" /db_xref="EcoGene:EG10504" /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY IRILTGDKVTVELTPYDLSKGRIVFRSR" gene complement(811454..812158) /gene="aat" /locus_tag="b0885" /gene_synonym="ECK0876" /gene_synonym="JW0868" /gene_synonym="ycaA" /db_xref="EcoGene:EG11112" CDS complement(811454..812158) /gene="aat" /locus_tag="b0885" /gene_synonym="ECK0876" /gene_synonym="JW0868" /gene_synonym="ycaA" /EC_number="2.3.2.6" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="leucyl, phenylalanyl-tRNA-protein transferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006508 - proteolysis" /codon_start=1 /transl_table=11 /product="leucyl/phenylalanyl-tRNA-protein transferase" /protein_id="AAC73971.1" /db_xref="GI:1787111" /db_xref="ASAP:ABE-0003009" /db_xref="UniProtKB/Swiss-Prot:P0A8P1" /db_xref="EcoGene:EG11112" /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR LPNNFWVPRCLFSPQE" gene complement(812200..813921) /gene="cydC" /locus_tag="b0886" /gene_synonym="ECK0877" /gene_synonym="JW0869" /gene_synonym="mdrA" /gene_synonym="mdrH" /gene_synonym="surB" /gene_synonym="ycaB" /db_xref="EcoGene:EG10012" CDS complement(812200..813921) /gene="cydC" /locus_tag="b0886" /gene_synonym="ECK0877" /gene_synonym="JW0869" /gene_synonym="mdrA" /gene_synonym="mdrH" /gene_synonym="surB" /gene_synonym="ycaB" /function="transport; Transport of small molecules: Other" /note="ATP-binding component of cytochrome-related transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="glutathione/cysteine ABC transporter export permease/ATPase" /protein_id="AAC73972.1" /db_xref="GI:1787112" /db_xref="ASAP:ABE-0003012" /db_xref="UniProtKB/Swiss-Prot:P23886" /db_xref="EcoGene:EG10012" /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDF TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVA DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDP QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEIL RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY YQFKQGL" gene complement(813922..815688) /gene="cydD" /locus_tag="b0887" /gene_synonym="ECK0878" /gene_synonym="htrD" /gene_synonym="JW0870" /db_xref="EcoGene:EG11405" CDS complement(813922..815688) /gene="cydD" /locus_tag="b0887" /gene_synonym="ECK0878" /gene_synonym="htrD" /gene_synonym="JW0870" /function="transport; Not classified" /note="ATP-binding component of cytochrome-related transport, Zn sensitive; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="glutathione/cysteine ABC transporter export permease/ATPase" /protein_id="AAC73973.1" /db_xref="GI:1787113" /db_xref="ASAP:ABE-0003015" /db_xref="UniProtKB/Swiss-Prot:P29018" /db_xref="EcoGene:EG11405" /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH PQRGEAELASTDPVTIEAEELFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA SEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR YAELSVAGGPFATLLAHRQEEI" gene complement(815811..816776) /gene="trxB" /locus_tag="b0888" /gene_synonym="ECK0879" /gene_synonym="JW0871" /db_xref="EcoGene:EG11032" CDS complement(815811..816776) /gene="trxB" /locus_tag="b0888" /gene_synonym="ECK0879" /gene_synonym="JW0871" /EC_number="1.8.1.9" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /note="thioredoxin reductase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="thioredoxin reductase, FAD/NAD(P)-binding" /protein_id="AAC73974.1" /db_xref="GI:1787114" /db_xref="ASAP:ABE-0003018" /db_xref="UniProtKB/Swiss-Prot:P0A9P4" /db_xref="EcoGene:EG11032" /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK" gene 817321..817815 /gene="lrp" /locus_tag="b0889" /gene_synonym="alsB" /gene_synonym="ECK0880" /gene_synonym="ihb" /gene_synonym="JW0872" /gene_synonym="livR" /gene_synonym="lrs" /gene_synonym="lss" /gene_synonym="lstR" /gene_synonym="mbf" /gene_synonym="oppI" /gene_synonym="rblA" /db_xref="EcoGene:EG10547" CDS 817321..817815 /gene="lrp" /locus_tag="b0889" /gene_synonym="alsB" /gene_synonym="ECK0880" /gene_synonym="ihb" /gene_synonym="JW0872" /gene_synonym="livR" /gene_synonym="lrs" /gene_synonym="lss" /gene_synonym="lstR" /gene_synonym="mbf" /gene_synonym="oppI" /gene_synonym="rblA" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009098 - leucine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="leucine-responsive global transcriptional regulator" /protein_id="AAC73975.1" /db_xref="GI:1787116" /db_xref="ASAP:ABE-0003023" /db_xref="UniProtKB/Swiss-Prot:P0ACJ0" /db_xref="EcoGene:EG10547" /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV IKTR" gene 817950..821939 /gene="ftsK" /locus_tag="b0890" /gene_synonym="dinH" /gene_synonym="ECK0881" /gene_synonym="JW0873" /db_xref="EcoGene:EG13226" CDS 817950..821939 /gene="ftsK" /locus_tag="b0890" /gene_synonym="dinH" /gene_synonym="ECK0881" /gene_synonym="JW0873" /function="phenotype; Cell division" /note="cell division protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA translocase at septal ring sorting daughter chromsomes" /protein_id="AAC73976.1" /db_xref="GI:1787117" /db_xref="ASAP:ABE-0003027" /db_xref="UniProtKB/Swiss-Prot:P46889" /db_xref="EcoGene:EG13226" /translation="MSQEYIEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDE EITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA APVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQ YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQ TEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRARERE QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAA TVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKA REAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAA EAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQ QPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPV APQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPV DTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLA RSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDI AGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELS VYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRM MRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKAR AAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDM LYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGA EELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNR EVLAPPPFD" repeat_region 821950..821985 /note="REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 822098..822709 /gene="lolA" /locus_tag="b0891" /gene_synonym="ECK0882" /gene_synonym="JW0874" /gene_synonym="lplA" /gene_synonym="yzzV" /db_xref="EcoGene:EG12684" CDS 822098..822709 /gene="lolA" /locus_tag="b0891" /gene_synonym="ECK0882" /gene_synonym="JW0874" /gene_synonym="lplA" /gene_synonym="yzzV" /function="transport; Protein, peptide secretion" /note="periplasmic protein effects translocation of lipoproteins from inner membrane to outer; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="lipoprotein chaperone" /protein_id="AAC73977.2" /db_xref="GI:145693108" /db_xref="ASAP:ABE-0003031" /db_xref="UniProtKB/Swiss-Prot:P61316" /db_xref="EcoGene:EG12684" /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK" gene 822720..824063 /gene="rarA" /locus_tag="b0892" /gene_synonym="ECK0883" /gene_synonym="JW0875" /gene_synonym="mgsA" /gene_synonym="ycaJ" /db_xref="EcoGene:EG12690" CDS 822720..824063 /gene="rarA" /locus_tag="b0892" /gene_synonym="ECK0883" /gene_synonym="JW0875" /gene_synonym="mgsA" /gene_synonym="ycaJ" /function="putative enzyme; Not classified" /note="putative polynucleotide enzyme" /codon_start=1 /transl_table=11 /product="recombination intermediate processing DNA-dependent ATPase" /protein_id="AAC73978.1" /db_xref="GI:1787119" /db_xref="ASAP:ABE-0003034" /db_xref="UniProtKB/Swiss-Prot:P0AAZ4" /db_xref="EcoGene:EG12690" /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA HDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR" gene 824154..825446 /gene="serS" /locus_tag="b0893" /gene_synonym="ECK0884" /gene_synonym="JW0876" /db_xref="EcoGene:EG10947" CDS 824154..825446 /gene="serS" /locus_tag="b0893" /gene_synonym="ECK0884" /gene_synonym="JW0876" /EC_number="6.1.1.11" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="serine tRNA synthetase; also charges selenocystein tRNA with serine; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase" /protein_id="AAC73979.1" /db_xref="GI:1787120" /db_xref="ASAP:ABE-0003038" /db_xref="UniProtKB/Swiss-Prot:P0A8L1" /db_xref="EcoGene:EG10947" /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG" gene 825685..828129 /gene="dmsA" /locus_tag="b0894" /gene_synonym="ECK0885" /gene_synonym="JW5118" /db_xref="EcoGene:EG10232" CDS 825685..828129 /gene="dmsA" /locus_tag="b0894" /gene_synonym="ECK0885" /gene_synonym="JW5118" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit A; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit A" /protein_id="AAC73980.2" /db_xref="GI:87081797" /db_xref="ASAP:ABE-0003044" /db_xref="UniProtKB/Swiss-Prot:P18775" /db_xref="EcoGene:EG10232" /translation="MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAH AVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVR ACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGN ESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYG GWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTD TGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKN GHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHA NGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTD AIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEL IVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTI YEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDP QGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGF ESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGIHNGD KVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDKGGCINVLTTQRPSPL AKGNPSHTNLVQVEKV" gene 828140..828757 /gene="dmsB" /locus_tag="b0895" /gene_synonym="ECK0886" /gene_synonym="JW0878" /db_xref="EcoGene:EG10233" CDS 828140..828757 /gene="dmsB" /locus_tag="b0895" /gene_synonym="ECK0886" /gene_synonym="JW0878" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit B; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit B" /protein_id="AAC73981.1" /db_xref="GI:1787122" /db_xref="ASAP:ABE-0003046" /db_xref="UniProtKB/Swiss-Prot:P18776" /db_xref="EcoGene:EG10233" /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV" gene 828759..829622 /gene="dmsC" /locus_tag="b0896" /gene_synonym="ECK0887" /gene_synonym="JW0879" /db_xref="EcoGene:EG10234" CDS 828759..829622 /gene="dmsC" /locus_tag="b0896" /gene_synonym="ECK0887" /gene_synonym="JW0879" /EC_number="1.8.99.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="anaerobic dimethyl sulfoxide reductase subunit C; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, anaerobic, subunit C" /protein_id="AAC73982.1" /db_xref="GI:1787123" /db_xref="ASAP:ABE-0003048" /db_xref="UniProtKB/Swiss-Prot:P18777" /db_xref="EcoGene:EG10234" /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG LHMTVGMAVAS" gene complement(829657..830283) /gene="ycaC" /locus_tag="b0897" /gene_synonym="ECK0888" /gene_synonym="JW0880" /db_xref="EcoGene:EG11241" CDS complement(829657..830283) /gene="ycaC" /locus_tag="b0897" /gene_synonym="ECK0888" /gene_synonym="JW0880" /experiment="N-terminus verified by Edman degradation: PMID 9782055" /note="GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="putative isochorismatase family hydrolase" /protein_id="AAC73983.1" /db_xref="GI:1787124" /db_xref="ASAP:ABE-0003050" /db_xref="UniProtKB/Swiss-Prot:P21367" /db_xref="EcoGene:EG11241" /translation="MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALG DLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKA TGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGA QLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK" gene 830597..831745 /gene="ycaD" /locus_tag="b0898" /gene_synonym="ECK0889" /gene_synonym="JW0881" /db_xref="EcoGene:EG11242" CDS 830597..831745 /gene="ycaD" /locus_tag="b0898" /gene_synonym="ECK0889" /gene_synonym="JW0881" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS transporter, inner membrane protein" /protein_id="AAC73984.1" /db_xref="GI:1787126" /db_xref="ASAP:ABE-0003056" /db_xref="UniProtKB/Swiss-Prot:P21503" /db_xref="EcoGene:EG11242" /translation="MSTYTQPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVG VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVI LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV" gene 831955..833385 /gene="ycaM" /locus_tag="b0899" /gene_synonym="ECK0890" /gene_synonym="JW5119" /db_xref="EcoGene:EG13697" CDS 831955..833385 /gene="ycaM" /locus_tag="b0899" /gene_synonym="ECK0890" /gene_synonym="JW5119" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73985.2" /db_xref="GI:87081798" /db_xref="ASAP:ABE-0003058" /db_xref="UniProtKB/Swiss-Prot:P75835" /db_xref="EcoGene:EG13697" /translation="MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSW VFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLA QKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVA GIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGA EKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQY YAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSIDAPLKVLLGDADSKYIPASLCR TNASGTPVNGYFLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAF IAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFACLTGIFPKMEAFTAEWTFQLA LNVATPFVLVGLGLIFPLLARKANSK" gene complement(833386..834294) /gene="ycaN" /locus_tag="b0900" /gene_synonym="ECK0891" /gene_synonym="JW0883" /db_xref="EcoGene:EG13698" CDS complement(833386..834294) /gene="ycaN" /locus_tag="b0900" /gene_synonym="ECK0891" /gene_synonym="JW0883" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC73986.1" /db_xref="GI:1787128" /db_xref="ASAP:ABE-0003060" /db_xref="UniProtKB/Swiss-Prot:P75836" /db_xref="EcoGene:EG13698" /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARV AARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIG PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQY MSCGLRAFLDYVKTGQICQSQRHRPQ" gene 834394..834984 /gene="ycaK" /locus_tag="b0901" /gene_synonym="ECK0892" /gene_synonym="JW0884" /db_xref="EcoGene:EG12702" CDS 834394..834984 /gene="ycaK" /locus_tag="b0901" /gene_synonym="ECK0892" /gene_synonym="JW0884" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative NAD(P)H-dependent oxidoreductase" /protein_id="AAC73987.1" /db_xref="GI:1787129" /db_xref="ASAP:ABE-0003065" /db_xref="UniProtKB/Swiss-Prot:P43340" /db_xref="EcoGene:EG12702" /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL" gene complement(835066..835806) /gene="pflA" /locus_tag="b0902" /gene_synonym="act" /gene_synonym="ECK0893" /gene_synonym="JW0885" /db_xref="EcoGene:EG10028" CDS complement(835066..835806) /gene="pflA" /locus_tag="b0902" /gene_synonym="act" /gene_synonym="ECK0893" /gene_synonym="JW0885" /EC_number="1.97.1.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase" /protein_id="AAC73988.1" /db_xref="GI:1787130" /db_xref="ASAP:ABE-0003068" /db_xref="UniProtKB/Swiss-Prot:P0A9N4" /db_xref="EcoGene:EG10028" /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK LDGVKPPKKETMERVKGILEQYGHKVMF" gene complement(835998..838280) /gene="pflB" /locus_tag="b0903" /gene_synonym="ECK0894" /gene_synonym="JW0886" /gene_synonym="pfl" /db_xref="EcoGene:EG10701" CDS complement(835998..838280) /gene="pflB" /locus_tag="b0903" /gene_synonym="ECK0894" /gene_synonym="JW0886" /gene_synonym="pfl" /EC_number="2.3.1.54" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="formate acetyltransferase 1; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1" /protein_id="AAC73989.1" /db_xref="GI:1787131" /db_xref="ASAP:ABE-0003071" /db_xref="UniProtKB/Swiss-Prot:P09373" /db_xref="EcoGene:EG10701" /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG VDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF NSLTKEQQQDVITRTFTQSM" gene complement(838335..839192) /gene="focA" /locus_tag="b0904" /gene_synonym="ECK0895" /gene_synonym="JW0887" /gene_synonym="ycaE" /db_xref="EcoGene:EG11258" CDS complement(838335..839192) /gene="focA" /locus_tag="b0904" /gene_synonym="ECK0895" /gene_synonym="JW0887" /gene_synonym="ycaE" /function="putative transport; Degradation of small molecules: Carbon compounds" /note="probable formate transporter (formate channel 1); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="formate channel" /protein_id="AAC73990.1" /db_xref="GI:1787132" /db_xref="ASAP:ABE-0003073" /db_xref="UniProtKB/Swiss-Prot:P0AC23" /db_xref="EcoGene:EG11258" /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV IYLRENDHH" gene complement(839598..841358) /gene="ycaO" /locus_tag="b0905" /gene_synonym="ECK0896" /gene_synonym="JW0888" /db_xref="EcoGene:EG13699" CDS complement(839598..841358) /gene="ycaO" /locus_tag="b0905" /gene_synonym="ECK0896" /gene_synonym="JW0888" /codon_start=1 /transl_table=11 /product="ribosomal protein S12 methylthiotransferase accessory factor" /protein_id="AAC73991.2" /db_xref="GI:87081799" /db_xref="ASAP:ABE-0003081" /db_xref="UniProtKB/Swiss-Prot:P75838" /db_xref="EcoGene:EG13699" /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH QSLLKAYEKLQRAKAAFWAK" gene 841488..842180 /gene="ycaP" /locus_tag="b0906" /gene_synonym="ECK0897" /gene_synonym="JW0889" /db_xref="EcoGene:EG13700" CDS 841488..842180 /gene="ycaP" /locus_tag="b0906" /gene_synonym="ECK0897" /gene_synonym="JW0889" /codon_start=1 /transl_table=11 /product="UPF0702 family putative inner membrane protein" /protein_id="AAC73992.1" /db_xref="GI:1787135" /db_xref="ASAP:ABE-0003089" /db_xref="UniProtKB/Swiss-Prot:P75839" /db_xref="EcoGene:EG13700" /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP EWTKASRAKRVT" gene 842379..843467 /gene="serC" /locus_tag="b0907" /gene_synonym="ECK0898" /gene_synonym="JW0890" /gene_synonym="pdxC" /gene_synonym="pdxF" /db_xref="EcoGene:EG10946" CDS 842379..843467 /gene="serC" /locus_tag="b0907" /gene_synonym="ECK0898" /gene_synonym="JW0890" /gene_synonym="pdxC" /gene_synonym="pdxF" /EC_number="2.6.1.52" /function="enzyme; Amino acid biosynthesis: Serine" /note="3-phosphoserine aminotransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006564 - L-serine biosynthetic process" /codon_start=1 /transl_table=11 /product="3-phosphoserine/phosphohydroxythreonine aminotransferase" /protein_id="AAC73993.1" /db_xref="GI:1787136" /db_xref="ASAP:ABE-0003093" /db_xref="UniProtKB/Swiss-Prot:P23721" /db_xref="EcoGene:EG10946" /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID ETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA NIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM RASIYNAMPLEGVKALTDFMVEFERRHG" gene 843538..844821 /gene="aroA" /locus_tag="b0908" /gene_synonym="ECK0899" /gene_synonym="JW0891" /db_xref="EcoGene:EG10073" CDS 843538..844821 /gene="aroA" /locus_tag="b0908" /gene_synonym="ECK0899" /gene_synonym="JW0891" /EC_number="2.5.1.19" /function="enzyme; Amino acid biosynthesis: Chorismate" /experiment="N-terminus verified by Edman degradation: PMID 3518706" /note="GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="5-enolpyruvylshikimate-3-phosphate synthetase" /protein_id="AAC73994.1" /db_xref="GI:1787137" /db_xref="ASAP:ABE-0003095" /db_xref="UniProtKB/Swiss-Prot:P0A6D3" /db_xref="EcoGene:EG10073" /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA" gene 844990..845754 /gene="ycaL" /locus_tag="b0909" /gene_synonym="ECK0900" /gene_synonym="JW0892" /db_xref="EcoGene:EG13133" CDS 844990..845754 /gene="ycaL" /locus_tag="b0909" /gene_synonym="ECK0900" /gene_synonym="JW0892" /function="putative factor; Not classified" /note="putative heat shock protein; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="putative peptidase-related chaperone" /protein_id="AAC73995.2" /db_xref="GI:87081800" /db_xref="ASAP:ABE-0003098" /db_xref="UniProtKB/Swiss-Prot:P43674" /db_xref="EcoGene:EG13133" /translation="MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATL SDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSD VNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDA ISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSF ETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK" gene 845927..846610 /gene="cmk" /locus_tag="b0910" /gene_synonym="ECK0901" /gene_synonym="JW0893" /gene_synonym="mssA" /gene_synonym="ycaF" /gene_synonym="ycaG" /db_xref="EcoGene:EG11265" CDS 845927..846610 /gene="cmk" /locus_tag="b0910" /gene_synonym="ECK0901" /gene_synonym="JW0893" /gene_synonym="mssA" /gene_synonym="ycaF" /gene_synonym="ycaG" /EC_number="2.7.4.14" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /protein_id="AAC73996.1" /db_xref="GI:1787139" /db_xref="ASAP:ABE-0003101" /db_xref="UniProtKB/Swiss-Prot:P0A6I0" /db_xref="EcoGene:EG11265" /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ YARQKLALA" gene 846721..848394 /gene="rpsA" /locus_tag="b0911" /gene_synonym="ECK0902" /gene_synonym="JW0894" /gene_synonym="ssyF" /db_xref="EcoGene:EG10900" CDS 846721..848394 /gene="rpsA" /locus_tag="b0911" /gene_synonym="ECK0902" /gene_synonym="JW0894" /gene_synonym="ssyF" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 7041110,7783627,9298646,9600841,11248028" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S1" /protein_id="AAC73997.1" /db_xref="GI:1787140" /db_xref="ASAP:ABE-0003104" /db_xref="UniProtKB/Swiss-Prot:P0AG67" /db_xref="EcoGene:EG10900" /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE" gene 848554..848838 /gene="ihfB" /locus_tag="b0912" /gene_synonym="ECK0903" /gene_synonym="himD" /gene_synonym="hip" /gene_synonym="JW0895" /db_xref="EcoGene:EG10441" CDS 848554..848838 /gene="ihfB" /locus_tag="b0912" /gene_synonym="ECK0903" /gene_synonym="himD" /gene_synonym="hip" /gene_synonym="JW0895" /function="factor; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /note="integration host factor (IHF), beta subunit; site-specific recombination; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="integration host factor (IHF), DNA-binding protein, beta subunit" /protein_id="AAC73998.1" /db_xref="GI:1787141" /db_xref="ASAP:ABE-0003107" /db_xref="UniProtKB/Swiss-Prot:P0A6Y1" /db_xref="EcoGene:EG10441" /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG" gene 849046..851310 /gene="ycaI" /locus_tag="b0913" /gene_synonym="ECK0904" /gene_synonym="JW5120" /db_xref="EcoGene:EG12375" CDS 849046..851310 /gene="ycaI" /locus_tag="b0913" /gene_synonym="ECK0904" /gene_synonym="JW5120" /codon_start=1 /transl_table=11 /product="ComEC family inner membrane protein" /protein_id="AAC73999.2" /db_xref="GI:87081801" /db_xref="ASAP:ABE-0003111" /db_xref="UniProtKB/Swiss-Prot:P37443" /db_xref="EcoGene:EG12375" /translation="MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ GRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRD TGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTG MQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIA ECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQ GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL DSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVK VDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKV ALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILP RWYHQWFGVPVDNG" gene 851347..853095 /gene="msbA" /locus_tag="b0914" /gene_synonym="ECK0905" /gene_synonym="JW0897" /db_xref="EcoGene:EG10613" CDS 851347..853095 /gene="msbA" /locus_tag="b0914" /gene_synonym="ECK0905" /gene_synonym="JW0897" /function="transport; Transport of small molecules: Other" /note="ATP-binding transport protein; multicopy suppressor of htrB; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="lipid ABC transporter permease/ATPase" /protein_id="AAC74000.1" /db_xref="GI:1787143" /db_xref="ASAP:ABE-0003113" /db_xref="UniProtKB/Swiss-Prot:P60752" /db_xref="EcoGene:EG10613" /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL EHRGVYAQLHKMQFGQ" gene 853092..854078 /gene="lpxK" /locus_tag="b0915" /gene_synonym="ECK0906" /gene_synonym="JW0898" /gene_synonym="ycaH" /db_xref="EcoGene:EG11409" CDS 853092..854078 /gene="lpxK" /locus_tag="b0915" /gene_synonym="ECK0906" /gene_synonym="JW0898" /gene_synonym="ycaH" /EC_number="2.7.1.130" /function="putative enzyme; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process; GO_process: GO:0009245 - lipid A biosynthetic process; GO_process: GO:0009248 - K antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="lipid A 4'kinase" /protein_id="AAC74001.1" /db_xref="GI:1787144" /db_xref="ASAP:ABE-0003115" /db_xref="UniProtKB/Swiss-Prot:P27300" /db_xref="EcoGene:EG11409" /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTT TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN" gene 854115..855347 /gene="ycaQ" /locus_tag="b0916" /gene_synonym="ECK0907" /gene_synonym="JW0899" /db_xref="EcoGene:EG13701" CDS 854115..855347 /gene="ycaQ" /locus_tag="b0916" /gene_synonym="ECK0907" /gene_synonym="JW0899" /codon_start=1 /transl_table=11 /product="DUF1006 family protein with C-terminal wHTH domain" /protein_id="AAC74002.1" /db_xref="GI:1787145" /db_xref="ASAP:ABE-0003117" /db_xref="UniProtKB/Swiss-Prot:P75843" /db_xref="EcoGene:EG13701" /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHDDLLPLLERAL AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ LVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGCC PQGLFTDCRTGWEIDPVA" gene 855399..855581 /gene="ycaR" /locus_tag="b0917" /gene_synonym="ECK0908" /gene_synonym="JW0900" /db_xref="EcoGene:EG14287" CDS 855399..855581 /gene="ycaR" /locus_tag="b0917" /gene_synonym="ECK0908" /gene_synonym="JW0900" /codon_start=1 /transl_table=11 /product="peroxide and acid resistance protein, UPF0434 family" /protein_id="AAC74003.1" /db_xref="GI:1787146" /db_xref="ASAP:ABE-0003120" /db_xref="UniProtKB/Swiss-Prot:P0AAZ7" /db_xref="EcoGene:EG14287" /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV LLETEARVLTADESKS" gene 855578..856324 /gene="kdsB" /locus_tag="b0918" /gene_synonym="ECK0909" /gene_synonym="JW0901" /db_xref="EcoGene:EG10519" CDS 855578..856324 /gene="kdsB" /locus_tag="b0918" /gene_synonym="ECK0909" /gene_synonym="JW0901" /EC_number="2.7.7.38" /function="enzyme; Surface polysaccharides & antigens" /note="CTP:CMP-3-deoxy-D-manno-octulosonate transferase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process; GO_process: GO:0009245 - lipid A biosynthetic process; GO_process: GO:0009248 - K antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /protein_id="AAC74004.1" /db_xref="GI:1787147" /db_xref="ASAP:ABE-0003122" /db_xref="UniProtKB/Swiss-Prot:P04951" /db_xref="EcoGene:EG10519" /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYG EKIHVAVAQEVPGTGVDTPEDLERVRAEMR" gene 856478..857371 /gene="ycbJ" /locus_tag="b0919" /gene_synonym="ECK0910" /gene_synonym="JW0902" /db_xref="EcoGene:EG13702" CDS 856478..857371 /gene="ycbJ" /locus_tag="b0919" /gene_synonym="ECK0910" /gene_synonym="JW0902" /codon_start=1 /transl_table=11 /product="protein kinase-like domain protein" /protein_id="AAC74005.1" /db_xref="GI:1787149" /db_xref="ASAP:ABE-0003125" /db_xref="UniProtKB/Swiss-Prot:P0AB03" /db_xref="EcoGene:EG13702" /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN TGRFSRRNFDLASKSLLPWLA" gene complement(857348..858127) /gene="elyC" /locus_tag="b0920" /gene_synonym="ECK0911" /gene_synonym="JW0903" /gene_synonym="ycbC" /db_xref="EcoGene:EG12166" CDS complement(857348..858127) /gene="elyC" /locus_tag="b0920" /gene_synonym="ECK0911" /gene_synonym="JW0903" /gene_synonym="ycbC" /function="factor; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="envelope biogenesis factor; DUF218 superfamily protein" /protein_id="AAC74006.1" /db_xref="GI:1787150" /db_xref="ASAP:ABE-0003127" /db_xref="UniProtKB/Swiss-Prot:P0AB01" /db_xref="EcoGene:EG12166" /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFIS IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGSSGEPRQE" gene 858263..859048 /gene="smtA" /locus_tag="b0921" /gene_synonym="ECK0912" /gene_synonym="JW0904" /gene_synonym="ycbD" /db_xref="EcoGene:EG12167" CDS 858263..859048 /gene="smtA" /locus_tag="b0921" /gene_synonym="ECK0912" /gene_synonym="JW0904" /gene_synonym="ycbD" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="S-adenosylmethionine-dependent methyltransferase; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="putative S-adenosyl-L-methionine-dependent methyltransferase" /protein_id="AAC74007.1" /db_xref="GI:1787151" /db_xref="ASAP:ABE-0003131" /db_xref="UniProtKB/Swiss-Prot:P36566" /db_xref="EcoGene:EG12167" /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV" gene 859045..860367 /gene="mukF" /locus_tag="b0922" /gene_synonym="ECK0913" /gene_synonym="JW0905" /gene_synonym="kicB" /db_xref="EcoGene:EG12165" CDS 859045..860367 /gene="mukF" /locus_tag="b0922" /gene_synonym="ECK0913" /gene_synonym="JW0905" /gene_synonym="kicB" /function="factor; Cell killing" /note="mukF protein (killing factor KICB)" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, kleisin-like subunit, binds calcium" /protein_id="AAC74008.1" /db_xref="GI:1787152" /db_xref="ASAP:ABE-0003134" /db_xref="UniProtKB/Swiss-Prot:P60293" /db_xref="EcoGene:EG12165" /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY" gene 860348..861052 /gene="mukE" /locus_tag="b0923" /gene_synonym="ECK0914" /gene_synonym="JW0906" /gene_synonym="kicA" /gene_synonym="ycbA" /db_xref="EcoGene:EG11252" CDS 860348..861052 /gene="mukE" /locus_tag="b0923" /gene_synonym="ECK0914" /gene_synonym="JW0906" /gene_synonym="kicA" /gene_synonym="ycbA" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, MukE localization factor" /protein_id="AAC74009.2" /db_xref="GI:226510932" /db_xref="ASAP:ABE-0003136" /db_xref="UniProtKB/Swiss-Prot:P22524" /db_xref="EcoGene:EG11252" /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ LNDETEENQPDSGEEE" gene 861052..865512 /gene="mukB" /locus_tag="b0924" /gene_synonym="ECK0915" /gene_synonym="JW0907" /db_xref="EcoGene:EG10618" CDS 861052..865512 /gene="mukB" /locus_tag="b0924" /gene_synonym="ECK0915" /gene_synonym="JW0907" /function="structural component; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 1464330" /note="kinesin-like cell division protein involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="chromosome condensin MukBEF, ATPase and DNA-binding subunit" /protein_id="AAC74010.1" /db_xref="GI:1787154" /db_xref="ASAP:ABE-0003138" /db_xref="UniProtKB/Swiss-Prot:P22523" /db_xref="EcoGene:EG10618" /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEV DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAK ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGD PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS ERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHE NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT KKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIR TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGL QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS" gene 865773..867620 /gene="ldtD" /locus_tag="b0925" /gene_synonym="ECK0916" /gene_synonym="JW0908" /gene_synonym="ycbB" /db_xref="EcoGene:EG11253" CDS 865773..867620 /gene="ldtD" /locus_tag="b0925" /gene_synonym="ECK0916" /gene_synonym="JW0908" /gene_synonym="ycbB" /function="enzyme; Murein sacculus, peptidoglycan" /note="putative amidase" /codon_start=1 /transl_table=11 /product="murein L,D-transpeptidase" /protein_id="AAC74011.1" /db_xref="GI:1787155" /db_xref="ASAP:ABE-0003142" /db_xref="UniProtKB/Swiss-Prot:P22525" /db_xref="EcoGene:EG11253" /translation="MLLNMMCGRQLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA AMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR" gene 867801..868349 /gene="ycbK" /locus_tag="b0926" /gene_synonym="ECK0917" /gene_synonym="JW0909" /db_xref="EcoGene:EG13703" CDS 867801..868349 /gene="ycbK" /locus_tag="b0926" /gene_synonym="ECK0917" /gene_synonym="JW0909" /codon_start=1 /transl_table=11 /product="M15A protease-related family periplasmic protein" /protein_id="AAC74012.1" /db_xref="GI:1787157" /db_xref="ASAP:ABE-0003145" /db_xref="UniProtKB/Swiss-Prot:P0AB06" /db_xref="EcoGene:EG13703" /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA GGVGYYPRSNFVHIDTGPARHW" gene 868376..869023 /gene="ycbL" /locus_tag="b0927" /gene_synonym="ECK0918" /gene_synonym="JW0910" /db_xref="EcoGene:EG13704" CDS 868376..869023 /gene="ycbL" /locus_tag="b0927" /gene_synonym="ECK0918" /gene_synonym="JW0910" /codon_start=1 /transl_table=11 /product="putative metal-binding enzyme" /protein_id="AAC74013.1" /db_xref="GI:1787158" /db_xref="ASAP:ABE-0003147" /db_xref="UniProtKB/Swiss-Prot:P75849" /db_xref="EcoGene:EG13704" /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR SDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEMPVW" repeat_region 869087..869184 /note="RIP86 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(869245..870435) /gene="aspC" /locus_tag="b0928" /gene_synonym="ECK0919" /gene_synonym="JW0911" /db_xref="EcoGene:EG10096" CDS complement(869245..870435) /gene="aspC" /locus_tag="b0928" /gene_synonym="ECK0919" /gene_synonym="JW0911" /EC_number="2.6.1.1" /function="enzyme; Amino acid biosynthesis: Aspartate" /experiment="N-terminus verified by Edman degradation: PMID 387032,3298240,6378205,9298646,11736651" /note="aspartate aminotransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006532 - aspartate biosynthetic process" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase, PLP-dependent" /protein_id="AAC74014.1" /db_xref="GI:1787159" /db_xref="ASAP:ABE-0003150" /db_xref="UniProtKB/Swiss-Prot:P00509" /db_xref="EcoGene:EG10096" /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI VAVL" gene complement(870620..871708) /gene="ompF" /locus_tag="b0929" /gene_synonym="cmlB" /gene_synonym="coa" /gene_synonym="cry" /gene_synonym="ECK0920" /gene_synonym="JW0912" /gene_synonym="nfxB?" /gene_synonym="tolF" /db_xref="EcoGene:EG10671" CDS complement(870620..871708) /gene="ompF" /locus_tag="b0929" /gene_synonym="cmlB" /gene_synonym="coa" /gene_synonym="cry" /gene_synonym="ECK0920" /gene_synonym="JW0912" /gene_synonym="nfxB?" /gene_synonym="tolF" /function="membrane; Outer membrane constituents" /note="outer membrane protein 1a (Ia;b;F); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane porin 1a (Ia;b;F)" /protein_id="AAC74015.1" /db_xref="GI:1787160" /db_xref="ASAP:ABE-0003153" /db_xref="UniProtKB/Swiss-Prot:P02931" /db_xref="EcoGene:EG10671" /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD YIINQIDSDNKLGVGSDDTVAVGIVYQF" gene complement(872311..873711) /gene="asnS" /locus_tag="b0930" /gene_synonym="ECK0921" /gene_synonym="JW0913" /gene_synonym="lcs" /gene_synonym="tss" /db_xref="EcoGene:EG10094" CDS complement(872311..873711) /gene="asnS" /locus_tag="b0930" /gene_synonym="ECK0921" /gene_synonym="JW0913" /gene_synonym="lcs" /gene_synonym="tss" /EC_number="6.1.1.22" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="asparagine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="asparaginyl tRNA synthetase" /protein_id="AAC74016.1" /db_xref="GI:1787161" /db_xref="ASAP:ABE-0003162" /db_xref="UniProtKB/Swiss-Prot:P0A8M0" /db_xref="EcoGene:EG10094" /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN VRDVIPFPRTPRNASF" gene complement(873880..875082) /gene="pncB" /locus_tag="b0931" /gene_synonym="ECK0922" /gene_synonym="JW0914" /db_xref="EcoGene:EG10742" CDS complement(873880..875082) /gene="pncB" /locus_tag="b0931" /gene_synonym="ECK0922" /gene_synonym="JW0914" /EC_number="6.3.4.21" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="AAC74017.1" /db_xref="GI:1787162" /db_xref="ASAP:ABE-0003167" /db_xref="UniProtKB/Swiss-Prot:P18133" /db_xref="EcoGene:EG10742" /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD DLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR YQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD LPHIKKAS" gene 875348..877960 /gene="pepN" /locus_tag="b0932" /gene_synonym="ECK0923" /gene_synonym="JW0915" /db_xref="EcoGene:EG10696" CDS 875348..877960 /gene="pepN" /locus_tag="b0932" /gene_synonym="ECK0923" /gene_synonym="JW0915" /EC_number="3.4.11.2" /function="enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 2869947" /codon_start=1 /transl_table=11 /product="aminopeptidase N" /protein_id="AAC74018.1" /db_xref="GI:1787163" /db_xref="ASAP:ABE-0003171" /db_xref="UniProtKB/Swiss-Prot:P04825" /db_xref="EcoGene:EG10696" /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAA NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGN RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNS VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH QNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH AEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN LSGDLYEKITKALA" gene complement(878003..878770) /gene="ssuB" /locus_tag="b0933" /gene_synonym="ECK0924" /gene_synonym="JW0916" /gene_synonym="ycbE" /db_xref="EcoGene:EG12358" CDS complement(878003..878770) /gene="ssuB" /locus_tag="b0933" /gene_synonym="ECK0924" /gene_synonym="JW0916" /gene_synonym="ycbE" /function="transport; Not classified" /note="ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="aliphatic sulfonate ABC transporter ATPase" /protein_id="AAC74019.1" /db_xref="GI:1787164" /db_xref="ASAP:ABE-0003173" /db_xref="UniProtKB/Swiss-Prot:P0AAI1" /db_xref="EcoGene:EG12358" /translation="MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVG RSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVG LGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL GALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD IPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQG" gene complement(878767..879558) /gene="ssuC" /locus_tag="b0934" /gene_synonym="ECK0925" /gene_synonym="JW5121" /gene_synonym="ycbM" /db_xref="EcoGene:EG13705" CDS complement(878767..879558) /gene="ssuC" /locus_tag="b0934" /gene_synonym="ECK0925" /gene_synonym="JW5121" /gene_synonym="ycbM" /function="putative transport; Not classified" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="aliphatic sulfonate ABC transporter permease" /protein_id="AAC74020.2" /db_xref="GI:87081802" /db_xref="ASAP:ABE-0003175" /db_xref="UniProtKB/Swiss-Prot:P75851" /db_xref="EcoGene:EG13705" /translation="MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEG VVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQ MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARS YGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREF LQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV" gene complement(879569..880714) /gene="ssuD" /locus_tag="b0935" /gene_synonym="ECK0926" /gene_synonym="JW0918" /gene_synonym="ssi6" /gene_synonym="ycbN" /db_xref="EcoGene:EG13706" CDS complement(879569..880714) /gene="ssuD" /locus_tag="b0935" /gene_synonym="ECK0926" /gene_synonym="JW0918" /gene_synonym="ssi6" /gene_synonym="ycbN" /EC_number="1.14.14.5" /note="GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="alkanesulfonate monooxygenase, FMNH(2)-dependent" /protein_id="AAC74021.1" /db_xref="GI:1787166" /db_xref="ASAP:ABE-0003178" /db_xref="UniProtKB/Swiss-Prot:P80645" /db_xref="EcoGene:EG13706" /translation="MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGY TGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGR ALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAH GRKIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFARTDSVGQQRMAAL HNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPH LEEAYRVGELLFPLLDVAIPEIPQPQPLNPQGEAVANDFIPRKVAQS" gene complement(880711..881670) /gene="ssuA" /locus_tag="b0936" /gene_synonym="ECK0927" /gene_synonym="JW0919" /gene_synonym="ycbO" /db_xref="EcoGene:EG13707" CDS complement(880711..881670) /gene="ssuA" /locus_tag="b0936" /gene_synonym="ECK0927" /gene_synonym="JW0919" /gene_synonym="ycbO" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="aliphatic sulfonate ABC transporter periplasmic binding protein" /protein_id="AAC74022.2" /db_xref="GI:87081803" /db_xref="ASAP:ABE-0003180" /db_xref="UniProtKB/Swiss-Prot:P75853" /db_xref="EcoGene:EG13707" /translation="MRNIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAK SHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL" gene complement(881663..882238) /gene="ssuE" /locus_tag="b0937" /gene_synonym="ECK0928" /gene_synonym="JW0920" /gene_synonym="ssi4" /gene_synonym="ycbP" /db_xref="EcoGene:EG13708" CDS complement(881663..882238) /gene="ssuE" /locus_tag="b0937" /gene_synonym="ECK0928" /gene_synonym="JW0920" /gene_synonym="ssi4" /gene_synonym="ycbP" /EC_number="1.5.1.38" /experiment="N-terminus verified by Edman degradation: PMID 8774726" /note="GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="NAD(P)H-dependent FMN reductase" /protein_id="AAC74023.1" /db_xref="GI:1787168" /db_xref="ASAP:ABE-0003182" /db_xref="UniProtKB/Swiss-Prot:P80644" /db_xref="EcoGene:EG13708" /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR LDTALETFWQALHRRDVQVPDLLSLRGNAHA" gene 882594..883133 /gene="elfA" /locus_tag="b0938" /gene_synonym="ECK0929" /gene_synonym="JW5122" /gene_synonym="ycbQ" /db_xref="EcoGene:EG13709" CDS 882594..883133 /gene="elfA" /locus_tag="b0938" /gene_synonym="ECK0929" /gene_synonym="JW5122" /gene_synonym="ycbQ" /function="structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="laminin-binding fimbrin subunit" /protein_id="AAC74024.2" /db_xref="GI:87081804" /db_xref="ASAP:ABE-0003185" /db_xref="UniProtKB/Swiss-Prot:P75855" /db_xref="EcoGene:EG13709" /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACT LVAATKDSVVTLPDVSATKLQTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTADT TQITAFANQASSDAATNVALQMYMNDGTTAITPDTETGNILLQDGDQTLTFKVDYIAT GKATSGNVNAVTNFHINYY" gene 883216..883917 /gene="elfD" /locus_tag="b0939" /gene_synonym="ECK0930" /gene_synonym="JW0922" /gene_synonym="ycbR" /db_xref="EcoGene:EG13710" CDS 883216..883917 /gene="elfD" /locus_tag="b0939" /gene_synonym="ECK0930" /gene_synonym="JW0922" /gene_synonym="ycbR" /function="putative factor; Surface structures" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC74025.1" /db_xref="GI:1787171" /db_xref="ASAP:ABE-0003187" /db_xref="UniProtKB/Swiss-Prot:P75856" /db_xref="EcoGene:EG13710" /translation="MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEG EEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGA PLAKDRETLFFTSVRAVPSTTKRKEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRT INDYGAETPQLNCKS" gene 883942..886542 /gene="elfC" /locus_tag="b0940" /gene_synonym="ECK0931" /gene_synonym="JW0923" /gene_synonym="ycbS" /db_xref="EcoGene:EG13711" CDS 883942..886542 /gene="elfC" /locus_tag="b0940" /gene_synonym="ECK0931" /gene_synonym="JW0923" /gene_synonym="ycbS" /function="putative membrane; Outer membrane constituents" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane fimbrial subunit export usher protein" /protein_id="AAC74026.1" /db_xref="GI:1787172" /db_xref="ASAP:ABE-0003189" /db_xref="UniProtKB/Swiss-Prot:P75857" /db_xref="EcoGene:EG13711" /translation="MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFF KDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTE SLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNS TWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNM LPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVE IKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGP WGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLY AKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNY SKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLG LTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNY ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSY RENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRF GAIATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINS AITRMDAICR" gene 886533..887603 /gene="elfG" /locus_tag="b0941" /gene_synonym="ECK0932" /gene_synonym="JW0924" /gene_synonym="ycbT" /db_xref="EcoGene:EG13712" CDS 886533..887603 /gene="elfG" /locus_tag="b0941" /gene_synonym="ECK0932" /gene_synonym="JW0924" /gene_synonym="ycbT" /function="putative structural component; Surface structures" /note="GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC74027.1" /db_xref="GI:1787173" /db_xref="ASAP:ABE-0003191" /db_xref="UniProtKB/Swiss-Prot:P75858" /db_xref="EcoGene:EG13712" /translation="MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYI GVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASG NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSL GSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSL TATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVS TTGVPPETGRFEATATVRINFD" gene 887615..888157 /gene="ycbU" /locus_tag="b0942" /gene_synonym="ECK0933" /gene_synonym="JW0925" /db_xref="EcoGene:EG13713" CDS 887615..888157 /gene="ycbU" /locus_tag="b0942" /gene_synonym="ECK0933" /gene_synonym="JW0925" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbriae protein" /protein_id="AAC74028.1" /db_xref="GI:1787174" /db_xref="ASAP:ABE-0003193" /db_xref="UniProtKB/Swiss-Prot:P75859" /db_xref="EcoGene:EG13713" /translation="MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDV ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST KAGATGGNATAVLYFDLVYQ" gene 888165..888680 /gene="ycbV" /locus_tag="b0943" /gene_synonym="ECK0934" /gene_synonym="JW5123" /db_xref="EcoGene:EG13714" CDS 888165..888680 /gene="ycbV" /locus_tag="b0943" /gene_synonym="ECK0934" /gene_synonym="JW5123" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC74029.2" /db_xref="GI:87081805" /db_xref="ASAP:ABE-0003195" /db_xref="UniProtKB/Swiss-Prot:P75860" /db_xref="EcoGene:EG13714" /translation="MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDS KQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSI ESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKV NASATFVLHYD" gene 888673..889383 /gene="ycbF" /locus_tag="b0944" /gene_synonym="ECK0935" /gene_synonym="JW5124" /db_xref="EcoGene:EG12397" CDS 888673..889383 /gene="ycbF" /locus_tag="b0944" /gene_synonym="ECK0935" /gene_synonym="JW5124" /function="putative factor; Surface structures" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC74030.2" /db_xref="GI:87081806" /db_xref="ASAP:ABE-0003197" /db_xref="UniProtKB/Swiss-Prot:P40876" /db_xref="EcoGene:EG12397" /translation="MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESI SILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRT ESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQL RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAW RAINDYGGLSAKKEQNLP" gene 889494..890504 /gene="pyrD" /locus_tag="b0945" /gene_synonym="ECK0936" /gene_synonym="JW0928" /db_xref="EcoGene:EG10807" CDS 889494..890504 /gene="pyrD" /locus_tag="b0945" /gene_synonym="ECK0936" /gene_synonym="JW0928" /EC_number="1.3.5.2" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2992959" /note="dihydro-orotate dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="dihydro-orotate oxidase, FMN-linked" /protein_id="AAC74031.1" /db_xref="GI:1787177" /db_xref="ASAP:ABE-0003201" /db_xref="UniProtKB/Swiss-Prot:P0A7E1" /db_xref="EcoGene:EG10807" /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT HI" gene 890678..891220 /gene="zapC" /locus_tag="b0946" /gene_synonym="ECK0937" /gene_synonym="JW5125" /gene_synonym="ycbW" /db_xref="EcoGene:EG13715" CDS 890678..891220 /gene="zapC" /locus_tag="b0946" /gene_synonym="ECK0937" /gene_synonym="JW5125" /gene_synonym="ycbW" /codon_start=1 /transl_table=11 /product="FtsZ stabilizer" /protein_id="AAC74032.2" /db_xref="GI:87081807" /db_xref="ASAP:ABE-0003204" /db_xref="UniProtKB/Swiss-Prot:P75862" /db_xref="EcoGene:EG13715" /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHG EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI MNDRLKPQVNVDSFSLEQAV" gene complement(891217..892326) /gene="ycbX" /locus_tag="b0947" /gene_synonym="ECK0938" /gene_synonym="JW5126" /db_xref="EcoGene:EG13716" CDS complement(891217..892326) /gene="ycbX" /locus_tag="b0947" /gene_synonym="ECK0938" /gene_synonym="JW5126" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="6-N-hydroxylaminopurine detoxification oxidoreductase" /protein_id="AAC74033.1" /db_xref="GI:1787179" /db_xref="ASAP:ABE-0003206" /db_xref="UniProtKB/Swiss-Prot:P75863" /db_xref="EcoGene:EG13716" /translation="MATLIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ LLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR" gene 892570..894678 /gene="rlmL" /locus_tag="b0948" /gene_synonym="ECK0939" /gene_synonym="JW0931" /gene_synonym="rlmK" /gene_synonym="rlmKL" /gene_synonym="ycbY" /db_xref="EcoGene:EG13717" CDS 892570..894678 /gene="rlmL" /locus_tag="b0948" /gene_synonym="ECK0939" /gene_synonym="JW0931" /gene_synonym="rlmK" /gene_synonym="rlmKL" /gene_synonym="ycbY" /function="enzyme; rRNA modification" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent" /protein_id="AAC74034.1" /db_xref="GI:1787181" /db_xref="ASAP:ABE-0003211" /db_xref="UniProtKB/Swiss-Prot:P75864" /db_xref="EcoGene:EG13717" /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT LSQDFARNRQIHNCWLITAA" gene 894690..896597 /gene="uup" /locus_tag="b0949" /gene_synonym="ECK0940" /gene_synonym="JW0932" /gene_synonym="ycbH" /gene_synonym="ycbI" /db_xref="EcoGene:EG13134" CDS 894690..896597 /gene="uup" /locus_tag="b0949" /gene_synonym="ECK0940" /gene_synonym="JW0932" /gene_synonym="ycbH" /gene_synonym="ycbI" /function="factor; DNA - replication, repair, restriction/modification" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="replication regulatory ABC-F family DNA-binding ATPase" /protein_id="AAC74035.1" /db_xref="GI:1787182" /db_xref="ASAP:ABE-0003213" /db_xref="UniProtKB/Swiss-Prot:P43672" /db_xref="EcoGene:EG13134" /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQL VKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA ELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLL LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER WEYLEALKNGG" repeat_region 896645..896673 /note="REP87 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 896727..897980 /gene="pqiA" /locus_tag="b0950" /gene_synonym="ECK0941" /gene_synonym="JW0933" /gene_synonym="pqi5" /db_xref="EcoGene:EG12965" CDS 896727..897980 /gene="pqiA" /locus_tag="b0950" /gene_synonym="ECK0941" /gene_synonym="JW0933" /gene_synonym="pqi5" /function="phenotype; Not classified" /note="paraquat-inducible protein A" /codon_start=1 /transl_table=11 /product="paraquat-inducible, SoxRS-regulated inner membrane protein" /protein_id="AAC74036.1" /db_xref="GI:1787183" /db_xref="ASAP:ABE-0003219" /db_xref="UniProtKB/Swiss-Prot:P0AFL9" /db_xref="EcoGene:EG12965" /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM TMFSAMTFDPRLSWDRQPESEHEES" gene 897985..899625 /gene="pqiB" /locus_tag="b0951" /gene_synonym="ECK0942" /gene_synonym="JW0934" /gene_synonym="pqi5" /db_xref="EcoGene:EG12966" CDS 897985..899625 /gene="pqiB" /locus_tag="b0951" /gene_synonym="ECK0942" /gene_synonym="JW0934" /gene_synonym="pqi5" /function="phenotype; Not classified" /codon_start=1 /transl_table=11 /product="paraquat-inducible, SoxRS-regulated MCE domain protein" /protein_id="AAC74037.1" /db_xref="GI:1787184" /db_xref="ASAP:ABE-0003221" /db_xref="UniProtKB/Swiss-Prot:P43671" /db_xref="EcoGene:EG12966" /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRF WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR IPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ" gene 899622..900185 /gene="pqiC" /locus_tag="b0952" /gene_synonym="ECK0943" /gene_synonym="JW5127" /gene_synonym="ymbA" /db_xref="EcoGene:EG13719" CDS 899622..900185 /gene="pqiC" /locus_tag="b0952" /gene_synonym="ECK0943" /gene_synonym="JW5127" /gene_synonym="ymbA" /codon_start=1 /transl_table=11 /product="DUF330 family putative lipoprotein" /protein_id="AAC74038.2" /db_xref="GI:145693109" /db_xref="ASAP:ABE-0003223" /db_xref="UniProtKB/Swiss-Prot:P0AB10" /db_xref="EcoGene:EG13719" /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW VVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG YDEMVKVLAGVWSQEAASIAQEIKRLP" gene 900441..900608 /gene="rmf" /locus_tag="b0953" /gene_synonym="ECK0944" /gene_synonym="JW0936" /db_xref="EcoGene:EG50004" CDS 900441..900608 /gene="rmf" /locus_tag="b0953" /gene_synonym="ECK0944" /gene_synonym="JW0936" /function="factor; Ribosomes - maturation and modification" /experiment="N-terminus verified by Edman degradation: PMID 2181444" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="ribosome modulation factor" /protein_id="AAC74039.1" /db_xref="GI:1787186" /db_xref="ASAP:ABE-0003227" /db_xref="UniProtKB/Swiss-Prot:P0AFW2" /db_xref="EcoGene:EG50004" /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW REAMADRVVMA" gene complement(900678..901196) /gene="fabA" /locus_tag="b0954" /gene_synonym="ECK0945" /gene_synonym="JW0937" /db_xref="EcoGene:EG10273" CDS complement(900678..901196) /gene="fabA" /locus_tag="b0954" /gene_synonym="ECK0945" /gene_synonym="JW0937" /EC_number="4.2.1.59" /EC_number="5.3.3.14" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2832401" /note="beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase" /codon_start=1 /transl_table=11 /product="beta-hydroxydecanoyl thioester dehydrase" /protein_id="AAC74040.1" /db_xref="GI:1787187" /db_xref="ASAP:ABE-0003229" /db_xref="UniProtKB/Swiss-Prot:P0A6Q3" /db_xref="EcoGene:EG10273" /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD LKVGLFQDTSAF" gene complement(901265..903025) /gene="ycbZ" /locus_tag="b0955" /gene_synonym="ECK0946" /gene_synonym="JW0938" /db_xref="EcoGene:EG13718" CDS complement(901265..903025) /gene="ycbZ" /locus_tag="b0955" /gene_synonym="ECK0946" /gene_synonym="JW0938" /function="putative enzyme; Not classified" /note="putative ATP-dependent protease; GO_process: GO:0006508 - proteolysis" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC74041.1" /db_xref="GI:1787188" /db_xref="ASAP:ABE-0003233" /db_xref="UniProtKB/Swiss-Prot:P75867" /db_xref="EcoGene:EG13718" /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF ALEQLLHTRASSSFMLAKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLR HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE MEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPILIREAA RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ QEGRHRFPWPLRWLNWFIPN" gene 903211..903663 /gene="matP" /locus_tag="b0956" /gene_synonym="ECK0947" /gene_synonym="JW0939" /gene_synonym="ycbG" /db_xref="EcoGene:EG12855" CDS 903211..903663 /gene="matP" /locus_tag="b0956" /gene_synonym="ECK0947" /gene_synonym="JW0939" /gene_synonym="ycbG" /function="factor; DNA - replication, repair, restriction/modification" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="Ter macrodomain organizer matS-binding protein" /protein_id="AAC74042.1" /db_xref="GI:1787190" /db_xref="ASAP:ABE-0003238" /db_xref="UniProtKB/Swiss-Prot:P0A8N0" /db_xref="EcoGene:EG12855" /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE" gene complement(903739..904779) /gene="ompA" /locus_tag="b0957" /gene_synonym="con" /gene_synonym="ECK0948" /gene_synonym="JW0940" /gene_synonym="tolG" /gene_synonym="tut" /db_xref="EcoGene:EG10669" CDS complement(903739..904779) /gene="ompA" /locus_tag="b0957" /gene_synonym="con" /gene_synonym="ECK0948" /gene_synonym="JW0940" /gene_synonym="tolG" /gene_synonym="tut" /function="membrane; Outer membrane constituents" /note="outer membrane protein 3a (II*;G;d); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane protein A (3a;II*;G;d)" /protein_id="AAC74043.1" /db_xref="GI:1787191" /db_xref="ASAP:ABE-0003240" /db_xref="UniProtKB/Swiss-Prot:P0A910" /db_xref="EcoGene:EG10669" /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV KGIKDVVTQPQA" gene complement(905136..905645) /gene="sulA" /locus_tag="b0958" /gene_synonym="ECK0949" /gene_synonym="JW0941" /gene_synonym="sfiA" /db_xref="EcoGene:EG10984" CDS complement(905136..905645) /gene="sulA" /locus_tag="b0958" /gene_synonym="ECK0949" /gene_synonym="JW0941" /gene_synonym="sfiA" /function="phenotype; Cell division" /note="suppressor of lon; inhibits cell division and ftsZ ring formation; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="SOS cell division inhibitor" /protein_id="AAC74044.1" /db_xref="GI:1787192" /db_xref="ASAP:ABE-0003244" /db_xref="UniProtKB/Swiss-Prot:P0AFZ5" /db_xref="EcoGene:EG10984" /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG LKIHSNLYH" gene 905864..906493 /gene="sxy" /locus_tag="b0959" /gene_synonym="ECK0950" /gene_synonym="JW0942" /gene_synonym="tfoX" /gene_synonym="yccR" /db_xref="EcoGene:EG13720" CDS 905864..906493 /gene="sxy" /locus_tag="b0959" /gene_synonym="ECK0950" /gene_synonym="JW0942" /gene_synonym="tfoX" /gene_synonym="yccR" /codon_start=1 /transl_table=11 /product="CRP-S-dependent promoter expression factor" /protein_id="AAC74045.1" /db_xref="GI:1787193" /db_xref="ASAP:ABE-0003249" /db_xref="UniProtKB/Swiss-Prot:P75869" /db_xref="EcoGene:EG13720" /translation="MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE" gene complement(906456..908609) /gene="yccS" /locus_tag="b0960" /gene_synonym="ECK0951" /gene_synonym="JW5128" /db_xref="EcoGene:EG13721" CDS complement(906456..908609) /gene="yccS" /locus_tag="b0960" /gene_synonym="ECK0951" /gene_synonym="JW5128" /codon_start=1 /transl_table=11 /product="putative transporter, FUSC superfamily inner membrane protein" /protein_id="AAC74046.2" /db_xref="GI:87081808" /db_xref="ASAP:ABE-0003251" /db_xref="UniProtKB/Swiss-Prot:P75870" /db_xref="EcoGene:EG13721" /translation="MLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPL TLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGF ILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLL FPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDQSQAPLYDLALANGLLMATLNQTK LSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQR LMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFL LNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESALFR HAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLVGIA IGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEV ALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQGRD NRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYISALG AHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRADSKE PLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA" gene complement(908628..909074) /gene="yccF" /locus_tag="b0961" /gene_synonym="ECK0952" /gene_synonym="JW0944" /db_xref="EcoGene:EG12306" CDS complement(908628..909074) /gene="yccF" /locus_tag="b0961" /gene_synonym="ECK0952" /gene_synonym="JW0944" /codon_start=1 /transl_table=11 /product="DUF307 family inner membrane protein" /protein_id="AAC74047.1" /db_xref="GI:1787195" /db_xref="ASAP:ABE-0003253" /db_xref="UniProtKB/Swiss-Prot:P0AB12" /db_xref="EcoGene:EG12306" /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE" gene 909197..911251 /gene="helD" /locus_tag="b0962" /gene_synonym="ECK0953" /gene_synonym="JW0945" /gene_synonym="srjB" /db_xref="EcoGene:EG10426" CDS 909197..911251 /gene="helD" /locus_tag="b0962" /gene_synonym="ECK0953" /gene_synonym="JW0945" /gene_synonym="srjB" /EC_number="3.6.1.-" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2542273" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA helicase IV" /protein_id="AAC74048.1" /db_xref="GI:1787196" /db_xref="ASAP:ABE-0003257" /db_xref="UniProtKB/Swiss-Prot:P15038" /db_xref="EcoGene:EG10426" /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI GEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR KP" gene complement(911283..911741) /gene="mgsA" /locus_tag="b0963" /gene_synonym="ECK0954" /gene_synonym="JW5129" /gene_synonym="mgs" /gene_synonym="yccG" /db_xref="EcoGene:EG12307" CDS complement(911283..911741) /gene="mgsA" /locus_tag="b0963" /gene_synonym="ECK0954" /gene_synonym="JW5129" /gene_synonym="mgs" /gene_synonym="yccG" /EC_number="4.2.3.3" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 9489667,9665712" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009438 - methylglyoxal metabolic process" /codon_start=1 /transl_table=11 /product="methylglyoxal synthase" /protein_id="AAC74049.2" /db_xref="GI:87081809" /db_xref="ASAP:ABE-0003259" /db_xref="UniProtKB/Swiss-Prot:P0A731" /db_xref="EcoGene:EG12307" /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK" gene complement(911837..912499) /gene="yccT" /locus_tag="b0964" /gene_synonym="ECK0955" /gene_synonym="JW0947" /db_xref="EcoGene:EG13722" CDS complement(911837..912499) /gene="yccT" /locus_tag="b0964" /gene_synonym="ECK0955" /gene_synonym="JW0947" /codon_start=1 /transl_table=11 /product="UPF0319 family protein" /protein_id="AAC74050.1" /db_xref="GI:1787198" /db_xref="ASAP:ABE-0003262" /db_xref="UniProtKB/Swiss-Prot:P0A8X4" /db_xref="EcoGene:EG13722" /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP SS" gene 912672..913085 /gene="yccU" /locus_tag="b0965" /gene_synonym="ECK0956" /gene_synonym="JW5130" /db_xref="EcoGene:EG13723" CDS 912672..913085 /gene="yccU" /locus_tag="b0965" /gene_synonym="ECK0956" /gene_synonym="JW5130" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /codon_start=1 /transl_table=11 /product="putative CoA-binding protein" /protein_id="AAC74051.2" /db_xref="GI:87081810" /db_xref="ASAP:ABE-0003267" /db_xref="UniProtKB/Swiss-Prot:P75874" /db_xref="EcoGene:EG13723" /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI PVSPKVAGKTLLGQKGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK" repeat_region 913092..913115 /note="REP88 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(913130..913447) /gene="hspQ" /locus_tag="b0966" /gene_synonym="ECK0957" /gene_synonym="JW5970" /gene_synonym="yccV" /db_xref="EcoGene:EG13724" CDS complement(913130..913447) /gene="hspQ" /locus_tag="b0966" /gene_synonym="ECK0957" /gene_synonym="JW5970" /gene_synonym="yccV" /experiment="N-terminus verified by Edman degradation: PMID 15569148" /codon_start=1 /transl_table=11 /product="heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein" /protein_id="AAC74052.2" /db_xref="GI:145693110" /db_xref="ASAP:ABE-0003269" /db_xref="UniProtKB/Swiss-Prot:P0AB20" /db_xref="EcoGene:EG13724" /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR LRN" gene complement(913505..914695) /gene="rlmI" /locus_tag="b0967" /gene_synonym="ECK0958" /gene_synonym="JW5898" /gene_synonym="yccW" /db_xref="EcoGene:EG13725" CDS complement(913505..914695) /gene="rlmI" /locus_tag="b0967" /gene_synonym="ECK0958" /gene_synonym="JW5898" /gene_synonym="yccW" /function="enzyme; rRNA modification" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="23S rRNA m(5)C1962 methyltransferase, SAM-dependent" /protein_id="AAC74053.2" /db_xref="GI:145693111" /db_xref="ASAP:ABE-0003272" /db_xref="UniProtKB/Swiss-Prot:P75876" /db_xref="EcoGene:EG13725" /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVA VRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA CRVM" gene 914790..915068 /gene="yccX" /locus_tag="b0968" /gene_synonym="ECK0959" /gene_synonym="JW5131" /db_xref="EcoGene:EG13726" CDS 914790..915068 /gene="yccX" /locus_tag="b0968" /gene_synonym="ECK0959" /gene_synonym="JW5131" /codon_start=1 /transl_table=11 /product="weak acylphosphatase" /protein_id="AAC74054.1" /db_xref="GI:1787203" /db_xref="ASAP:ABE-0003276" /db_xref="UniProtKB/Swiss-Prot:P0AB65" /db_xref="EcoGene:EG13726" /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR" gene complement(915065..915394) /gene="tusE" /locus_tag="b0969" /gene_synonym="ECK0960" /gene_synonym="JW0952" /gene_synonym="yccK" /db_xref="EcoGene:EG12876" CDS complement(915065..915394) /gene="tusE" /locus_tag="b0969" /gene_synonym="ECK0960" /gene_synonym="JW0952" /gene_synonym="yccK" /function="orf; Not classified" /note="putative sulfite reductase" /codon_start=1 /transl_table=11 /product="mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase" /protein_id="AAC74055.2" /db_xref="GI:87081811" /db_xref="ASAP:ABE-0003278" /db_xref="UniProtKB/Swiss-Prot:P0AB18" /db_xref="EcoGene:EG12876" /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL PKPVKCI" gene complement(915485..916144) /gene="yccA" /locus_tag="b0970" /gene_synonym="ECK0961" /gene_synonym="JW0953" /db_xref="EcoGene:EG11113" CDS complement(915485..916144) /gene="yccA" /locus_tag="b0970" /gene_synonym="ECK0961" /gene_synonym="JW0953" /function="putative transport; Not classified" /note="putative carrier/transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="Modulator of FtsH protease, inner membrane protein" /protein_id="AAC74056.1" /db_xref="GI:1787205" /db_xref="ASAP:ABE-0003280" /db_xref="UniProtKB/Swiss-Prot:P0AAC6" /db_xref="EcoGene:EG11113" /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL HLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR D" gene complement(916351..916438) /gene="serT" /locus_tag="b0971" /gene_synonym="divE" /gene_synonym="ECK0962" /gene_synonym="JWR0026" /db_xref="EcoGene:EG30093" tRNA complement(916351..916438) /gene="serT" /locus_tag="b0971" /gene_synonym="divE" /gene_synonym="ECK0962" /gene_synonym="JWR0026" /product="tRNA-Ser" /note="anticodon: UGA" /db_xref="ASAP:ABE-0003283" /db_xref="EcoGene:EG30093" gene 916865..917983 /gene="hyaA" /locus_tag="b0972" /gene_synonym="ECK0963" /gene_synonym="JW0954" /db_xref="EcoGene:EG10468" CDS 916865..917983 /gene="hyaA" /locus_tag="b0972" /gene_synonym="ECK0963" /gene_synonym="JW0954" /EC_number="1.12.99.6" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="hydrogenase-1 small subunit; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 1, small subunit" /protein_id="AAC74057.1" /db_xref="GI:1787206" /db_xref="ASAP:ABE-0003286" /db_xref="UniProtKB/Swiss-Prot:P69739" /db_xref="EcoGene:EG10468" /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA" gene 917980..919773 /gene="hyaB" /locus_tag="b0973" /gene_synonym="ECK0964" /gene_synonym="JW0955" /db_xref="EcoGene:EG10469" CDS 917980..919773 /gene="hyaB" /locus_tag="b0973" /gene_synonym="ECK0964" /gene_synonym="JW0955" /EC_number="1.12.99.6" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 2180913" /note="hydrogenase-1 large subunit; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 1, large subunit" /protein_id="AAC74058.1" /db_xref="GI:1787207" /db_xref="ASAP:ABE-0003288" /db_xref="UniProtKB/Swiss-Prot:P0ACD8" /db_xref="EcoGene:EG10469" /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI LRTLHSFDPCLACSTHVLGDDGSELISVQVR" gene 919792..920499 /gene="hyaC" /locus_tag="b0974" /gene_synonym="ECK0965" /gene_synonym="JW0956" /db_xref="EcoGene:EG10470" CDS 919792..920499 /gene="hyaC" /locus_tag="b0974" /gene_synonym="ECK0965" /gene_synonym="JW0956" /function="putative enzyme; Energy metabolism, carbon: Aerobic respiration" /note="probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="hydrogenase 1, b-type cytochrome subunit" /protein_id="AAC74059.1" /db_xref="GI:1787208" /db_xref="ASAP:ABE-0003290" /db_xref="UniProtKB/Swiss-Prot:P0AAM1" /db_xref="EcoGene:EG10470" /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV NGYRSHKFGKISNKERS" gene 920496..921083 /gene="hyaD" /locus_tag="b0975" /gene_synonym="ECK0966" /gene_synonym="JW0957" /db_xref="EcoGene:EG10471" CDS 920496..921083 /gene="hyaD" /locus_tag="b0975" /gene_synonym="ECK0966" /gene_synonym="JW0957" /function="factor; Energy metabolism, carbon: Aerobic respiration" /note="processing of HyaA and HyaB proteins; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="hydrogenase 1 maturation protease" /protein_id="AAC74060.1" /db_xref="GI:1787209" /db_xref="ASAP:ABE-0003292" /db_xref="UniProtKB/Swiss-Prot:P19930" /db_xref="EcoGene:EG10471" /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVP QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG" gene 921080..921478 /gene="hyaE" /locus_tag="b0976" /gene_synonym="ECK0967" /gene_synonym="JW0958" /db_xref="EcoGene:EG10472" CDS 921080..921478 /gene="hyaE" /locus_tag="b0976" /gene_synonym="ECK0967" /gene_synonym="JW0958" /function="factor; Energy metabolism, carbon: Aerobic respiration" /note="processing of HyaA and HyaB proteins; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative HyaA chaperone" /protein_id="AAC74061.1" /db_xref="GI:1787210" /db_xref="ASAP:ABE-0003294" /db_xref="UniProtKB/Swiss-Prot:P19931" /db_xref="EcoGene:EG10472" /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD PKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGN YRGVLNGIHPWAELINLMRGLVEPQQERAS" gene 921475..922332 /gene="hyaF" /locus_tag="b0977" /gene_synonym="ECK0968" /gene_synonym="JW0959" /db_xref="EcoGene:EG10473" CDS 921475..922332 /gene="hyaF" /locus_tag="b0977" /gene_synonym="ECK0968" /gene_synonym="JW0959" /function="phenotype; Energy metabolism, carbon: Aerobic respiration" /note="nickel incorporation into hydrogenase-1 proteins; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="hydrogenase-1 protein nickel incorporation factor" /protein_id="AAC74062.1" /db_xref="GI:1787211" /db_xref="ASAP:ABE-0003296" /db_xref="UniProtKB/Swiss-Prot:P19932" /db_xref="EcoGene:EG10473" /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA DDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC QWLAEAAPT" gene 922466..924010 /gene="cbdA" /locus_tag="b0978" /gene_synonym="appC" /gene_synonym="cyxA" /gene_synonym="ECK0969" /gene_synonym="JW0960" /db_xref="EcoGene:EG11380" CDS 922466..924010 /gene="cbdA" /locus_tag="b0978" /gene_synonym="appC" /gene_synonym="cyxA" /gene_synonym="ECK0969" /gene_synonym="JW0960" /EC_number="1.10.3.-" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytochrome bd-II oxidase, subunit I" /protein_id="AAC74063.1" /db_xref="GI:1787212" /db_xref="ASAP:ABE-0003300" /db_xref="UniProtKB/Swiss-Prot:P26459" /db_xref="EcoGene:EG11380" /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALR SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE QDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG NREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ PTQQQG" gene 924022..925158 /gene="cbdB" /locus_tag="b0979" /gene_synonym="appB" /gene_synonym="cyxB" /gene_synonym="ECK0970" /gene_synonym="JW0961" /db_xref="EcoGene:EG11379" CDS 924022..925158 /gene="cbdB" /locus_tag="b0979" /gene_synonym="appB" /gene_synonym="cyxB" /gene_synonym="ECK0970" /gene_synonym="JW0961" /EC_number="1.10.3.-" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="probable third cytochrome oxidase, subunit II; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytochrome bd-II oxidase, subunit II" /protein_id="AAC74064.1" /db_xref="GI:1787213" /db_xref="ASAP:ABE-0003302" /db_xref="UniProtKB/Swiss-Prot:P26458" /db_xref="EcoGene:EG11379" /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY" gene 925171..925263 /gene="cbdX" /locus_tag="b4592" /gene_synonym="appX" /gene_synonym="ECK4402" /gene_synonym="yccB" /db_xref="EcoGene:EG11114" CDS 925171..925263 /gene="cbdX" /locus_tag="b4592" /gene_synonym="appX" /gene_synonym="ECK4402" /gene_synonym="yccB" /codon_start=1 /transl_table=11 /product="putative cytochrome bd-II oxidase subunit" /protein_id="ABP93439.1" /db_xref="GI:145693112" /db_xref="UniProtKB/Swiss-Prot:P24244" /db_xref="EcoGene:EG11114" /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS" repeat_region 925269..925304 /note="REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 925343..926641 /gene="appA" /locus_tag="b0980" /gene_synonym="ECK0971" /gene_synonym="JW0963" /db_xref="EcoGene:EG10049" CDS 925343..926641 /gene="appA" /locus_tag="b0980" /gene_synonym="ECK0971" /gene_synonym="JW0963" /EC_number="3.1.3.2" /EC_number="3.1.3.26" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006793 - phosphorus metabolic process; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="phosphoanhydride phosphorylase" /protein_id="AAC74065.1" /db_xref="GI:1787215" /db_xref="ASAP:ABE-0003305" /db_xref="UniProtKB/Swiss-Prot:P07102" /db_xref="EcoGene:EG10049" /translation="MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAP TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQS GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF YLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL" repeat_region 926711..926744 /note="REP90 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(926756..928936) /gene="etk" /locus_tag="b0981" /gene_synonym="ECK0972" /gene_synonym="JW0964" /gene_synonym="yccC" /db_xref="EcoGene:EG11826" CDS complement(926756..928936) /gene="etk" /locus_tag="b0981" /gene_synonym="ECK0972" /gene_synonym="JW0964" /gene_synonym="yccC" /EC_number="2.7.10.2" /experiment="N-terminus verified by Edman degradation: PMID 10369665" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="tyrosine-protein kinase, role in O-antigen capsule formation" /protein_id="AAC74066.1" /db_xref="GI:1787216" /db_xref="ASAP:ABE-0003309" /db_xref="UniProtKB/Swiss-Prot:P38134" /db_xref="EcoGene:EG11826" /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE" gene complement(928956..929402) /gene="etp" /locus_tag="b0982" /gene_synonym="ECK0973" /gene_synonym="JW5132" /gene_synonym="yccY" /db_xref="EcoGene:EG13727" CDS complement(928956..929402) /gene="etp" /locus_tag="b0982" /gene_synonym="ECK0973" /gene_synonym="JW5132" /gene_synonym="yccY" /function="enzyme; Not classified" /note="putative phosphatase; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase" /protein_id="AAC74067.2" /db_xref="GI:87081812" /db_xref="ASAP:ABE-0003312" /db_xref="UniProtKB/Swiss-Prot:P0ACZ2" /db_xref="EcoGene:EG13727" /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR" gene complement(929390..930529) /gene="gfcE" /locus_tag="b0983" /gene_synonym="ECK0974" /gene_synonym="JW0966" /gene_synonym="yccZ" /db_xref="EcoGene:EG13728" CDS complement(929390..930529) /gene="gfcE" /locus_tag="b0983" /gene_synonym="ECK0974" /gene_synonym="JW0966" /gene_synonym="yccZ" /function="transport; Not classified" /note="putative function in exopolysaccharide production; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative O-antigen capsule outer membrane auxillary protein export channel" /protein_id="AAC74068.1" /db_xref="GI:1787218" /db_xref="ASAP:ABE-0003317" /db_xref="UniProtKB/Swiss-Prot:P0A932" /db_xref="EcoGene:EG13728" /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN" gene complement(930575..932671) /gene="gfcD" /locus_tag="b0984" /gene_synonym="ECK0975" /gene_synonym="JW0967" /gene_synonym="ymcA" /db_xref="EcoGene:EG13729" CDS complement(930575..932671) /gene="gfcD" /locus_tag="b0984" /gene_synonym="ECK0975" /gene_synonym="JW0967" /gene_synonym="ymcA" /codon_start=1 /transl_table=11 /product="putative O-antigen capsule production periplasmic protein" /protein_id="AAC74069.1" /db_xref="GI:1787219" /db_xref="ASAP:ABE-0003319" /db_xref="UniProtKB/Swiss-Prot:P75882" /db_xref="EcoGene:EG13729" /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMS GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG TAPGQSEPLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDACWALGVDVNYVKQRDWD NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK YQLYPMTAEREVPVGQ" gene complement(932671..933417) /gene="gfcC" /locus_tag="b0985" /gene_synonym="ECK0976" /gene_synonym="JW0968" /gene_synonym="ymcB" /db_xref="EcoGene:EG13730" CDS complement(932671..933417) /gene="gfcC" /locus_tag="b0985" /gene_synonym="ECK0976" /gene_synonym="JW0968" /gene_synonym="ymcB" /codon_start=1 /transl_table=11 /product="putative O-antigen capsule production periplasmic protein" /protein_id="AAC74070.1" /db_xref="GI:1787220" /db_xref="ASAP:ABE-0003321" /db_xref="UniProtKB/Swiss-Prot:P75883" /db_xref="EcoGene:EG13730" /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVEN VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL WLGFSAHVLPEKYADLNDQIVSVLTQRVPD" gene complement(933414..934058) /gene="gfcB" /locus_tag="b0986" /gene_synonym="ECK0977" /gene_synonym="JW0969" /gene_synonym="ymcC" /db_xref="EcoGene:EG13731" CDS complement(933414..934058) /gene="gfcB" /locus_tag="b0986" /gene_synonym="ECK0977" /gene_synonym="JW0969" /gene_synonym="ymcC" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="O-antigen capsule production lipoprotein" /protein_id="AAC74071.1" /db_xref="GI:1787221" /db_xref="ASAP:ABE-0003323" /db_xref="UniProtKB/Swiss-Prot:P75884" /db_xref="EcoGene:EG13731" /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP" gene complement(934165..934470) /gene="gfcA" /locus_tag="b0987" /gene_synonym="ECK0978" /gene_synonym="JW5133" /gene_synonym="ymcD" /db_xref="EcoGene:EG13732" CDS complement(934165..934470) /gene="gfcA" /locus_tag="b0987" /gene_synonym="ECK0978" /gene_synonym="JW5133" /gene_synonym="ymcD" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="O-antigen capsule production threonine-rich inner membrane protein" /protein_id="AAC74072.2" /db_xref="GI:87081813" /db_xref="ASAP:ABE-0003325" /db_xref="UniProtKB/Swiss-Prot:P75885" /db_xref="EcoGene:EG13732" /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR" mobile_element 934504..935271 /mobile_element_type="insertion sequence:IS1D" gene 934559..934834 /gene="insA" /locus_tag="b4516" /gene_synonym="ECK4531" /note="insA4" /db_xref="EcoGene:EG40001" CDS 934559..934834 /gene="insA" /locus_tag="b4516" /gene_synonym="ECK4531" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="ABD18646.1" /db_xref="GI:87081814" /db_xref="ASAP:ABE-0285037" /db_xref="UniProtKB/Swiss-Prot:P0CF10" /db_xref="EcoGene:EG40001" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" gene 934753..935256 /gene="insB1" /locus_tag="b0988" /gene_synonym="ECK0022" /db_xref="EcoGene:EG40002" CDS 934753..935256 /gene="insB1" /locus_tag="b0988" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="AAC74073.1" /db_xref="GI:1787223" /db_xref="ASAP:ABE-0003338" /db_xref="UniProtKB/Swiss-Prot:P57998" /db_xref="EcoGene:EG40002" /translation="MPGNSPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERYNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(935689..935901) /gene="cspH" /locus_tag="b0989" /gene_synonym="cspK" /gene_synonym="ECK0979" /gene_synonym="JW5134" /db_xref="EcoGene:EG14281" CDS complement(935689..935901) /gene="cspH" /locus_tag="b0989" /gene_synonym="cspK" /gene_synonym="ECK0979" /gene_synonym="JW5134" /function="phenotype; Not classified" /note="cold shock-like protein; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="stress protein, member of the CspA-family" /protein_id="AAC74074.1" /db_xref="GI:2367112" /db_xref="ASAP:ABE-0003341" /db_xref="UniProtKB/Swiss-Prot:P0A982" /db_xref="EcoGene:EG14281" /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV LIPGLRVEFCRVNGLRGPTAANVYLS" gene 936187..936399 /gene="cspG" /locus_tag="b0990" /gene_synonym="cspI" /gene_synonym="ECK0980" /gene_synonym="JW0974" /db_xref="EcoGene:EG14243" CDS 936187..936399 /gene="cspG" /locus_tag="b0990" /gene_synonym="cspI" /gene_synonym="ECK0980" /gene_synonym="JW0974" /function="phenotype; Not classified" /note="homolog of Salmonella cold shock protein; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="cold shock protein homolog, cold-inducible" /protein_id="AAC74075.1" /db_xref="GI:2367114" /db_xref="ASAP:ABE-0003346" /db_xref="UniProtKB/Swiss-Prot:P0A978" /db_xref="EcoGene:EG14243" /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT LNENQKVEFSIEQGQRGPAAANVVTL" gene 936573..936803 /gene="ymcE" /locus_tag="b0991" /gene_synonym="ECK0981" /gene_synonym="JW0975" /gene_synonym="sfa" /db_xref="EcoGene:EG13232" CDS 936573..936803 /gene="ymcE" /locus_tag="b0991" /gene_synonym="ECK0981" /gene_synonym="JW0975" /gene_synonym="sfa" /function="phenotype; Not classified" /note="suppresses fabA and ts growth mutation" /codon_start=1 /transl_table=11 /product="cold shock gene" /protein_id="AAC74076.1" /db_xref="GI:1787225" /db_xref="ASAP:ABE-0003349" /db_xref="UniProtKB/Swiss-Prot:P0AAA5" /db_xref="EcoGene:EG13232" /translation="MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGEM AYNISYLTRVPGTNTLLACCCLLRPEEVNSEY" gene 936793..936966 /gene="gnsA" /locus_tag="b4517" /gene_synonym="ECK0982" /gene_synonym="JW0976" /gene_synonym="sfa" /gene_synonym="yccL" /db_xref="EcoGene:EG13233" CDS 936793..936966 /gene="gnsA" /locus_tag="b4517" /gene_synonym="ECK0982" /gene_synonym="JW0976" /gene_synonym="sfa" /gene_synonym="yccL" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative phosphatidylethanolamine synthesis regulator" /protein_id="ABD18647.1" /db_xref="GI:87081815" /db_xref="ASAP:ABE-0285038" /db_xref="UniProtKB/Swiss-Prot:P0AC92" /db_xref="EcoGene:EG13233" /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM TGLESYDVKIKIM" gene complement(937015..938088) /gene="yccM" /locus_tag="b0992" /gene_synonym="ECK0983" /gene_synonym="JW0977" /db_xref="EcoGene:EG13234" CDS complement(937015..938088) /gene="yccM" /locus_tag="b0992" /gene_synonym="ECK0983" /gene_synonym="JW0977" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S membrane protein" /protein_id="AAC74077.1" /db_xref="GI:1787226" /db_xref="ASAP:ABE-0003351" /db_xref="UniProtKB/Swiss-Prot:P52636" /db_xref="EcoGene:EG13234" /translation="MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNI YIAITFWYWVRYYETASSTTFVARPGGIEGWLPIAGLMNLKYSLVTGQLPSVHAAAML LLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYL LLSFFIYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFI RHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTV ECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAG VWQSPVPEELYRRLIPQAPMIGH" gene complement(938160..940904) /gene="torS" /locus_tag="b0993" /gene_synonym="ECK0984" /gene_synonym="JW5135" /gene_synonym="yccI" /db_xref="EcoGene:EG12617" CDS complement(938160..940904) /gene="torS" /locus_tag="b0993" /gene_synonym="ECK0984" /gene_synonym="JW5135" /gene_synonym="yccI" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hybrid sensory histidine kinase in two-component regulatory system with TorR" /protein_id="AAC74078.2" /db_xref="GI:87081816" /db_xref="ASAP:ABE-0003354" /db_xref="UniProtKB/Swiss-Prot:P39453" /db_xref="EcoGene:EG12617" /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ GFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQAN NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM NLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG RLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVI TNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL RLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDID GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK RAAHQLKSSCSSLGMHIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI " gene 940987..942015 /gene="torT" /locus_tag="b0994" /gene_synonym="ECK0985" /gene_synonym="JW0979" /gene_synonym="yccH" /db_xref="EcoGene:EG12616" CDS 940987..942015 /gene="torT" /locus_tag="b0994" /gene_synonym="ECK0985" /gene_synonym="JW0979" /gene_synonym="yccH" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="part of regulation of tor operon, periplasmic; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="periplasmic sensory protein associated with the TorRS two-component regulatory system" /protein_id="AAC74079.1" /db_xref="GI:1787228" /db_xref="ASAP:ABE-0003360" /db_xref="UniProtKB/Swiss-Prot:P38683" /db_xref="EcoGene:EG12616" /translation="MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRA WKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWG AEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQE MLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASD QMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFY QHTSAAKK" gene complement(941988..942680) /gene="torR" /locus_tag="b0995" /gene_synonym="ECK0986" /gene_synonym="JW0980" /db_xref="EcoGene:EG12615" CDS complement(941988..942680) /gene="torR" /locus_tag="b0995" /gene_synonym="ECK0986" /gene_synonym="JW0980" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 8083154" /note="response transcriptional regulator for torA (sensor TorS); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with TorS" /protein_id="AAC74080.1" /db_xref="GI:1787229" /db_xref="ASAP:ABE-0003362" /db_xref="UniProtKB/Swiss-Prot:P38684" /db_xref="EcoGene:EG12615" /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ HGEGYFLAADVC" gene 942810..943982 /gene="torC" /locus_tag="b0996" /gene_synonym="ECK0987" /gene_synonym="JW0981" /db_xref="EcoGene:EG11815" CDS 942810..943982 /gene="torC" /locus_tag="b0996" /gene_synonym="ECK0987" /gene_synonym="JW0981" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="trimethylamine N-oxide reductase, cytochrome c-type subunit; GO_component: GO:0042597 - periplasmic space; GO_function: GO:0009055 - electron carrier activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit" /protein_id="AAC74081.1" /db_xref="GI:1787230" /db_xref="ASAP:ABE-0003370" /db_xref="UniProtKB/Swiss-Prot:P33226" /db_xref="EcoGene:EG11815" /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG APEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK" gene 943982..946528 /gene="torA" /locus_tag="b0997" /gene_synonym="ECK0988" /gene_synonym="JW0982" /db_xref="EcoGene:EG11814" CDS 943982..946528 /gene="torA" /locus_tag="b0997" /gene_synonym="ECK0988" /gene_synonym="JW0982" /EC_number="1.6.6.9" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="trimethylamine N-oxide reductase subunit; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="trimethylamine N-oxide (TMAO) reductase I, catalytic subunit" /protein_id="AAC74082.1" /db_xref="GI:1787231" /db_xref="ASAP:ABE-0003372" /db_xref="UniProtKB/Swiss-Prot:P33225" /db_xref="EcoGene:EG11814" /translation="MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAAT DAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRY PMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGW QSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLV LQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTH EYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEK DGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLA AMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIP IARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVI AIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDI FRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFD HPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGG PGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDV VRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIG TSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS" gene 946525..947124 /gene="torD" /locus_tag="b0998" /gene_synonym="ECK0989" /gene_synonym="JW0983" /db_xref="EcoGene:EG12195" CDS 946525..947124 /gene="torD" /locus_tag="b0998" /gene_synonym="ECK0989" /gene_synonym="JW0983" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="part of trimethylamine-N-oxide oxidoreductase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="TorA-maturation chaperone" /protein_id="AAC74083.1" /db_xref="GI:1787232" /db_xref="ASAP:ABE-0003374" /db_xref="UniProtKB/Swiss-Prot:P36662" /db_xref="EcoGene:EG12195" /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL KSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA LWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR" repeat_region 947133..947266 /note="REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(947276..947581) /gene="cbpM" /locus_tag="b0999" /gene_synonym="ECK0990" /gene_synonym="JW0984" /gene_synonym="yccD" /db_xref="EcoGene:EG12194" CDS complement(947276..947581) /gene="cbpM" /locus_tag="b0999" /gene_synonym="ECK0990" /gene_synonym="JW0984" /gene_synonym="yccD" /codon_start=1 /transl_table=11 /product="modulator of CbpA co-chaperone" /protein_id="AAC74084.1" /db_xref="GI:1787234" /db_xref="ASAP:ABE-0003377" /db_xref="UniProtKB/Swiss-Prot:P63264" /db_xref="EcoGene:EG12194" /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP" gene complement(947581..948501) /gene="cbpA" /locus_tag="b1000" /gene_synonym="ECK0991" /gene_synonym="JW0985" /db_xref="EcoGene:EG12193" CDS complement(947581..948501) /gene="cbpA" /locus_tag="b1000" /gene_synonym="ECK0991" /gene_synonym="JW0985" /function="factor; Chaperones" /experiment="N-terminus verified by Edman degradation: PMID 8302830" /note="curved DNA-binding protein; functions closely related to DnaJ; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="DnaK co-chaperone; curved DNA-binding protein" /protein_id="AAC74085.1" /db_xref="GI:1787235" /db_xref="ASAP:ABE-0003379" /db_xref="UniProtKB/Swiss-Prot:P36659" /db_xref="EcoGene:EG12193" /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF GQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP PKPDENTAALWQQLADAQSSFDPRKDWGKA" gene 948762..950018 /gene="yccE" /locus_tag="b1001" /gene_synonym="ECK0992" /gene_synonym="JW0986" /db_xref="EcoGene:EG12196" CDS 948762..950018 /gene="yccE" /locus_tag="b1001" /gene_synonym="ECK0992" /gene_synonym="JW0986" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74086.1" /db_xref="GI:1787236" /db_xref="ASAP:ABE-0003384" /db_xref="UniProtKB/Swiss-Prot:P36661" /db_xref="EcoGene:EG12196" /translation="MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVC FMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSG GITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFD DENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAIL VLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQS DNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRI KAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPP ELFAQAYKLNNKEMNAQLDYLNRYAI" gene 950311..951552 /gene="agp" /locus_tag="b1002" /gene_synonym="ECK0993" /gene_synonym="JW0987" /db_xref="EcoGene:EG10033" CDS 950311..951552 /gene="agp" /locus_tag="b1002" /gene_synonym="ECK0993" /gene_synonym="JW0987" /EC_number="3.1.3.10" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="periplasmic glucose-1-phosphatase; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006006 - glucose metabolic process" /codon_start=1 /transl_table=11 /product="glucose-1-phosphatase/inositol phosphatase" /protein_id="AAC74087.1" /db_xref="GI:1787237" /db_xref="ASAP:ABE-0003388" /db_xref="UniProtKB/Swiss-Prot:P19926" /db_xref="EcoGene:EG10033" /translation="MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRA PLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAF SEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQE PGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTS PEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNE RTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCP IDADGFCPMDKFDSVLNEAVK" gene complement(951590..951817) /gene="yccJ" /locus_tag="b1003" /gene_synonym="ECK0994" /gene_synonym="JW0988" /db_xref="EcoGene:EG12703" CDS complement(951590..951817) /gene="yccJ" /locus_tag="b1003" /gene_synonym="ECK0994" /gene_synonym="JW0988" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74088.1" /db_xref="GI:1787238" /db_xref="ASAP:ABE-0003390" /db_xref="UniProtKB/Swiss-Prot:P0AB14" /db_xref="EcoGene:EG12703" /translation="MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWE EGSDEVLVKAFAKTDKDSLFWGEQTIERKNV" gene complement(951838..952434) /gene="wrbA" /locus_tag="b1004" /gene_synonym="ECK0995" /gene_synonym="JW0989" /db_xref="EcoGene:EG11540" CDS complement(951838..952434) /gene="wrbA" /locus_tag="b1004" /gene_synonym="ECK0995" /gene_synonym="JW0989" /function="enzyme; Not classified" /note="flavoprotein WrbA (Trp repressor binding protein); GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="NAD(P)H:quinone oxidoreductase" /protein_id="AAC74089.1" /db_xref="GI:1787239" /db_xref="ASAP:ABE-0003392" /db_xref="UniProtKB/Swiss-Prot:P0A8G6" /db_xref="EcoGene:EG11540" /translation="MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMP PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGA LYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPY GATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG" gene 952807..952980 /gene="ymdF" /locus_tag="b4518" /gene_synonym="ECK0996" /gene_synonym="JW5136" /db_xref="EcoGene:EG14358" CDS 952807..952980 /gene="ymdF" /locus_tag="b4518" /gene_synonym="ECK0996" /gene_synonym="JW5136" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="KGG family protein" /protein_id="AAC74090.2" /db_xref="GI:87081817" /db_xref="ASAP:ABE-0285039" /db_xref="UniProtKB/Swiss-Prot:P56614" /db_xref="EcoGene:EG14358" /translation="MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAG KKGGKSSHGKSDN" repeat_region 953080..953177 /note="RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(953237..954565) /gene="rutG" /locus_tag="b1006" /gene_synonym="ECK0997" /gene_synonym="JW5137" /gene_synonym="ycdG" /db_xref="EcoGene:EG13853" CDS complement(953237..954565) /gene="rutG" /locus_tag="b1006" /gene_synonym="ECK0997" /gene_synonym="JW5137" /gene_synonym="ycdG" /function="transport; Pyrimidine nitrogen catabolism" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="pyrimidine permease" /protein_id="AAC74091.2" /db_xref="GI:87081818" /db_xref="ASAP:ABE-0003401" /db_xref="UniProtKB/Swiss-Prot:P75892" /db_xref="EcoGene:EG13853" /translation="MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMF GATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNG QGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAP IAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLG LGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGR NMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAML LGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTL VLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP" gene complement(954586..955080) /gene="rutF" /locus_tag="b1007" /gene_synonym="ECK0998" /gene_synonym="JW5138" /gene_synonym="ycdH" /db_xref="EcoGene:EG13854" CDS complement(954586..955080) /gene="rutF" /locus_tag="b1007" /gene_synonym="ECK0998" /gene_synonym="JW5138" /gene_synonym="ycdH" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="flavin:NADH reductase" /protein_id="AAC74092.2" /db_xref="GI:87081819" /db_xref="ASAP:ABE-0003403" /db_xref="UniProtKB/Swiss-Prot:P75893" /db_xref="EcoGene:EG13854" /translation="MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTD TPPTLLVCLNRGASVWPAFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQT GVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALM RPAC" gene complement(955091..955681) /gene="rutE" /locus_tag="b1008" /gene_synonym="ECK0999" /gene_synonym="JW0993" /gene_synonym="ycdI" /db_xref="EcoGene:EG13855" CDS complement(955091..955681) /gene="rutE" /locus_tag="b1008" /gene_synonym="ECK0999" /gene_synonym="JW0993" /gene_synonym="ycdI" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="putative malonic semialdehyde reductase" /protein_id="AAC74093.1" /db_xref="GI:1787243" /db_xref="ASAP:ABE-0003407" /db_xref="UniProtKB/Swiss-Prot:P75894" /db_xref="EcoGene:EG13855" /translation="MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGP TSANCSPARIVFTRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFP HGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFT GSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL" gene complement(955691..956491) /gene="rutD" /locus_tag="b1009" /gene_synonym="ECK1000" /gene_synonym="JW0994" /gene_synonym="ycdJ" /db_xref="EcoGene:EG13856" CDS complement(955691..956491) /gene="rutD" /locus_tag="b1009" /gene_synonym="ECK1000" /gene_synonym="JW0994" /gene_synonym="ycdJ" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="putative reactive intermediate detoxifying aminoacrylate hydrolase" /protein_id="AAC74094.1" /db_xref="GI:1787244" /db_xref="ASAP:ABE-0003410" /db_xref="UniProtKB/Swiss-Prot:P75895" /db_xref="EcoGene:EG13856" /translation="MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVC YDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYP ASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPR LEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSS ELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL" gene complement(956499..956885) /gene="rutC" /locus_tag="b1010" /gene_synonym="ECK1001" /gene_synonym="JW0995" /gene_synonym="ycdK" /db_xref="EcoGene:EG13857" CDS complement(956499..956885) /gene="rutC" /locus_tag="b1010" /gene_synonym="ECK1001" /gene_synonym="JW0995" /gene_synonym="ycdK" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity" /protein_id="AAC74095.1" /db_xref="GI:1787245" /db_xref="ASAP:ABE-0003412" /db_xref="UniProtKB/Swiss-Prot:P0AFQ5" /db_xref="EcoGene:EG13857" /translation="MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLF ADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP ARFCIQCGLVKPDALVEIATIAHIAK" gene complement(956897..957589) /gene="rutB" /locus_tag="b1011" /gene_synonym="ECK1002" /gene_synonym="JW5139" /gene_synonym="ycdL" /db_xref="EcoGene:EG13858" CDS complement(956897..957589) /gene="rutB" /locus_tag="b1011" /gene_synonym="ECK1002" /gene_synonym="JW5139" /gene_synonym="ycdL" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="ureidoacrylate amidohydrolase" /protein_id="AAC74096.2" /db_xref="GI:87081820" /db_xref="ASAP:ABE-0003414" /db_xref="UniProtKB/Swiss-Prot:P75897" /db_xref="EcoGene:EG13858" /translation="MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVS TTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQP QLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTG IATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFC DALSPTSFAHIA" gene complement(957589..958737) /gene="rutA" /locus_tag="b1012" /gene_synonym="ECK1003" /gene_synonym="JW0997" /gene_synonym="ycdM" /db_xref="EcoGene:EG13859" CDS complement(957589..958737) /gene="rutA" /locus_tag="b1012" /gene_synonym="ECK1003" /gene_synonym="JW0997" /gene_synonym="ycdM" /function="enzyme; Pyrimidine nitrogen catabolism" /codon_start=1 /transl_table=11 /product="pyrimidine oxygenase, FMN-dependent" /protein_id="AAC74097.1" /db_xref="GI:1787247" /db_xref="ASAP:ABE-0003416" /db_xref="UniProtKB/Swiss-Prot:P75898" /db_xref="EcoGene:EG13859" /translation="MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMP TFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQI YATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRY DYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAR YADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWE HYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARML DEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA" gene 958968..959606 /gene="rutR" /locus_tag="b1013" /gene_synonym="ECK1004" /gene_synonym="JW0998" /gene_synonym="ycdC" /db_xref="EcoGene:EG12301" CDS 958968..959606 /gene="rutR" /locus_tag="b1013" /gene_synonym="ECK1004" /gene_synonym="JW0998" /gene_synonym="ycdC" /function="regulator; Pyrimidine nitrogen catabolism" /note="hypothetical transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="rut operon transcriptional repressor for" /protein_id="AAC74098.1" /db_xref="GI:1787249" /db_xref="ASAP:ABE-0003422" /db_xref="UniProtKB/Swiss-Prot:P0ACU2" /db_xref="EcoGene:EG12301" /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR" repeat_region 959611..959638 /note="REP93 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(959646..963608) /gene="putA" /locus_tag="b1014" /gene_synonym="ECK1005" /gene_synonym="JW0999" /gene_synonym="poaA" /gene_synonym="putC" /db_xref="EcoGene:EG10801" CDS complement(959646..963608) /gene="putA" /locus_tag="b1014" /gene_synonym="ECK1005" /gene_synonym="JW0999" /gene_synonym="poaA" /gene_synonym="putC" /EC_number="1.2.1.88" /EC_number="1.5.5.2" /function="enzyme; Degradation of small molecules: Amino acids" /note="proline dehydrogenase, P5C dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase" /protein_id="AAC74099.1" /db_xref="GI:1787250" /db_xref="ASAP:ABE-0003424" /db_xref="UniProtKB/Swiss-Prot:P09546" /db_xref="EcoGene:EG10801" /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ EGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGK LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLEISLDLLEKLCFEPE LAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPR EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGS TEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYN RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAKYPVDAQLKAALTQPLNAL REWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS DQLRALCEAVAARDGTIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG " gene 964031..965539 /gene="putP" /locus_tag="b1015" /gene_synonym="ECK1006" /gene_synonym="JW1001" /gene_synonym="putC" /db_xref="EcoGene:EG10802" CDS 964031..965539 /gene="putP" /locus_tag="b1015" /gene_synonym="ECK1006" /gene_synonym="JW1001" /gene_synonym="putC" /function="transport; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 1567896" /note="major sodium/proline symporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0005298 - proline:sodium symporter activity; GO_process: GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="proline:sodium symporter" /protein_id="AAC74100.1" /db_xref="GI:1787251" /db_xref="ASAP:ABE-0003433" /db_xref="UniProtKB/Swiss-Prot:P07117" /db_xref="EcoGene:EG10802" /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT WMILCLAGAVAVGFFGIAYFNDHPALAGAVNQNAERVFIELAQILFNPWIAGILLSAI LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES" repeat_region 965838..965871 /note="REP94 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 966082..966911 /gene="efeU" /locus_tag="b4490" /gene_synonym="ECK1007" /gene_synonym="JW1002" /gene_synonym="JW5141" /gene_synonym="ycdN" /pseudo /db_xref="EcoGene:EG13860" CDS join(966082..966186,966186..966911) /gene="efeU" /locus_tag="b4490" /gene_synonym="ECK1007" /gene_synonym="JW1002" /gene_synonym="JW5141" /gene_synonym="ycdN" /note="ferrous iron permease (pseudogene)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003441" /db_xref="ASAP:ABE-0003443" /db_xref="ASAP:ABE-0285091" /db_xref="UniProtKB/Swiss-Prot:P75901" /db_xref="EcoGene:EG13860" gene 966969..968096 /gene="efeO" /locus_tag="b1018" /gene_synonym="ECK1008" /gene_synonym="JW1003" /gene_synonym="ycdO" /db_xref="EcoGene:EG13861" CDS 966969..968096 /gene="efeO" /locus_tag="b1018" /gene_synonym="ECK1008" /gene_synonym="JW1003" /gene_synonym="ycdO" /codon_start=1 /transl_table=11 /product="inactive ferrous ion transporter EfeUOB" /protein_id="AAC74103.1" /db_xref="GI:1787254" /db_xref="ASAP:ABE-0003448" /db_xref="UniProtKB/Swiss-Prot:P0AB24" /db_xref="EcoGene:EG13861" /translation="MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY RTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD" gene 968102..969373 /gene="efeB" /locus_tag="b1019" /gene_synonym="ECK1009" /gene_synonym="JW1004" /gene_synonym="ycdB" /db_xref="EcoGene:EG11735" CDS 968102..969373 /gene="efeB" /locus_tag="b1019" /gene_synonym="ECK1009" /gene_synonym="JW1004" /gene_synonym="ycdB" /codon_start=1 /transl_table=11 /product="deferrrochelatase, periplasmic" /protein_id="AAC74104.1" /db_xref="GI:1787255" /db_xref="ASAP:ABE-0003451" /db_xref="UniProtKB/Swiss-Prot:P31545" /db_xref="EcoGene:EG11735" /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE EYVKPIGGGYFFALPGVKDANDYFGSALLRV" repeat_region 969408..969493 /note="REP95 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 969718..970782 /gene="phoH" /locus_tag="b1020" /gene_synonym="ECK1010" /gene_synonym="JW1005" /gene_synonym="psiH" /db_xref="EcoGene:EG11734" CDS 969718..970782 /gene="phoH" /locus_tag="b1020" /gene_synonym="ECK1010" /gene_synonym="JW1005" /gene_synonym="psiH" /function="regulator; Central intermediary metabolism: Phosphorus compounds" /experiment="N-terminus verified by Edman degradation: PMID 8444794" /note="PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006793 - phosphorus metabolic process; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="ATP-binding protein; putative PhoH family P-loop ATPase" /protein_id="AAC74105.1" /db_xref="GI:1787257" /db_xref="ASAP:ABE-0003458" /db_xref="UniProtKB/Swiss-Prot:P0A9K1" /db_xref="EcoGene:EG11734" /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA RREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPILARNEAQLHYL KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR FGKEDCVRSALCQRTLHAYS" gene complement(970832..971245) /gene="pgaD" /locus_tag="b1021" /gene_synonym="ECK1011" /gene_synonym="hmsS" /gene_synonym="JW1006" /gene_synonym="ycdP" /db_xref="EcoGene:EG13862" CDS complement(970832..971245) /gene="pgaD" /locus_tag="b1021" /gene_synonym="ECK1011" /gene_synonym="hmsS" /gene_synonym="JW1006" /gene_synonym="ycdP" /function="enzyme; Surface polysaccharides and antigens" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization" /protein_id="AAC74106.1" /db_xref="GI:1787258" /db_xref="ASAP:ABE-0003460" /db_xref="UniProtKB/Swiss-Prot:P69432" /db_xref="EcoGene:EG13862" /translation="MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGY YWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIP DELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA" gene complement(971247..972572) /gene="pgaC" /locus_tag="b1022" /gene_synonym="ECK1012" /gene_synonym="hmsR" /gene_synonym="JW1007" /gene_synonym="ycdQ" /db_xref="EcoGene:EG13863" CDS complement(971247..972572) /gene="pgaC" /locus_tag="b1022" /gene_synonym="ECK1012" /gene_synonym="hmsR" /gene_synonym="JW1007" /gene_synonym="ycdQ" /function="enzyme; Surface polysaccharides and antigens" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase" /protein_id="AAC74107.1" /db_xref="GI:1787259" /db_xref="ASAP:ABE-0003464" /db_xref="UniProtKB/Swiss-Prot:P75905" /db_xref="EcoGene:EG13863" /translation="MINRIVSFFILCLVLCIPLCVAYFHSGELMMRFVFFWPFFMSIM WIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQRY ENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLV CIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIK RTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRA LCWILMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAF TCLVGFIIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLT SSLFWIIWFPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG" gene complement(972565..974583) /gene="pgaB" /locus_tag="b1023" /gene_synonym="ECK1013" /gene_synonym="JW5142" /gene_synonym="ycdR" /db_xref="EcoGene:EG13864" CDS complement(972565..974583) /gene="pgaB" /locus_tag="b1023" /gene_synonym="ECK1013" /gene_synonym="JW5142" /gene_synonym="ycdR" /function="transport; Surface polysaccharides & antigens" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein" /protein_id="AAC74108.1" /db_xref="GI:1787260" /db_xref="ASAP:ABE-0003467" /db_xref="UniProtKB/Swiss-Prot:P75906" /db_xref="EcoGene:EG13864" /translation="MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPW PHNGFVAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGK PLPEKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVD REYFATWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYET AAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLES GLANASQLDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDR NIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTR SGVNIYAWMPVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLY EDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWAR FKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDW TAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQAISS QQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIRPEFSTAWYPKND" gene complement(974592..977015) /gene="pgaA" /locus_tag="b1024" /gene_synonym="ECK1014" /gene_synonym="JW1010" /gene_synonym="ycdS" /db_xref="EcoGene:EG13865" CDS complement(974592..977015) /gene="pgaA" /locus_tag="b1024" /gene_synonym="ECK1014" /gene_synonym="JW1010" /gene_synonym="ycdS" /function="transport; Surface polysaccharides & antigens" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein" /protein_id="AAC74109.1" /db_xref="GI:1787261" /db_xref="ASAP:ABE-0003469" /db_xref="UniProtKB/Swiss-Prot:P69434" /db_xref="EcoGene:EG13865" /translation="MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIE ARKGNTQPALSWFALKSALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYA AVAVAYRNLQQWQNSLTLWQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNS GAPDKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAI DDANLTPDIRADIHAELVRLSFMPTRSESERYAIADRALAQYAALEILWHDNPDRTAQ YQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQS IMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTP TSIPNDTWLQGHSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGW PRAAENELKKAEVIEPRNINLEVEQAWTALTLQEWQQAAVLTHDVVEREPQDPGVVRL KRAVDVHNLAELRIAGSTGIDAEGPDSGKHDVDLTTIVYSPPLKDNWRGFAGFGYADG QFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVFNHEHKPGARLSGWYDFNDNWRIGS QLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRKYGVSWAFTDFSDSNQRHEVSLE GQERIWSSPYLIVDFLPSLYYEQNTEHDTPYYNPIKTFDIVPAFEASHLLWRSYENSW EQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGATLRWEKRPYDGDREHNLY VEFDMTFRF" gene 977602..978959 /gene="ycdT" /locus_tag="b1025" /gene_synonym="ECK1015" /gene_synonym="JW5143" /db_xref="EcoGene:EG13866" CDS 977602..978959 /gene="ycdT" /locus_tag="b1025" /gene_synonym="ECK1015" /gene_synonym="JW5143" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, membrane-anchored" /protein_id="AAC74110.1" /db_xref="GI:1787262" /db_xref="ASAP:ABE-0003472" /db_xref="UniProtKB/Swiss-Prot:P75908" /db_xref="EcoGene:EG13866" /translation="MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYL MVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEER LTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFG GPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE SP" mobile_element complement(978970..980227) /mobile_element_type="insertion sequence:IS3D" gene complement(979000..979866) /gene="insF1" /locus_tag="b1026" /gene_synonym="ECK0299" /db_xref="EcoGene:EG40006" CDS complement(979000..979866) /gene="insF1" /locus_tag="b1026" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="AAC74111.1" /db_xref="GI:1787263" /db_xref="ASAP:ABE-0003475" /db_xref="UniProtKB/Swiss-Prot:P0CF82" /db_xref="EcoGene:EG40006" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(979863..980162) /gene="insE1" /locus_tag="b1027" /gene_synonym="ECK0298" /db_xref="EcoGene:EG40005" CDS complement(979863..980162) /gene="insE1" /locus_tag="b1027" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="AAC74112.2" /db_xref="GI:226510933" /db_xref="ASAP:ABE-0003477" /db_xref="UniProtKB/Swiss-Prot:P0CF69" /db_xref="EcoGene:EG40005" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 980230..980571 /gene="ymdE" /locus_tag="b1028" /gene_synonym="ECK1016" /gene_synonym="JW5145" /pseudo /db_xref="EcoGene:EG14357" CDS 980230..980571 /gene="ymdE" /locus_tag="b1028" /gene_synonym="ECK1016" /gene_synonym="JW5145" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003486" /db_xref="UniProtKB/Swiss-Prot:Q7DFV4" /db_xref="EcoGene:EG14357" gene 980568..981554 /gene="ycdU" /locus_tag="b1029" /gene_synonym="ECK1017" /gene_synonym="JW1015" /db_xref="EcoGene:EG13867" CDS 980568..981554 /gene="ycdU" /locus_tag="b1029" /gene_synonym="ECK1017" /gene_synonym="JW1015" /codon_start=1 /transl_table=11 /product="putative inner membrane protein" /protein_id="AAC74114.1" /db_xref="GI:1787267" /db_xref="ASAP:ABE-0003489" /db_xref="UniProtKB/Swiss-Prot:P75910" /db_xref="EcoGene:EG13867" /translation="MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDI GVVSGILALVLYNFIFDLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLS LIMLSAMSWGLYQLLPSLYALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYK SLTRYVLLSVCISTVVNLLTISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLF FLRFSKRYAFLGRLFLQEIDLFFSSENALSTFFAKPLWLRLFILLVIEVMWITLVSVL ATLVEWRIWFEAYFLLCYVPCLIYYFFYCRFLWHNDFMMACDMYFRWGHFNK" gene complement(982290..982377) /gene="serX" /locus_tag="b1032" /gene_synonym="ECK1018" /gene_synonym="JWR0027" /db_xref="EcoGene:EG30097" tRNA complement(982290..982377) /gene="serX" /locus_tag="b1032" /gene_synonym="ECK1018" /gene_synonym="JWR0027" /product="tRNA-Ser" /note="anticodon: GGA" /db_xref="ASAP:ABE-0003498" /db_xref="EcoGene:EG30097" gene 982611..983549 /gene="ghrA" /locus_tag="b1033" /gene_synonym="ECK1019" /gene_synonym="JW5146" /gene_synonym="ycdW" /db_xref="EcoGene:EG13869" CDS 982611..983549 /gene="ghrA" /locus_tag="b1033" /gene_synonym="ECK1019" /gene_synonym="JW5146" /gene_synonym="ycdW" /EC_number="1.1.1.79" /function="enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 11237876" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="glyoxylate/hydroxypyruvate reductase A" /protein_id="AAC74117.2" /db_xref="GI:87081824" /db_xref="ASAP:ABE-0003503" /db_xref="UniProtKB/Swiss-Prot:P75913" /db_xref="EcoGene:EG13869" /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRF PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY" gene 983604..984341 /gene="ycdX" /locus_tag="b1034" /gene_synonym="ECK1020" /gene_synonym="JW1017" /db_xref="EcoGene:EG13870" CDS 983604..984341 /gene="ycdX" /locus_tag="b1034" /gene_synonym="ECK1020" /gene_synonym="JW1017" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /note="GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="AAC74118.1" /db_xref="GI:1787271" /db_xref="ASAP:ABE-0003508" /db_xref="UniProtKB/Swiss-Prot:P75914" /db_xref="EcoGene:EG13870" /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS SFLHSRKGSEDNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER ILNVSPRRLLNFLESRGMAPIAEFADL" gene 984365..984919 /gene="ycdY" /locus_tag="b1035" /gene_synonym="ECK1021" /gene_synonym="JW1018" /db_xref="EcoGene:EG13871" CDS 984365..984919 /gene="ycdY" /locus_tag="b1035" /gene_synonym="ECK1021" /gene_synonym="JW1018" /function="putative enzyme; Not classified" /note="putative oxidoreductase component" /codon_start=1 /transl_table=11 /product="redox enzyme maturation protein (REMP) chaperone for YcdX" /protein_id="AAC74119.1" /db_xref="GI:1787272" /db_xref="ASAP:ABE-0003511" /db_xref="UniProtKB/Swiss-Prot:P75915" /db_xref="EcoGene:EG13871" /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ DELLTRLQKSCDMTQVSADYNALFIGDECAVPPYRSAWVEGATEAEVRAFLSERGMPL ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW RTMAPLTRDAISAMWDELEEDSEE" gene 985021..985512 /gene="ycdZ" /locus_tag="b1036" /gene_synonym="ECK1022" /gene_synonym="JW5147" /gene_synonym="nupT" /db_xref="EcoGene:EG13872" CDS 985021..985512 /gene="ycdZ" /locus_tag="b1036" /gene_synonym="ECK1022" /gene_synonym="JW5147" /gene_synonym="nupT" /codon_start=1 /transl_table=11 /product="DUF1097 family inner membrane protein" /protein_id="AAC74120.2" /db_xref="GI:87081825" /db_xref="ASAP:ABE-0003514" /db_xref="UniProtKB/Swiss-Prot:P75916" /db_xref="EcoGene:EG13872" /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS FVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIK NKA" repeat_region 985546..985564 /note="REP96 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(985576..986409) /gene="csgG" /locus_tag="b1037" /gene_synonym="agfG" /gene_synonym="ECK1023" /gene_synonym="JW1020" /db_xref="EcoGene:EG13413" CDS complement(985576..986409) /gene="csgG" /locus_tag="b1037" /gene_synonym="agfG" /gene_synonym="ECK1023" /gene_synonym="JW1020" /function="structural component; Surface structures" /note="curli production assembly/transport component, 2nd curli operon; GO_component: GO:0009289 - pilus; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="curli production assembly/transport outer membrane lipoprotein" /protein_id="AAC74121.1" /db_xref="GI:1787274" /db_xref="ASAP:ABE-0003516" /db_xref="UniProtKB/Swiss-Prot:P0AEA2" /db_xref="EcoGene:EG13413" /translation="MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPA PTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQ NLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGE VGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPE S" gene complement(986436..986852) /gene="csgF" /locus_tag="b1038" /gene_synonym="agfF" /gene_synonym="ECK1024" /gene_synonym="JW1021" /db_xref="EcoGene:EG13412" CDS complement(986436..986852) /gene="csgF" /locus_tag="b1038" /gene_synonym="agfF" /gene_synonym="ECK1024" /gene_synonym="JW1021" /function="structural component; Surface structures" /note="curli production assembly/transport component, 2nd curli operon; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="curli nucleation outer membrane protein" /protein_id="AAC74122.1" /db_xref="GI:1787275" /db_xref="ASAP:ABE-0003519" /db_xref="UniProtKB/Swiss-Prot:P0AE98" /db_xref="EcoGene:EG13412" /translation="MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNS AQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIV DIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF" gene complement(986877..987266) /gene="csgE" /locus_tag="b1039" /gene_synonym="agfE" /gene_synonym="ECK1025" /gene_synonym="JW1022" /db_xref="EcoGene:EG13411" CDS complement(986877..987266) /gene="csgE" /locus_tag="b1039" /gene_synonym="agfE" /gene_synonym="ECK1025" /gene_synonym="JW1022" /function="structural component; Surface structures" /note="curli production assembly/transport component, 2nd curli operon; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="curlin secretion specificity factor" /protein_id="AAC74123.1" /db_xref="GI:1787276" /db_xref="ASAP:ABE-0003528" /db_xref="UniProtKB/Swiss-Prot:P0AE95" /db_xref="EcoGene:EG13411" /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFY RAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFAL IQTEEALNRRQINQALLSTGDLAHDEF" gene complement(987271..987921) /gene="csgD" /locus_tag="b1040" /gene_synonym="agfD" /gene_synonym="ECK1026" /gene_synonym="JW1023" /db_xref="EcoGene:EG13410" CDS complement(987271..987921) /gene="csgD" /locus_tag="b1040" /gene_synonym="agfD" /gene_synonym="ECK1026" /gene_synonym="JW1023" /function="putative regulator; Not classified" /note="putative 2-component transcriptional regulator for 2nd curli operon; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="csgBAC operon transcriptional regulator" /protein_id="AAC74124.1" /db_xref="GI:1787277" /db_xref="ASAP:ABE-0003530" /db_xref="UniProtKB/Swiss-Prot:P52106" /db_xref="EcoGene:EG13410" /translation="MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQ RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR" gene 988676..989131 /gene="csgB" /locus_tag="b1041" /gene_synonym="agfB" /gene_synonym="ECK1027" /gene_synonym="JW1024" /db_xref="EcoGene:EG12621" CDS 988676..989131 /gene="csgB" /locus_tag="b1041" /gene_synonym="agfB" /gene_synonym="ECK1027" /gene_synonym="JW1024" /function="structural component; Surface structures" /note="minor curlin subunit precursor, similar ro CsgA; GO_component: GO:0009289 - pilus; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="curlin nucleator protein, minor subunit in curli complex" /protein_id="AAC74125.1" /db_xref="GI:1787278" /db_xref="ASAP:ABE-0003534" /db_xref="UniProtKB/Swiss-Prot:P0ABK7" /db_xref="EcoGene:EG12621" /translation="MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFN QAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDA SISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR" gene 989172..989627 /gene="csgA" /locus_tag="b1042" /gene_synonym="agfA" /gene_synonym="ECK1028" /gene_synonym="JW1025" /db_xref="EcoGene:EG11489" CDS 989172..989627 /gene="csgA" /locus_tag="b1042" /gene_synonym="agfA" /gene_synonym="ECK1028" /gene_synonym="JW1025" /function="regulator; Surface structures" /note="curlin major subunit, coiled surface structures; cryptic; GO_component: GO:0009289 - pilus; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="curlin subunit, amyloid curli fibers, cryptic" /protein_id="AAC74126.1" /db_xref="GI:1787279" /db_xref="ASAP:ABE-0003537" /db_xref="UniProtKB/Swiss-Prot:P28307" /db_xref="EcoGene:EG11489" /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSE LNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSAT LDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY" gene 989686..990018 /gene="csgC" /locus_tag="b1043" /gene_synonym="agfC" /gene_synonym="ECK1029" /gene_synonym="JW1026" /gene_synonym="ycdE" /db_xref="EcoGene:EG13414" CDS 989686..990018 /gene="csgC" /locus_tag="b1043" /gene_synonym="agfC" /gene_synonym="ECK1029" /gene_synonym="JW1026" /gene_synonym="ycdE" /function="putative structure; Not classified" /note="putative curli production protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="curli assembly protein" /protein_id="AAC74127.1" /db_xref="GI:1787280" /db_xref="ASAP:ABE-0003542" /db_xref="UniProtKB/Swiss-Prot:P52107" /db_xref="EcoGene:EG13414" /translation="MNTLLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQIL SLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQ WPPSSEKS" gene 990139..990450 /gene="ymdA" /locus_tag="b1044" /gene_synonym="ECK1030" /gene_synonym="JW1031" /db_xref="EcoGene:EG13873" CDS 990139..990450 /gene="ymdA" /locus_tag="b1044" /gene_synonym="ECK1030" /gene_synonym="JW1031" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74128.1" /db_xref="GI:1787281" /db_xref="ASAP:ABE-0003545" /db_xref="UniProtKB/Swiss-Prot:P75917" /db_xref="EcoGene:EG13873" /translation="MFRPFLNSLMLGSLFFPFIAIAGSTVQGGVIHFYGQIVEPACDV STQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEY N" gene 990545..991078 /gene="ymdB" /locus_tag="b1045" /gene_synonym="ECK1031" /gene_synonym="JW1032" /db_xref="EcoGene:EG13874" CDS 990545..991078 /gene="ymdB" /locus_tag="b1045" /gene_synonym="ECK1031" /gene_synonym="JW1032" /note="putative polyprotein" /codon_start=1 /transl_table=11 /product="O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit" /protein_id="AAC74129.1" /db_xref="GI:1787283" /db_xref="ASAP:ABE-0003549" /db_xref="UniProtKB/Swiss-Prot:P0A8D6" /db_xref="EcoGene:EG13874" /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD EENAHLYERLLTQQGDE" gene 991080..992501 /gene="clsC" /locus_tag="b1046" /gene_synonym="ECK1032" /gene_synonym="JW5150" /gene_synonym="ymdC" /db_xref="EcoGene:EG13875" CDS 991080..992501 /gene="clsC" /locus_tag="b1046" /gene_synonym="ECK1032" /gene_synonym="JW5150" /gene_synonym="ymdC" /function="Enzyme; Macromolecule synthesis: Phospholipids" /note="putative synthase" /codon_start=1 /transl_table=11 /product="stationary phase cardiolipin synthase 3" /protein_id="AAC74130.2" /db_xref="GI:87081826" /db_xref="ASAP:ABE-0003551" /db_xref="UniProtKB/Swiss-Prot:P75919" /db_xref="EcoGene:EG13875" /translation="MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHT LDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEV RLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPL FSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHNDAM THRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMG SPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTNSLAANDVAVVHAGYARWRKK LLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKTFSIDGKTVFIGSFNFDPRST LLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDRWGRINWVDRHAKKEIILKKE PATSFWKRVMVRLASILPVEWLL" gene complement(992509..993666) /gene="opgC" /locus_tag="b1047" /gene_synonym="ECK1033" /gene_synonym="JW1034" /gene_synonym="mdoC" /gene_synonym="ymdD" /db_xref="EcoGene:EG13876" CDS complement(992509..993666) /gene="opgC" /locus_tag="b1047" /gene_synonym="ECK1033" /gene_synonym="JW1034" /gene_synonym="mdoC" /gene_synonym="ymdD" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009250 - glucan biosynthetic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="OPG biosynthetic transmembrane succinyltransferase" /protein_id="AAC74131.1" /db_xref="GI:1787285" /db_xref="ASAP:ABE-0003553" /db_xref="UniProtKB/Swiss-Prot:P75920" /db_xref="EcoGene:EG13876" /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAES SLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR" gene 994060..995595 /gene="opgG" /locus_tag="b1048" /gene_synonym="ECK1034" /gene_synonym="JW1035" /gene_synonym="mdoA" /gene_synonym="mdoG" /db_xref="EcoGene:EG11885" CDS 994060..995595 /gene="opgG" /locus_tag="b1048" /gene_synonym="ECK1034" /gene_synonym="JW1035" /gene_synonym="mdoA" /gene_synonym="mdoG" /function="enzyme; Osmoregulated periplasmic glucan (OPG) biosynthesis" /note="periplasmic glucans biosynthesis protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009250 - glucan biosynthetic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase" /protein_id="AAC74132.1" /db_xref="GI:1787286" /db_xref="ASAP:ABE-0003558" /db_xref="UniProtKB/Swiss-Prot:P33136" /db_xref="EcoGene:EG11885" /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPK SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY KFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP ANE" gene 995588..998131 /gene="opgH" /locus_tag="b1049" /gene_synonym="ECK1035" /gene_synonym="JW1037" /gene_synonym="mdoA" /gene_synonym="mdoH" /db_xref="EcoGene:EG11886" CDS 995588..998131 /gene="opgH" /locus_tag="b1049" /gene_synonym="ECK1035" /gene_synonym="JW1037" /gene_synonym="mdoA" /gene_synonym="mdoH" /function="enzyme; Osmoregulated periplasmic glucan (OPG) biosynthesis biosynthesis" /note="membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist" /protein_id="AAC74133.1" /db_xref="GI:1787287" /db_xref="ASAP:ABE-0003560" /db_xref="UniProtKB/Swiss-Prot:P62517" /db_xref="EcoGene:EG11886" /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ" repeat_region 998142..998239 /note="RIP97 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 998304..998531 /gene="yceK" /locus_tag="b1050" /gene_synonym="ECK1036" /gene_synonym="JW5151" /db_xref="EcoGene:EG12689" CDS 998304..998531 /gene="yceK" /locus_tag="b1050" /gene_synonym="ECK1036" /gene_synonym="JW5151" /codon_start=1 /transl_table=11 /product="outer membrane integrity lipoprotein" /protein_id="AAC74134.1" /db_xref="GI:1787288" /db_xref="ASAP:ABE-0003565" /db_xref="UniProtKB/Swiss-Prot:P0AB31" /db_xref="EcoGene:EG12689" /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE" gene complement(998532..998906) /gene="msyB" /locus_tag="b1051" /gene_synonym="ECK1037" /gene_synonym="JW1039" /db_xref="EcoGene:EG11338" CDS complement(998532..998906) /gene="msyB" /locus_tag="b1051" /gene_synonym="ECK1037" /gene_synonym="JW1039" /function="phenotype; Protein, peptide secretion" /note="acidic protein suppresses mutants lacking function of protein export" /codon_start=1 /transl_table=11 /product="multicopy suppressor of secY and secA" /protein_id="AAC74135.2" /db_xref="GI:87081827" /db_xref="ASAP:ABE-0003567" /db_xref="UniProtKB/Swiss-Prot:P25738" /db_xref="EcoGene:EG11338" /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE FQLEPPLDTEEGRAAADEWDER" gene complement(998989..1000215) /gene="mdtG" /locus_tag="b1053" /gene_synonym="ECK1038" /gene_synonym="JW1040" /gene_synonym="yceE" /db_xref="EcoGene:EG11343" CDS complement(998989..1000215) /gene="mdtG" /locus_tag="b1053" /gene_synonym="ECK1038" /gene_synonym="JW1040" /gene_synonym="yceE" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative drug efflux system protein" /protein_id="AAC74137.1" /db_xref="GI:1787291" /db_xref="ASAP:ABE-0003572" /db_xref="UniProtKB/Swiss-Prot:P25744" /db_xref="EcoGene:EG11343" /translation="MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQL GVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMG LAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPM AGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNP KLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAP RLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQT LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAV YSWNSLRRRRIPQVSN" repeat_region 1000351..1000377 /note="REP98 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1000387..1001307) /gene="lpxL" /locus_tag="b1054" /gene_synonym="ECK1039" /gene_synonym="htrB" /gene_synonym="JW1041" /gene_synonym="waaM" /db_xref="EcoGene:EG10464" CDS complement(1000387..1001307) /gene="lpxL" /locus_tag="b1054" /gene_synonym="ECK1039" /gene_synonym="htrB" /gene_synonym="JW1041" /gene_synonym="waaM" /EC_number="2.3.1.-" /function="factor; Adaptations, atypical conditions" /note="heat shock protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="lauryl-acyl carrier protein (ACP)-dependent acyltransferase" /protein_id="AAC74138.1" /db_xref="GI:1787292" /db_xref="ASAP:ABE-0003574" /db_xref="UniProtKB/Swiss-Prot:P0ACV0" /db_xref="EcoGene:EG10464" /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY" gene 1001532..1002584 /gene="yceA" /locus_tag="b1055" /gene_synonym="ECK1040" /gene_synonym="JW1042" /db_xref="EcoGene:EG11116" CDS 1001532..1002584 /gene="yceA" /locus_tag="b1055" /gene_synonym="ECK1040" /gene_synonym="JW1042" /note="GO_process: GO:0007049 - cell cycle" /codon_start=1 /transl_table=11 /product="putative rhodanese-related sulfurtransferase" /protein_id="AAC74139.1" /db_xref="GI:1787294" /db_xref="ASAP:ABE-0003581" /db_xref="UniProtKB/Swiss-Prot:P24188" /db_xref="EcoGene:EG11116" /translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGF NKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDS HTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNK SRGRLNTTLCIPDPTE" repeat_region 1002593..1002613 /note="REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1002626..1003201) /gene="yceI" /locus_tag="b1056" /gene_synonym="ECK1041" /gene_synonym="JW1043" /db_xref="EcoGene:EG11820" CDS complement(1002626..1003201) /gene="yceI" /locus_tag="b1056" /gene_synonym="ECK1041" /gene_synonym="JW1043" /codon_start=1 /transl_table=11 /product="periplasmic high pH-inducible lipid-binding protein" /protein_id="AAC74140.1" /db_xref="GI:1787295" /db_xref="ASAP:ABE-0003583" /db_xref="UniProtKB/Swiss-Prot:P0A8X2" /db_xref="EcoGene:EG11820" /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK IKLKDFNIKTDLGPASQEVDLIISVEGVQQK" gene complement(1003205..1003771) /gene="yceJ" /locus_tag="b1057" /gene_synonym="ECK1042" /gene_synonym="JW1044" /db_xref="EcoGene:EG12659" CDS complement(1003205..1003771) /gene="yceJ" /locus_tag="b1057" /gene_synonym="ECK1042" /gene_synonym="JW1044" /function="putative enzyme; Not classified" /note="GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="putative cytochrome b561" /protein_id="AAC74141.1" /db_xref="GI:1787296" /db_xref="ASAP:ABE-0003585" /db_xref="UniProtKB/Swiss-Prot:P75925" /db_xref="EcoGene:EG12659" /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGW YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLF AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG FMALKHHFIDKDDTLKRMLGKSSSDYGV" gene complement(1004032..1004172) /gene="yceO" /locus_tag="b1058" /gene_synonym="ECK1043" /gene_synonym="JW1045" /db_xref="EcoGene:EG14334" CDS complement(1004032..1004172) /gene="yceO" /locus_tag="b1058" /gene_synonym="ECK1043" /gene_synonym="JW1045" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74142.1" /db_xref="GI:1787297" /db_xref="ASAP:ABE-0003588" /db_xref="UniProtKB/Swiss-Prot:P64442" /db_xref="EcoGene:EG14334" /translation="MRPFLQEYLMRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVF YF" gene complement(1004193..1005311) /gene="solA" /locus_tag="b1059" /gene_synonym="ECK1044" /gene_synonym="JW1046" /db_xref="EcoGene:EG12669" CDS complement(1004193..1005311) /gene="solA" /locus_tag="b1059" /gene_synonym="ECK1044" /gene_synonym="JW1046" /EC_number="1.5.3.2" /function="putative enzyme; Not classified" /note="sarcosine oxidase-like protein" /codon_start=1 /transl_table=11 /product="N-methyltryptophan oxidase, FAD-binding" /protein_id="AAC74143.1" /db_xref="GI:1787298" /db_xref="ASAP:ABE-0003590" /db_xref="UniProtKB/Swiss-Prot:P40874" /db_xref="EcoGene:EG12669" /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEEDPIFVRSGVINLGPADSTFLAN VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK EAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRK VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV PFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ" gene complement(1005426..1005680) /gene="bssS" /locus_tag="b1060" /gene_synonym="ECK1045" /gene_synonym="JW5152" /gene_synonym="yceP" /db_xref="EcoGene:EG14335" CDS complement(1005426..1005680) /gene="bssS" /locus_tag="b1060" /gene_synonym="ECK1045" /gene_synonym="JW5152" /gene_synonym="yceP" /codon_start=1 /transl_table=11 /product="biofilm regulator" /protein_id="AAC74144.1" /db_xref="GI:1787299" /db_xref="ASAP:ABE-0003594" /db_xref="UniProtKB/Swiss-Prot:P0AB33" /db_xref="EcoGene:EG14335" /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT EVGQTLWLTTDVARQFISILEAGIAKIESGDFQVNEYRRH" gene complement(1005967..1006212) /gene="dinI" /locus_tag="b1061" /gene_synonym="ECK1046" /gene_synonym="JW1048" /db_xref="EcoGene:EG12670" CDS complement(1005967..1006212) /gene="dinI" /locus_tag="b1061" /gene_synonym="ECK1046" /gene_synonym="JW1048" /function="phenotype; Not classified" /note="damage-inducible protein I; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA damage-inducible protein I" /protein_id="AAC74145.1" /db_xref="GI:1787300" /db_xref="ASAP:ABE-0003599" /db_xref="UniProtKB/Swiss-Prot:P0ABR1" /db_xref="EcoGene:EG12670" /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY AAANNLSVIGATKEDKQRISEILQETWESADDWFVSE" gene complement(1006286..1007332) /gene="pyrC" /locus_tag="b1062" /gene_synonym="ECK1047" /gene_synonym="JW1049" /db_xref="EcoGene:EG10806" CDS complement(1006286..1007332) /gene="pyrC" /locus_tag="b1062" /gene_synonym="ECK1047" /gene_synonym="JW1049" /EC_number="3.5.2.3" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="dihydro-orotase" /protein_id="AAC74146.1" /db_xref="GI:1787301" /db_xref="ASAP:ABE-0003607" /db_xref="UniProtKB/Swiss-Prot:P05020" /db_xref="EcoGene:EG10806" /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAA KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIES VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV PFLAGETVRWSVKQ" gene complement(1007438..1007998) /gene="yceB" /locus_tag="b1063" /gene_synonym="ECK1048" /gene_synonym="JW1050" /db_xref="EcoGene:EG11117" CDS complement(1007438..1007998) /gene="yceB" /locus_tag="b1063" /gene_synonym="ECK1048" /gene_synonym="JW1050" /codon_start=1 /transl_table=11 /product="lipoprotein, DUF1439 family" /protein_id="AAC74147.1" /db_xref="GI:1787302" /db_xref="ASAP:ABE-0003611" /db_xref="UniProtKB/Swiss-Prot:P0AB26" /db_xref="EcoGene:EG11117" /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS QGEAMAKKLAKGIEVKPGEIVIPFTD" gene complement(1008132..1008779) /gene="grxB" /locus_tag="b1064" /gene_synonym="ECK1049" /gene_synonym="JW1051" /db_xref="EcoGene:EG12688" CDS complement(1008132..1008779) /gene="grxB" /locus_tag="b1064" /gene_synonym="ECK1049" /gene_synonym="JW1051" /function="carrier; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 7937896" /note="glutaredoxin 2" /codon_start=1 /transl_table=11 /product="glutaredoxin 2 (Grx2)" /protein_id="AAC74148.1" /db_xref="GI:1787303" /db_xref="ASAP:ABE-0003615" /db_xref="UniProtKB/Swiss-Prot:P0AC59" /db_xref="EcoGene:EG12688" /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI" gene complement(1008843..1010051) /gene="mdtH" /locus_tag="b1065" /gene_synonym="ECK1050" /gene_synonym="JW1052" /gene_synonym="yceL" /db_xref="EcoGene:EG13878" CDS complement(1008843..1010051) /gene="mdtH" /locus_tag="b1065" /gene_synonym="ECK1050" /gene_synonym="JW1052" /gene_synonym="yceL" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin" /protein_id="AAC74149.2" /db_xref="GI:87081828" /db_xref="ASAP:ABE-0003618" /db_xref="UniProtKB/Swiss-Prot:P69367" /db_xref="EcoGene:EG13878" /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR AARRLLERDA" gene 1010287..1010871 /gene="rimJ" /locus_tag="b1066" /gene_synonym="ECK1051" /gene_synonym="JW1053" /gene_synonym="tcp" /db_xref="EcoGene:EG10851" CDS 1010287..1010871 /gene="rimJ" /locus_tag="b1066" /gene_synonym="ECK1051" /gene_synonym="JW1053" /gene_synonym="tcp" /EC_number="2.3.1.128" /function="enzyme; Ribosomes - maturation and modification" /note="acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="ribosomal-protein-S5-alanine N-acetyltransferase" /protein_id="AAC74150.1" /db_xref="GI:1787305" /db_xref="ASAP:ABE-0003622" /db_xref="UniProtKB/Swiss-Prot:P0A948" /db_xref="EcoGene:EG10851" /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR" gene 1010882..1011529 /gene="yceH" /locus_tag="b1067" /gene_synonym="ECK1052" /gene_synonym="JW1054" /db_xref="EcoGene:EG11537" CDS 1010882..1011529 /gene="yceH" /locus_tag="b1067" /gene_synonym="ECK1052" /gene_synonym="JW1054" /codon_start=1 /transl_table=11 /product="UPF0502 family protein" /protein_id="AAC74151.1" /db_xref="GI:1787306" /db_xref="ASAP:ABE-0003625" /db_xref="UniProtKB/Swiss-Prot:P29217" /db_xref="EcoGene:EG11537" /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE NRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD" gene 1011531..1012454 /gene="yceM" /locus_tag="b1068" /gene_synonym="ECK1053" /gene_synonym="JW1055" /gene_synonym="mviM" /gene_synonym="mviS" /db_xref="EcoGene:EG13879" CDS 1011531..1012454 /gene="yceM" /locus_tag="b1068" /gene_synonym="ECK1053" /gene_synonym="JW1055" /gene_synonym="mviM" /gene_synonym="mviS" /function="putative factor; Not classified" /note="putative virulence factor" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74152.1" /db_xref="GI:1787307" /db_xref="ASAP:ABE-0003627" /db_xref="UniProtKB/Swiss-Prot:P75931" /db_xref="EcoGene:EG13879" /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALP ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC VQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE" gene 1012564..1014099 /gene="murJ" /locus_tag="b1069" /gene_synonym="ECK1054" /gene_synonym="JW1056" /gene_synonym="mviN" /gene_synonym="mviS" /gene_synonym="yceN" /db_xref="EcoGene:EG13880" CDS 1012564..1014099 /gene="murJ" /locus_tag="b1069" /gene_synonym="ECK1054" /gene_synonym="JW1056" /gene_synonym="mviN" /gene_synonym="mviS" /gene_synonym="yceN" /function="putative factor; Not classified" /note="putative virulence factor" /codon_start=1 /transl_table=11 /product="putative lipid II flippase" /protein_id="AAC74153.1" /db_xref="GI:1787309" /db_xref="ASAP:ABE-0003630" /db_xref="UniProtKB/Swiss-Prot:P0AF16" /db_xref="EcoGene:EG13880" /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPR INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR RTV" gene complement(1014139..1014555) /gene="flgN" /locus_tag="b1070" /gene_synonym="ECK1055" /gene_synonym="JW1057" /db_xref="EcoGene:EG12665" CDS complement(1014139..1014555) /gene="flgN" /locus_tag="b1070" /gene_synonym="ECK1055" /gene_synonym="JW1057" /function="phenotype; Surface structures" /note="protein of flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006457 - protein folding; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="export chaperone for FlgK and FlgL" /protein_id="AAC74154.1" /db_xref="GI:1787310" /db_xref="ASAP:ABE-0003632" /db_xref="UniProtKB/Swiss-Prot:P43533" /db_xref="EcoGene:EG12665" /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE QKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI" gene complement(1014560..1014853) /gene="flgM" /locus_tag="b1071" /gene_synonym="ECK1056" /gene_synonym="JW1058" /gene_synonym="mviS" /db_xref="EcoGene:EG12664" CDS complement(1014560..1014853) /gene="flgM" /locus_tag="b1071" /gene_synonym="ECK1056" /gene_synonym="JW1058" /gene_synonym="mviS" /function="factor; Surface structures" /note="anti-FliA (anti-sigma) factor; also known as RflB protein; GO_component: GO:0019861 - flagellum; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="anti-sigma factor for FliA (sigma 28)" /protein_id="AAC74155.1" /db_xref="GI:1787311" /db_xref="ASAP:ABE-0003634" /db_xref="UniProtKB/Swiss-Prot:P0AEM4" /db_xref="EcoGene:EG12664" /translation="MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLS DAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN" gene complement(1014929..1015588) /gene="flgA" /locus_tag="b1072" /gene_synonym="ECK1057" /gene_synonym="flaU" /gene_synonym="JW1059" /db_xref="EcoGene:EG20263" CDS complement(1014929..1015588) /gene="flgA" /locus_tag="b1072" /gene_synonym="ECK1057" /gene_synonym="flaU" /gene_synonym="JW1059" /function="putative structure; Surface structures" /note="flagellar biosynthesis; assembly of basal-body periplasmic P ring; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="assembly protein for flagellar basal-body periplasmic P ring" /protein_id="AAC74156.1" /db_xref="GI:1787312" /db_xref="ASAP:ABE-0003637" /db_xref="UniProtKB/Swiss-Prot:P75933" /db_xref="EcoGene:EG20263" /translation="MLIIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVR VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM PIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILIN L" gene 1015743..1016159 /gene="flgB" /locus_tag="b1073" /gene_synonym="ECK1058" /gene_synonym="flbA" /gene_synonym="JW1060" /db_xref="EcoGene:EG14266" CDS 1015743..1016159 /gene="flgB" /locus_tag="b1073" /gene_synonym="ECK1058" /gene_synonym="flbA" /gene_synonym="JW1060" /function="structural component; Surface structures" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod; GO_component: GO:0019861 - flagellum; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="AAC74157.1" /db_xref="GI:1787313" /db_xref="ASAP:ABE-0003641" /db_xref="UniProtKB/Swiss-Prot:P0ABW9" /db_xref="EcoGene:EG14266" /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDID FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDM DRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN" gene 1016163..1016567 /gene="flgC" /locus_tag="b1074" /gene_synonym="ECK1059" /gene_synonym="flaW" /gene_synonym="JW1061" /db_xref="EcoGene:EG14267" CDS 1016163..1016567 /gene="flgC" /locus_tag="b1074" /gene_synonym="ECK1059" /gene_synonym="flaW" /gene_synonym="JW1061" /function="structural component; Surface structures" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod; GO_component: GO:0019861 - flagellum; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="AAC74158.1" /db_xref="GI:1787314" /db_xref="ASAP:ABE-0003643" /db_xref="UniProtKB/Swiss-Prot:P0ABX2" /db_xref="EcoGene:EG14267" /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ" gene 1016579..1017274 /gene="flgD" /locus_tag="b1075" /gene_synonym="ECK1060" /gene_synonym="flaV" /gene_synonym="JW1062" /db_xref="EcoGene:EG14268" CDS 1016579..1017274 /gene="flgD" /locus_tag="b1075" /gene_synonym="ECK1060" /gene_synonym="flaV" /gene_synonym="JW1062" /function="putative structure; Surface structures" /note="flagellar biosynthesis, initiation of hook assembly; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar hook assembly protein" /protein_id="AAC74159.1" /db_xref="GI:1787315" /db_xref="ASAP:ABE-0003645" /db_xref="UniProtKB/Swiss-Prot:P75936" /db_xref="EcoGene:EG14268" /translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK NQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH SFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT YGTTTLDEVRQII" gene 1017299..1018507 /gene="flgE" /locus_tag="b1076" /gene_synonym="ECK1061" /gene_synonym="flaK" /gene_synonym="JW1063" /db_xref="EcoGene:EG14269" CDS 1017299..1018507 /gene="flgE" /locus_tag="b1076" /gene_synonym="ECK1061" /gene_synonym="flaK" /gene_synonym="JW1063" /function="structural component; Surface structures" /note="flagellar biosynthesis, hook protein; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar hook protein" /protein_id="AAC74160.1" /db_xref="GI:1787316" /db_xref="ASAP:ABE-0003647" /db_xref="UniProtKB/Swiss-Prot:P75937" /db_xref="EcoGene:EG14269" /translation="MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD QILNTLVNLR" gene 1018527..1019282 /gene="flgF" /locus_tag="b1077" /gene_synonym="ECK1062" /gene_synonym="flaX" /gene_synonym="JW1064" /db_xref="EcoGene:EG14270" CDS 1018527..1019282 /gene="flgF" /locus_tag="b1077" /gene_synonym="ECK1062" /gene_synonym="flaX" /gene_synonym="JW1064" /function="structural component; Surface structures" /note="flagellar biosynthesis, cell-proximal portion of basal-body rod; GO_component: GO:0019861 - flagellum; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar component of cell-proximal portion of basal-body rod" /protein_id="AAC74161.1" /db_xref="GI:1787317" /db_xref="ASAP:ABE-0003649" /db_xref="UniProtKB/Swiss-Prot:P75938" /db_xref="EcoGene:EG14270" /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV PVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRN GSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS DMIASARRFEMQMKVISSVDDNAGRANQLLSMS" repeat_region 1019311..1019408 /note="RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 1019454..1020236 /gene="flgG" /locus_tag="b1078" /gene_synonym="ECK1063" /gene_synonym="flaL" /gene_synonym="JW1065" /db_xref="EcoGene:EG14271" CDS 1019454..1020236 /gene="flgG" /locus_tag="b1078" /gene_synonym="ECK1063" /gene_synonym="flaL" /gene_synonym="JW1065" /function="structural component; Surface structures" /note="flagellar biosynthesis, cell-distal portion of basal-body rod; GO_component: GO:0019861 - flagellum; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar component of cell-distal portion of basal-body rod" /protein_id="AAC74162.1" /db_xref="GI:1787318" /db_xref="ASAP:ABE-0003652" /db_xref="UniProtKB/Swiss-Prot:P0ABX5" /db_xref="EcoGene:EG14271" /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL" gene 1020289..1020987 /gene="flgH" /locus_tag="b1079" /gene_synonym="ECK1064" /gene_synonym="flaY" /gene_synonym="JW5153" /db_xref="EcoGene:EG20264" CDS 1020289..1020987 /gene="flgH" /locus_tag="b1079" /gene_synonym="ECK1064" /gene_synonym="flaY" /gene_synonym="JW5153" /function="structural component; Surface structures" /note="flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019861 - flagellum; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar protein of basal-body outer-membrane L ring" /protein_id="AAC74163.1" /db_xref="GI:1787319" /db_xref="ASAP:ABE-0003654" /db_xref="UniProtKB/Swiss-Prot:P0A6S0" /db_xref="EcoGene:EG20264" /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN MGWLQRFFLNLSPM" gene 1020999..1022096 /gene="flgI" /locus_tag="b1080" /gene_synonym="ECK1065" /gene_synonym="flaM" /gene_synonym="JW1067" /db_xref="EcoGene:EG20265" CDS 1020999..1022096 /gene="flgI" /locus_tag="b1080" /gene_synonym="ECK1065" /gene_synonym="flaM" /gene_synonym="JW1067" /function="putative structural component; Surface structures" /note="homolog of Salmonella P-ring of flagella basal body; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="putative flagellar basal body protein" /protein_id="AAC74164.1" /db_xref="GI:1787320" /db_xref="ASAP:ABE-0003656" /db_xref="UniProtKB/Swiss-Prot:P0A6S3" /db_xref="EcoGene:EG20265" /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRA LNALGATPMDLMSILQSMQSAGCLRAKLEII" gene 1022096..1023037 /gene="flgJ" /locus_tag="b1081" /gene_synonym="ECK1066" /gene_synonym="flaZ" /gene_synonym="JW1068" /db_xref="EcoGene:EG14272" CDS 1022096..1023037 /gene="flgJ" /locus_tag="b1081" /gene_synonym="ECK1066" /gene_synonym="flaZ" /gene_synonym="JW1068" /function="structure; Surface structures; enzyme; Murein sacculus, peptidoglycan" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase" /protein_id="AAC74165.1" /db_xref="GI:1787321" /db_xref="ASAP:ABE-0003658" /db_xref="UniProtKB/Swiss-Prot:P75942" /db_xref="EcoGene:EG14272" /translation="MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMF VQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQ PLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPA QLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITT TEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAG YATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF" gene 1023103..1024746 /gene="flgK" /locus_tag="b1082" /gene_synonym="ECK1067" /gene_synonym="flaS" /gene_synonym="JW1069" /db_xref="EcoGene:EG11967" CDS 1023103..1024746 /gene="flgK" /locus_tag="b1082" /gene_synonym="ECK1067" /gene_synonym="flaS" /gene_synonym="JW1069" /function="structural component; Surface structures" /note="flagellar biosynthesis, hook-filament junction protein 1; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006457 - protein folding; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein 1" /protein_id="AAC74166.1" /db_xref="GI:1787323" /db_xref="ASAP:ABE-0003660" /db_xref="UniProtKB/Swiss-Prot:P33235" /db_xref="EcoGene:EG11967" /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQ ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR" gene 1024758..1025711 /gene="flgL" /locus_tag="b1083" /gene_synonym="ECK1068" /gene_synonym="flaT" /gene_synonym="JW1070" /db_xref="EcoGene:EG11545" CDS 1024758..1025711 /gene="flgL" /locus_tag="b1083" /gene_synonym="ECK1068" /gene_synonym="flaT" /gene_synonym="JW1070" /function="structural component; Surface structures" /note="flagellar biosynthesis; hook-filament junction protein; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006457 - protein folding; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar hook-filament junction protein" /protein_id="AAC74167.1" /db_xref="GI:1787324" /db_xref="ASAP:ABE-0003666" /db_xref="UniProtKB/Swiss-Prot:P29744" /db_xref="EcoGene:EG11545" /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI AASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS EADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMS DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK" gene complement(1025907..1029092) /gene="rne" /locus_tag="b1084" /gene_synonym="ams" /gene_synonym="ECK1069" /gene_synonym="hmp1" /gene_synonym="JW1071" /gene_synonym="smbB" /db_xref="EcoGene:EG10859" CDS complement(1025907..1029092) /gene="rne" /locus_tag="b1084" /gene_synonym="ams" /gene_synonym="ECK1069" /gene_synonym="hmp1" /gene_synonym="JW1071" /gene_synonym="smbB" /EC_number="3.1.4.-" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2011493" /note="RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="endoribonuclease; RNA-binding protein;RNA degradosome binding protein" /protein_id="AAC74168.1" /db_xref="GI:1787325" /db_xref="ASAP:ABE-0003668" /db_xref="UniProtKB/Swiss-Prot:P21513" /db_xref="EcoGene:EG10859" /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA QPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRR RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV VAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV EEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTH PEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPE VVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQR PTFAFEGKGAAGGHTATHHASAAPARPQPVE" gene 1029227..1029547 /gene="yceQ" /locus_tag="b1085" /gene_synonym="ECK1070" /gene_synonym="JW5154" /db_xref="EcoGene:EG14413" CDS 1029227..1029547 /gene="yceQ" /locus_tag="b1085" /gene_synonym="ECK1070" /gene_synonym="JW5154" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74169.2" /db_xref="GI:87081829" /db_xref="ASAP:ABE-0003672" /db_xref="UniProtKB/Swiss-Prot:P62066" /db_xref="EcoGene:EG14413" /translation="MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKD QYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFF TSCW" gene 1029665..1030624 /gene="rluC" /locus_tag="b1086" /gene_synonym="ECK1071" /gene_synonym="JW1072" /gene_synonym="yceC" /db_xref="EcoGene:EG11118" CDS 1029665..1030624 /gene="rluC" /locus_tag="b1086" /gene_synonym="ECK1071" /gene_synonym="JW1072" /gene_synonym="yceC" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine(955,2504,2580) synthase" /protein_id="AAC74170.1" /db_xref="GI:1787327" /db_xref="ASAP:ABE-0003675" /db_xref="UniProtKB/Swiss-Prot:P0AA39" /db_xref="EcoGene:EG11118" /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL RSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR" repeat_region 1030653..1030727 /note="REP101 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1030736..1031320) /gene="yceF" /locus_tag="b1087" /gene_synonym="ECK1072" /gene_synonym="JW5155" /db_xref="EcoGene:EG11438" CDS complement(1030736..1031320) /gene="yceF" /locus_tag="b1087" /gene_synonym="ECK1072" /gene_synonym="JW5155" /codon_start=1 /transl_table=11 /product="m(7)GTP pyrophosphatase" /protein_id="AAC74171.2" /db_xref="GI:87081830" /db_xref="ASAP:ABE-0003678" /db_xref="UniProtKB/Swiss-Prot:P0A729" /db_xref="EcoGene:EG11438" /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF YTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITL FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG" gene 1031314..1031482 /gene="psrD" /locus_tag="b4418" /gene_synonym="ECK1073" /gene_synonym="JWR0228" /gene_synonym="pke20" /gene_synonym="psrA4" /gene_synonym="sraB" /db_xref="EcoGene:EG31138" ncRNA 1031314..1031482 /ncRNA_class="other" /gene="psrD" /locus_tag="b4418" /gene_synonym="ECK1073" /gene_synonym="JWR0228" /gene_synonym="pke20" /gene_synonym="psrA4" /gene_synonym="sraB" /product="novel Novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047242" /db_xref="EcoGene:EG31138" gene 1031519..1032040 /gene="yceD" /locus_tag="b1088" /gene_synonym="ECK1074" /gene_synonym="JW1074" /db_xref="EcoGene:EG11119" CDS 1031519..1032040 /gene="yceD" /locus_tag="b1088" /gene_synonym="ECK1074" /gene_synonym="JW1074" /codon_start=1 /transl_table=11 /product="DUF177 family protein" /protein_id="AAC74172.1" /db_xref="GI:1787329" /db_xref="ASAP:ABE-0003684" /db_xref="UniProtKB/Swiss-Prot:P0AB28" /db_xref="EcoGene:EG11119" /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQK PNPFAVLASLKRK" gene 1032092..1032265 /gene="rpmF" /locus_tag="b1089" /gene_synonym="ECK1075" /gene_synonym="JW1075" /db_xref="EcoGene:EG10890" CDS 1032092..1032265 /gene="rpmF" /locus_tag="b1089" /gene_synonym="ECK1075" /gene_synonym="JW1075" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L32" /protein_id="AAC74173.1" /db_xref="GI:1787330" /db_xref="ASAP:ABE-0003686" /db_xref="UniProtKB/Swiss-Prot:P0A7N4" /db_xref="EcoGene:EG10890" /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT ADGYYRGRKVIAK" gene 1032346..1033416 /gene="plsX" /locus_tag="b1090" /gene_synonym="ECK1076" /gene_synonym="JW5156" /db_xref="EcoGene:EG11437" CDS 1032346..1033416 /gene="plsX" /locus_tag="b1090" /gene_synonym="ECK1076" /gene_synonym="JW5156" /function="phenotype; Macromolecule synthesis, modification: Phospholipids" /note="glycerolphosphate auxotrophy in plsB background; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative phosphate acyltransferase" /protein_id="AAC74174.2" /db_xref="GI:87081831" /db_xref="ASAP:ABE-0003692" /db_xref="UniProtKB/Swiss-Prot:P27247" /db_xref="EcoGene:EG11437" /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDA ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQAC VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA RLESVYPAGFELLDGGKSGTLR" gene 1033484..1034437 /gene="fabH" /locus_tag="b1091" /gene_synonym="ECK1077" /gene_synonym="JW1077" /db_xref="EcoGene:EG10277" CDS 1033484..1034437 /gene="fabH" /locus_tag="b1091" /gene_synonym="ECK1077" /gene_synonym="JW1077" /EC_number="2.3.1.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1551888" /note="3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase III" /protein_id="AAC74175.1" /db_xref="GI:1787333" /db_xref="ASAP:ABE-0003696" /db_xref="UniProtKB/Swiss-Prot:P0A6R0" /db_xref="EcoGene:EG10277" /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF" gene 1034453..1035382 /gene="fabD" /locus_tag="b1092" /gene_synonym="ECK1078" /gene_synonym="JW1078" /gene_synonym="tfpA" /db_xref="EcoGene:EG11317" CDS 1034453..1035382 /gene="fabD" /locus_tag="b1092" /gene_synonym="ECK1078" /gene_synonym="JW1078" /gene_synonym="tfpA" /EC_number="2.3.1.39" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="malonyl-CoA-[acyl-carrier-protein] transacylase" /protein_id="AAC74176.1" /db_xref="GI:1787334" /db_xref="ASAP:ABE-0003698" /db_xref="UniProtKB/Swiss-Prot:P0AAI9" /db_xref="EcoGene:EG11317" /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL" gene 1035395..1036129 /gene="fabG" /locus_tag="b1093" /gene_synonym="ECK1079" /gene_synonym="JW1079" /db_xref="EcoGene:EG11318" CDS 1035395..1036129 /gene="fabG" /locus_tag="b1093" /gene_synonym="ECK1079" /gene_synonym="JW1079" /EC_number="1.1.1.100" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] reductase" /protein_id="AAC74177.1" /db_xref="GI:1787335" /db_xref="ASAP:ABE-0003700" /db_xref="UniProtKB/Swiss-Prot:P0AEK2" /db_xref="EcoGene:EG11318" /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA VAFLASDEAAYITGETLHVNGGMYMV" gene 1036340..1036576 /gene="acpP" /locus_tag="b1094" /gene_synonym="ECK1080" /gene_synonym="JW1080" /db_xref="EcoGene:EG50003" CDS 1036340..1036576 /gene="acpP" /locus_tag="b1094" /gene_synonym="ECK1080" /gene_synonym="JW1080" /function="carrier; Fatty acid and phosphatidic acid biosynthesis" /note="acyl carrier protein; GO_process: GO:0042967 - acyl-carrier-protein biosynthetic process" /codon_start=1 /transl_table=11 /product="acyl carrier protein (ACP)" /protein_id="AAC74178.1" /db_xref="GI:1787336" /db_xref="ASAP:ABE-0003703" /db_xref="UniProtKB/Swiss-Prot:P0A6A8" /db_xref="EcoGene:EG50003" /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA" gene 1036664..1037905 /gene="fabF" /locus_tag="b1095" /gene_synonym="cvc" /gene_synonym="ECK1081" /gene_synonym="fabJ" /gene_synonym="JW1081" /gene_synonym="vtr" /db_xref="EcoGene:EG12606" CDS 1036664..1037905 /gene="fabF" /locus_tag="b1095" /gene_synonym="cvc" /gene_synonym="ECK1081" /gene_synonym="fabJ" /gene_synonym="JW1081" /gene_synonym="vtr" /EC_number="2.3.1.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase II" /protein_id="AAC74179.1" /db_xref="GI:1787337" /db_xref="ASAP:ABE-0003705" /db_xref="UniProtKB/Swiss-Prot:P0AAI5" /db_xref="EcoGene:EG12606" /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME YTLCNSFGFGGTNGSLIFKKI" gene 1038025..1038834 /gene="pabC" /locus_tag="b1096" /gene_synonym="ECK1082" /gene_synonym="JW1082" /db_xref="EcoGene:EG11493" CDS 1038025..1038834 /gene="pabC" /locus_tag="b1096" /gene_synonym="ECK1082" /gene_synonym="JW1082" /EC_number="4.1.3.38" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 1644759,2071583" /note="4-amino-4-deoxychorismate lyase; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex" /protein_id="AAC74180.1" /db_xref="GI:1787338" /db_xref="ASAP:ABE-0003709" /db_xref="UniProtKB/Swiss-Prot:P28305" /db_xref="EcoGene:EG11493" /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ RLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR ILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE VQASLEESLQADEMVICNALMPVMPVCACGDVSFSSATLYEYLAPLCERPN" gene 1038837..1039859 /gene="yceG" /locus_tag="b1097" /gene_synonym="ECK1083" /gene_synonym="JW1083" /db_xref="EcoGene:EG11494" CDS 1038837..1039859 /gene="yceG" /locus_tag="b1097" /gene_synonym="ECK1083" /gene_synonym="JW1083" /function="putative enzyme; Not classified" /note="putative thymidylate kinase" /codon_start=1 /transl_table=11 /product="septation protein, ampicillin sensitivity" /protein_id="AAC74181.1" /db_xref="GI:1787339" /db_xref="ASAP:ABE-0003712" /db_xref="UniProtKB/Swiss-Prot:P28306" /db_xref="EcoGene:EG11494" /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE TAVASERDKVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL KEKNAQ" gene 1039849..1040490 /gene="tmk" /locus_tag="b1098" /gene_synonym="ECK1084" /gene_synonym="JW1084" /gene_synonym="ycfG" /db_xref="EcoGene:EG12302" CDS 1039849..1040490 /gene="tmk" /locus_tag="b1098" /gene_synonym="ECK1084" /gene_synonym="JW1084" /gene_synonym="ycfG" /EC_number="2.7.4.9" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="AAC74182.1" /db_xref="GI:1787340" /db_xref="ASAP:ABE-0003714" /db_xref="UniProtKB/Swiss-Prot:P0A720" /db_xref="EcoGene:EG12302" /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA" gene 1040487..1041491 /gene="holB" /locus_tag="b1099" /gene_synonym="ECK1085" /gene_synonym="JW1085" /db_xref="EcoGene:EG11500" CDS 1040487..1041491 /gene="holB" /locus_tag="b1099" /gene_synonym="ECK1085" /gene_synonym="JW1085" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 8505303" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III, delta prime subunit" /protein_id="AAC74183.1" /db_xref="GI:1787341" /db_xref="ASAP:ABE-0003716" /db_xref="UniProtKB/Swiss-Prot:P28631" /db_xref="EcoGene:EG11500" /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNE HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL " gene 1041502..1042299 /gene="ycfH" /locus_tag="b1100" /gene_synonym="ECK1086" /gene_synonym="JW1086" /db_xref="EcoGene:EG12303" CDS 1041502..1042299 /gene="ycfH" /locus_tag="b1100" /gene_synonym="ECK1086" /gene_synonym="JW1086" /codon_start=1 /transl_table=11 /product="putative DNase" /protein_id="AAC74184.1" /db_xref="GI:1787342" /db_xref="ASAP:ABE-0003719" /db_xref="UniProtKB/Swiss-Prot:P0AFQ7" /db_xref="EcoGene:EG12303" /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR" gene 1042594..1044027 /gene="ptsG" /locus_tag="b1101" /gene_synonym="car" /gene_synonym="cat" /gene_synonym="CR" /gene_synonym="ECK1087" /gene_synonym="glcA" /gene_synonym="JW1087" /gene_synonym="tgl" /gene_synonym="umg" /gene_synonym="umgC" /db_xref="EcoGene:EG10787" CDS 1042594..1044027 /gene="ptsG" /locus_tag="b1101" /gene_synonym="car" /gene_synonym="cat" /gene_synonym="CR" /gene_synonym="ECK1087" /gene_synonym="glcA" /gene_synonym="JW1087" /gene_synonym="tgl" /gene_synonym="umg" /gene_synonym="umgC" /EC_number="2.7.1.69" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 3023349" /note="PTS system, glucose-specific IIBC component; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="fused glucose-specific PTS enzymes: IIB component/IIC component" /protein_id="AAC74185.1" /db_xref="GI:1787343" /db_xref="ASAP:ABE-0003722" /db_xref="UniProtKB/Swiss-Prot:P69786" /db_xref="EcoGene:EG10787" /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDG TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV AGSGVQAIFGTKSDNLKTEMDEYIRNH" gene complement(1044087..1046276) /gene="fhuE" /locus_tag="b1102" /gene_synonym="ECK1088" /gene_synonym="JW1088" /db_xref="EcoGene:EG10306" CDS complement(1044087..1046276) /gene="fhuE" /locus_tag="b1102" /gene_synonym="ECK1088" /gene_synonym="JW1088" /function="transport; Transport of small molecules: Cations" /note="outer membrane receptor for ferric iron uptake; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferric-rhodotorulic acid outer membrane transporter" /protein_id="AAC74186.1" /db_xref="GI:1787344" /db_xref="ASAP:ABE-0003724" /db_xref="UniProtKB/Swiss-Prot:P16869" /db_xref="EcoGene:EG10306" /translation="MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETV IVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM ENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQQFADTWQATLNATHSEVE FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQ STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF TRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGTPRNFSITGTYQF" gene 1046610..1046969 /gene="hinT" /locus_tag="b1103" /gene_synonym="ECK1089" /gene_synonym="JW1089" /gene_synonym="ycfF" /db_xref="EcoGene:EG12172" CDS 1046610..1046969 /gene="hinT" /locus_tag="b1103" /gene_synonym="ECK1089" /gene_synonym="JW1089" /gene_synonym="ycfF" /note="GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphoramidase, dadA activator protein" /protein_id="AAC74187.1" /db_xref="GI:1787346" /db_xref="ASAP:ABE-0003729" /db_xref="UniProtKB/Swiss-Prot:P0ACE7" /db_xref="EcoGene:EG12172" /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM HLLGGRPLGPMLAHKGL" gene 1046972..1047349 /gene="ycfL" /locus_tag="b1104" /gene_synonym="ECK1090" /gene_synonym="JW1090" /db_xref="EcoGene:EG13430" CDS 1046972..1047349 /gene="ycfL" /locus_tag="b1104" /gene_synonym="ECK1090" /gene_synonym="JW1090" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74188.1" /db_xref="GI:1787347" /db_xref="ASAP:ABE-0003731" /db_xref="UniProtKB/Swiss-Prot:P75946" /db_xref="EcoGene:EG13430" /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI SAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH SAVTLYGSANFLGAHKVRLYLYL" gene 1047363..1048004 /gene="lpoB" /locus_tag="b1105" /gene_synonym="ECK1091" /gene_synonym="JW5157" /gene_synonym="ycfM" /db_xref="EcoGene:EG13431" CDS 1047363..1048004 /gene="lpoB" /locus_tag="b1105" /gene_synonym="ECK1091" /gene_synonym="JW5157" /gene_synonym="ycfM" /codon_start=1 /transl_table=11 /product="OM lipoprotein stimulator of MrcB transpeptidase" /protein_id="AAC74189.1" /db_xref="GI:1787348" /db_xref="ASAP:ABE-0003733" /db_xref="UniProtKB/Swiss-Prot:P0AB38" /db_xref="EcoGene:EG13431" /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ PVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSV LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ" gene 1047985..1048809 /gene="thiK" /locus_tag="b1106" /gene_synonym="ECK1092" /gene_synonym="JW1092" /gene_synonym="ycfN" /db_xref="EcoGene:EG13432" CDS 1047985..1048809 /gene="thiK" /locus_tag="b1106" /gene_synonym="ECK1092" /gene_synonym="JW1092" /gene_synonym="ycfN" /EC_number="2.7.1.89" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamine" /note="putative beta-glucosidase" /codon_start=1 /transl_table=11 /product="thiamine kinase" /protein_id="AAC74190.1" /db_xref="GI:1787349" /db_xref="ASAP:ABE-0003735" /db_xref="UniProtKB/Swiss-Prot:P75948" /db_xref="EcoGene:EG13432" /translation="MPFRSNNPITRDELLSRFFPQYHPVTTFNSGLSGGSFLIEHQGQ RFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVKTYLPD TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYA TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ" gene 1048820..1049845 /gene="nagZ" /locus_tag="b1107" /gene_synonym="ECK1093" /gene_synonym="JW1093" /gene_synonym="ycfO" /db_xref="EcoGene:EG13433" CDS 1048820..1049845 /gene="nagZ" /locus_tag="b1107" /gene_synonym="ECK1093" /gene_synonym="JW1093" /gene_synonym="ycfO" /EC_number="3.2.1.52" /note="GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="beta N-acetyl-glucosaminidase" /protein_id="AAC74191.1" /db_xref="GI:1787350" /db_xref="ASAP:ABE-0003737" /db_xref="UniProtKB/Swiss-Prot:P75949" /db_xref="EcoGene:EG13433" /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE LVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGW LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKT TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSD VDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERW QEEKAGH" gene 1049868..1050410 /gene="ycfP" /locus_tag="b1108" /gene_synonym="ECK1094" /gene_synonym="JW5158" /db_xref="EcoGene:EG13434" CDS 1049868..1050410 /gene="ycfP" /locus_tag="b1108" /gene_synonym="ECK1094" /gene_synonym="JW5158" /codon_start=1 /transl_table=11 /product="putative UPF0227 family esterase" /protein_id="AAC74192.2" /db_xref="GI:87081832" /db_xref="ASAP:ABE-0003740" /db_xref="UniProtKB/Swiss-Prot:P0A8E1" /db_xref="EcoGene:EG13434" /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT HKFKNISPHLQRIKAFKTLG" repeat_region 1050464..1050538 /note="REP102 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 1050810..1052114 /gene="ndh" /locus_tag="b1109" /gene_synonym="ECK1095" /gene_synonym="JW1095" /db_xref="EcoGene:EG10649" CDS 1050810..1052114 /gene="ndh" /locus_tag="b1109" /gene_synonym="ECK1095" /gene_synonym="JW1095" /EC_number="1.16.1.-" /EC_number="1.6.99.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="respiratory NADH dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="respiratory NADH dehydrogenase 2/cupric reductase" /protein_id="AAC74193.1" /db_xref="GI:1787352" /db_xref="ASAP:ABE-0003746" /db_xref="UniProtKB/Swiss-Prot:P00393" /db_xref="EcoGene:EG10649" /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE RILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAA HQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH" repeat_region 1052127..1052156 /note="REP103 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1052324..1052863 /gene="ycfJ" /locus_tag="b1110" /gene_synonym="ECK1096" /gene_synonym="JW1096" /db_xref="EcoGene:EG12444" CDS 1052324..1052863 /gene="ycfJ" /locus_tag="b1110" /gene_synonym="ECK1096" /gene_synonym="JW1096" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74194.1" /db_xref="GI:1787353" /db_xref="ASAP:ABE-0003752" /db_xref="UniProtKB/Swiss-Prot:P0AB35" /db_xref="EcoGene:EG12444" /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD PGTQIPLDSNGQLILNNKV" gene complement(1052925..1053557) /gene="ycfQ" /locus_tag="b1111" /gene_synonym="ECK1097" /gene_synonym="JW5159" /db_xref="EcoGene:EG13435" CDS complement(1052925..1053557) /gene="ycfQ" /locus_tag="b1111" /gene_synonym="ECK1097" /gene_synonym="JW5159" /function="regulator; Not classified" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="repressor for bhsA(ycfR)" /protein_id="AAC74195.2" /db_xref="GI:87081833" /db_xref="ASAP:ABE-0003754" /db_xref="UniProtKB/Swiss-Prot:P75952" /db_xref="EcoGene:EG13435" /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE IPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK" gene 1053798..1054055 /gene="bhsA" /locus_tag="b1112" /gene_synonym="ECK1098" /gene_synonym="JW1098" /gene_synonym="ycfR" /db_xref="EcoGene:EG13436" CDS 1053798..1054055 /gene="bhsA" /locus_tag="b1112" /gene_synonym="ECK1098" /gene_synonym="JW1098" /gene_synonym="ycfR" /codon_start=1 /transl_table=11 /product="biofilm, cell surface and signaling protein" /protein_id="AAC74196.1" /db_xref="GI:1787355" /db_xref="ASAP:ABE-0003758" /db_xref="UniProtKB/Swiss-Prot:P0AB40" /db_xref="EcoGene:EG13436" /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAG TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK" gene complement(1054137..1055099) /gene="ldtC" /locus_tag="b1113" /gene_synonym="ECK1099" /gene_synonym="JW5820" /gene_synonym="ycfS" /db_xref="EcoGene:EG13437" CDS complement(1054137..1055099) /gene="ldtC" /locus_tag="b1113" /gene_synonym="ECK1099" /gene_synonym="JW5820" /gene_synonym="ycfS" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase linking Lpp to murein" /protein_id="AAC74197.1" /db_xref="GI:1787356" /db_xref="ASAP:ABE-0003760" /db_xref="UniProtKB/Swiss-Prot:P75954" /db_xref="EcoGene:EG13437" /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN IRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL" gene complement(1055243..1058689) /gene="mfd" /locus_tag="b1114" /gene_synonym="ECK1100" /gene_synonym="JW1100" /db_xref="EcoGene:EG11619" CDS complement(1055243..1058689) /gene="mfd" /locus_tag="b1114" /gene_synonym="ECK1100" /gene_synonym="JW1100" /function="factor; DNA - replication, repair, restriction/modification" /note="transcription-repair coupling factor; mutation frequency decline; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="AAC74198.1" /db_xref="GI:1787357" /db_xref="ASAP:ABE-0003763" /db_xref="UniProtKB/Swiss-Prot:P30958" /db_xref="EcoGene:EG11619" /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW PRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVV REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI ASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIE FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA IA" gene complement(1058817..1059890) /gene="ycfT" /locus_tag="b1115" /gene_synonym="ECK1101" /gene_synonym="JW1101" /db_xref="EcoGene:EG13438" CDS complement(1058817..1059890) /gene="ycfT" /locus_tag="b1115" /gene_synonym="ECK1101" /gene_synonym="JW1101" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC74199.1" /db_xref="GI:1787359" /db_xref="ASAP:ABE-0003767" /db_xref="UniProtKB/Swiss-Prot:P75955" /db_xref="EcoGene:EG13438" /translation="MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLS KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL SQRAFSDLLFSPPSLPAAVSYSR" gene 1060152..1061351 /gene="lolC" /locus_tag="b1116" /gene_synonym="ECK1102" /gene_synonym="JW5161" /gene_synonym="ycfU" /db_xref="EcoGene:EG13439" CDS 1060152..1061351 /gene="lolC" /locus_tag="b1116" /gene_synonym="ECK1102" /gene_synonym="JW5161" /gene_synonym="ycfU" /experiment="N-terminus verified by Edman degradation: PMID 10783239" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system transmembrane protein" /protein_id="AAC74200.1" /db_xref="GI:1787360" /db_xref="ASAP:ABE-0003772" /db_xref="UniProtKB/Swiss-Prot:P0ADC3" /db_xref="EcoGene:EG13439" /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD QIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGN ITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGA LLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP AEALRYE" gene 1061344..1062045 /gene="lolD" /locus_tag="b1117" /gene_synonym="ECK1103" /gene_synonym="JW5162" /gene_synonym="ycfV" /db_xref="EcoGene:EG13440" CDS 1061344..1062045 /gene="lolD" /locus_tag="b1117" /gene_synonym="ECK1103" /gene_synonym="JW5162" /gene_synonym="ycfV" /function="putative transport; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 10783239" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="outer membrane-specific lipoprotein transporter subunit" /protein_id="AAC74201.2" /db_xref="GI:87081834" /db_xref="ASAP:ABE-0003774" /db_xref="UniProtKB/Swiss-Prot:P75957" /db_xref="EcoGene:EG13440" /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF TALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM RDGRLTAELSLMGAE" gene 1062045..1063289 /gene="lolE" /locus_tag="b1118" /gene_synonym="ECK1104" /gene_synonym="JW1104" /gene_synonym="ycfW" /db_xref="EcoGene:EG13441" CDS 1062045..1063289 /gene="lolE" /locus_tag="b1118" /gene_synonym="ECK1104" /gene_synonym="JW1104" /gene_synonym="ycfW" /function="putative enzyme; Not classified" /note="putative kinase; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="lipoprotein-releasing system transmembrane protein" /protein_id="AAC74202.1" /db_xref="GI:1787362" /db_xref="ASAP:ABE-0003776" /db_xref="UniProtKB/Swiss-Prot:P75958" /db_xref="EcoGene:EG13441" /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG LSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTG LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG SSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL LASWYPARRASNIDPARVLSGQ" gene 1063318..1064229 /gene="nagK" /locus_tag="b1119" /gene_synonym="ECK1105" /gene_synonym="JW1105" /gene_synonym="ycfX" /db_xref="EcoGene:EG13442" CDS 1063318..1064229 /gene="nagK" /locus_tag="b1119" /gene_synonym="ECK1105" /gene_synonym="JW1105" /gene_synonym="ycfX" /EC_number="2.7.1.59" /experiment="N-terminus verified by Edman degradation: PMID 15489439" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="N-acetyl-D-glucosamine kinase" /protein_id="AAC74203.1" /db_xref="GI:1787363" /db_xref="ASAP:ABE-0003778" /db_xref="UniProtKB/Swiss-Prot:P75959" /db_xref="EcoGene:EG13442" /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC ELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQG DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV ARVPRIERARHGDAGGMRGAAFLHLTD" gene 1064356..1065084 /gene="cobB" /locus_tag="b1120" /gene_synonym="ECK1106" /gene_synonym="JW1106" /gene_synonym="npdA" /gene_synonym="ycfY" /db_xref="EcoGene:EG13443" CDS 1064356..1065084 /gene="cobB" /locus_tag="b1120" /gene_synonym="ECK1106" /gene_synonym="JW1106" /gene_synonym="npdA" /gene_synonym="ycfY" /note="putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="deacetylase of acs and cheY, chemotaxis regulator" /protein_id="AAC74204.2" /db_xref="GI:308199517" /db_xref="ASAP:ABE-0003781" /db_xref="UniProtKB/Swiss-Prot:P75960" /db_xref="EcoGene:EG13443" /translation="MEKPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGF DRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAG NTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGM DEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYY GPASQVVPEFVEKLLKGLKAGSIA" repeat_region 1065079..1065174 /note="RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1065204..1065992) /gene="ycfZ" /locus_tag="b1121" /gene_synonym="ECK1107" /gene_synonym="JW1107" /db_xref="EcoGene:EG13444" CDS complement(1065204..1065992) /gene="ycfZ" /locus_tag="b1121" /gene_synonym="ECK1107" /gene_synonym="JW1107" /function="putative factor; Not classified" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC74205.1" /db_xref="GI:1787365" /db_xref="ASAP:ABE-0003784" /db_xref="UniProtKB/Swiss-Prot:P75961" /db_xref="EcoGene:EG13444" /translation="MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEI AHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTR EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQST PPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTI ANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR" gene complement(1065989..1066450) /gene="ymfA" /locus_tag="b1122" /gene_synonym="ECK1108" /gene_synonym="JW5164" /db_xref="EcoGene:EG13445" CDS complement(1065989..1066450) /gene="ymfA" /locus_tag="b1122" /gene_synonym="ECK1108" /gene_synonym="JW5164" /codon_start=1 /transl_table=11 /product="DUF3592 family inner membrane protein" /protein_id="AAC74206.2" /db_xref="GI:87081835" /db_xref="ASAP:ABE-0003786" /db_xref="UniProtKB/Swiss-Prot:P75962" /db_xref="EcoGene:EG13445" /translation="MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVI VDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSP GHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP" gene complement(1066508..1067554) /gene="potD" /locus_tag="b1123" /gene_synonym="ECK1109" /gene_synonym="JW1109" /db_xref="EcoGene:EG10752" CDS complement(1066508..1067554) /gene="potD" /locus_tag="b1123" /gene_synonym="ECK1109" /gene_synonym="JW1109" /function="transport; Transport of small molecules: Amino acids, amines" /note="spermidine/putrescine periplasmic transport protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter periplasmic binding protein" /protein_id="AAC74207.1" /db_xref="GI:1787367" /db_xref="ASAP:ABE-0003789" /db_xref="UniProtKB/Swiss-Prot:P0AFK9" /db_xref="EcoGene:EG10752" /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS SIYEEYYQKLKAGR" gene complement(1067551..1068345) /gene="potC" /locus_tag="b1124" /gene_synonym="ECK1110" /gene_synonym="JW1110" /db_xref="EcoGene:EG10751" CDS complement(1067551..1068345) /gene="potC" /locus_tag="b1124" /gene_synonym="ECK1110" /gene_synonym="JW1110" /function="transport; Transport of small molecules: Amino acids, amines" /note="spermidine/putrescine transport system permease; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter permease" /protein_id="AAC74208.1" /db_xref="GI:1787368" /db_xref="ASAP:ABE-0003791" /db_xref="UniProtKB/Swiss-Prot:P0AFK6" /db_xref="EcoGene:EG10751" /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK" gene complement(1068342..1069169) /gene="potB" /locus_tag="b1125" /gene_synonym="ECK1111" /gene_synonym="JW1111" /db_xref="EcoGene:EG10750" CDS complement(1068342..1069169) /gene="potB" /locus_tag="b1125" /gene_synonym="ECK1111" /gene_synonym="JW1111" /function="transport; Transport of small molecules: Amino acids, amines" /note="spermidine/putrescine transport system permease; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter permease" /protein_id="AAC74209.1" /db_xref="GI:1787369" /db_xref="ASAP:ABE-0003794" /db_xref="UniProtKB/Swiss-Prot:P0AFK4" /db_xref="EcoGene:EG10750" /translation="MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYT RLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTN SLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLY SSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLM GGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE" gene complement(1069183..1070319) /gene="potA" /locus_tag="b1126" /gene_synonym="ECK1112" /gene_synonym="JW1112" /db_xref="EcoGene:EG10749" CDS complement(1069183..1070319) /gene="potA" /locus_tag="b1126" /gene_synonym="ECK1112" /gene_synonym="JW1112" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of spermidine/putrescine transport; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter ATPase" /protein_id="AAC74210.1" /db_xref="GI:1787370" /db_xref="ASAP:ABE-0003796" /db_xref="UniProtKB/Swiss-Prot:P69874" /db_xref="EcoGene:EG10749" /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI VVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK" gene 1070569..1071795 /gene="pepT" /locus_tag="b1127" /gene_synonym="ECK1113" /gene_synonym="JW1113" /db_xref="EcoGene:EG11549" CDS 1070569..1071795 /gene="pepT" /locus_tag="b1127" /gene_synonym="ECK1113" /gene_synonym="JW1113" /function="enzyme; Degradation of proteins, peptides, glyco" /note="putative peptidase T" /codon_start=1 /transl_table=11 /product="peptidase T" /protein_id="AAC74211.1" /db_xref="GI:1787372" /db_xref="ASAP:ABE-0003800" /db_xref="UniProtKB/Swiss-Prot:P29745" /db_xref="EcoGene:EG11549" /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKI PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMH YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK AVQVIVRIAELTAQRK" repeat_region 1071808..1071831 /note="REP105 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1071844..1072965) /gene="roxA" /locus_tag="b1128" /gene_synonym="ECK1114" /gene_synonym="JW1114" /gene_synonym="ycfD" /db_xref="EcoGene:EG11430" CDS complement(1071844..1072965) /gene="roxA" /locus_tag="b1128" /gene_synonym="ECK1114" /gene_synonym="JW1114" /gene_synonym="ycfD" /EC_number="1.14.11.-" /function="enzyme; Proteins - translation and modification" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase" /protein_id="AAC74212.2" /db_xref="GI:87081836" /db_xref="ASAP:ABE-0003802" /db_xref="UniProtKB/Swiss-Prot:P27431" /db_xref="EcoGene:EG11430" /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR HELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG" gene complement(1073041..1074501) /gene="phoQ" /locus_tag="b1129" /gene_synonym="ECK1115" /gene_synonym="JW1115" /db_xref="EcoGene:EG10732" CDS complement(1073041..1074501) /gene="phoQ" /locus_tag="b1129" /gene_synonym="ECK1115" /gene_synonym="JW1115" /function="enzyme; Global regulatory functions" /note="sensor protein PhoQ; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with PhoP" /protein_id="AAC74213.1" /db_xref="GI:1787374" /db_xref="ASAP:ABE-0003805" /db_xref="UniProtKB/Swiss-Prot:P23837" /db_xref="EcoGene:EG10732" /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE" gene complement(1074501..1075172) /gene="phoP" /locus_tag="b1130" /gene_synonym="ECK1116" /gene_synonym="JW1116" /db_xref="EcoGene:EG10731" CDS complement(1074501..1075172) /gene="phoP" /locus_tag="b1130" /gene_synonym="ECK1116" /gene_synonym="JW1116" /function="regulator; Global regulatory functions" /note="transcriptional regulatory protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with PhoQ" /protein_id="AAC74214.1" /db_xref="GI:1787375" /db_xref="ASAP:ABE-0003807" /db_xref="UniProtKB/Swiss-Prot:P23836" /db_xref="EcoGene:EG10731" /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHI PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY LFELR" repeat_region 1075305..1075327 /note="REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1075341..1076711) /gene="purB" /locus_tag="b1131" /gene_synonym="ade" /gene_synonym="ECK1117" /gene_synonym="JW1117" /db_xref="EcoGene:EG11314" CDS complement(1075341..1076711) /gene="purB" /locus_tag="b1131" /gene_synonym="ade" /gene_synonym="ECK1117" /gene_synonym="JW1117" /EC_number="4.3.2.2" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1729205" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="AAC74215.1" /db_xref="GI:1787376" /db_xref="ASAP:ABE-0003810" /db_xref="UniProtKB/Swiss-Prot:P0AB89" /db_xref="EcoGene:EG11314" /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL QKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKE KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT MVDELK" gene complement(1076715..1077356) /gene="hflD" /locus_tag="b1132" /gene_synonym="ECK1118" /gene_synonym="hslZ" /gene_synonym="JW5165" /gene_synonym="ycfC" /db_xref="EcoGene:EG11345" CDS complement(1076715..1077356) /gene="hflD" /locus_tag="b1132" /gene_synonym="ECK1118" /gene_synonym="hslZ" /gene_synonym="JW5165" /gene_synonym="ycfC" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative lysogenization regulator" /protein_id="AAC74216.1" /db_xref="GI:1787377" /db_xref="ASAP:ABE-0003812" /db_xref="UniProtKB/Swiss-Prot:P25746" /db_xref="EcoGene:EG11345" /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS PQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL" gene complement(1077392..1078498) /gene="mnmA" /locus_tag="b1133" /gene_synonym="asuE" /gene_synonym="ECK1119" /gene_synonym="JW1119" /gene_synonym="trmU" /gene_synonym="ycfB" /db_xref="EcoGene:EG11344" CDS complement(1077392..1078498) /gene="mnmA" /locus_tag="b1133" /gene_synonym="asuE" /gene_synonym="ECK1119" /gene_synonym="JW1119" /gene_synonym="trmU" /gene_synonym="ycfB" /EC_number="2.1.1.61" /function="enzyme; tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA(Gln,Lys,Glu) U34 2-thiouridylase" /protein_id="AAC74217.2" /db_xref="GI:87081837" /db_xref="ASAP:ABE-0003815" /db_xref="UniProtKB/Swiss-Prot:P25745" /db_xref="EcoGene:EG11344" /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV" gene complement(1078552..1079013) /gene="nudJ" /locus_tag="b1134" /gene_synonym="ECK1120" /gene_synonym="JW1120" /gene_synonym="ymfB" /db_xref="EcoGene:EG13446" CDS complement(1078552..1079013) /gene="nudJ" /locus_tag="b1134" /gene_synonym="ECK1120" /gene_synonym="JW1120" /gene_synonym="ymfB" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase" /protein_id="AAC74218.1" /db_xref="GI:1787379" /db_xref="ASAP:ABE-0003818" /db_xref="UniProtKB/Swiss-Prot:P0AEI6" /db_xref="EcoGene:EG13446" /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID CCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI" gene complement(1079023..1079676) /gene="rluE" /locus_tag="b1135" /gene_synonym="ECK1121" /gene_synonym="JW1121" /gene_synonym="ymfC" /db_xref="EcoGene:EG13447" CDS complement(1079023..1079676) /gene="rluE" /locus_tag="b1135" /gene_synonym="ECK1121" /gene_synonym="JW1121" /gene_synonym="ymfC" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine(2457) synthase" /protein_id="AAC74219.2" /db_xref="GI:87081838" /db_xref="ASAP:ABE-0003820" /db_xref="UniProtKB/Swiss-Prot:P75966" /db_xref="EcoGene:EG13447" /translation="MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILF NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD" gene 1079848..1081098 /gene="icd" /locus_tag="b1136" /gene_synonym="ECK1122" /gene_synonym="icdA" /gene_synonym="icdE" /gene_synonym="JW1122" /db_xref="EcoGene:EG10489" CDS 1079848..1081098 /gene="icd" /locus_tag="b1136" /gene_synonym="ECK1122" /gene_synonym="icdA" /gene_synonym="icdE" /gene_synonym="JW1122" /EC_number="1.1.1.42" /function="enzyme; Energy metabolism, carbon: TCA cycle; Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="isocitrate dehydrogenase, specific for NADP+; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase" /protein_id="AAC74220.1" /db_xref="GI:1787381" /db_xref="ASAP:ABE-0003823" /db_xref="UniProtKB/Swiss-Prot:P08200" /db_xref="EcoGene:EG10489" /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD FERLMDGAKLLKCSEFGDAIIENM" gene 1080934..1081098 /gene="icdC" /locus_tag="b4519" /gene_synonym="ECK1146" /gene_synonym="icd" /gene_synonym="JW5173" /pseudo /db_xref="EcoGene:EG10009" CDS 1080934..1081098 /gene="icdC" /locus_tag="b4519" /gene_synonym="ECK1146" /gene_synonym="icd" /gene_synonym="JW5173" /note="pseudogene, isocitrate dehydrogenase C-terminal gene fragment; idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion; GO_component: GO:0005737 - cytoplasm" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285040" /db_xref="EcoGene:EG10009" gene complement(1081201..1081524) /gene="iraM" /locus_tag="b1160" /gene_synonym="ECK1147" /gene_synonym="elb1" /gene_synonym="elbA" /gene_synonym="JW1147" /gene_synonym="ycgW" /db_xref="EcoGene:EG13885" CDS complement(1081201..1081524) /gene="iraM" /locus_tag="b1160" /gene_synonym="ECK1147" /gene_synonym="elb1" /gene_synonym="elbA" /gene_synonym="JW1147" /gene_synonym="ycgW" /codon_start=1 /transl_table=11 /product="RpoS stabilzer during Mg starvation, anti-RssB factor" /protein_id="AAC74244.1" /db_xref="GI:1787407" /db_xref="ASAP:ABE-0003893" /db_xref="UniProtKB/Swiss-Prot:P75987" /db_xref="EcoGene:EG13885" /translation="MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFT PVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKIC PYGLK" gene complement(1082224..1082628) /gene="ycgX" /locus_tag="b1161" /gene_synonym="ECK1148" /gene_synonym="JW1148" /db_xref="EcoGene:EG14244" CDS complement(1082224..1082628) /gene="ycgX" /locus_tag="b1161" /gene_synonym="ECK1148" /gene_synonym="JW1148" /codon_start=1 /transl_table=11 /product="DUF1398 family protein" /protein_id="AAC74245.1" /db_xref="GI:1787408" /db_xref="ASAP:ABE-0003897" /db_xref="UniProtKB/Swiss-Prot:P75988" /db_xref="EcoGene:EG14244" /translation="MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNI RIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFR WVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI" gene complement(1082849..1083580) /gene="bluR" /locus_tag="b1162" /gene_synonym="ECK1149" /gene_synonym="JW1149" /gene_synonym="ycgE" /db_xref="EcoGene:EG13886" CDS complement(1082849..1083580) /gene="bluR" /locus_tag="b1162" /gene_synonym="ECK1149" /gene_synonym="JW1149" /gene_synonym="ycgE" /function="putative regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="repressor of blue light-responsive genes" /protein_id="AAC74246.1" /db_xref="GI:1787409" /db_xref="ASAP:ABE-0003900" /db_xref="UniProtKB/Swiss-Prot:P75989" /db_xref="EcoGene:EG13886" /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRK PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM APTRRQNELLQHWGEQGYKVIFHAP" gene complement(1083785..1084996) /gene="bluF" /locus_tag="b1163" /gene_synonym="ECK1150" /gene_synonym="JW1150" /gene_synonym="ycgF" /db_xref="EcoGene:EG13887" CDS complement(1083785..1084996) /gene="bluF" /locus_tag="b1163" /gene_synonym="ECK1150" /gene_synonym="JW1150" /gene_synonym="ycgF" /codon_start=1 /transl_table=11 /product="anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein" /protein_id="AAC74247.1" /db_xref="GI:1787410" /db_xref="ASAP:ABE-0003903" /db_xref="UniProtKB/Swiss-Prot:P75990" /db_xref="EcoGene:EG13887" /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER DDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTAD LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN GIPSIAWPEKK" gene 1085310..1085546 /gene="ycgZ" /locus_tag="b1164" /gene_synonym="ECK1151" /gene_synonym="JW1151" /db_xref="EcoGene:EG14288" CDS 1085310..1085546 /gene="ycgZ" /locus_tag="b1164" /gene_synonym="ECK1151" /gene_synonym="JW1151" /codon_start=1 /transl_table=11 /product="RcsB connector protein for regulation of biofilm and acid-resistance" /protein_id="AAC74248.1" /db_xref="GI:1787411" /db_xref="ASAP:ABE-0003907" /db_xref="UniProtKB/Swiss-Prot:P75991" /db_xref="EcoGene:EG14288" /translation="MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNL SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE" gene 1085589..1085861 /gene="ymgA" /locus_tag="b1165" /gene_synonym="ECK1152" /gene_synonym="JW1152" /db_xref="EcoGene:EG14289" CDS 1085589..1085861 /gene="ymgA" /locus_tag="b1165" /gene_synonym="ECK1152" /gene_synonym="JW1152" /codon_start=1 /transl_table=11 /product="RcsB connector protein for regulation of biofilm" /protein_id="AAC74249.1" /db_xref="GI:1787412" /db_xref="ASAP:ABE-0003909" /db_xref="UniProtKB/Swiss-Prot:P75992" /db_xref="EcoGene:EG14289" /translation="MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAE EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH" gene 1085890..1086156 /gene="ariR" /locus_tag="b1166" /gene_synonym="ECK1153" /gene_synonym="JW1153" /gene_synonym="ymgB" /db_xref="EcoGene:EG14290" CDS 1085890..1086156 /gene="ariR" /locus_tag="b1166" /gene_synonym="ECK1153" /gene_synonym="JW1153" /gene_synonym="ymgB" /codon_start=1 /transl_table=11 /product="RcsB connector protein for regulation of biofilm and acid-resistance" /protein_id="AAC74250.1" /db_xref="GI:1787413" /db_xref="ASAP:ABE-0003911" /db_xref="UniProtKB/Swiss-Prot:P75993" /db_xref="EcoGene:EG14290" /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLS GDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM" gene 1086269..1086517 /gene="ymgC" /locus_tag="b1167" /gene_synonym="ECK1154" /gene_synonym="JW1154" /db_xref="EcoGene:EG14291" CDS 1086269..1086517 /gene="ymgC" /locus_tag="b1167" /gene_synonym="ECK1154" /gene_synonym="JW1154" /codon_start=1 /transl_table=11 /product="Blue light, low temperature and stress induced protein" /protein_id="AAC74251.1" /db_xref="GI:1787414" /db_xref="ASAP:ABE-0003915" /db_xref="UniProtKB/Swiss-Prot:P75994" /db_xref="EcoGene:EG14291" /translation="MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLK DETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS" gene 1086849..1088372 /gene="ycgG" /locus_tag="b1168" /gene_synonym="ECK1155" /gene_synonym="JW5174" /db_xref="EcoGene:EG13888" CDS 1086849..1088372 /gene="ycgG" /locus_tag="b1168" /gene_synonym="ECK1155" /gene_synonym="JW5174" /function="putative enzyme; Not classified" /note="putative proteases" /codon_start=1 /transl_table=11 /product="putative membrane-anchored cyclic-di-GMP phosphodiesterase" /protein_id="AAC74252.2" /db_xref="GI:87081845" /db_xref="ASAP:ABE-0003918" /db_xref="UniProtKB/Swiss-Prot:P75995" /db_xref="EcoGene:EG13888" /translation="MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANN INHILEEASQATQTAVNIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLP GNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNV PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLI DKGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGT LRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEG FHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNIL HENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLAR KLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE" gene 1088504..1088722 /gene="ymgF" /locus_tag="b4520" /gene_synonym="ECK1156" /gene_synonym="JW1156" /db_xref="EcoGene:EG14341" CDS 1088504..1088722 /gene="ymgF" /locus_tag="b4520" /gene_synonym="ECK1156" /gene_synonym="JW1156" /note="GO_component: GO:0016021 - integral to membrane" /codon_start=1 /transl_table=11 /product="inner membrane division septum protein" /protein_id="ABD18651.1" /db_xref="GI:87081846" /db_xref="ASAP:ABE-0285041" /db_xref="UniProtKB/Swiss-Prot:P58034" /db_xref="EcoGene:EG14341" /translation="MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTI NLLNALVWLAINLVNRLRERLVNHRDQQ" gene 1089122..1091769 /gene="ycgH" /locus_tag="b4491" /gene_synonym="ECK1157" /gene_synonym="JW5176" /gene_synonym="JW5901" /pseudo /db_xref="EcoGene:EG13889" CDS join(1089122..1091695,1091695..1091769) /gene="ycgH" /locus_tag="b4491" /gene_synonym="ECK1157" /gene_synonym="JW5176" /gene_synonym="JW5901" /note="pseudogene; putative ATP-binding component of a transport system" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003921" /db_xref="ASAP:ABE-0003924" /db_xref="ASAP:ABE-0285092" /db_xref="EcoGene:EG13889" gene complement(1091826..1092155) /gene="ymgD" /locus_tag="b1171" /gene_synonym="ECK1158" /gene_synonym="JW5177" /db_xref="EcoGene:EG14292" CDS complement(1091826..1092155) /gene="ymgD" /locus_tag="b1171" /gene_synonym="ECK1158" /gene_synonym="JW5177" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74255.2" /db_xref="GI:87081849" /db_xref="ASAP:ABE-0003926" /db_xref="UniProtKB/Swiss-Prot:P0AB46" /db_xref="EcoGene:EG14292" /translation="MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAK TDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDT MRAIGKK" gene complement(1092165..1092509) /gene="ymgG" /locus_tag="b1172" /gene_synonym="ECK4470" /db_xref="EcoGene:EG14415" CDS complement(1092165..1092509) /gene="ymgG" /locus_tag="b1172" /gene_synonym="ECK4470" /codon_start=1 /transl_table=11 /product="UPF0757 family protein" /protein_id="AAC74256.5" /db_xref="GI:288549313" /db_xref="ASAP:ABE-0003928" /db_xref="UniProtKB/Swiss-Prot:Q7DFV3" /db_xref="EcoGene:EG14415" /translation="MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNG VNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVI GGTGGAILGKMK" gene complement(1092511..1092684) /gene="ymgI" /locus_tag="b4593" /gene_synonym="ECK4403" /db_xref="EcoGene:EG14449" CDS complement(1092511..1092684) /gene="ymgI" /locus_tag="b4593" /gene_synonym="ECK4403" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABP93440.1" /db_xref="GI:145693115" /db_xref="UniProtKB/Swiss-Prot:A5A611" /db_xref="EcoGene:EG14449" /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED EIIVCATYLIPDI" gene 1092785..1092970 /gene="ymgJ" /locus_tag="b4594" /gene_synonym="ECK4404" /db_xref="EcoGene:EG14450" CDS 1092785..1092970 /gene="ymgJ" /locus_tag="b4594" /gene_synonym="ECK4404" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABP93441.1" /db_xref="GI:145693116" /db_xref="UniProtKB/Swiss-Prot:A5A612" /db_xref="EcoGene:EG14450" /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYQKRVIFYPTTLQR TACKKCLFLMRDIIISS" gene 1093085..1093428 /gene="ycgI" /locus_tag="b4521" /gene_synonym="ECK1161" /gene_synonym="JW1162" /gene_synonym="ymgH" /pseudo /db_xref="EcoGene:EG13890" CDS join(1093085..1093192,1093192..1093428) /gene="ycgI" /locus_tag="b4521" /gene_synonym="ECK1161" /gene_synonym="JW1162" /gene_synonym="ymgH" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0003933" /db_xref="ASAP:ABE-0285042" /db_xref="UniProtKB/Swiss-Prot:P76000" /db_xref="EcoGene:EG13890" gene complement(1093800..1094066) /gene="minE" /locus_tag="b1174" /gene_synonym="ECK1162" /gene_synonym="JW1163" /gene_synonym="minB" /db_xref="EcoGene:EG10598" CDS complement(1093800..1094066) /gene="minE" /locus_tag="b1174" /gene_synonym="ECK1162" /gene_synonym="JW1163" /gene_synonym="minB" /function="factor; Cell division" /note="cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="cell division topological specificity factor" /protein_id="AAC74258.1" /db_xref="GI:1787422" /db_xref="ASAP:ABE-0003935" /db_xref="UniProtKB/Swiss-Prot:P0A734" /db_xref="EcoGene:EG10598" /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK" gene complement(1094070..1094882) /gene="minD" /locus_tag="b1175" /gene_synonym="ECK1163" /gene_synonym="JW1164" /gene_synonym="minB" /db_xref="EcoGene:EG10597" CDS complement(1094070..1094882) /gene="minD" /locus_tag="b1175" /gene_synonym="ECK1163" /gene_synonym="JW1164" /gene_synonym="minB" /function="enzyme; Cell division" /note="cell division inhibitor, a membrane ATPase, activates minC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="inhibitor of FtsZ ring polymerization; chromosome-membrane tethering protein; membrane ATPase of the MinCDEE system" /protein_id="AAC74259.1" /db_xref="GI:1787423" /db_xref="ASAP:ABE-0003938" /db_xref="UniProtKB/Swiss-Prot:P0AEZ3" /db_xref="EcoGene:EG10597" /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG" gene complement(1094906..1095601) /gene="minC" /locus_tag="b1176" /gene_synonym="ECK1164" /gene_synonym="JW1165" /gene_synonym="minB" /db_xref="EcoGene:EG10596" CDS complement(1094906..1095601) /gene="minC" /locus_tag="b1176" /gene_synonym="ECK1164" /gene_synonym="JW1165" /gene_synonym="minB" /function="factor; Cell division" /note="cell division inhibitor, inhibits ftsZ ring formation; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="inhibitor of FtsZ ring polymerization" /protein_id="AAC74260.1" /db_xref="GI:1787424" /db_xref="ASAP:ABE-0003941" /db_xref="UniProtKB/Swiss-Prot:P18196" /db_xref="EcoGene:EG10596" /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK EKAPRPAPTPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL QLVENALTVQPLN" gene 1096121..1096489 /gene="ycgJ" /locus_tag="b1177" /gene_synonym="ECK1165" /gene_synonym="JW1166" /db_xref="EcoGene:EG13891" CDS 1096121..1096489 /gene="ycgJ" /locus_tag="b1177" /gene_synonym="ECK1165" /gene_synonym="JW1166" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74261.1" /db_xref="GI:1787425" /db_xref="ASAP:ABE-0003946" /db_xref="UniProtKB/Swiss-Prot:P76001" /db_xref="EcoGene:EG13891" /translation="MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYIC VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD GKRSGKINQTTTKMLFMCRE" gene complement(1096592..1096993) /gene="pliG" /locus_tag="b1178" /gene_synonym="ECK1166" /gene_synonym="JW1167" /gene_synonym="ycgK" /db_xref="EcoGene:EG13892" CDS complement(1096592..1096993) /gene="pliG" /locus_tag="b1178" /gene_synonym="ECK1166" /gene_synonym="JW1167" /gene_synonym="ycgK" /codon_start=1 /transl_table=11 /product="periplasmic inhibitor of g-type lysozyme" /protein_id="AAC74262.1" /db_xref="GI:1787426" /db_xref="ASAP:ABE-0003948" /db_xref="UniProtKB/Swiss-Prot:P76002" /db_xref="EcoGene:EG13892" /translation="MKIKSIRKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP ASGKYELRVLQTRNDARKNKTKKYNVDIQIK" gene 1097235..1097528 /gene="ycgL" /locus_tag="b1179" /gene_synonym="ECK1167" /gene_synonym="JW1168" /db_xref="EcoGene:EG13893" CDS 1097235..1097528 /gene="ycgL" /locus_tag="b1179" /gene_synonym="ECK1167" /gene_synonym="JW1168" /codon_start=1 /transl_table=11 /product="UPF0745 family protein" /protein_id="AAC74263.2" /db_xref="GI:308199518" /db_xref="ASAP:ABE-0003954" /db_xref="UniProtKB/Swiss-Prot:P0AB43" /db_xref="EcoGene:EG13893" /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL PLDGRKKLVNADIEKVKQALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK" gene 1097600..1098259 /gene="ycgM" /locus_tag="b1180" /gene_synonym="ECK1168" /gene_synonym="JW1169" /db_xref="EcoGene:EG13894" CDS 1097600..1098259 /gene="ycgM" /locus_tag="b1180" /gene_synonym="ECK1168" /gene_synonym="JW1169" /function="putative enzyme; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="putative isomerase/hydrolase" /protein_id="AAC74264.1" /db_xref="GI:1787428" /db_xref="ASAP:ABE-0003957" /db_xref="UniProtKB/Swiss-Prot:P76004" /db_xref="EcoGene:EG13894" /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQG TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV L" gene 1098336..1098797 /gene="ycgN" /locus_tag="b1181" /gene_synonym="ECK1169" /gene_synonym="JW5180" /db_xref="EcoGene:EG13895" CDS 1098336..1098797 /gene="ycgN" /locus_tag="b1181" /gene_synonym="ECK1169" /gene_synonym="JW5180" /codon_start=1 /transl_table=11 /product="UPF0153 family cysteine cluster protein" /protein_id="AAC74265.3" /db_xref="GI:145693117" /db_xref="ASAP:ABE-0003960" /db_xref="UniProtKB/Swiss-Prot:P0A8L5" /db_xref="EcoGene:EG13895" /translation="MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA EGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ" gene complement(1099004..1099915) /gene="hlyE" /locus_tag="b1182" /gene_synonym="clyA" /gene_synonym="ECK1170" /gene_synonym="hpr" /gene_synonym="JW5181" /gene_synonym="sheA" /gene_synonym="ycgD" /db_xref="EcoGene:EG13243" CDS complement(1099004..1099915) /gene="hlyE" /locus_tag="b1182" /gene_synonym="clyA" /gene_synonym="ECK1170" /gene_synonym="hpr" /gene_synonym="JW5181" /gene_synonym="sheA" /gene_synonym="ycgD" /function="phenotype; Not classified" /note="GO_component: GO:0005576 - extracellular region" /codon_start=1 /transl_table=11 /product="hemolysin E" /protein_id="AAC74266.2" /db_xref="GI:87081853" /db_xref="ASAP:ABE-0003962" /db_xref="UniProtKB/Swiss-Prot:P77335" /db_xref="EcoGene:EG13243" /translation="MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFD EYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFS EKSSYFQSQVDKIRKEAYAGAAAGVVAGPFGLIISYSIAAGVVEGKLIPELKNKLKSV QNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKE AAKKMINTCNEYQKRHGKKTLFEVPEV" gene 1100288..1100707 /gene="umuD" /locus_tag="b1183" /gene_synonym="ECK1171" /gene_synonym="JW1172" /db_xref="EcoGene:EG11057" CDS 1100288..1100707 /gene="umuD" /locus_tag="b1183" /gene_synonym="ECK1171" /gene_synonym="JW1172" /EC_number="3.4.21.-" /function="putative enzyme; DNA - replication, repair, restriction/modification" /note="SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006350 - transcription; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="translesion error-prone DNA polymerase V subunit; RecA-activated auto-protease" /protein_id="AAC74267.1" /db_xref="GI:1787431" /db_xref="ASAP:ABE-0003974" /db_xref="UniProtKB/Swiss-Prot:P0AG11" /db_xref="EcoGene:EG11057" /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR" gene 1100707..1101975 /gene="umuC" /locus_tag="b1184" /gene_synonym="ECK1172" /gene_synonym="JW1173" /gene_synonym="uvm" /db_xref="EcoGene:EG11056" CDS 1100707..1101975 /gene="umuC" /locus_tag="b1184" /gene_synonym="ECK1172" /gene_synonym="JW1173" /gene_synonym="uvm" /function="putative enzyme; DNA - replication, repair, restriction/modification" /note="SOS mutagenesis and repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="translesion error-prone DNA polymerase V subunit; DNA polymerase activity" /protein_id="AAC74268.1" /db_xref="GI:1787432" /db_xref="ASAP:ABE-0003977" /db_xref="UniProtKB/Swiss-Prot:P04152" /db_xref="EcoGene:EG11056" /translation="MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA GQGIQQQWQMKRAMLSPRYTTRSSDLLRVK" gene complement(1102021..1102551) /gene="dsbB" /locus_tag="b1185" /gene_synonym="dsbX" /gene_synonym="ECK1173" /gene_synonym="iarB" /gene_synonym="JW5182" /gene_synonym="roxB" /gene_synonym="ycgA" /db_xref="EcoGene:EG11393" CDS complement(1102021..1102551) /gene="dsbB" /locus_tag="b1185" /gene_synonym="dsbX" /gene_synonym="ECK1173" /gene_synonym="iarB" /gene_synonym="JW5182" /gene_synonym="roxB" /gene_synonym="ycgA" /function="enzyme; Surface structures" /note="reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella; GO_component: GO:0019861 - flagellum; GO_component: GO:0009289 - pilus; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006457 - protein folding; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I" /protein_id="AAC74269.1" /db_xref="GI:1787433" /db_xref="ASAP:ABE-0003979" /db_xref="UniProtKB/Swiss-Prot:P0A6M2" /db_xref="EcoGene:EG11393" /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV VISQPFKAKKRDLFGR" gene complement(1102697..1104238) /gene="nhaB" /locus_tag="b1186" /gene_synonym="ECK1174" /gene_synonym="JW1175" /db_xref="EcoGene:EG11392" CDS complement(1102697..1104238) /gene="nhaB" /locus_tag="b1186" /gene_synonym="ECK1174" /gene_synonym="JW1175" /function="transport; Transport of small molecules: Cations" /note="Na+/H+ antiporter, pH independent; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009268 - response to pH" /codon_start=1 /transl_table=11 /product="sodium:proton antiporter" /protein_id="AAC74270.1" /db_xref="GI:1787435" /db_xref="ASAP:ABE-0003984" /db_xref="UniProtKB/Swiss-Prot:P0AFA7" /db_xref="EcoGene:EG11392" /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG WIATL" gene 1104459..1105178 /gene="fadR" /locus_tag="b1187" /gene_synonym="dec" /gene_synonym="ECK1175" /gene_synonym="JW1176" /gene_synonym="ole" /gene_synonym="oleR" /gene_synonym="thdB" /db_xref="EcoGene:EG10281" CDS 1104459..1105178 /gene="fadR" /locus_tag="b1187" /gene_synonym="dec" /gene_synonym="ECK1175" /gene_synonym="JW1176" /gene_synonym="ole" /gene_synonym="oleR" /gene_synonym="thdB" /function="regulator; Degradation of small molecules: Fatty acids" /note="negative regulator for fad regulon, and positive activator of fabA; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="fatty acid metabolism regulon transcriptional regulator" /protein_id="AAC74271.1" /db_xref="GI:1787436" /db_xref="ASAP:ABE-0003988" /db_xref="UniProtKB/Swiss-Prot:P0A8V6" /db_xref="EcoGene:EG10281" /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE SGEIWHRMQKNLPGDLAIQGR" gene complement(1105230..1106762) /gene="ycgB" /locus_tag="b1188" /gene_synonym="ECK1176" /gene_synonym="JW1177" /db_xref="EcoGene:EG11516" CDS complement(1105230..1106762) /gene="ycgB" /locus_tag="b1188" /gene_synonym="ECK1176" /gene_synonym="JW1177" /codon_start=1 /transl_table=11 /product="SpoVR family stationary phase protein" /protein_id="AAC74272.1" /db_xref="GI:1787437" /db_xref="ASAP:ABE-0003990" /db_xref="UniProtKB/Swiss-Prot:P29013" /db_xref="EcoGene:EG11516" /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMG NL" gene 1107092..1108390 /gene="dadA" /locus_tag="b1189" /gene_synonym="dadR" /gene_synonym="ECK1177" /gene_synonym="JW1178" /db_xref="EcoGene:EG11407" CDS 1107092..1108390 /gene="dadA" /locus_tag="b1189" /gene_synonym="dadR" /gene_synonym="ECK1177" /gene_synonym="JW1178" /EC_number="1.4.99.1" /function="enzyme; Degradation of small molecules: Amino acids" /note="D-amino acid dehydrogenase subunit; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase" /protein_id="AAC74273.1" /db_xref="GI:1787438" /db_xref="ASAP:ABE-0003995" /db_xref="UniProtKB/Swiss-Prot:P0A6J5" /db_xref="EcoGene:EG11407" /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS" gene 1108400..1109470 /gene="dadX" /locus_tag="b1190" /gene_synonym="alnB" /gene_synonym="dadB" /gene_synonym="ECK1178" /gene_synonym="JW1179" /gene_synonym="msuA?" /db_xref="EcoGene:EG11408" CDS 1108400..1109470 /gene="dadX" /locus_tag="b1190" /gene_synonym="alnB" /gene_synonym="dadB" /gene_synonym="ECK1178" /gene_synonym="JW1179" /gene_synonym="msuA?" /EC_number="5.1.1.1" /function="enzyme; Degradation of small molecules: Amino acids" /note="alanine racemase 2, catabolic; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006523 - alanine biosynthetic process" /codon_start=1 /transl_table=11 /product="alanine racemase, catabolic, PLP-binding" /protein_id="AAC74274.1" /db_xref="GI:1787439" /db_xref="ASAP:ABE-0003997" /db_xref="UniProtKB/Swiss-Prot:P29012" /db_xref="EcoGene:EG11408" /translation="MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIE RIWSAIGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHS NWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHF AEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPS GQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGY PRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAA AAGTVGYELMCALALRVPVVTV" gene complement(1109856..1111592) /gene="cvrA" /locus_tag="b1191" /gene_synonym="ECK1179" /gene_synonym="JW5184" /gene_synonym="ycgO" /db_xref="EcoGene:EG13896" CDS complement(1109856..1111592) /gene="cvrA" /locus_tag="b1191" /gene_synonym="ECK1179" /gene_synonym="JW5184" /gene_synonym="ycgO" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative cation/proton antiporter" /protein_id="AAC74275.2" /db_xref="GI:87081854" /db_xref="ASAP:ABE-0003999" /db_xref="UniProtKB/Swiss-Prot:P76007" /db_xref="EcoGene:EG13896" /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS NDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIAL PAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA DVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLK IGVRVAEEEAES" gene complement(1111687..1112601) /gene="ldcA" /locus_tag="b1192" /gene_synonym="ECK1180" /gene_synonym="JW1181" /gene_synonym="ycgQ" /db_xref="EcoGene:EG13898" CDS complement(1111687..1112601) /gene="ldcA" /locus_tag="b1192" /gene_synonym="ECK1180" /gene_synonym="JW1181" /gene_synonym="ycgQ" /EC_number="3.4.17.13" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A" /protein_id="AAC74276.1" /db_xref="GI:1787441" /db_xref="ASAP:ABE-0004002" /db_xref="UniProtKB/Swiss-Prot:P76008" /db_xref="EcoGene:EG13898" /translation="MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCE RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI CGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQ GEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH AGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVT LPLGAHAILNNTREGTQLTISGHPVLKM" gene 1112701..1113312 /gene="emtA" /locus_tag="b1193" /gene_synonym="ECK1181" /gene_synonym="JW5821" /gene_synonym="mltE" /gene_synonym="sltZ" /gene_synonym="ycgP" /db_xref="EcoGene:EG13897" CDS 1112701..1113312 /gene="emtA" /locus_tag="b1193" /gene_synonym="ECK1181" /gene_synonym="JW5821" /gene_synonym="mltE" /gene_synonym="sltZ" /gene_synonym="ycgP" /EC_number="3.2.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="murein transglycosylase E; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="lytic murein endotransglycosylase E" /protein_id="AAC74277.2" /db_xref="GI:87081855" /db_xref="ASAP:ABE-0004006" /db_xref="UniProtKB/Swiss-Prot:P0C960" /db_xref="EcoGene:EG13897" /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD RKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM" gene complement(1113314..1114048) /gene="ycgR" /locus_tag="b1194" /gene_synonym="ECK1182" /gene_synonym="JW1183" /db_xref="EcoGene:EG13899" CDS complement(1113314..1114048) /gene="ycgR" /locus_tag="b1194" /gene_synonym="ECK1182" /gene_synonym="JW1183" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="flagellar velocity braking protein, c-di-GMP-regulated" /protein_id="AAC74278.1" /db_xref="GI:1787443" /db_xref="ASAP:ABE-0004009" /db_xref="UniProtKB/Swiss-Prot:P76010" /db_xref="EcoGene:EG13899" /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKLL AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP TVERQLQRIIFSLEREAREKADKVRD" gene 1114249..1114503 /gene="ymgE" /locus_tag="b1195" /gene_synonym="ECK1183" /gene_synonym="JW1184" /gene_synonym="tag" /db_xref="EcoGene:EG14338" CDS 1114249..1114503 /gene="ymgE" /locus_tag="b1195" /gene_synonym="ECK1183" /gene_synonym="JW1184" /gene_synonym="tag" /note="transglycosylase asociated protein" /codon_start=1 /transl_table=11 /product="UPF0410 family putative inner membrane protein" /protein_id="AAC74279.1" /db_xref="GI:1787445" /db_xref="ASAP:ABE-0004014" /db_xref="UniProtKB/Swiss-Prot:P76011" /db_xref="EcoGene:EG14338" /translation="MGIIAWIIFDLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGG WLATMFGIGGSISGFNLHSFLVAVVGAILVLGIFRLLRRE" gene 1114681..1115121 /gene="ycgY" /locus_tag="b1196" /gene_synonym="ECK1184" /gene_synonym="JW1185" /db_xref="EcoGene:EG14275" CDS 1114681..1115121 /gene="ycgY" /locus_tag="b1196" /gene_synonym="ECK1184" /gene_synonym="JW1185" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74280.1" /db_xref="GI:1787446" /db_xref="ASAP:ABE-0004019" /db_xref="UniProtKB/Swiss-Prot:P76012" /db_xref="EcoGene:EG14275" /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY SQRRRKSPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV" gene complement(1115200..1116897) /gene="treA" /locus_tag="b1197" /gene_synonym="ECK1185" /gene_synonym="JW1186" /gene_synonym="osmA" /db_xref="EcoGene:EG11017" CDS complement(1115200..1116897) /gene="treA" /locus_tag="b1197" /gene_synonym="ECK1185" /gene_synonym="JW1186" /gene_synonym="osmA" /EC_number="3.2.1.28" /function="enzyme; Osmotic adaptation" /note="trehalase, periplasmic; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="periplasmic trehalase" /protein_id="AAC74281.1" /db_xref="GI:1787447" /db_xref="ASAP:ABE-0004021" /db_xref="UniProtKB/Swiss-Prot:P13482" /db_xref="EcoGene:EG11017" /translation="MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILL GPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPK EGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWD SYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELL AQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTP RPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVP VDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL KSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAP NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGG GGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPTP" repeat_region 1117179..1117209 /note="REP107 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1117217..1118635) /gene="dhaM" /locus_tag="b1198" /gene_synonym="dhaH" /gene_synonym="ECK1186" /gene_synonym="JW5185" /gene_synonym="ptsD" /gene_synonym="ycgC" /db_xref="EcoGene:EG12399" CDS complement(1117217..1118635) /gene="dhaM" /locus_tag="b1198" /gene_synonym="dhaH" /gene_synonym="ECK1186" /gene_synonym="JW5185" /gene_synonym="ptsD" /gene_synonym="ycgC" /note="PTS hybrid protein" /codon_start=1 /transl_table=11 /product="putative dihydroxyacetone-specific PTS enzymes: HPr, EI components" /protein_id="AAC74282.4" /db_xref="GI:226510935" /db_xref="ASAP:ABE-0004024" /db_xref="UniProtKB/Swiss-Prot:P37349" /db_xref="EcoGene:EG12399" /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVE GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTL TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASEL LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL YAIQPEETLTLDVKTQRFNRQG" gene complement(1118646..1119278) /gene="dhaL" /locus_tag="b1199" /gene_synonym="dhaK2" /gene_synonym="ECK1187" /gene_synonym="JW5186" /gene_synonym="ptsD" /gene_synonym="ycgS" /db_xref="EcoGene:EG13900" CDS complement(1118646..1119278) /gene="dhaL" /locus_tag="b1199" /gene_synonym="dhaK2" /gene_synonym="ECK1187" /gene_synonym="JW5186" /gene_synonym="ptsD" /gene_synonym="ycgS" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, C-terminal domain" /protein_id="AAC74283.1" /db_xref="GI:1787449" /db_xref="ASAP:ABE-0004026" /db_xref="UniProtKB/Swiss-Prot:P76014" /db_xref="EcoGene:EG13900" /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE" gene complement(1119289..1120359) /gene="dhaK" /locus_tag="b1200" /gene_synonym="dhaK1" /gene_synonym="ECK1188" /gene_synonym="JW5187" /gene_synonym="ptsD" /gene_synonym="ycgT" /db_xref="EcoGene:EG13901" CDS complement(1119289..1120359) /gene="dhaK" /locus_tag="b1200" /gene_synonym="dhaK1" /gene_synonym="ECK1188" /gene_synonym="JW5187" /gene_synonym="ptsD" /gene_synonym="ycgT" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit" /protein_id="AAC74284.2" /db_xref="GI:87081857" /db_xref="ASAP:ABE-0004029" /db_xref="UniProtKB/Swiss-Prot:P76015" /db_xref="EcoGene:EG13901" /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH GEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK VDDETLALWDAPVHTPALNWGK" gene 1120587..1122506 /gene="dhaR" /locus_tag="b1201" /gene_synonym="ECK1189" /gene_synonym="JW5188" /gene_synonym="ptsD" /gene_synonym="ycgU" /db_xref="EcoGene:EG13902" CDS 1120587..1122506 /gene="dhaR" /locus_tag="b1201" /gene_synonym="ECK1189" /gene_synonym="JW5188" /gene_synonym="ptsD" /gene_synonym="ycgU" /function="putative regulator; Not classified" /note="GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="dhaKLM operon transcription activator" /protein_id="AAC74285.2" /db_xref="GI:87081858" /db_xref="ASAP:ABE-0004033" /db_xref="UniProtKB/Swiss-Prot:P76016" /db_xref="EcoGene:EG13902" /translation="MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFA SIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGF NDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQVLWNWAFCATPLFDSKGRLTGT IALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVIS WDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFE SQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQT RRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAAL AEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDA RRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNN KLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPE HLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRK MKQHGIDAGQFKRRV" gene complement(1122606..1125473) /gene="ycgV" /locus_tag="b1202" /gene_synonym="ECK1190" /gene_synonym="JW1193" /db_xref="EcoGene:EG13903" CDS complement(1122606..1125473) /gene="ycgV" /locus_tag="b1202" /gene_synonym="ECK1190" /gene_synonym="JW1193" /function="putative factor; Not classified" /note="putative adhesion and penetration protein; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative adhesin" /protein_id="AAC74286.1" /db_xref="GI:1787452" /db_xref="ASAP:ABE-0004035" /db_xref="UniProtKB/Swiss-Prot:P76017" /db_xref="EcoGene:EG13903" /translation="MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLL IAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVND ASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNN ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSA NALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDAIINFTGTAAQRNS IFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGA RGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKG GLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFAS HGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRN QGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPT PNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRM GDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMPLYVGLY IGSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVIKASRQKNSFHVLDSQNNG VNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMTMKASNGLNIHLN HYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLLNNSREKYSFKGNGW NNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF" gene complement(1126242..1127333) /gene="ychF" /locus_tag="b1203" /gene_synonym="ECK1191" /gene_synonym="engD" /gene_synonym="gtp1" /gene_synonym="JW1194" /db_xref="EcoGene:EG11404" CDS complement(1126242..1127333) /gene="ychF" /locus_tag="b1203" /gene_synonym="ECK1191" /gene_synonym="engD" /gene_synonym="gtp1" /gene_synonym="JW1194" /function="enzyme; Not classified" /note="putative GTP-binding protein" /codon_start=1 /transl_table=11 /product="catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated" /protein_id="AAC74287.1" /db_xref="GI:1787454" /db_xref="ASAP:ABE-0004038" /db_xref="UniProtKB/Swiss-Prot:P0ABU2" /db_xref="EcoGene:EG11404" /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ GAKEAGKMRAEGKDYIVKDGDVMNFLFNV" gene complement(1127450..1128034) /gene="pth" /locus_tag="b1204" /gene_synonym="asuA?" /gene_synonym="ECK1192" /gene_synonym="JW1195" /gene_synonym="rap" /db_xref="EcoGene:EG10785" CDS complement(1127450..1128034) /gene="pth" /locus_tag="b1204" /gene_synonym="asuA?" /gene_synonym="ECK1192" /gene_synonym="JW1195" /gene_synonym="rap" /EC_number="3.1.1.29" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 1833189" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="AAC74288.1" /db_xref="GI:1787455" /db_xref="ASAP:ABE-0004043" /db_xref="UniProtKB/Swiss-Prot:P0A7D1" /db_xref="EcoGene:EG10785" /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ" gene 1128312..1128590 /gene="ychH" /locus_tag="b1205" /gene_synonym="ECK1193" /gene_synonym="JW1196" /db_xref="EcoGene:EG11533" CDS 1128312..1128590 /gene="ychH" /locus_tag="b1205" /gene_synonym="ECK1193" /gene_synonym="JW1196" /codon_start=1 /transl_table=11 /product="DUF2583 family putative inner membrane protein" /protein_id="AAC74289.1" /db_xref="GI:1787456" /db_xref="ASAP:ABE-0004049" /db_xref="UniProtKB/Swiss-Prot:P0AB49" /db_xref="EcoGene:EG11533" /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS" gene complement(1128645..1130324) /gene="dauA" /locus_tag="b1206" /gene_synonym="ECK1194" /gene_synonym="JW5189" /gene_synonym="ychM" /db_xref="EcoGene:EG12392" CDS complement(1128645..1130324) /gene="dauA" /locus_tag="b1206" /gene_synonym="ECK1194" /gene_synonym="JW5189" /gene_synonym="ychM" /note="putative sulfate transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="C4-dicarboxylic acid transporter" /protein_id="AAC74290.2" /db_xref="GI:87081859" /db_xref="ASAP:ABE-0004051" /db_xref="UniProtKB/Swiss-Prot:P0AFR2" /db_xref="EcoGene:EG12392" /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL AGLLVATLLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL" gene complement(1130449..1131396) /gene="prs" /locus_tag="b1207" /gene_synonym="dnaR" /gene_synonym="ECK1195" /gene_synonym="JW1198" /gene_synonym="prsA" /db_xref="EcoGene:EG10774" CDS complement(1130449..1131396) /gene="prs" /locus_tag="b1207" /gene_synonym="dnaR" /gene_synonym="ECK1195" /gene_synonym="JW1198" /gene_synonym="prsA" /EC_number="2.7.6.1" /function="enzyme; Purine ribonucleotide biosynthesis" /note="phosphoribosylpyrophosphate synthetase; GO_process: GO:0009152 - purine ribonucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylpyrophosphate synthase" /protein_id="AAC74291.1" /db_xref="GI:1787458" /db_xref="ASAP:ABE-0004054" /db_xref="UniProtKB/Swiss-Prot:P0A717" /db_xref="EcoGene:EG10774" /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH" gene complement(1131547..1132398) /gene="ispE" /locus_tag="b1208" /gene_synonym="ECK1196" /gene_synonym="ipk" /gene_synonym="JW1199" /gene_synonym="ychB" /db_xref="EcoGene:EG11294" CDS complement(1131547..1132398) /gene="ispE" /locus_tag="b1208" /gene_synonym="ECK1196" /gene_synonym="ipk" /gene_synonym="JW1199" /gene_synonym="ychB" /EC_number="2.7.1.148" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2-C-methylerythritol kinase" /protein_id="AAC74292.1" /db_xref="GI:1787459" /db_xref="ASAP:ABE-0004056" /db_xref="UniProtKB/Swiss-Prot:P62615" /db_xref="EcoGene:EG11294" /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLS PLHRAML" gene complement(1132398..1133021) /gene="lolB" /locus_tag="b1209" /gene_synonym="ECK1197" /gene_synonym="hemM" /gene_synonym="JW1200" /gene_synonym="ychC" /db_xref="EcoGene:EG11293" CDS complement(1132398..1133021) /gene="lolB" /locus_tag="b1209" /gene_synonym="ECK1197" /gene_synonym="hemM" /gene_synonym="JW1200" /gene_synonym="ychC" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="outer-membrane lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="lipoprotein localization factor" /protein_id="AAC74293.1" /db_xref="GI:1787460" /db_xref="ASAP:ABE-0004059" /db_xref="UniProtKB/Swiss-Prot:P61320" /db_xref="EcoGene:EG11293" /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI TYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK" gene 1133235..1134491 /gene="hemA" /locus_tag="b1210" /gene_synonym="ECK1198" /gene_synonym="gtrA" /gene_synonym="JW1201" /db_xref="EcoGene:EG10427" CDS 1133235..1134491 /gene="hemA" /locus_tag="b1210" /gene_synonym="ECK1198" /gene_synonym="gtrA" /gene_synonym="JW1201" /EC_number="1.2.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="glutamyl-tRNA reductase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="glutamyl tRNA reductase" /protein_id="AAC74294.1" /db_xref="GI:1787461" /db_xref="ASAP:ABE-0004064" /db_xref="UniProtKB/Swiss-Prot:P0A6X1" /db_xref="EcoGene:EG10427" /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER AQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA WLRAQSASETIREYRSQAEQVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP TKSLQQAARDGDNERLNILRDSLGLE" gene 1134533..1135615 /gene="prfA" /locus_tag="b1211" /gene_synonym="ECK1199" /gene_synonym="JW1202" /gene_synonym="sueB" /gene_synonym="uar" /gene_synonym="ups?" /db_xref="EcoGene:EG10761" CDS 1134533..1135615 /gene="prfA" /locus_tag="b1211" /gene_synonym="ECK1199" /gene_synonym="JW1202" /gene_synonym="sueB" /gene_synonym="uar" /gene_synonym="ups?" /function="factor; Proteins - translation and modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="peptide chain release factor RF-1" /protein_id="AAC74295.1" /db_xref="GI:1787462" /db_xref="ASAP:ABE-0004066" /db_xref="UniProtKB/Swiss-Prot:P0A7I0" /db_xref="EcoGene:EG10761" /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME GKLDMLIEPIIQEHQADQLAALSEQE" gene 1135615..1136448 /gene="prmC" /locus_tag="b1212" /gene_synonym="ECK1200" /gene_synonym="hemK" /gene_synonym="JW1203" /db_xref="EcoGene:EG12424" CDS 1135615..1136448 /gene="prmC" /locus_tag="b1212" /gene_synonym="ECK1200" /gene_synonym="hemK" /gene_synonym="JW1203" /EC_number="2.1.1.-" /function="putative enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="possible protoporphyrinogen oxidase" /codon_start=1 /transl_table=11 /product="RF-1 and RF-2 N5-glutamine methyltransferase" /protein_id="AAC74296.1" /db_xref="GI:1787463" /db_xref="ASAP:ABE-0004068" /db_xref="UniProtKB/Swiss-Prot:P0ACC1" /db_xref="EcoGene:EG12424" /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY Q" gene 1136445..1136837 /gene="ychQ" /locus_tag="b1213" /gene_synonym="ECK1201" /gene_synonym="JW1204" /gene_synonym="sirB2" /db_xref="EcoGene:EG14293" CDS 1136445..1136837 /gene="ychQ" /locus_tag="b1213" /gene_synonym="ECK1201" /gene_synonym="JW1204" /gene_synonym="sirB2" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="SIRB family inner membrane protein" /protein_id="AAC74297.1" /db_xref="GI:1787464" /db_xref="ASAP:ABE-0004071" /db_xref="UniProtKB/Swiss-Prot:Q46755" /db_xref="EcoGene:EG14293" /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV PPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ ARIIAFPLALVVLYIIIKLATTKVPLLG" gene 1136841..1137650 /gene="ychA" /locus_tag="b1214" /gene_synonym="ECK1202" /gene_synonym="JW1205" /gene_synonym="sirB1" /db_xref="EcoGene:EG11251" CDS 1136841..1137650 /gene="ychA" /locus_tag="b1214" /gene_synonym="ECK1202" /gene_synonym="JW1205" /gene_synonym="sirB1" /function="putative enzyme; Not classified" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="transglutaminase-like TPR-repeat protein" /protein_id="AAC74298.1" /db_xref="GI:1787465" /db_xref="ASAP:ABE-0004074" /db_xref="UniProtKB/Swiss-Prot:P0AGM5" /db_xref="EcoGene:EG11251" /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH" gene 1137686..1138540 /gene="kdsA" /locus_tag="b1215" /gene_synonym="ECK1203" /gene_synonym="JW1206" /db_xref="EcoGene:EG10518" CDS 1137686..1138540 /gene="kdsA" /locus_tag="b1215" /gene_synonym="ECK1203" /gene_synonym="JW1206" /EC_number="2.5.1.55" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 7775423,9298646" /note="2-dehydro-3-deoxyphosphooctulonate aldolase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process; GO_process: GO:0009248 - K antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate synthase" /protein_id="AAC74299.1" /db_xref="GI:1787466" /db_xref="ASAP:ABE-0004077" /db_xref="UniProtKB/Swiss-Prot:P0A715" /db_xref="EcoGene:EG10518" /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG FEELDTSK" gene complement(1138689..1138796) /gene="ldrA" /locus_tag="b4419" /gene_synonym="ECK1204" /gene_synonym="JW5957" /db_xref="EcoGene:EG14403" CDS complement(1138689..1138796) /gene="ldrA" /locus_tag="b4419" /gene_synonym="ECK1204" /gene_synonym="JW5957" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="AAT48126.1" /db_xref="GI:48994880" /db_xref="ASAP:ABE-0047280" /db_xref="UniProtKB/Swiss-Prot:Q6BF86" /db_xref="EcoGene:EG14403" /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK" gene 1138844..1138910 /gene="rdlA" /locus_tag="b4420" /gene_synonym="ECK1205" /gene_synonym="JWR0229" /db_xref="EcoGene:EG31139" ncRNA 1138844..1138910 /ncRNA_class="antisense_RNA" /gene="rdlA" /locus_tag="b4420" /gene_synonym="ECK1205" /gene_synonym="JWR0229" /product="sRNA antisense regulator affects LdrA translation; proposed addiction module in LDR-A repeat, with toxic peptide LdrA" /note="antisense RNA, trans-acting regulator of ldrA translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047243" /db_xref="EcoGene:EG31139" gene complement(1139224..1139331) /gene="ldrB" /locus_tag="b4421" /gene_synonym="ECK1206" /gene_synonym="JW5958" /db_xref="EcoGene:EG14404" CDS complement(1139224..1139331) /gene="ldrB" /locus_tag="b4421" /gene_synonym="ECK1206" /gene_synonym="JW5958" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="AAT48127.1" /db_xref="GI:48994881" /db_xref="ASAP:ABE-0047281" /db_xref="UniProtKB/Swiss-Prot:Q6BF87" /db_xref="EcoGene:EG14404" /translation="MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK" gene 1139379..1139444 /gene="rdlB" /locus_tag="b4422" /gene_synonym="ECK1207" /gene_synonym="JWR0230" /db_xref="EcoGene:EG31140" ncRNA 1139379..1139444 /ncRNA_class="antisense_RNA" /gene="rdlB" /locus_tag="b4422" /gene_synonym="ECK1207" /gene_synonym="JWR0230" /product="sRNA antisense regulator affects LdrB translation; proposed addiction module in LDR-B repeat, with toxic peptide LdrB" /note="antisense RNA, trans-acting regulator of ldrB translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047244" /db_xref="EcoGene:EG31140" gene complement(1139759..1139866) /gene="ldrC" /locus_tag="b4423" /gene_synonym="ECK1208" /gene_synonym="JW5959" /db_xref="EcoGene:EG14405" CDS complement(1139759..1139866) /gene="ldrC" /locus_tag="b4423" /gene_synonym="ECK1208" /gene_synonym="JW5959" /note="small toxic polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="AAT48128.1" /db_xref="GI:48994882" /db_xref="ASAP:ABE-0047282" /db_xref="UniProtKB/Swiss-Prot:Q6BF86" /db_xref="EcoGene:EG14405" /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK" gene 1139914..1139981 /gene="rdlC" /locus_tag="b4424" /gene_synonym="ECK1209" /gene_synonym="JWR0231" /db_xref="EcoGene:EG31141" ncRNA 1139914..1139981 /ncRNA_class="antisense_RNA" /gene="rdlC" /locus_tag="b4424" /gene_synonym="ECK1209" /gene_synonym="JWR0231" /product="sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR-C repeat, with toxic peptide LdrC" /note="antisense RNA, trans-acting regulator of ldrC translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047245" /db_xref="EcoGene:EG31141" gene complement(1140270..1141370) /gene="chaA" /locus_tag="b1216" /gene_synonym="ECK1210" /gene_synonym="JW1207" /db_xref="EcoGene:EG11753" CDS complement(1140270..1141370) /gene="chaA" /locus_tag="b1216" /gene_synonym="ECK1210" /gene_synonym="JW1207" /function="transport; Transport of small molecules: Cations" /note="sodium-calcium/proton antiporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="calcium/sodium:proton antiporter" /protein_id="AAC74300.1" /db_xref="GI:1787468" /db_xref="ASAP:ABE-0004082" /db_xref="UniProtKB/Swiss-Prot:P31801" /db_xref="EcoGene:EG11753" /translation="MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINL LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH SSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGAL KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA" gene 1141640..1141870 /gene="chaB" /locus_tag="b1217" /gene_synonym="ECK1211" /gene_synonym="JW1208" /db_xref="EcoGene:EG12402" CDS 1141640..1141870 /gene="chaB" /locus_tag="b1217" /gene_synonym="ECK1211" /gene_synonym="JW1208" /function="regulator; Transport of small molecules: Cations" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cation transport regulator" /protein_id="AAC74301.1" /db_xref="GI:1787469" /db_xref="ASAP:ABE-0004087" /db_xref="UniProtKB/Swiss-Prot:P0AE63" /db_xref="EcoGene:EG12402" /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRD DASREETAHKVAWAAVKHEYAKGDDDKWHKKS" gene 1142028..1142723 /gene="chaC" /locus_tag="b1218" /gene_synonym="ECK1212" /gene_synonym="JW1209" /db_xref="EcoGene:EG12403" CDS 1142028..1142723 /gene="chaC" /locus_tag="b1218" /gene_synonym="ECK1212" /gene_synonym="JW1209" /function="transport; Transport of small molecules: Cations" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cation transport regulator" /protein_id="AAC74302.2" /db_xref="GI:145693119" /db_xref="ASAP:ABE-0004089" /db_xref="UniProtKB/Swiss-Prot:P39163" /db_xref="EcoGene:EG12403" /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA ENFPDGVLRPGFA" gene complement(1142767..1143120) /gene="ychN" /locus_tag="b1219" /gene_synonym="ECK1213" /gene_synonym="JW1210" /db_xref="EcoGene:EG12404" CDS complement(1142767..1143120) /gene="ychN" /locus_tag="b1219" /gene_synonym="ECK1213" /gene_synonym="JW1210" /codon_start=1 /transl_table=11 /product="putative sulfur relay protein" /protein_id="AAC74303.1" /db_xref="GI:1787471" /db_xref="ASAP:ABE-0004091" /db_xref="UniProtKB/Swiss-Prot:P0AB52" /db_xref="EcoGene:EG12404" /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV ELAQWTLSADKVLTF" gene 1143305..1144699 /gene="ychO" /locus_tag="b1220" /gene_synonym="ECK1214" /gene_synonym="JW1211" /gene_synonym="ychP" /db_xref="EcoGene:EG12405" CDS 1143305..1144699 /gene="ychO" /locus_tag="b1220" /gene_synonym="ECK1214" /gene_synonym="JW1211" /gene_synonym="ychP" /function="putative factor; Not classified" /note="conserved protein, invasin-like" /codon_start=1 /transl_table=11 /product="putative invasin" /protein_id="AAC74304.2" /db_xref="GI:145693120" /db_xref="ASAP:ABE-0004095" /db_xref="UniProtKB/Swiss-Prot:P39165" /db_xref="EcoGene:EG12405" /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNV GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQT ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVE PFDALSNDELRWEP" gene complement(1144700..1145350) /gene="narL" /locus_tag="b1221" /gene_synonym="ECK1215" /gene_synonym="frdR" /gene_synonym="JW1212" /db_xref="EcoGene:EG10643" CDS complement(1144700..1145350) /gene="narL" /locus_tag="b1221" /gene_synonym="ECK1215" /gene_synonym="frdR" /gene_synonym="JW1212" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with NarX" /protein_id="AAC74305.1" /db_xref="GI:1787473" /db_xref="ASAP:ABE-0004097" /db_xref="UniProtKB/Swiss-Prot:P0AF28" /db_xref="EcoGene:EG10643" /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF" gene complement(1145343..1147139) /gene="narX" /locus_tag="b1222" /gene_synonym="ECK1216" /gene_synonym="frdR" /gene_synonym="JW1213" /gene_synonym="narR" /db_xref="EcoGene:EG10646" CDS complement(1145343..1147139) /gene="narX" /locus_tag="b1222" /gene_synonym="ECK1216" /gene_synonym="frdR" /gene_synonym="JW1213" /gene_synonym="narR" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with NarL" /protein_id="AAC74306.1" /db_xref="GI:1787474" /db_xref="ASAP:ABE-0004099" /db_xref="UniProtKB/Swiss-Prot:P0AFA2" /db_xref="EcoGene:EG10646" /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGL QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA TIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE" gene 1147478..1148869 /gene="narK" /locus_tag="b1223" /gene_synonym="ECK1217" /gene_synonym="JW1214" /db_xref="EcoGene:EG10642" CDS 1147478..1148869 /gene="narK" /locus_tag="b1223" /gene_synonym="ECK1217" /gene_synonym="JW1214" /function="transport; Transport of small molecules: Anions" /note="nitrite extrusion protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="nitrate/nitrite transporter" /protein_id="AAC74307.1" /db_xref="GI:1787475" /db_xref="ASAP:ABE-0004111" /db_xref="UniProtKB/Swiss-Prot:P10903" /db_xref="EcoGene:EG10642" /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV VITWAVYGRHSKK" gene 1149385..1153128 /gene="narG" /locus_tag="b1224" /gene_synonym="chlC" /gene_synonym="ECK1218" /gene_synonym="JW1215" /gene_synonym="narC" /db_xref="EcoGene:EG10638" CDS 1149385..1153128 /gene="narG" /locus_tag="b1224" /gene_synonym="chlC" /gene_synonym="ECK1218" /gene_synonym="JW1215" /gene_synonym="narC" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase 1, alpha subunit" /protein_id="AAC74308.1" /db_xref="GI:1787477" /db_xref="ASAP:ABE-0004119" /db_xref="UniProtKB/Swiss-Prot:P09152" /db_xref="EcoGene:EG10638" /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGG KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALN FLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALT ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAH LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK" gene 1153125..1154663 /gene="narH" /locus_tag="b1225" /gene_synonym="chlC" /gene_synonym="ECK1219" /gene_synonym="JW1216" /db_xref="EcoGene:EG10639" CDS 1153125..1154663 /gene="narH" /locus_tag="b1225" /gene_synonym="chlC" /gene_synonym="ECK1219" /gene_synonym="JW1216" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 3053688" /note="nitrate reductase 1, beta subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase 1, beta (Fe-S) subunit" /protein_id="AAC74309.1" /db_xref="GI:1787478" /db_xref="ASAP:ABE-0004121" /db_xref="UniProtKB/Swiss-Prot:P11349" /db_xref="EcoGene:EG10639" /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD ADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT EPHP" gene 1154660..1155370 /gene="narJ" /locus_tag="b1226" /gene_synonym="ECK1220" /gene_synonym="JW1217" /db_xref="EcoGene:EG10641" CDS 1154660..1155370 /gene="narJ" /locus_tag="b1226" /gene_synonym="ECK1220" /gene_synonym="JW1217" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 2832376" /note="nitrate reductase 1, delta subunit, assembly function; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1" /protein_id="AAC74310.1" /db_xref="GI:1787479" /db_xref="ASAP:ABE-0004123" /db_xref="UniProtKB/Swiss-Prot:P0AF26" /db_xref="EcoGene:EG10641" /translation="MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALG IFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG LQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDL LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR FAGAVAPQYLNITTGGQH" gene 1155370..1156047 /gene="narI" /locus_tag="b1227" /gene_synonym="chlI" /gene_synonym="ECK1221" /gene_synonym="JW1218" /db_xref="EcoGene:EG10640" CDS 1155370..1156047 /gene="narI" /locus_tag="b1227" /gene_synonym="chlI" /gene_synonym="ECK1221" /gene_synonym="JW1218" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 3053688" /note="nitrate reductase 1, cytochrome b(NR), gamma subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="nitrate reductase 1, gamma (cytochrome b(NR)) subunit" /protein_id="AAC74311.1" /db_xref="GI:1787480" /db_xref="ASAP:ABE-0004125" /db_xref="UniProtKB/Swiss-Prot:P11350" /db_xref="EcoGene:EG10640" /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD RKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLIHIWSVPVEYLTRKY QLVRARH" repeat_region 1156115..1156186 /note="REP108 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1156587..1156757) /gene="rttR" /locus_tag="b4425" /gene_synonym="ECK1223" /gene_synonym="JWR0232" /gene_synonym="rtT" /gene_synonym="rtV1" /db_xref="EcoGene:EG31131" ncRNA complement(1156587..1156757) /ncRNA_class="other" /gene="rttR" /locus_tag="b4425" /gene_synonym="ECK1223" /gene_synonym="JWR0232" /gene_synonym="rtT" /gene_synonym="rtV1" /product="rtT sRNA, processed from tyrT transcript" /note="rtT RNA may modulate the stringent response; released from primary tyrT transcript during tRNA processing; encodes putative Tpr protein" /db_xref="ASAP:ABE-0047246" /db_xref="EcoGene:EG31131" gene complement(1156608..1156697) /gene="tpr" /locus_tag="b1229" /gene_synonym="ECK1224" /gene_synonym="JW1219" /db_xref="EcoGene:EG11016" CDS complement(1156608..1156697) /gene="tpr" /locus_tag="b1229" /gene_synonym="ECK1224" /gene_synonym="JW1219" /function="factor; Basic proteins - synthesis, modification" /note="a protamine-like protein; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="protamine-like protein" /protein_id="AAC74313.2" /db_xref="GI:145693121" /db_xref="ASAP:ABE-0004131" /db_xref="UniProtKB/Swiss-Prot:P02338" /db_xref="EcoGene:EG11016" /translation="MRSFDQGSTRAPARERCRRQRPEGRSAQR" gene complement(1156765..1156849) /gene="tyrV" /locus_tag="b1230" /gene_synonym="ECK1225" /gene_synonym="JWR0028" /gene_synonym="tyrTbeta" /db_xref="EcoGene:EG30108" tRNA complement(1156765..1156849) /gene="tyrV" /locus_tag="b1230" /gene_synonym="ECK1225" /gene_synonym="JWR0028" /gene_synonym="tyrTbeta" /product="tRNA-Tyr" /note="anticodon: GUA" /db_xref="ASAP:ABE-0004134" /db_xref="EcoGene:EG30108" gene complement(1157059..1157143) /gene="tyrT" /locus_tag="b1231" /gene_synonym="ECK1226" /gene_synonym="JWR0029" /gene_synonym="su" /gene_synonym="Su-3" /gene_synonym="Su-4" /gene_synonym="suIII" /gene_synonym="supC" /gene_synonym="supFsupO" /gene_synonym="tyrTalpha" /db_xref="EcoGene:EG30106" tRNA complement(1157059..1157143) /gene="tyrT" /locus_tag="b1231" /gene_synonym="ECK1226" /gene_synonym="JWR0029" /gene_synonym="su" /gene_synonym="Su-3" /gene_synonym="Su-4" /gene_synonym="suIII" /gene_synonym="supC" /gene_synonym="supFsupO" /gene_synonym="tyrTalpha" /product="tRNA-Tyr" /note="anticodon: GUA" /db_xref="ASAP:ABE-0004136" /db_xref="EcoGene:EG30106" gene complement(1157303..1158145) /gene="purU" /locus_tag="b1232" /gene_synonym="ECK1227" /gene_synonym="JW1220" /gene_synonym="tgs" /gene_synonym="ychI" /db_xref="EcoGene:EG11819" CDS complement(1157303..1158145) /gene="purU" /locus_tag="b1232" /gene_synonym="ECK1227" /gene_synonym="JW1220" /gene_synonym="tgs" /gene_synonym="ychI" /EC_number="3.5.1.10" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 8226647" /note="formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009152 - purine ribonucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate hydrolase" /protein_id="AAC74314.1" /db_xref="GI:1787483" /db_xref="ASAP:ABE-0004138" /db_xref="UniProtKB/Swiss-Prot:P37051" /db_xref="EcoGene:EG11819" /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQ PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR TIIL" gene complement(1158195..1158653) /gene="ychJ" /locus_tag="b1233" /gene_synonym="ECK1228" /gene_synonym="JW1221" /db_xref="EcoGene:EG12119" CDS complement(1158195..1158653) /gene="ychJ" /locus_tag="b1233" /gene_synonym="ECK1228" /gene_synonym="JW1221" /codon_start=1 /transl_table=11 /product="UPF0225 family protein" /protein_id="AAC74315.1" /db_xref="GI:1787484" /db_xref="ASAP:ABE-0004140" /db_xref="UniProtKB/Swiss-Prot:P37052" /db_xref="EcoGene:EG12119" /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ" gene 1158766..1159671 /gene="rssA" /locus_tag="b1234" /gene_synonym="ECK1229" /gene_synonym="JW1222" /gene_synonym="ychK" /db_xref="EcoGene:EG12120" CDS 1158766..1159671 /gene="rssA" /locus_tag="b1234" /gene_synonym="ECK1229" /gene_synonym="JW1222" /gene_synonym="ychK" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative patatin-like family phospholipase" /protein_id="AAC74316.2" /db_xref="GI:226510936" /db_xref="ASAP:ABE-0004144" /db_xref="UniProtKB/Swiss-Prot:P0AFR0" /db_xref="EcoGene:EG12120" /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEI ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLG SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH AAIAAGQLAVERKMDELLPLVRTNI" gene 1159763..1160776 /gene="rssB" /locus_tag="b1235" /gene_synonym="ECK1230" /gene_synonym="hnr" /gene_synonym="JW1223" /gene_synonym="mviA" /gene_synonym="sprE" /gene_synonym="verA" /gene_synonym="ychL" /db_xref="EcoGene:EG12121" CDS 1159763..1160776 /gene="rssB" /locus_tag="b1235" /gene_synonym="ECK1230" /gene_synonym="hnr" /gene_synonym="JW1223" /gene_synonym="mviA" /gene_synonym="sprE" /gene_synonym="verA" /gene_synonym="ychL" /function="regulator; Basic proteins - synthesis, modification" /note="Hnr protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="PcnB-degradosome interaction factor; response regulator" /protein_id="AAC74317.1" /db_xref="GI:1787487" /db_xref="ASAP:ABE-0004147" /db_xref="UniProtKB/Swiss-Prot:P0AEV1" /db_xref="EcoGene:EG12121" /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQEL QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML SAE" gene 1160978..1161886 /gene="galU" /locus_tag="b1236" /gene_synonym="ECK1231" /gene_synonym="JW1224" /gene_synonym="verA" /gene_synonym="ychD" /db_xref="EcoGene:EG11319" CDS 1160978..1161886 /gene="galU" /locus_tag="b1236" /gene_synonym="ECK1231" /gene_synonym="JW1224" /gene_synonym="verA" /gene_synonym="ychD" /EC_number="2.7.7.9" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0006012 - galactose metabolic process; GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate uridylyltransferase" /protein_id="AAC74318.1" /db_xref="GI:1787488" /db_xref="ASAP:ABE-0004150" /db_xref="UniProtKB/Swiss-Prot:P0AEP3" /db_xref="EcoGene:EG11319" /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD ETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF VEYGIRHNTLGTEFKAWLEEEMGIKK" gene complement(1162030..1162443) /gene="hns" /locus_tag="b1237" /gene_synonym="B1" /gene_synonym="bglY" /gene_synonym="cur" /gene_synonym="drc" /gene_synonym="drdX" /gene_synonym="drs" /gene_synonym="ECK1232" /gene_synonym="fimG" /gene_synonym="H1" /gene_synonym="hnsA" /gene_synonym="irk" /gene_synonym="JW1225" /gene_synonym="msyA" /gene_synonym="osmZ" /gene_synonym="pilG" /gene_synonym="topS" /gene_synonym="topX" /gene_synonym="verA" /gene_synonym="virR" /db_xref="EcoGene:EG10457" CDS complement(1162030..1162443) /gene="hns" /locus_tag="b1237" /gene_synonym="B1" /gene_synonym="bglY" /gene_synonym="cur" /gene_synonym="drc" /gene_synonym="drdX" /gene_synonym="drs" /gene_synonym="ECK1232" /gene_synonym="fimG" /gene_synonym="H1" /gene_synonym="hnsA" /gene_synonym="irk" /gene_synonym="JW1225" /gene_synonym="msyA" /gene_synonym="osmZ" /gene_synonym="pilG" /gene_synonym="topS" /gene_synonym="topX" /gene_synonym="verA" /gene_synonym="virR" /function="regulator; Basic proteins - synthesis, modification" /note="DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator; GO_component: GO:0019861 - flagellum; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="global DNA-binding transcriptional dual regulator H-NS" /protein_id="AAC74319.1" /db_xref="GI:1787489" /db_xref="ASAP:ABE-0004152" /db_xref="UniProtKB/Swiss-Prot:P0ACF8" /db_xref="EcoGene:EG10457" /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ" gene 1163048..1163665 /gene="tdk" /locus_tag="b1238" /gene_synonym="ECK1233" /gene_synonym="JW1226" /db_xref="EcoGene:EG10994" CDS 1163048..1163665 /gene="tdk" /locus_tag="b1238" /gene_synonym="ECK1233" /gene_synonym="JW1226" /EC_number="2.7.1.21" /function="enzyme; Salvage of nucleosides and nucleotides" /note="thymidine kinase; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="thymidine kinase/deoxyuridine kinase" /protein_id="AAC74320.1" /db_xref="GI:1787490" /db_xref="ASAP:ABE-0004157" /db_xref="UniProtKB/Swiss-Prot:P23331" /db_xref="EcoGene:EG10994" /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVDSLTAIQERHRHD" mobile_element complement(1163947..1164926) /mobile_element_type="insertion sequence:ISZ" gene complement(1163947..1164843) /gene="insZ" /locus_tag="b4573" /gene_synonym="ECK1234" /gene_synonym="JW1227" /gene_synonym="JW5883" /gene_synonym="ychG" /gene_synonym="ychR" /pseudo /db_xref="EcoGene:EG11611" CDS complement(join(1163947..1164513,1164513..1164662, 1164661..1164843)) /gene="insZ" /locus_tag="b4573" /gene_synonym="ECK1234" /gene_synonym="JW1227" /gene_synonym="JW5883" /gene_synonym="ychG" /gene_synonym="ychR" /note="pseudogene, transposase homolog" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004159" /db_xref="ASAP:ABE-0004161" /db_xref="ASAP:ABE-0285106" /db_xref="UniProtKB/Swiss-Prot:P30192" /db_xref="EcoGene:EG11611" gene complement(1164967..1167642) /gene="adhE" /locus_tag="b1241" /gene_synonym="adhC" /gene_synonym="ana" /gene_synonym="ECK1235" /gene_synonym="JW1228" /db_xref="EcoGene:EG10031" CDS complement(1164967..1167642) /gene="adhE" /locus_tag="b1241" /gene_synonym="adhC" /gene_synonym="ana" /gene_synonym="ECK1235" /gene_synonym="JW1228" /EC_number="1.1.1.1" /EC_number="1.2.1.10" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase" /protein_id="AAC74323.1" /db_xref="GI:1787493" /db_xref="ASAP:ABE-0004164" /db_xref="UniProtKB/Swiss-Prot:P0A9Q7" /db_xref="EcoGene:EG10031" /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA" gene 1168119..1168766 /gene="ychE" /locus_tag="b1242" /gene_synonym="ECK1236" /gene_synonym="JW1229" /db_xref="EcoGene:EG11342" CDS 1168119..1168766 /gene="ychE" /locus_tag="b1242" /gene_synonym="ECK1236" /gene_synonym="JW1229" /function="putative transport; Not classified" /note="putative channel protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0056 family inner membrane protein" /protein_id="AAC74324.1" /db_xref="GI:1787494" /db_xref="ASAP:ABE-0004168" /db_xref="UniProtKB/Swiss-Prot:P25743" /db_xref="EcoGene:EG11342" /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN" mobile_element 1169020..1170214 /mobile_element_type="insertion sequence:IS5U" gene 1170703..1172334 /gene="oppA" /locus_tag="b1243" /gene_synonym="ECK1237" /gene_synonym="JW1235" /db_xref="EcoGene:EG10674" CDS 1170703..1172334 /gene="oppA" /locus_tag="b1243" /gene_synonym="ECK1237" /gene_synonym="JW1235" /function="transport; Not classified" /note="oligopeptide transport; periplasmic binding protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0000270 - peptidoglycan metabolic process; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter periplasmic binding protein" /protein_id="AAC74325.1" /db_xref="GI:1787495" /db_xref="ASAP:ABE-0004172" /db_xref="UniProtKB/Swiss-Prot:P23843" /db_xref="EcoGene:EG10674" /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPI ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA QGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH" gene 1172420..1173340 /gene="oppB" /locus_tag="b1244" /gene_synonym="ECK1238" /gene_synonym="JW1236" /gene_synonym="stkB" /db_xref="EcoGene:EG10675" CDS 1172420..1173340 /gene="oppB" /locus_tag="b1244" /gene_synonym="ECK1238" /gene_synonym="JW1236" /gene_synonym="stkB" /function="transport; Not classified" /note="oligopeptide transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter permease" /protein_id="AAC74326.1" /db_xref="GI:1787497" /db_xref="ASAP:ABE-0004174" /db_xref="UniProtKB/Swiss-Prot:P0AFH2" /db_xref="EcoGene:EG10675" /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL SLTILVGALTILFNAIVDVLYAVIDPKIRY" gene 1173355..1174263 /gene="oppC" /locus_tag="b1245" /gene_synonym="ECK1239" /gene_synonym="JW1237" /gene_synonym="stkB" /db_xref="EcoGene:EG10676" CDS 1173355..1174263 /gene="oppC" /locus_tag="b1245" /gene_synonym="ECK1239" /gene_synonym="JW1237" /gene_synonym="stkB" /function="transport; Not classified" /note="homolog of Salmonella oligopeptide transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter permease" /protein_id="AAC74327.1" /db_xref="GI:1787498" /db_xref="ASAP:ABE-0004176" /db_xref="UniProtKB/Swiss-Prot:P0AFH6" /db_xref="EcoGene:EG10676" /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLI VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA GFLVVTLFCFNFIGDGLRDALDPKDR" gene 1174275..1175288 /gene="oppD" /locus_tag="b1246" /gene_synonym="ECK1240" /gene_synonym="JW1238" /db_xref="EcoGene:EG10677" CDS 1174275..1175288 /gene="oppD" /locus_tag="b1246" /gene_synonym="ECK1240" /gene_synonym="JW1238" /function="transport; Not classified" /note="homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter ATPase" /protein_id="AAT48129.1" /db_xref="GI:48994883" /db_xref="ASAP:ABE-0004178" /db_xref="UniProtKB/Swiss-Prot:P76027" /db_xref="EcoGene:EG10677" /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF NTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVE ELL" gene 1175285..1176289 /gene="oppF" /locus_tag="b1247" /gene_synonym="ECK1241" /gene_synonym="JW1239" /db_xref="EcoGene:EG10678" CDS 1175285..1176289 /gene="oppF" /locus_tag="b1247" /gene_synonym="ECK1241" /gene_synonym="JW1239" /function="putative transport; Not classified" /note="homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter ATPase" /protein_id="AAC74329.1" /db_xref="GI:1787500" /db_xref="ASAP:ABE-0004182" /db_xref="UniProtKB/Swiss-Prot:P77737" /db_xref="EcoGene:EG10678" /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSD IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHSVSCLKVDPL " gene complement(1176342..1176671) /gene="yciU" /locus_tag="b1248" /gene_synonym="ECK1242" /gene_synonym="JW1240" /db_xref="EcoGene:EG14256" CDS complement(1176342..1176671) /gene="yciU" /locus_tag="b1248" /gene_synonym="ECK1242" /gene_synonym="JW1240" /codon_start=1 /transl_table=11 /product="UPF0263 family protein" /protein_id="AAC74330.2" /db_xref="GI:87081860" /db_xref="ASAP:ABE-0004184" /db_xref="UniProtKB/Swiss-Prot:P0A8L7" /db_xref="EcoGene:EG14256" /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE RGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL CHIIWRE" gene complement(1176706..1178166) /gene="clsA" /locus_tag="b1249" /gene_synonym="cls" /gene_synonym="ECK1243" /gene_synonym="JW1241" /gene_synonym="nov" /gene_synonym="yciJ" /db_xref="EcoGene:EG11608" CDS complement(1176706..1178166) /gene="clsA" /locus_tag="b1249" /gene_synonym="cls" /gene_synonym="ECK1243" /gene_synonym="JW1241" /gene_synonym="nov" /gene_synonym="yciJ" /EC_number="2.7.8.-" /function="enzyme; Macromolecule synthesis: Phospholipids" /note="cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="cardiolipin synthase 1" /protein_id="AAC74331.1" /db_xref="GI:1787502" /db_xref="ASAP:ABE-0004186" /db_xref="UniProtKB/Swiss-Prot:P0A6H8" /db_xref="EcoGene:EG11608" /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL" gene 1178309..1178482 /gene="yciY" /locus_tag="b4595" /gene_synonym="ECK4405" /db_xref="EcoGene:EG14393" CDS 1178309..1178482 /gene="yciY" /locus_tag="b4595" /gene_synonym="ECK4405" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABP93442.1" /db_xref="GI:145693122" /db_xref="UniProtKB/Swiss-Prot:A5A613" /db_xref="EcoGene:EG14393" /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN KQRNSLLFAIYNI" gene complement(1178537..1179790) /gene="kch" /locus_tag="b1250" /gene_synonym="ECK1244" /gene_synonym="JW1242" /db_xref="EcoGene:EG11606" CDS complement(1178537..1179790) /gene="kch" /locus_tag="b1250" /gene_synonym="ECK1244" /gene_synonym="JW1242" /note="putative potassium channel protein (VIC family); GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0005244 - voltage-gated ion channel activity" /codon_start=1 /transl_table=11 /product="voltage-gated potassium channel" /protein_id="AAC74332.1" /db_xref="GI:1787503" /db_xref="ASAP:ABE-0004189" /db_xref="UniProtKB/Swiss-Prot:P31069" /db_xref="EcoGene:EG11606" /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKD MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL NSGHGIFSDNDELETKADSKESAQK" gene complement(1180090..1180386) /gene="yciI" /locus_tag="b1251" /gene_synonym="ECK1245" /gene_synonym="JW1243" /db_xref="EcoGene:EG11607" CDS complement(1180090..1180386) /gene="yciI" /locus_tag="b1251" /gene_synonym="ECK1245" /gene_synonym="JW1243" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /codon_start=1 /transl_table=11 /product="putative DGPF domain-containing enzyme" /protein_id="AAC74333.2" /db_xref="GI:87081861" /db_xref="ASAP:ABE-0004192" /db_xref="UniProtKB/Swiss-Prot:P0AB55" /db_xref="EcoGene:EG11607" /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF" gene 1180610..1181329 /gene="tonB" /locus_tag="b1252" /gene_synonym="ECK1246" /gene_synonym="exbA" /gene_synonym="JW5195" /gene_synonym="T1rec" /db_xref="EcoGene:EG11012" CDS 1180610..1181329 /gene="tonB" /locus_tag="b1252" /gene_synonym="ECK1246" /gene_synonym="exbA" /gene_synonym="JW5195" /gene_synonym="T1rec" /function="membrane; Transport of small molecules: Cations" /note="energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TonB-ExbB-ExbD transport complex" /protein_id="AAC74334.1" /db_xref="GI:1787505" /db_xref="ASAP:ABE-0004196" /db_xref="UniProtKB/Swiss-Prot:P02929" /db_xref="EcoGene:EG11012" /translation="MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQP ISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKP VKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQ PQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPG KPGSGIVVNILFKINGTTEIQ" gene complement(1181369..1181767) /gene="yciA" /locus_tag="b1253" /gene_synonym="ECK1247" /gene_synonym="JW1245" /db_xref="EcoGene:EG11121" CDS complement(1181369..1181767) /gene="yciA" /locus_tag="b1253" /gene_synonym="ECK1247" /gene_synonym="JW1245" /codon_start=1 /transl_table=11 /product="acyl-CoA esterase" /protein_id="AAC74335.1" /db_xref="GI:1787506" /db_xref="ASAP:ABE-0004198" /db_xref="UniProtKB/Swiss-Prot:P0A8Z0" /db_xref="EcoGene:EG11121" /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE PIGQRYKATEALFKYVAVDPEGKPRALPVE" gene complement(1181872..1182411) /gene="yciB" /locus_tag="b1254" /gene_synonym="ECK1248" /gene_synonym="ispA" /gene_synonym="ispZ" /gene_synonym="JW1246" /db_xref="EcoGene:EG11122" CDS complement(1181872..1182411) /gene="yciB" /locus_tag="b1254" /gene_synonym="ECK1248" /gene_synonym="ispA" /gene_synonym="ispZ" /gene_synonym="JW1246" /codon_start=1 /transl_table=11 /product="IspA family inner membrane protein" /protein_id="AAC74336.1" /db_xref="GI:1787507" /db_xref="ASAP:ABE-0004200" /db_xref="UniProtKB/Swiss-Prot:P0A710" /db_xref="EcoGene:EG11122" /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI FTLLSGIYIYRHMPQEDKS" gene complement(1182441..1183184) /gene="yciC" /locus_tag="b1255" /gene_synonym="ECK1249" /gene_synonym="JW1247" /db_xref="EcoGene:EG11123" CDS complement(1182441..1183184) /gene="yciC" /locus_tag="b1255" /gene_synonym="ECK1249" /gene_synonym="JW1247" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0259 family inner membrane protein" /protein_id="AAC74337.1" /db_xref="GI:1787508" /db_xref="ASAP:ABE-0004204" /db_xref="UniProtKB/Swiss-Prot:P21365" /db_xref="EcoGene:EG11123" /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL APVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI GAVLANTLSNLISAILLIYLFRLYMLIRQ" gene 1183541..1184179 /gene="ompW" /locus_tag="b1256" /gene_synonym="ECK1250" /gene_synonym="JW1248" /gene_synonym="yciD" /db_xref="EcoGene:EG11124" CDS 1183541..1184179 /gene="ompW" /locus_tag="b1256" /gene_synonym="ECK1250" /gene_synonym="JW1248" /gene_synonym="yciD" /function="putative membrane; Not classified" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane protein W" /protein_id="AAC74338.1" /db_xref="GI:1787510" /db_xref="ASAP:ABE-0004210" /db_xref="UniProtKB/Swiss-Prot:P0A915" /db_xref="EcoGene:EG11124" /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF" gene complement(1184239..1184745) /gene="yciE" /locus_tag="b1257" /gene_synonym="ECK1251" /gene_synonym="JW1249" /db_xref="EcoGene:EG11125" CDS complement(1184239..1184745) /gene="yciE" /locus_tag="b1257" /gene_synonym="ECK1251" /gene_synonym="JW1249" /experiment="N-terminus verified by Edman degradation: PMID 8455549" /codon_start=1 /transl_table=11 /product="putative rubrerythrin/ferritin-like metal-binding protein" /protein_id="AAC74339.1" /db_xref="GI:1787511" /db_xref="ASAP:ABE-0004212" /db_xref="UniProtKB/Swiss-Prot:P21363" /db_xref="EcoGene:EG11125" /translation="MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQ HLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYV FEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSE TDGVEAKK" gene complement(1184791..1185291) /gene="yciF" /locus_tag="b1258" /gene_synonym="ECK1252" /gene_synonym="JW1250" /db_xref="EcoGene:EG11126" CDS complement(1184791..1185291) /gene="yciF" /locus_tag="b1258" /gene_synonym="ECK1252" /gene_synonym="JW1250" /function="putative structure; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 8455549" /note="putative structural proteins" /codon_start=1 /transl_table=11 /product="putative rubrerythrin/ferritin-like metal-binding protein" /protein_id="AAC74340.1" /db_xref="GI:1787512" /db_xref="ASAP:ABE-0004222" /db_xref="UniProtKB/Swiss-Prot:P21362" /db_xref="EcoGene:EG11126" /translation="MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAF HAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAAL IAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNK KAENKA" gene complement(1185377..1185556) /gene="yciG" /locus_tag="b1259" /gene_synonym="ECK1253" /gene_synonym="JW1251" /db_xref="EcoGene:EG11127" CDS complement(1185377..1185556) /gene="yciG" /locus_tag="b1259" /gene_synonym="ECK1253" /gene_synonym="JW1251" /codon_start=1 /transl_table=11 /product="KGG family protein" /protein_id="AAC74341.2" /db_xref="GI:87081862" /db_xref="ASAP:ABE-0004229" /db_xref="UniProtKB/Swiss-Prot:P21361" /db_xref="EcoGene:EG11127" /translation="MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAG KKGGQQSGGNKSGKS" gene complement(1185937..1186743) /gene="trpA" /locus_tag="b1260" /gene_synonym="ECK1254" /gene_synonym="JW1252" /gene_synonym="try" /gene_synonym="tryp" /db_xref="EcoGene:EG11024" CDS complement(1185937..1186743) /gene="trpA" /locus_tag="b1260" /gene_synonym="ECK1254" /gene_synonym="JW1252" /gene_synonym="try" /gene_synonym="tryp" /EC_number="4.2.1.20" /function="enzyme; Amino acid biosynthesis: Tryptophan" /experiment="N-terminus verified by Edman degradation: PMID 388433,4863752,9298646" /note="tryptophan synthase, alpha protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="tryptophan synthase, alpha subunit" /protein_id="AAC74342.1" /db_xref="GI:1787514" /db_xref="ASAP:ABE-0004232" /db_xref="UniProtKB/Swiss-Prot:P0A877" /db_xref="EcoGene:EG11024" /translation="MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAG ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS" gene complement(1186743..1187936) /gene="trpB" /locus_tag="b1261" /gene_synonym="ECK1255" /gene_synonym="JW1253" /db_xref="EcoGene:EG11025" CDS complement(1186743..1187936) /gene="trpB" /locus_tag="b1261" /gene_synonym="ECK1255" /gene_synonym="JW1253" /EC_number="4.2.1.20" /function="enzyme; Amino acid biosynthesis: Tryptophan" /note="tryptophan synthase, beta protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="tryptophan synthase, beta subunit" /protein_id="AAC74343.1" /db_xref="GI:1787515" /db_xref="ASAP:ABE-0004234" /db_xref="UniProtKB/Swiss-Prot:P0A879" /db_xref="EcoGene:EG11025" /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILE REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE AFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILK ARGEI" gene complement(1187948..1189309) /gene="trpC" /locus_tag="b1262" /gene_synonym="ECK1256" /gene_synonym="JW1254" /gene_synonym="trpF" /db_xref="EcoGene:EG11026" CDS complement(1187948..1189309) /gene="trpC" /locus_tag="b1262" /gene_synonym="ECK1256" /gene_synonym="JW1254" /gene_synonym="trpF" /EC_number="4.1.1.48" /EC_number="5.3.1.24" /function="enzyme; Amino acid biosynthesis: Tryptophan" /note="N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase" /protein_id="AAC74344.3" /db_xref="GI:558094917" /db_xref="ASAP:ABE-0004238" /db_xref="UniProtKB/Swiss-Prot:P00909" /db_xref="EcoGene:EG11026" /translation="MMQTVLAKIVADKAIWVEARKQQQPLASFQNEVQPSTRHFYDAL QGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFNFLP IVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMG VLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAG AIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQL HGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDW SLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTL RAY" gene complement(1189310..1190905) /gene="trpD" /locus_tag="b1263" /gene_synonym="ECK1257" /gene_synonym="JW1255" /gene_synonym="trpGD" /db_xref="EcoGene:EG11027" CDS complement(1189310..1190905) /gene="trpD" /locus_tag="b1263" /gene_synonym="ECK1257" /gene_synonym="JW1255" /gene_synonym="trpGD" /EC_number="2.4.2.18" /EC_number="4.1.3.27" /function="enzyme; Amino acid biosynthesis: Tryptophan" /note="anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase" /protein_id="AAC74345.1" /db_xref="GI:1787517" /db_xref="ASAP:ABE-0004241" /db_xref="UniProtKB/Swiss-Prot:P00904" /db_xref="EcoGene:EG11027" /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQES HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA QTVLEVLRSGSAYDRVTALAARG" gene complement(1190905..1192467) /gene="trpE" /locus_tag="b1264" /gene_synonym="anth" /gene_synonym="ECK1258" /gene_synonym="JW1256" /gene_synonym="tryD" /gene_synonym="tryp-4" /db_xref="EcoGene:EG11028" CDS complement(1190905..1192467) /gene="trpE" /locus_tag="b1264" /gene_synonym="anth" /gene_synonym="ECK1258" /gene_synonym="JW1256" /gene_synonym="tryD" /gene_synonym="tryp-4" /EC_number="4.1.3.27" /function="enzyme; Amino acid biosynthesis: Tryptophan" /experiment="N-terminus verified by Edman degradation: PMID 4598537" /note="anthranilate synthase component I; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="component I of anthranilate synthase" /protein_id="AAC74346.1" /db_xref="GI:1787518" /db_xref="ASAP:ABE-0004244" /db_xref="UniProtKB/Swiss-Prot:P00895" /db_xref="EcoGene:EG11028" /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLALLDNALPAGVESEQSPNCRV LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED LPQLSAENNCPDFCFYLAETLMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQ LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPS PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGVVLDSVPQSEADETRNKARAVLR AIATAHHAQETF" gene complement(1192559..1192603) /gene="trpL" /locus_tag="b1265" /gene_synonym="ECK1259" /gene_synonym="JW1257" /gene_synonym="trpEE" /db_xref="EcoGene:EG11274" CDS complement(1192559..1192603) /gene="trpL" /locus_tag="b1265" /gene_synonym="ECK1259" /gene_synonym="JW1257" /gene_synonym="trpEE" /function="leader; Amino acid biosynthesis: Tryptophan" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="trp operon leader peptide" /protein_id="AAC74347.1" /db_xref="GI:1787519" /db_xref="ASAP:ABE-0004246" /db_xref="UniProtKB/Swiss-Prot:P0AD92" /db_xref="EcoGene:EG11274" /translation="MKAIFVLKGWWRTS" gene 1192741..1193622 /gene="yciV" /locus_tag="b1266" /gene_synonym="ECK1260" /gene_synonym="JW1258" /gene_synonym="trpH" /db_xref="EcoGene:EG14257" CDS 1192741..1193622 /gene="yciV" /locus_tag="b1266" /gene_synonym="ECK1260" /gene_synonym="JW1258" /gene_synonym="trpH" /function="putative enzyme; Not classified" /note="putative enzymes" /codon_start=1 /transl_table=11 /product="PHP domain protein" /protein_id="AAC74348.1" /db_xref="GI:1787520" /db_xref="ASAP:ABE-0004252" /db_xref="UniProtKB/Swiss-Prot:P77766" /db_xref="EcoGene:EG14257" /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ QTERRNQRAQLIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE HHGDAMEVAQCQQSPNERTQLAALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE GVWQLWEQPQNTTEREL" gene 1193619..1194239 /gene="yciO" /locus_tag="b1267" /gene_synonym="ECK1261" /gene_synonym="JW5196" /db_xref="EcoGene:EG12967" CDS 1193619..1194239 /gene="yciO" /locus_tag="b1267" /gene_synonym="ECK1261" /gene_synonym="JW5196" /codon_start=1 /transl_table=11 /product="putative RNA binding protein" /protein_id="AAC74349.2" /db_xref="GI:87081864" /db_xref="ASAP:ABE-0004254" /db_xref="UniProtKB/Swiss-Prot:P0AFR4" /db_xref="EcoGene:EG12967" /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL" gene 1194267..1196162 /gene="yciQ" /locus_tag="b1268" /gene_synonym="ECK1262" /gene_synonym="JW5197" /gene_synonym="yciP" /db_xref="EcoGene:EG12969" CDS 1194267..1196162 /gene="yciQ" /locus_tag="b1268" /gene_synonym="ECK1262" /gene_synonym="JW5197" /gene_synonym="yciP" /codon_start=1 /transl_table=11 /product="enhancer of membrane protein expression; putative inner membrane protein" /protein_id="AAC74350.1" /db_xref="GI:1787522" /db_xref="ASAP:ABE-0004256" /db_xref="UniProtKB/Swiss-Prot:P45848" /db_xref="EcoGene:EG12969" /translation="MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATL QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL YRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRV NEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSF YRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR DDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGM GYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG GGGGGGW" gene 1196373..1197248 /gene="rluB" /locus_tag="b1269" /gene_synonym="ECK1263" /gene_synonym="JW1261" /gene_synonym="yciL" /db_xref="EcoGene:EG12433" CDS 1196373..1197248 /gene="rluB" /locus_tag="b1269" /gene_synonym="ECK1263" /gene_synonym="JW1261" /gene_synonym="yciL" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine(2605) synthase" /protein_id="AAC74351.1" /db_xref="GI:1787524" /db_xref="ASAP:ABE-0004259" /db_xref="UniProtKB/Swiss-Prot:P37765" /db_xref="EcoGene:EG12433" /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS QVSGGRRSGGRNNNG" repeat_region 1197258..1197276 /note="REP109 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1197288..1197878) /gene="btuR" /locus_tag="b1270" /gene_synonym="cobA" /gene_synonym="ECK1264" /gene_synonym="JW1262" /db_xref="EcoGene:EG10130" CDS complement(1197288..1197878) /gene="btuR" /locus_tag="b1270" /gene_synonym="cobA" /gene_synonym="ECK1264" /gene_synonym="JW1262" /EC_number="2.5.1.-" /EC_number="2.5.1.17" /function="enzyme; Biosynthesis of cofactors, carriers: Cobalamin" /note="cob(I)alamin adenolsyltransferase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="cob(I)yrinic acid a,c-diamide adenosyltransferase" /protein_id="AAC74352.1" /db_xref="GI:1787525" /db_xref="ASAP:ABE-0004261" /db_xref="UniProtKB/Swiss-Prot:P0A9H5" /db_xref="EcoGene:EG10130" /translation="MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTA AFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDT AACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITG RGCHRDILELADTVSELRPVKHAFDAGVKAQIGIDY" gene complement(1197875..1198633) /gene="yciK" /locus_tag="b1271" /gene_synonym="ECK1265" /gene_synonym="JW1263" /db_xref="EcoGene:EG11759" CDS complement(1197875..1198633) /gene="yciK" /locus_tag="b1271" /gene_synonym="ECK1265" /gene_synonym="JW1263" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase" /protein_id="AAC74353.1" /db_xref="GI:1787526" /db_xref="ASAP:ABE-0004263" /db_xref="UniProtKB/Swiss-Prot:P31808" /db_xref="EcoGene:EG11759" /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL LGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ" gene 1198853..1199902 /gene="sohB" /locus_tag="b1272" /gene_synonym="ECK1266" /gene_synonym="JW1264" /db_xref="EcoGene:EG10956" CDS 1198853..1199902 /gene="sohB" /locus_tag="b1272" /gene_synonym="ECK1266" /gene_synonym="JW1264" /function="putative enzyme; Not classified" /note="putative protease" /codon_start=1 /transl_table=11 /product="inner membrane protein, S49 peptidase family protein" /protein_id="AAC74354.1" /db_xref="GI:1787527" /db_xref="ASAP:ABE-0004267" /db_xref="UniProtKB/Swiss-Prot:P0AG14" /db_xref="EcoGene:EG10956" /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV NNLSEQYKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKD IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD RLLLRWWQRGQKPLM" gene complement(1199938..1200189) /gene="yciN" /locus_tag="b1273" /gene_synonym="ECK1267" /gene_synonym="JW1265" /db_xref="EcoGene:EG12868" CDS complement(1199938..1200189) /gene="yciN" /locus_tag="b1273" /gene_synonym="ECK1267" /gene_synonym="JW1265" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /codon_start=1 /transl_table=11 /product="DUF2498 protein YciN" /protein_id="AAC74355.1" /db_xref="GI:1787528" /db_xref="ASAP:ABE-0004269" /db_xref="UniProtKB/Swiss-Prot:P0AB61" /db_xref="EcoGene:EG12868" /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD" gene 1200569..1203166 /gene="topA" /locus_tag="b1274" /gene_synonym="asuA?" /gene_synonym="ECK1268" /gene_synonym="JW1266" /gene_synonym="supX" /db_xref="EcoGene:EG11013" CDS 1200569..1203166 /gene="topA" /locus_tag="b1274" /gene_synonym="asuA?" /gene_synonym="ECK1268" /gene_synonym="JW1266" /gene_synonym="supX" /EC_number="5.99.1.2" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA topoisomerase type I, omega protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I, omega subunit" /protein_id="AAC74356.1" /db_xref="GI:1787529" /db_xref="ASAP:ABE-0004275" /db_xref="UniProtKB/Swiss-Prot:P06612" /db_xref="EcoGene:EG11013" /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV DGKWVEGKK" gene 1203376..1204350 /gene="cysB" /locus_tag="b1275" /gene_synonym="ECK1269" /gene_synonym="JW1267" /db_xref="EcoGene:EG10184" CDS 1203376..1204350 /gene="cysB" /locus_tag="b1275" /gene_synonym="ECK1269" /gene_synonym="JW1267" /function="transport; Amino acid biosynthesis: Cysteine" /experiment="N-terminus verified by Edman degradation: PMID 2182030" /note="positive transcriptional regulator for cysteine regulon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0019344 - cysteine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor" /protein_id="AAC74357.1" /db_xref="GI:1787530" /db_xref="ASAP:ABE-0004279" /db_xref="UniProtKB/Swiss-Prot:P0A9F3" /db_xref="EcoGene:EG10184" /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK" gene 1204645..1204809 /gene="ymiA" /locus_tag="b4522" /gene_synonym="ECK4433" /db_xref="EcoGene:EG14463" CDS 1204645..1204809 /gene="ymiA" /locus_tag="b4522" /gene_synonym="ECK4433" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18655.2" /db_xref="GI:558094918" /db_xref="UniProtKB/Swiss-Prot:P0CB62" /db_xref="EcoGene:EG14463" /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV VALLIWKVWG" gene 1204812..1204979 /gene="yciX" /locus_tag="b4523" /gene_synonym="ECK1270" /gene_synonym="JW5198" /gene_synonym="JW5199" /db_xref="EcoGene:EG14351" CDS 1204812..1204979 /gene="yciX" /locus_tag="b4523" /gene_synonym="ECK1270" /gene_synonym="JW5198" /gene_synonym="JW5199" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18656.2" /db_xref="GI:145693123" /db_xref="ASAP:ABE-0285043" /db_xref="ASAP:ABE-0285044" /db_xref="ASAP:ABE-0285107" /db_xref="UniProtKB/Swiss-Prot:P58094" /db_xref="EcoGene:EG14351" /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI ELFAEDDQPKQ" gene 1205352..1208027 /gene="acnA" /locus_tag="b1276" /gene_synonym="acn" /gene_synonym="ECK1271" /gene_synonym="JW1268" /db_xref="EcoGene:EG11325" CDS 1205352..1208027 /gene="acnA" /locus_tag="b1276" /gene_synonym="acn" /gene_synonym="ECK1271" /gene_synonym="JW1268" /EC_number="4.2.1.3" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="aconitate hydrase 1; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="aconitate hydratase 1; aconitase A" /protein_id="AAC74358.1" /db_xref="GI:1787531" /db_xref="ASAP:ABE-0004283" /db_xref="UniProtKB/Swiss-Prot:P25516" /db_xref="EcoGene:EG11325" /translation="MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKV LLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAA MREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFL KWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMI NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSE DQVELVEKYAKAQGMWRNPGDEPIFTSTLELDMNDVEASLAGPKRPQDRVALPDVPKA FAASNELEVNATHKDRQPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLL AKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNS GPLPDPIETAIKKSDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNI NLASEPIGHDRKGDPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKGIN VTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGS IKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTR HLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESF ERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADG SQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK" gene complement(1208091..1208681) /gene="ribA" /locus_tag="b1277" /gene_synonym="ECK1272" /gene_synonym="JW1269" /db_xref="EcoGene:EG11331" CDS complement(1208091..1208681) /gene="ribA" /locus_tag="b1277" /gene_synonym="ECK1272" /gene_synonym="JW1269" /EC_number="3.5.4.25" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /experiment="N-terminus verified by Edman degradation: PMID 8320220" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase II" /protein_id="AAC74359.1" /db_xref="GI:1787533" /db_xref="ASAP:ABE-0004285" /db_xref="UniProtKB/Swiss-Prot:P0A7I7" /db_xref="EcoGene:EG11331" /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK" gene 1208851..1209615 /gene="pgpB" /locus_tag="b1278" /gene_synonym="ECK1273" /gene_synonym="JW1270" /db_xref="EcoGene:EG10705" CDS 1208851..1209615 /gene="pgpB" /locus_tag="b1278" /gene_synonym="ECK1273" /gene_synonym="JW1270" /EC_number="3.1.3.27" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /note="non-essential phosphatidylglycerophosphate phosphatase, membrane bound; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase B" /protein_id="AAC74360.1" /db_xref="GI:1787534" /db_xref="ASAP:ABE-0004294" /db_xref="UniProtKB/Swiss-Prot:P0A924" /db_xref="EcoGene:EG10705" /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP SGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLI SWALVAVATWLAQRICGPLTPPAEENREIAQREQES" gene 1209764..1210072 /gene="yciS" /locus_tag="b1279" /gene_synonym="ECK1274" /gene_synonym="JW1271" /gene_synonym="lapA" /db_xref="EcoGene:EG13904" CDS 1209764..1210072 /gene="yciS" /locus_tag="b1279" /gene_synonym="ECK1274" /gene_synonym="JW1271" /gene_synonym="lapA" /codon_start=1 /transl_table=11 /product="DUF1049 family inner membrane protein, function unknown" /protein_id="AAC74361.1" /db_xref="GI:1787535" /db_xref="ASAP:ABE-0004298" /db_xref="UniProtKB/Swiss-Prot:P0ACV4" /db_xref="EcoGene:EG13904" /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE " gene 1210079..1211248 /gene="yciM" /locus_tag="b1280" /gene_synonym="ECK1275" /gene_synonym="JW1272" /gene_synonym="lapB" /db_xref="EcoGene:EG12691" CDS 1210079..1211248 /gene="yciM" /locus_tag="b1280" /gene_synonym="ECK1275" /gene_synonym="JW1272" /gene_synonym="lapB" /function="putative factor; Not classified" /note="putative heat shock protein" /codon_start=1 /transl_table=11 /product="LPS regulatory protein; putative modulator of LpxC proteolysis" /protein_id="AAC74362.1" /db_xref="GI:2367116" /db_xref="ASAP:ABE-0004300" /db_xref="UniProtKB/Swiss-Prot:P0AB58" /db_xref="EcoGene:EG12691" /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSI MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL" gene 1211442..1212179 /gene="pyrF" /locus_tag="b1281" /gene_synonym="ECK1276" /gene_synonym="JW1273" /db_xref="EcoGene:EG10809" CDS 1211442..1212179 /gene="pyrF" /locus_tag="b1281" /gene_synonym="ECK1276" /gene_synonym="JW1273" /EC_number="4.1.1.23" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="orotidine-5'-phosphate decarboxylase" /protein_id="AAC74363.1" /db_xref="GI:1787537" /db_xref="ASAP:ABE-0004304" /db_xref="UniProtKB/Swiss-Prot:P08244" /db_xref="EcoGene:EG10809" /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLK VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQK CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYM VIGRPVTQSVDPAQTLKAINASLQRSA" gene 1212179..1212505 /gene="yciH" /locus_tag="b1282" /gene_synonym="ECK1277" /gene_synonym="JW1274" /db_xref="EcoGene:EG11128" CDS 1212179..1212505 /gene="yciH" /locus_tag="b1282" /gene_synonym="ECK1277" /gene_synonym="JW1274" /codon_start=1 /transl_table=11 /product="initiation factor function partial mimic, SUI1 family" /protein_id="AAC74364.2" /db_xref="GI:87081867" /db_xref="ASAP:ABE-0004307" /db_xref="UniProtKB/Swiss-Prot:P08245" /db_xref="EcoGene:EG11128" /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG KGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK VKLAGG" gene complement(1212631..1212849) /gene="osmB" /locus_tag="b1283" /gene_synonym="ECK1278" /gene_synonym="JW1275" /db_xref="EcoGene:EG10679" CDS complement(1212631..1212849) /gene="osmB" /locus_tag="b1283" /gene_synonym="ECK1278" /gene_synonym="JW1275" /function="putative membrane; Osmotic adaptation" /note="osmotically inducible lipoprotein; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="osmotically and stress inducible lipoprotein" /protein_id="AAC74365.1" /db_xref="GI:1787539" /db_xref="ASAP:ABE-0004309" /db_xref="UniProtKB/Swiss-Prot:P0ADA7" /db_xref="EcoGene:EG10679" /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG GAVLTDGSTLGTLGGAAVGGVIGHQVGK" gene complement(1213118..1213867) /gene="yciT" /locus_tag="b1284" /gene_synonym="deoT" /gene_synonym="ECK1279" /gene_synonym="JW1276" /db_xref="EcoGene:EG13905" CDS complement(1213118..1213867) /gene="yciT" /locus_tag="b1284" /gene_synonym="deoT" /gene_synonym="ECK1279" /gene_synonym="JW1276" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="global regulator of transcription; DeoR family" /protein_id="AAC74366.1" /db_xref="GI:1787540" /db_xref="ASAP:ABE-0004312" /db_xref="UniProtKB/Swiss-Prot:P76034" /db_xref="EcoGene:EG13905" /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVE RFNRVITDSKIRASDLMHLEHSKLTIHVVDI" gene complement(1213957..1214130) /gene="yciZ" /locus_tag="b4596" /gene_synonym="deoL" /gene_synonym="ECK4406" /db_xref="EcoGene:EG14460" CDS complement(1213957..1214130) /gene="yciZ" /locus_tag="b4596" /gene_synonym="deoL" /gene_synonym="ECK4406" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABP93443.1" /db_xref="GI:145693124" /db_xref="UniProtKB/Swiss-Prot:A5A614" /db_xref="EcoGene:EG14460" /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA ESTPDIPKAPWEI" gene complement(1214278..1216263) /gene="gmr" /locus_tag="b1285" /gene_synonym="ECK1280" /gene_synonym="JW1278" /gene_synonym="yciR" /db_xref="EcoGene:EG13415" CDS complement(1214278..1216263) /gene="gmr" /locus_tag="b1285" /gene_synonym="ECK1280" /gene_synonym="JW1278" /gene_synonym="yciR" /codon_start=1 /transl_table=11 /product="cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability" /protein_id="AAC74367.1" /db_xref="GI:1787541" /db_xref="ASAP:ABE-0004317" /db_xref="UniProtKB/Swiss-Prot:P77334" /db_xref="EcoGene:EG13415" /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA" gene 1216317..1216421 /gene="ymiB" /locus_tag="b4672" /gene_synonym="ECK4487" /db_xref="EcoGene:EG14477" CDS 1216317..1216421 /gene="ymiB" /locus_tag="b4672" /gene_synonym="ECK4487" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO59991.1" /db_xref="GI:226510937" /db_xref="UniProtKB/Swiss-Prot:C1P5Z9" /db_xref="EcoGene:EG14477" /translation="MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS" gene complement(1216499..1218433) /gene="rnb" /locus_tag="b1286" /gene_synonym="ECK1281" /gene_synonym="JW1279" /db_xref="EcoGene:EG11620" CDS complement(1216499..1218433) /gene="rnb" /locus_tag="b1286" /gene_synonym="ECK1281" /gene_synonym="JW1279" /EC_number="3.1.13.1" /function="enzyme; Degradation of RNA" /note="RNase II, mRNA degradation; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="ribonuclease II" /protein_id="AAC74368.1" /db_xref="GI:1787542" /db_xref="ASAP:ABE-0004320" /db_xref="UniProtKB/Swiss-Prot:P30850" /db_xref="EcoGene:EG11620" /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN EVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA EIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVI DVTIAEVRMETRSIIARPVA" gene complement(1218501..1219628) /gene="yciW" /locus_tag="b1287" /gene_synonym="ECK1282" /gene_synonym="JW5200" /db_xref="EcoGene:EG14262" CDS complement(1218501..1219628) /gene="yciW" /locus_tag="b1287" /gene_synonym="ECK1282" /gene_synonym="JW5200" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74369.2" /db_xref="GI:87081868" /db_xref="ASAP:ABE-0004322" /db_xref="UniProtKB/Swiss-Prot:P76035" /db_xref="EcoGene:EG14262" /translation="MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVI LEKETLAPFLSWLDPARVLAVDLFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC NYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC VIISQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEV EKLPEEHTKSSTAELCQLAEILSLHPISLSLLEKLLNSTRGNTQPDNQLAALLCARIN GSPACFATCMDSSNEYKKISTLMRKGENEINQWADRHSVERATVQAIQWLTRAPDRFS AAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY" gene complement(1219772..1220560) /gene="fabI" /locus_tag="b1288" /gene_synonym="ECK1283" /gene_synonym="envM" /gene_synonym="gts" /gene_synonym="JW1281" /gene_synonym="qmeA" /db_xref="EcoGene:EG11528" CDS complement(1219772..1220560) /gene="fabI" /locus_tag="b1288" /gene_synonym="ECK1283" /gene_synonym="envM" /gene_synonym="gts" /gene_synonym="JW1281" /gene_synonym="qmeA" /EC_number="1.3.1.9" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="enoyl-[acyl-carrier-protein] reductase (NADH); GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="enoyl-[acyl-carrier-protein] reductase, NADH-dependent" /protein_id="AAC74370.1" /db_xref="GI:1787545" /db_xref="ASAP:ABE-0004327" /db_xref="UniProtKB/Swiss-Prot:P0AEK4" /db_xref="EcoGene:EG11528" /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK" gene complement(1220928..1221281) /gene="ycjD" /locus_tag="b1289" /gene_synonym="ECK1284" /gene_synonym="JW1282" /db_xref="EcoGene:EG12653" CDS complement(1220928..1221281) /gene="ycjD" /locus_tag="b1289" /gene_synonym="ECK1284" /gene_synonym="JW1282" /codon_start=1 /transl_table=11 /product="DUF559 family endonuclease-related protein" /protein_id="AAC74371.1" /db_xref="GI:1787546" /db_xref="ASAP:ABE-0004333" /db_xref="UniProtKB/Swiss-Prot:P45736" /db_xref="EcoGene:EG12653" /translation="MIDKIKSNARDLRRNLTLQERKLWRYLRSRRFSDFKFRRQHPVG SYILDFACCSARVVVELDGGQHDLAVAYDSRRTSWLESQGWTVLRFWNNEIDCNEETV LENILQELNRRSPSP" gene complement(1221349..1222155) /gene="sapF" /locus_tag="b1290" /gene_synonym="ECK1285" /gene_synonym="JW1283" /db_xref="EcoGene:EG12305" CDS complement(1221349..1222155) /gene="sapF" /locus_tag="b1290" /gene_synonym="ECK1285" /gene_synonym="JW1283" /function="putative transport; Not classified" /note="putative ATP-binding protein of peptide transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter ATPase" /protein_id="AAC74372.1" /db_xref="GI:1787547" /db_xref="ASAP:ABE-0004339" /db_xref="UniProtKB/Swiss-Prot:P0AAH8" /db_xref="EcoGene:EG12305" /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR" gene complement(1222157..1223149) /gene="sapD" /locus_tag="b1291" /gene_synonym="ECK1286" /gene_synonym="JW1284" /gene_synonym="trkE" /db_xref="EcoGene:EG12304" CDS complement(1222157..1223149) /gene="sapD" /locus_tag="b1291" /gene_synonym="ECK1286" /gene_synonym="JW1284" /gene_synonym="trkE" /function="putative transport; Not classified" /note="putative ATP-binding protein of peptide transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="antimicrobial peptide ABC transporter ATPase" /protein_id="AAC74373.1" /db_xref="GI:1787548" /db_xref="ASAP:ABE-0004342" /db_xref="UniProtKB/Swiss-Prot:P0AAH4" /db_xref="EcoGene:EG12304" /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE" gene complement(1223149..1224039) /gene="sapC" /locus_tag="b1292" /gene_synonym="ECK1287" /gene_synonym="JW1285" /db_xref="EcoGene:EG20256" CDS complement(1223149..1224039) /gene="sapC" /locus_tag="b1292" /gene_synonym="ECK1287" /gene_synonym="JW1285" /function="putative transport; Not classified" /note="homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="antimicrobial peptide transport ABC transporter permease" /protein_id="AAC74374.1" /db_xref="GI:1787549" /db_xref="ASAP:ABE-0004348" /db_xref="UniProtKB/Swiss-Prot:P0AGH5" /db_xref="EcoGene:EG20256" /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS VLLVNLLGDGVRRAIIAGVE" gene complement(1224026..1224991) /gene="sapB" /locus_tag="b1293" /gene_synonym="ECK1288" /gene_synonym="JW1286" /db_xref="EcoGene:EG20255" CDS complement(1224026..1224991) /gene="sapB" /locus_tag="b1293" /gene_synonym="ECK1288" /gene_synonym="JW1286" /function="putative transport; Not classified" /note="homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="antimicrobial peptide transport ABC transporter permease" /protein_id="AAC74375.1" /db_xref="GI:1787550" /db_xref="ASAP:ABE-0004350" /db_xref="UniProtKB/Swiss-Prot:P0AGH3" /db_xref="EcoGene:EG20255" /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR" gene complement(1224988..1226631) /gene="sapA" /locus_tag="b1294" /gene_synonym="ECK1289" /gene_synonym="JW1287" /db_xref="EcoGene:EG20254" CDS complement(1224988..1226631) /gene="sapA" /locus_tag="b1294" /gene_synonym="ECK1289" /gene_synonym="JW1287" /function="putative transport; Not classified" /note="homolog of Salmonella peptide transport periplasmic protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="antimicrobial peptide transport ABC transporter periplasmic binding protein" /protein_id="AAC74376.1" /db_xref="GI:1787551" /db_xref="ASAP:ABE-0004354" /db_xref="UniProtKB/Swiss-Prot:Q47622" /db_xref="EcoGene:EG20254" /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG TAETAASILPRASWAYDNEAKITEYNPAKSREQLKSLGLENLTLKLWVPTRSQAWNPS PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP" repeat_region 1226880..1226913 /note="REP110 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1226944..1227189) /gene="ymjA" /locus_tag="b1295" /gene_synonym="ECK1290" /gene_synonym="JW1288" /db_xref="EcoGene:EG14295" CDS complement(1226944..1227189) /gene="ymjA" /locus_tag="b1295" /gene_synonym="ECK1290" /gene_synonym="JW1288" /codon_start=1 /transl_table=11 /product="DUF2543 family protein" /protein_id="AAC74377.1" /db_xref="GI:1787552" /db_xref="ASAP:ABE-0004359" /db_xref="UniProtKB/Swiss-Prot:P0ACV8" /db_xref="EcoGene:EG14295" /translation="MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLM NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE" repeat_region 1227291..1227320 /note="REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1227323..1228708) /gene="puuP" /locus_tag="b1296" /gene_synonym="ECK1291" /gene_synonym="JW1289" /gene_synonym="ycjJ" /db_xref="EcoGene:EG13907" CDS complement(1227323..1228708) /gene="puuP" /locus_tag="b1296" /gene_synonym="ECK1291" /gene_synonym="JW1289" /gene_synonym="ycjJ" /function="transport; Degradation of small molecules: Carbon compounds" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putrescine importer" /protein_id="AAC74378.2" /db_xref="GI:87081869" /db_xref="ASAP:ABE-0004362" /db_xref="UniProtKB/Swiss-Prot:P76037" /db_xref="EcoGene:EG13907" /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL YDGDRTPVSET" gene complement(1229011..1230429) /gene="puuA" /locus_tag="b1297" /gene_synonym="ECK1292" /gene_synonym="JW5201" /gene_synonym="ycjK" /db_xref="EcoGene:EG13908" CDS complement(1229011..1230429) /gene="puuA" /locus_tag="b1297" /gene_synonym="ECK1292" /gene_synonym="JW5201" /gene_synonym="ycjK" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="putative glutamine synthetase; GO_process: GO:0006542 - glutamine biosynthetic process; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="glutamate--putrescine ligase" /protein_id="AAC74379.2" /db_xref="GI:87081870" /db_xref="ASAP:ABE-0004365" /db_xref="UniProtKB/Swiss-Prot:P78061" /db_xref="EcoGene:EG13908" /translation="METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLL TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP ADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEH AGSGMHIHISMQNNRGENVLSDAEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN DELLQFERLITETEIEWMLKNA" gene 1230641..1231405 /gene="puuD" /locus_tag="b1298" /gene_synonym="ECK1293" /gene_synonym="JW1291" /gene_synonym="ycjL" /db_xref="EcoGene:EG13909" CDS 1230641..1231405 /gene="puuD" /locus_tag="b1298" /gene_synonym="ECK1293" /gene_synonym="JW1291" /gene_synonym="ycjL" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 15590624" /note="probable amidotransferase subunit; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="gamma-glutamyl-gamma-aminobutyrate hydrolase" /protein_id="AAC74380.2" /db_xref="GI:87081871" /db_xref="ASAP:ABE-0004369" /db_xref="UniProtKB/Swiss-Prot:P76038" /db_xref="EcoGene:EG13909" /translation="MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIA LPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINA ALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQ VEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALG VQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL" gene 1231432..1231989 /gene="puuR" /locus_tag="b1299" /gene_synonym="ECK1294" /gene_synonym="JW1292" /gene_synonym="ycjC" /db_xref="EcoGene:EG12431" CDS 1231432..1231989 /gene="puuR" /locus_tag="b1299" /gene_synonym="ECK1294" /gene_synonym="JW1292" /gene_synonym="ycjC" /function="regulator; Degradation of small molecules: Carbon compounds" /codon_start=1 /transl_table=11 /product="repressor for the divergent puu operons, putrescine inducible" /protein_id="AAC74381.1" /db_xref="GI:1787557" /db_xref="ASAP:ABE-0004371" /db_xref="UniProtKB/Swiss-Prot:P0A9U6" /db_xref="EcoGene:EG12431" /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT GIPHSFSNTSAGICRIISAHTPTTF" gene 1232264..1233751 /gene="puuC" /locus_tag="b1300" /gene_synonym="aldH" /gene_synonym="ECK1295" /gene_synonym="JW1293" /db_xref="EcoGene:EG10036" CDS 1232264..1233751 /gene="puuC" /locus_tag="b1300" /gene_synonym="aldH" /gene_synonym="ECK1295" /gene_synonym="JW1293" /EC_number="1.2.1.3" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="aldehyde dehydrogenase, prefers NADP over NAD; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase" /protein_id="AAC74382.1" /db_xref="GI:1787558" /db_xref="ASAP:ABE-0004376" /db_xref="UniProtKB/Swiss-Prot:P23883" /db_xref="EcoGene:EG10036" /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT QAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV FADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP LDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA" gene 1233753..1235033 /gene="puuB" /locus_tag="b1301" /gene_synonym="ECK1296" /gene_synonym="JW1294" /gene_synonym="ordL" /gene_synonym="ycjA" /db_xref="EcoGene:EG11822" CDS 1233753..1235033 /gene="puuB" /locus_tag="b1301" /gene_synonym="ECK1296" /gene_synonym="JW1294" /gene_synonym="ordL" /gene_synonym="ycjA" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="probable oxidoreductase" /codon_start=1 /transl_table=11 /product="gamma-glutamylputrescine oxidoreductase" /protein_id="AAC74383.1" /db_xref="GI:1787559" /db_xref="ASAP:ABE-0004378" /db_xref="UniProtKB/Swiss-Prot:P37906" /db_xref="EcoGene:EG11822" /translation="MTEHTSSYYAASANKYAPFDTLNESITCDVCVVGGGYTGLSSAL HLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFE GGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAI RREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVV RTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNY CVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDY RWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAF ANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV" gene 1235071..1236336 /gene="puuE" /locus_tag="b1302" /gene_synonym="ECK1297" /gene_synonym="goaG" /gene_synonym="JW1295" /db_xref="EcoGene:EG13187" CDS 1235071..1236336 /gene="puuE" /locus_tag="b1302" /gene_synonym="ECK1297" /gene_synonym="goaG" /gene_synonym="JW1295" /EC_number="2.6.1.19" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="4-aminobutyrate aminotransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="4-aminobutyrate aminotransferase, PLP-dependent" /protein_id="AAC74384.1" /db_xref="GI:1787560" /db_xref="ASAP:ABE-0004380" /db_xref="UniProtKB/Swiss-Prot:P50457" /db_xref="EcoGene:EG13187" /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL IDAKESVPAIAAVRGLGSMIAVEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG NVIRFLYPLTIPDAQFDAAMKILQDALSD" repeat_region 1236354..1236434 /note="RIP112 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1236456..1237433) /gene="pspF" /locus_tag="b1303" /gene_synonym="ECK1298" /gene_synonym="JW1296" /gene_synonym="ycjB" /db_xref="EcoGene:EG12344" CDS complement(1236456..1237433) /gene="pspF" /locus_tag="b1303" /gene_synonym="ECK1298" /gene_synonym="JW1296" /gene_synonym="ycjB" /function="regulator; Phage-related functions and prophages" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="psp operon transcriptional activator" /protein_id="AAC74385.2" /db_xref="GI:87081872" /db_xref="ASAP:ABE-0004383" /db_xref="UniProtKB/Swiss-Prot:P37344" /db_xref="EcoGene:EG12344" /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGT FRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLL NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI" gene 1237600..1238268 /gene="pspA" /locus_tag="b1304" /gene_synonym="cog" /gene_synonym="ECK1299" /gene_synonym="JW1297" /db_xref="EcoGene:EG10776" CDS 1237600..1238268 /gene="pspA" /locus_tag="b1304" /gene_synonym="cog" /gene_synonym="ECK1299" /gene_synonym="JW1297" /function="factor; Phage-related functions and prophages" /note="phage shock protein, inner membrane protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="regulatory protein for phage-shock-protein operon" /protein_id="AAC74386.1" /db_xref="GI:2367118" /db_xref="ASAP:ABE-0004387" /db_xref="UniProtKB/Swiss-Prot:P0AFM6" /db_xref="EcoGene:EG10776" /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK SLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK QDNQ" gene 1238322..1238546 /gene="pspB" /locus_tag="b1305" /gene_synonym="ECK1300" /gene_synonym="JW1298" /db_xref="EcoGene:EG10777" CDS 1238322..1238546 /gene="pspB" /locus_tag="b1305" /gene_synonym="ECK1300" /gene_synonym="JW1298" /function="IS, phage, Tn; Phage-related functions and prophages" /note="phage shock protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="psp operon transcription co-activator" /protein_id="AAC74387.1" /db_xref="GI:1787563" /db_xref="ASAP:ABE-0004389" /db_xref="UniProtKB/Swiss-Prot:P0AFM9" /db_xref="EcoGene:EG10777" /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA QLADEAKRMRERIQALESILDAEHPNWRDR" gene 1238546..1238905 /gene="pspC" /locus_tag="b1306" /gene_synonym="ECK1301" /gene_synonym="JW1299" /db_xref="EcoGene:EG10778" CDS 1238546..1238905 /gene="pspC" /locus_tag="b1306" /gene_synonym="ECK1301" /gene_synonym="JW1299" /function="factor; Phage-related functions and prophages" /note="phage shock protein: activates phage shock-protein expression; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="psp operon transcription co-activator" /protein_id="AAC74388.1" /db_xref="GI:1787564" /db_xref="ASAP:ABE-0004391" /db_xref="UniProtKB/Swiss-Prot:P0AFN2" /db_xref="EcoGene:EG10778" /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME RYVTSDTFTLRSRFRQL" gene 1238914..1239135 /gene="pspD" /locus_tag="b1307" /gene_synonym="ECK1302" /gene_synonym="JW1300" /db_xref="EcoGene:EG10779" CDS 1238914..1239135 /gene="pspD" /locus_tag="b1307" /gene_synonym="ECK1302" /gene_synonym="JW1300" /function="IS, phage, Tn; Phage-related functions and prophages" /note="phage shock protein" /codon_start=1 /transl_table=11 /product="peripheral inner membrane phage-shock protein" /protein_id="AAC74389.1" /db_xref="GI:1787565" /db_xref="ASAP:ABE-0004394" /db_xref="UniProtKB/Swiss-Prot:P0AFV8" /db_xref="EcoGene:EG10779" /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA RRPLKMLLAVALEPLLSRAANKLAQRYKR" gene 1239210..1239524 /gene="pspE" /locus_tag="b1308" /gene_synonym="ECK1303" /gene_synonym="JW1301" /db_xref="EcoGene:EG10780" CDS 1239210..1239524 /gene="pspE" /locus_tag="b1308" /gene_synonym="ECK1303" /gene_synonym="JW1301" /EC_number="2.8.1.1" /function="IS, phage, Tn; Phage-related functions and prophages" /note="phage shock protein" /codon_start=1 /transl_table=11 /product="thiosulfate:cyanide sulfurtransferase (rhodanese)" /protein_id="AAC74390.1" /db_xref="GI:1787567" /db_xref="ASAP:ABE-0004397" /db_xref="UniProtKB/Swiss-Prot:P23857" /db_xref="EcoGene:EG10780" /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV KG" gene 1239737..1241416 /gene="ycjM" /locus_tag="b1309" /gene_synonym="ECK1304" /gene_synonym="JW1302" /db_xref="EcoGene:EG13910" CDS 1239737..1241416 /gene="ycjM" /locus_tag="b1309" /gene_synonym="ECK1304" /gene_synonym="JW1302" /function="putative enzyme; Not classified" /note="putative polysaccharide hydrolase; GO_process: GO:0000272 - polysaccharide catabolic process" /codon_start=1 /transl_table=11 /product="alpha amylase catalytic domain family protein" /protein_id="AAC74391.2" /db_xref="GI:87081873" /db_xref="ASAP:ABE-0004400" /db_xref="UniProtKB/Swiss-Prot:P76041" /db_xref="EcoGene:EG13910" /translation="MKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHW DESDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVID YHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDP QTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCY LAKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPH KDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFL ASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALS RRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKY HSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIPRSN ADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIK" gene 1241430..1242722 /gene="ycjN" /locus_tag="b1310" /gene_synonym="ECK1305" /gene_synonym="JW1303" /db_xref="EcoGene:EG13911" CDS 1241430..1242722 /gene="ycjN" /locus_tag="b1310" /gene_synonym="ECK1305" /gene_synonym="JW1303" /function="putative transport; Not classified" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative ABC sugar transporter periplasmic binding protein" /protein_id="AAC74392.1" /db_xref="GI:1787569" /db_xref="ASAP:ABE-0004402" /db_xref="UniProtKB/Swiss-Prot:P76042" /db_xref="EcoGene:EG13911" /translation="MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQA VISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKE QLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKA GLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEG KITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKE GDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMM SPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDV TGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH" gene 1242743..1243624 /gene="ycjO" /locus_tag="b1311" /gene_synonym="ECK1306" /gene_synonym="JW1304" /db_xref="EcoGene:EG13912" CDS 1242743..1243624 /gene="ycjO" /locus_tag="b1311" /gene_synonym="ECK1306" /gene_synonym="JW1304" /function="putative transport; Not classified" /note="putative binding-protein dependent transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter permease" /protein_id="AAC74393.1" /db_xref="GI:1787570" /db_xref="ASAP:ABE-0004405" /db_xref="UniProtKB/Swiss-Prot:P0AFR7" /db_xref="EcoGene:EG13912" /translation="MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRL PLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREF RLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPG SSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMP VLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIII FAVILLTRKRVNLNGNK" gene 1243611..1244453 /gene="ycjP" /locus_tag="b1312" /gene_synonym="ECK1307" /gene_synonym="JW1305" /db_xref="EcoGene:EG13913" CDS 1243611..1244453 /gene="ycjP" /locus_tag="b1312" /gene_synonym="ECK1307" /gene_synonym="JW1305" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter permease" /protein_id="AAC74394.1" /db_xref="GI:1787571" /db_xref="ASAP:ABE-0004409" /db_xref="UniProtKB/Swiss-Prot:P77716" /db_xref="EcoGene:EG13913" /translation="MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAIS LHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRL RFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFM LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFAS IFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAG GVKG" gene 1244484..1245536 /gene="ycjQ" /locus_tag="b1313" /gene_synonym="ECK1308" /gene_synonym="JW1306" /db_xref="EcoGene:EG13914" CDS 1244484..1245536 /gene="ycjQ" /locus_tag="b1313" /gene_synonym="ECK1308" /gene_synonym="JW1306" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC74395.1" /db_xref="GI:1787572" /db_xref="ASAP:ABE-0004412" /db_xref="UniProtKB/Swiss-Prot:P76043" /db_xref="EcoGene:EG13914" /translation="MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVD FRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVG DSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEI KTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNN AKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFANSPESYMQ YVDQHPEQSIKMGVTF" gene 1245555..1246343 /gene="ycjR" /locus_tag="b1314" /gene_synonym="ECK1309" /gene_synonym="JW5202" /db_xref="EcoGene:EG13915" CDS 1245555..1246343 /gene="ycjR" /locus_tag="b1314" /gene_synonym="ECK1309" /gene_synonym="JW5202" /function="putative factor; Not classified" /codon_start=1 /transl_table=11 /product="putative TIM alpha/beta barrel enzyme" /protein_id="AAC74396.2" /db_xref="GI:87081874" /db_xref="ASAP:ABE-0004414" /db_xref="UniProtKB/Swiss-Prot:P76044" /db_xref="EcoGene:EG13915" /translation="MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNIEEV KAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAW GMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLA DARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGT LDFHALFEQLRADNYQGYVVYEGRIRAEDPAQAYRDSLAWLRTC" gene 1246353..1247408 /gene="ycjS" /locus_tag="b1315" /gene_synonym="ECK1310" /gene_synonym="JW1308" /db_xref="EcoGene:EG13916" CDS 1246353..1247408 /gene="ycjS" /locus_tag="b1315" /gene_synonym="ECK1310" /gene_synonym="JW1308" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="putative NADH-binding oxidoreductase" /protein_id="AAC74397.1" /db_xref="GI:1787574" /db_xref="ASAP:ABE-0004416" /db_xref="UniProtKB/Swiss-Prot:P77503" /db_xref="EcoGene:EG13916" /translation="MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSR LSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCE KPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARA LRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQK SCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGA TLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQ LVAALYQSAETGTRVEL" gene 1247405..1249672 /gene="ycjT" /locus_tag="b1316" /gene_synonym="ECK1311" /gene_synonym="JW1309" /db_xref="EcoGene:EG13917" CDS 1247405..1249672 /gene="ycjT" /locus_tag="b1316" /gene_synonym="ECK1311" /gene_synonym="JW1309" /codon_start=1 /transl_table=11 /product="putative family 65 glycosyl hydrolase" /protein_id="AAC74398.1" /db_xref="GI:1787575" /db_xref="ASAP:ABE-0004418" /db_xref="UniProtKB/Swiss-Prot:P77154" /db_xref="EcoGene:EG13917" /translation="MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQ TRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEVFSLSHEAWQRELDFASGELR RNVVWRTSNGSGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGSYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTS AQLHAGETMTLQKLVWIDWRDDRQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWR QWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWD TEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETP EFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAK FWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAYTSYMARYNVQQALNIARQFGCSDDA FIHRAEMFLKELWMPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEV NEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGL LTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPA LPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLITVAEESVFCLGDF ILPFNGTATKHQEDE" gene 1249669..1250328 /gene="ycjU" /locus_tag="b1317" /gene_synonym="ECK1312" /gene_synonym="JW1310" /db_xref="EcoGene:EG13918" CDS 1249669..1250328 /gene="ycjU" /locus_tag="b1317" /gene_synonym="ECK1312" /gene_synonym="JW1310" /function="enzyme; Not classified" /note="putative beta-phosphoglucomutase" /codon_start=1 /transl_table=11 /product="beta-phosphoglucomutase" /protein_id="AAC74399.1" /db_xref="GI:1787576" /db_xref="ASAP:ABE-0004420" /db_xref="UniProtKB/Swiss-Prot:P77366" /db_xref="EcoGene:EG13918" /translation="MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESL KGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLL ADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQN V" gene 1250342..1251423 /gene="ycjV" /locus_tag="b4524" /gene_synonym="ECK1313" /gene_synonym="JW1311" /gene_synonym="ymjB" /pseudo /db_xref="EcoGene:EG13919" CDS join(1250342..1251298,1251298..1251423) /gene="ycjV" /locus_tag="b4524" /gene_synonym="ECK1313" /gene_synonym="JW1311" /gene_synonym="ymjB" /note="pseudogene; putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004422" /db_xref="ASAP:ABE-0285045" /db_xref="UniProtKB/Swiss-Prot:P77481" /db_xref="EcoGene:EG13919" gene 1251468..1252373 /gene="ompG" /locus_tag="b1319" /gene_synonym="ECK1315" /gene_synonym="JW1312" /db_xref="EcoGene:EG13428" CDS 1251468..1252373 /gene="ompG" /locus_tag="b1319" /gene_synonym="ECK1315" /gene_synonym="JW1312" /function="membrane; Outer membrane constituents" /note="outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane porin G" /protein_id="AAC74401.1" /db_xref="GI:1787579" /db_xref="ASAP:ABE-0004425" /db_xref="UniProtKB/Swiss-Prot:P76045" /db_xref="EcoGene:EG13428" /translation="MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYG EDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLEND DFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYL PLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYA FEWQDHDEGDSDKFHYAGVGVNYSF" repeat_region 1252388..1252461 /note="REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1252484..1253482) /gene="ycjW" /locus_tag="b1320" /gene_synonym="ECK1316" /gene_synonym="JW1313" /db_xref="EcoGene:EG13920" CDS complement(1252484..1253482) /gene="ycjW" /locus_tag="b1320" /gene_synonym="ECK1316" /gene_synonym="JW1313" /function="putative regulator; Not classified" /note="putative LACI-type transcriptional regulator; GO_component: GO:0042597 - periplasmic space; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LacI family putative transcriptional repressor" /protein_id="AAC74402.1" /db_xref="GI:1787580" /db_xref="ASAP:ABE-0004428" /db_xref="UniProtKB/Swiss-Prot:P77615" /db_xref="EcoGene:EG13920" /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL QYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT SHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHV YSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRD EWIVDGGYTHETALKAARQLLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAV VGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK" gene 1253638..1255035 /gene="ycjX" /locus_tag="b1321" /gene_synonym="ECK1317" /gene_synonym="JW1314" /db_xref="EcoGene:EG13921" CDS 1253638..1255035 /gene="ycjX" /locus_tag="b1321" /gene_synonym="ECK1317" /gene_synonym="JW1314" /function="putative enzyme; Not classified" /note="putative EC 2.1 enzymes" /codon_start=1 /transl_table=11 /product="DUF463 family protein, puatative P-loop NTPase" /protein_id="AAC74403.1" /db_xref="GI:1787581" /db_xref="ASAP:ABE-0004433" /db_xref="UniProtKB/Swiss-Prot:P76046" /db_xref="EcoGene:EG13921" /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL NGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVL PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI RLDAALEFLIGDKLR" gene 1255032..1256093 /gene="ycjF" /locus_tag="b1322" /gene_synonym="ECK1318" /gene_synonym="JW1315" /db_xref="EcoGene:EG12870" CDS 1255032..1256093 /gene="ycjF" /locus_tag="b1322" /gene_synonym="ECK1318" /gene_synonym="JW1315" /codon_start=1 /transl_table=11 /product="UPF0283 family inner membrane protein" /protein_id="AAC74404.1" /db_xref="GI:1787582" /db_xref="ASAP:ABE-0004436" /db_xref="UniProtKB/Swiss-Prot:P0A8R7" /db_xref="EcoGene:EG12870" /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE AQEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMI AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR QLIGQVKETLQKGKTPSEK" gene 1256241..1257782 /gene="tyrR" /locus_tag="b1323" /gene_synonym="ECK1319" /gene_synonym="JW1316" /db_xref="EcoGene:EG11042" CDS 1256241..1257782 /gene="tyrR" /locus_tag="b1323" /gene_synonym="ECK1319" /gene_synonym="JW1316" /function="regulator; Transport of small molecules: Amino acids, amines" /experiment="N-terminus verified by Edman degradation: PMID 8444880" /note="transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase" /protein_id="AAC74405.1" /db_xref="GI:1787583" /db_xref="ASAP:ABE-0004440" /db_xref="UniProtKB/Swiss-Prot:P07604" /db_xref="EcoGene:EG11042" /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ KKNEE" repeat_region 1257793..1257817 /note="REP114 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1257826..1258332) /gene="tpx" /locus_tag="b1324" /gene_synonym="ECK1320" /gene_synonym="JW1317" /gene_synonym="yzzJ" /db_xref="EcoGene:EG12672" CDS complement(1257826..1258332) /gene="tpx" /locus_tag="b1324" /gene_synonym="ECK1320" /gene_synonym="JW1317" /gene_synonym="yzzJ" /EC_number="1.11.1.-" /function="enzyme; Detoxification" /note="thiol peroxidase; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="lipid hydroperoxide peroxidase" /protein_id="AAC74406.1" /db_xref="GI:1787584" /db_xref="ASAP:ABE-0004442" /db_xref="UniProtKB/Swiss-Prot:P0A862" /db_xref="EcoGene:EG12672" /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN VITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE AALAVLKA" gene 1258451..1259416 /gene="ycjG" /locus_tag="b1325" /gene_synonym="ECK1321" /gene_synonym="JW1318" /gene_synonym="ycjH" /db_xref="EcoGene:EG13228" CDS 1258451..1259416 /gene="ycjG" /locus_tag="b1325" /gene_synonym="ECK1321" /gene_synonym="JW1318" /gene_synonym="ycjH" /function="putative enzyme; Not classified" /note="putative muconate cycloisomerase I" /codon_start=1 /transl_table=11 /product="L-Ala-D/L-Glu epimerase" /protein_id="AAC74407.2" /db_xref="GI:87081876" /db_xref="ASAP:ABE-0004448" /db_xref="UniProtKB/Swiss-Prot:P51981" /db_xref="EcoGene:EG13228" /translation="MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGE CTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARR QQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISER MVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIH PLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCM LCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL" gene complement(1259391..1260119) /gene="mpaA" /locus_tag="b1326" /gene_synonym="ECK1322" /gene_synonym="JW1319" /gene_synonym="ycjI" /db_xref="EcoGene:EG13906" CDS complement(1259391..1260119) /gene="mpaA" /locus_tag="b1326" /gene_synonym="ECK1322" /gene_synonym="JW1319" /gene_synonym="ycjI" /function="enzyme; Not classified" /note="putative carboxypeptidase" /codon_start=1 /transl_table=11 /product="murein peptide amidase A" /protein_id="AAC74408.2" /db_xref="GI:226510938" /db_xref="ASAP:ABE-0004450" /db_xref="UniProtKB/Swiss-Prot:P0ACV6" /db_xref="EcoGene:EG13906" /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE ASEKYLFAMANLLRWHPKDAIRPS" gene complement(1260246..1260383) /gene="ymjC" /locus_tag="b4525" /gene_synonym="ECK1323" /gene_synonym="JW5960" /pseudo /db_xref="EcoGene:EG14420" CDS complement(1260246..1260383) /gene="ymjC" /locus_tag="b4525" /gene_synonym="ECK1323" /gene_synonym="JW5960" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285046" /db_xref="UniProtKB/Swiss-Prot:Q2EER5" /db_xref="EcoGene:EG14420" gene complement(1260389..1260454) /gene="ymjD" /locus_tag="b4673" /gene_synonym="ECK4488" /pseudo /db_xref="EcoGene:EG14478" CDS complement(1260389..1260454) /gene="ymjD" /locus_tag="b4673" /gene_synonym="ECK4488" /note="pseudogene fragment, MhpC family" /pseudo /codon_start=1 /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P0CD93" /db_xref="EcoGene:EG14478" gene complement(1260454..1261374) /gene="ycjY" /locus_tag="b1327" /gene_synonym="ECK1324" /gene_synonym="JW5804" /db_xref="EcoGene:EG13922" CDS complement(1260454..1261374) /gene="ycjY" /locus_tag="b1327" /gene_synonym="ECK1324" /gene_synonym="JW5804" /codon_start=1 /transl_table=11 /product="S9 homolog non-peptidase family protein" /protein_id="AAC74409.2" /db_xref="GI:221142683" /db_xref="ASAP:ABE-0004453" /db_xref="UniProtKB/Swiss-Prot:P76049" /db_xref="EcoGene:EG13922" /translation="MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGG GVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTT LSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSID ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPG YATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIV EGANHMDLYDGKAYVAEAISVLAPFFEETL" gene 1261512..1262411 /gene="pgrR" /locus_tag="b1328" /gene_synonym="ECK1325" /gene_synonym="JW1321" /gene_synonym="ycjZ" /db_xref="EcoGene:EG13923" CDS 1261512..1262411 /gene="pgrR" /locus_tag="b1328" /gene_synonym="ECK1325" /gene_synonym="JW1321" /gene_synonym="ycjZ" /function="regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="murein peptide degradation regulator" /protein_id="AAC74410.1" /db_xref="GI:1787589" /db_xref="ASAP:ABE-0004457" /db_xref="UniProtKB/Swiss-Prot:P77333" /db_xref="EcoGene:EG13923" /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITTVE HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY PHRRHAGSAFSLFIDRLKYKGAV" gene 1262748..1264361 /gene="mppA" /locus_tag="b1329" /gene_synonym="ECK1326" /gene_synonym="JW1322" /gene_synonym="ynaH" /db_xref="EcoGene:EG13376" CDS 1262748..1264361 /gene="mppA" /locus_tag="b1329" /gene_synonym="ECK1326" /gene_synonym="JW1322" /gene_synonym="ynaH" /function="transport; Not classified" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0000270 - peptidoglycan metabolic process" /codon_start=1 /transl_table=11 /product="murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit" /protein_id="AAC74411.2" /db_xref="GI:87081878" /db_xref="ASAP:ABE-0004460" /db_xref="UniProtKB/Swiss-Prot:P77348" /db_xref="EcoGene:EG13376" /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG RLIKPWLKGYPINNPEDVAYSRTMYIVKH" gene complement(1264412..1265443) /gene="ynaI" /locus_tag="b1330" /gene_synonym="ECK1327" /gene_synonym="JW1323" /db_xref="EcoGene:EG13924" CDS complement(1264412..1265443) /gene="ynaI" /locus_tag="b1330" /gene_synonym="ECK1327" /gene_synonym="JW1323" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, very small conductance" /protein_id="AAC74412.1" /db_xref="GI:1787591" /db_xref="ASAP:ABE-0004462" /db_xref="UniProtKB/Swiss-Prot:P0AEB5" /db_xref="EcoGene:EG13924" /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD NITPPEQGR" mobile_element 1265565..1266759 /mobile_element_type="insertion sequence:IS5F" gene 1265597..1266613 /gene="insH1" /locus_tag="b1331" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS 1265597..1266613 /gene="insH1" /locus_tag="b1331" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC74413.1" /db_xref="GI:1787592" /db_xref="ASAP:ABE-0004467" /db_xref="UniProtKB/Swiss-Prot:P0CE52" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 1266886..1267143 /gene="ynaJ" /locus_tag="b1332" /gene_synonym="ECK1328" /gene_synonym="JW1326" /db_xref="EcoGene:EG14294" CDS 1266886..1267143 /gene="ynaJ" /locus_tag="b1332" /gene_synonym="ECK1328" /gene_synonym="JW1326" /codon_start=1 /transl_table=11 /product="DUF2534 family putative inner membrane protein" /protein_id="AAC74414.1" /db_xref="GI:1787593" /db_xref="ASAP:ABE-0004470" /db_xref="UniProtKB/Swiss-Prot:P64445" /db_xref="EcoGene:EG14294" /translation="MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIP LSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ" gene complement(1267193..1268143) /gene="uspE" /locus_tag="b1333" /gene_synonym="ECK1329" /gene_synonym="JW1327" /gene_synonym="ydaA" /db_xref="EcoGene:EG11246" CDS complement(1267193..1268143) /gene="uspE" /locus_tag="b1333" /gene_synonym="ECK1329" /gene_synonym="JW1327" /gene_synonym="ydaA" /codon_start=1 /transl_table=11 /product="stress-induced protein" /protein_id="AAC74415.1" /db_xref="GI:1787594" /db_xref="ASAP:ABE-0004472" /db_xref="UniProtKB/Swiss-Prot:P0AAC0" /db_xref="EcoGene:EG11246" /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD" gene complement(1268295..1269047) /gene="fnr" /locus_tag="b1334" /gene_synonym="ECK1330" /gene_synonym="JW1328" /gene_synonym="nirA" /gene_synonym="nirR" /gene_synonym="ossA" /db_xref="EcoGene:EG10325" CDS complement(1268295..1269047) /gene="fnr" /locus_tag="b1334" /gene_synonym="ECK1330" /gene_synonym="JW1328" /gene_synonym="nirA" /gene_synonym="nirR" /gene_synonym="ossA" /function="regulator; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 2181237" /note="transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="oxygen-sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor" /protein_id="AAC74416.1" /db_xref="GI:1787595" /db_xref="ASAP:ABE-0004475" /db_xref="UniProtKB/Swiss-Prot:P0A9E5" /db_xref="EcoGene:EG10325" /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF QKSGMLAVKGKYITIENNDALAQLAGHTRNVA" gene complement(1269242..1269757) /gene="ogt" /locus_tag="b1335" /gene_synonym="ECK1331" /gene_synonym="JW1329" /db_xref="EcoGene:EG10668" CDS complement(1269242..1269757) /gene="ogt" /locus_tag="b1335" /gene_synonym="ECK1331" /gene_synonym="JW1329" /EC_number="2.1.1.63" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2825131" /note="O-6-alkylguanine-DNA/cysteine-protein methyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006306 - DNA methylation" /codon_start=1 /transl_table=11 /product="O-6-alkylguanine-DNA:cysteine-protein methyltransferase" /protein_id="AAC74417.1" /db_xref="GI:1787596" /db_xref="ASAP:ABE-0004486" /db_xref="UniProtKB/Swiss-Prot:P0AFH0" /db_xref="EcoGene:EG10668" /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI HYRKEGYERISATNPGGLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE WLLRHEGYLLL" gene complement(1269768..1271294) /gene="abgT" /locus_tag="b1336" /gene_synonym="ECK1332" /gene_synonym="JW5822" /gene_synonym="ydaH" /db_xref="EcoGene:EG12853" CDS complement(1269768..1271294) /gene="abgT" /locus_tag="b1336" /gene_synonym="ECK1332" /gene_synonym="JW5822" /gene_synonym="ydaH" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="p-aminobenzoyl-glutamate transporter; membrane protein" /protein_id="AAC74418.2" /db_xref="GI:87081879" /db_xref="ASAP:ABE-0004488" /db_xref="UniProtKB/Swiss-Prot:P46133" /db_xref="EcoGene:EG12853" /translation="MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTT AILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAG LAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVG RHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMA SSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAI ALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPH LMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLA LLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPF VPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS " gene complement(1271331..1272776) /gene="abgB" /locus_tag="b1337" /gene_synonym="ECK1333" /gene_synonym="JW1331" /gene_synonym="ydaI" /db_xref="EcoGene:EG13351" CDS complement(1271331..1272776) /gene="abgB" /locus_tag="b1337" /gene_synonym="ECK1333" /gene_synonym="JW1331" /gene_synonym="ydaI" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 20190044" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="p-aminobenzoyl-glutamate hydrolase, B subunit" /protein_id="AAC74419.1" /db_xref="GI:1787598" /db_xref="ASAP:ABE-0004491" /db_xref="UniProtKB/Swiss-Prot:P76052" /db_xref="EcoGene:EG13351" /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA SALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMT TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQ ATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDV SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGL LQECQQEHQQVTDTQPYHCPIPKNVTPSPLK" gene complement(1272776..1274086) /gene="abgA" /locus_tag="b1338" /gene_synonym="ECK1334" /gene_synonym="JW5205" /gene_synonym="ydaJ" /db_xref="EcoGene:EG13352" CDS complement(1272776..1274086) /gene="abgA" /locus_tag="b1338" /gene_synonym="ECK1334" /gene_synonym="JW5205" /gene_synonym="ydaJ" /EC_number="3.5.1.14" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 20190044" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="p-aminobenzoyl-glutamate hydrolase, A subunit" /protein_id="AAC74420.2" /db_xref="GI:87081880" /db_xref="ASAP:ABE-0004493" /db_xref="UniProtKB/Swiss-Prot:P77357" /db_xref="EcoGene:EG13352" /translation="MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELH QLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATL DTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGL AHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTV VCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRV NVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRL MGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQAS YVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI" gene 1274262..1275170 /gene="abgR" /locus_tag="b1339" /gene_synonym="ECK1335" /gene_synonym="JW1333" /gene_synonym="ydaK" /db_xref="EcoGene:EG13353" CDS 1274262..1275170 /gene="abgR" /locus_tag="b1339" /gene_synonym="ECK1335" /gene_synonym="JW1333" /gene_synonym="ydaK" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator of abgABT operon" /protein_id="AAC74421.1" /db_xref="GI:1787601" /db_xref="ASAP:ABE-0004496" /db_xref="UniProtKB/Swiss-Prot:P77744" /db_xref="EcoGene:EG13353" /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT PQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ RRDSRQTPLTASLITQFRRECGYLQS" gene complement(1275177..1275272) /gene="mcaS" /locus_tag="b4426" /gene_synonym="ECK1336" /gene_synonym="IS061" /gene_synonym="isrA" /gene_synonym="JWR0233" /db_xref="EcoGene:EG31143" ncRNA complement(1275177..1275272) /ncRNA_class="antisense_RNA" /gene="mcaS" /locus_tag="b4426" /gene_synonym="ECK1336" /gene_synonym="IS061" /gene_synonym="isrA" /gene_synonym="JWR0233" /product="motility and biofilm regulator sRNA" /note="identified in a large scale screen" /function="represses csgD, activates flhD, regulates pgaA" /db_xref="ASAP:ABE-0047247" /db_xref="EcoGene:EG31143" gene 1275500..1276063 /gene="smrA" /locus_tag="b1340" /gene_synonym="ECK1337" /gene_synonym="JW1334" /gene_synonym="ydaL" /db_xref="EcoGene:EG13354" CDS 1275500..1276063 /gene="smrA" /locus_tag="b1340" /gene_synonym="ECK1337" /gene_synonym="JW1334" /gene_synonym="ydaL" /codon_start=1 /transl_table=11 /product="DNA endonuclease" /protein_id="AAC74422.1" /db_xref="GI:1787602" /db_xref="ASAP:ABE-0004502" /db_xref="UniProtKB/Swiss-Prot:P76053" /db_xref="EcoGene:EG13354" /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV FSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG SGACYVALRKTAQAKQENWERHAKRSR" gene complement(1276084..1277316) /gene="ydaM" /locus_tag="b1341" /gene_synonym="ECK1338" /gene_synonym="JW5206" /db_xref="EcoGene:EG13355" CDS complement(1276084..1277316) /gene="ydaM" /locus_tag="b1341" /gene_synonym="ECK1338" /gene_synonym="JW5206" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, csgD regulator" /protein_id="AAC74423.2" /db_xref="GI:87081881" /db_xref="ASAP:ABE-0004504" /db_xref="UniProtKB/Swiss-Prot:P77302" /db_xref="EcoGene:EG13355" /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQ LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVI IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV DDALYRAKNDGRNRVLAA" gene 1277571..1278554 /gene="ydaN" /locus_tag="b1342" /gene_synonym="ECK1339" /gene_synonym="JW1336" /gene_synonym="zntB" /db_xref="EcoGene:EG13356" CDS 1277571..1278554 /gene="ydaN" /locus_tag="b1342" /gene_synonym="ECK1339" /gene_synonym="JW1336" /gene_synonym="zntB" /codon_start=1 /transl_table=11 /product="putative Zn(II) transporter" /protein_id="AAC74424.1" /db_xref="GI:1787604" /db_xref="ASAP:ABE-0004508" /db_xref="UniProtKB/Swiss-Prot:P64423" /db_xref="EcoGene:EG13356" /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL" gene 1278650..1278771 /gene="fnrS" /locus_tag="b4699" /gene_synonym="ECK4511" /gene_synonym="rydA" /db_xref="EcoGene:EG31185" ncRNA 1278650..1278771 /ncRNA_class="antisense_RNA" /gene="fnrS" /locus_tag="b4699" /gene_synonym="ECK4511" /gene_synonym="rydA" /product="FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation" /db_xref="ASAP:ABE-0285265" /db_xref="EcoGene:EG31185" gene 1279032..1280405 /gene="dbpA" /locus_tag="b1343" /gene_synonym="ECK1340" /gene_synonym="JW1337" /gene_synonym="rhlC" /db_xref="EcoGene:EG10210" CDS 1279032..1280405 /gene="dbpA" /locus_tag="b1343" /gene_synonym="ECK1340" /gene_synonym="JW1337" /gene_synonym="rhlC" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="ATP-dependent RNA helicase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase, specific for 23S rRNA" /protein_id="AAC74425.1" /db_xref="GI:1787605" /db_xref="ASAP:ABE-0004511" /db_xref="UniProtKB/Swiss-Prot:P21693" /db_xref="EcoGene:EG10210" /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQ QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKK AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT CRVRLLK" repeat_region 1280454..1280490 /note="REP115 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1280534..1281469) /gene="ttcA" /locus_tag="b1344" /gene_synonym="ECK1341" /gene_synonym="JW1338" /gene_synonym="stcA" /gene_synonym="ydaO" /db_xref="EcoGene:EG13357" CDS complement(1280534..1281469) /gene="ttcA" /locus_tag="b1344" /gene_synonym="ECK1341" /gene_synonym="JW1338" /gene_synonym="stcA" /gene_synonym="ydaO" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="tRNA s(2)C32 thioltransferase, iron sulfur cluster protein" /protein_id="AAC74426.1" /db_xref="GI:1787606" /db_xref="ASAP:ABE-0004514" /db_xref="UniProtKB/Swiss-Prot:P76055" /db_xref="EcoGene:EG13357" /translation="MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKI VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD LAFDREEIPLQPACWQPEEDENQLDELRLNVVEVK" misc_feature 1281420..1304479 /note="cryptic prophage Rac" gene complement(1281521..1282756) /gene="intR" /locus_tag="b1345" /gene_synonym="ECK1342" /gene_synonym="JW1339" /gene_synonym="ydaP" /db_xref="EcoGene:EG13358" CDS complement(1281521..1282756) /gene="intR" /locus_tag="b1345" /gene_synonym="ECK1342" /gene_synonym="JW1339" /gene_synonym="ydaP" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; integrase" /protein_id="AAC74427.1" /db_xref="GI:1787607" /db_xref="ASAP:ABE-0004517" /db_xref="UniProtKB/Swiss-Prot:P76056" /db_xref="EcoGene:EG13358" /translation="MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAG NLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT VDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG MWIDDMNDEQIAMLNARLS" gene complement(1282758..1282973) /gene="ydaQ" /locus_tag="b1346" /gene_synonym="ECK1343" /gene_synonym="JW5207" /db_xref="EcoGene:EG13359" CDS complement(1282758..1282973) /gene="ydaQ" /locus_tag="b1346" /gene_synonym="ECK1343" /gene_synonym="JW5207" /function="Phage or Prophage Related" /note="putative lambdoid prophage Rac excisionase" /codon_start=1 /transl_table=11 /product="Rac prophage; conserved protein" /protein_id="AAC74428.2" /db_xref="GI:87081882" /db_xref="ASAP:ABE-0004519" /db_xref="UniProtKB/Swiss-Prot:P76057" /db_xref="EcoGene:EG13359" /translation="MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRV SPLGKPDSKRGIIWYNYPKINQFIKDS" gene complement(1283052..1283261) /gene="ydaC" /locus_tag="b1347" /gene_synonym="ECK1344" /gene_synonym="JW1341" /gene_synonym="rcbA" /db_xref="EcoGene:EG11901" CDS complement(1283052..1283261) /gene="ydaC" /locus_tag="b1347" /gene_synonym="ECK1344" /gene_synonym="JW1341" /gene_synonym="rcbA" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="DUF1187 family protein, Rac prophage; putative double-strand break reduction protein" /protein_id="AAC74429.1" /db_xref="GI:1787609" /db_xref="ASAP:ABE-0004522" /db_xref="UniProtKB/Swiss-Prot:P33230" /db_xref="EcoGene:EG11901" /translation="MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVS REQKVKLINFNCEKLQSSRIALYSN" gene 1283077..1283255 /gene="ralA" /locus_tag="b4714" /gene_synonym="ECK4571" /gene_synonym="rcbA" /note="Antisense sRNA antitoxin for the RalR toxin" /db_xref="EcoGene:EG31192" gene complement(1283254..1283448) /gene="ralR" /locus_tag="b1348" /gene_synonym="ECK1345" /gene_synonym="JW5208" /gene_synonym="lar" /gene_synonym="ral" /gene_synonym="ydaB" /db_xref="EcoGene:EG11900" CDS complement(1283254..1283448) /gene="ralR" /locus_tag="b1348" /gene_synonym="ECK1345" /gene_synonym="JW5208" /gene_synonym="lar" /gene_synonym="ral" /gene_synonym="ydaB" /function="enzyme; Phage or Prophage Related" /note="restriction alleviation and modification enhancement" /codon_start=1 /transl_table=11 /product="Rac prophage; restriction alleviation protein" /protein_id="AAC74430.1" /db_xref="GI:1787610" /db_xref="ASAP:ABE-0004524" /db_xref="UniProtKB/Swiss-Prot:P33229" /db_xref="EcoGene:EG11900" /translation="MRYDNVKPCPFCGCPSVTVKAISGYYRAKCNGCESRTGYGGSEK EALERWNKRTTGNNNGGVHV" gene complement(1283505..1284314) /gene="recT" /locus_tag="b1349" /gene_synonym="ECK1346" /gene_synonym="JW1343" /db_xref="EcoGene:EG11899" CDS complement(1283505..1284314) /gene="recT" /locus_tag="b1349" /gene_synonym="ECK1346" /gene_synonym="JW1343" /function="enzyme; DNA - replication, repair, restriction/modification: Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 8416902" /note="recombinase, DNA renaturation" /codon_start=1 /transl_table=11 /product="Rac prophage; recombination and repair protein" /protein_id="AAC74431.1" /db_xref="GI:1787611" /db_xref="ASAP:ABE-0004529" /db_xref="UniProtKB/Swiss-Prot:P33228" /db_xref="EcoGene:EG11899" /translation="MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAA ALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLP FGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAK KTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE" gene complement(1284307..1286907) /gene="recE" /locus_tag="b1350" /gene_synonym="ECK1347" /gene_synonym="JW1344" /gene_synonym="rmuB" /gene_synonym="sbcA" /db_xref="EcoGene:EG10827" CDS complement(1284307..1286907) /gene="recE" /locus_tag="b1350" /gene_synonym="ECK1347" /gene_synonym="JW1344" /gene_synonym="rmuB" /gene_synonym="sbcA" /EC_number="3.1.11.-" /function="enzyme; Degradation of DNA; Phage or Prophage Related" /note="exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease" /protein_id="AAC74432.1" /db_xref="GI:1787612" /db_xref="ASAP:ABE-0004531" /db_xref="UniProtKB/Swiss-Prot:P15032" /db_xref="EcoGene:EG10827" /translation="MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSG KKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQG NTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEEL PAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYT DRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARS MDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIG IEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQP SGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSK NPVDDDKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPV VQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHP HNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGISKSQLDDIAD TPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEE KAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETG ILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPT FVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSL PRWAKEYAND" gene complement(1287009..1287284) /gene="racC" /locus_tag="b1351" /gene_synonym="ECK1348" /gene_synonym="JW1345" /gene_synonym="sbcA" /db_xref="EcoGene:EG10813" CDS complement(1287009..1287284) /gene="racC" /locus_tag="b1351" /gene_synonym="ECK1348" /gene_synonym="JW1345" /gene_synonym="sbcA" /function="membrane; Phage or Prophage Related" /experiment="N-terminus verified by Edman degradation: PMID 3056915" /note="RacC protein" /codon_start=1 /transl_table=11 /product="Rac prophage; uncharacterized protein" /protein_id="AAC74433.1" /db_xref="GI:1787614" /db_xref="ASAP:ABE-0004533" /db_xref="UniProtKB/Swiss-Prot:P15033" /db_xref="EcoGene:EG10813" /translation="MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDI DGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI" gene complement(1287359..1287529) /gene="ydaE" /locus_tag="b4526" /gene_synonym="ECK1349" /gene_synonym="JW1346" /db_xref="EcoGene:EG12156" CDS complement(1287359..1287529) /gene="ydaE" /locus_tag="b4526" /gene_synonym="ECK1349" /gene_synonym="JW1346" /function="Phage or Prophage Related" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="conserved protein, Rac prophage" /protein_id="ABD18659.1" /db_xref="GI:87081883" /db_xref="ASAP:ABE-0285047" /db_xref="UniProtKB/Swiss-Prot:P38394" /db_xref="EcoGene:EG12156" /translation="MTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSE ACAEKDQMAHEL" gene complement(1287529..1287750) /gene="kilR" /locus_tag="b1352" /gene_synonym="ECK1350" /gene_synonym="JW1347" /gene_synonym="kil" /gene_synonym="ydaD" /db_xref="EcoGene:EG12155" CDS complement(1287529..1287750) /gene="kilR" /locus_tag="b1352" /gene_synonym="ECK1350" /gene_synonym="JW1347" /gene_synonym="kil" /gene_synonym="ydaD" /function="Phage or Prophage Related" /note="Kil protein (killing function) of lambdoid prophage Rac" /codon_start=1 /transl_table=11 /product="killing protein, Rac prophage; FtsZ inhibitor protein" /protein_id="AAC74434.2" /db_xref="GI:87081884" /db_xref="ASAP:ABE-0004537" /db_xref="UniProtKB/Swiss-Prot:P38393" /db_xref="EcoGene:EG12155" /translation="MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIR NLTTKTFITDRMIKVFLGRDGLPVKAESW" gene 1288192..1288680 /gene="sieB" /locus_tag="b1353" /gene_synonym="ECK1351" /gene_synonym="git" /gene_synonym="JW5209" /db_xref="EcoGene:EG12154" CDS 1288192..1288680 /gene="sieB" /locus_tag="b1353" /gene_synonym="ECK1351" /gene_synonym="git" /gene_synonym="JW5209" /function="phenotype; Phage or Prophage Related" /note="phage superinfection exclusion protein" /codon_start=1 /transl_table=11 /product="phage superinfection exclusion protein, Rac prophage" /protein_id="AAC74435.2" /db_xref="GI:87081885" /db_xref="ASAP:ABE-0004540" /db_xref="UniProtKB/Swiss-Prot:P38392" /db_xref="EcoGene:EG12154" /translation="MLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNA YTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFL KTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRF NR" gene complement(1288677..1288832) /gene="ydaF" /locus_tag="b4527" /gene_synonym="ECK1352" /gene_synonym="JW1349" /db_xref="EcoGene:EG12157" CDS complement(1288677..1288832) /gene="ydaF" /locus_tag="b4527" /gene_synonym="ECK1352" /gene_synonym="JW1349" /function="Phage or Prophage Related" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein, Rac prophage" /protein_id="AAC74436.2" /db_xref="GI:87081886" /db_xref="ASAP:ABE-0285048" /db_xref="UniProtKB/Swiss-Prot:P0ACW0" /db_xref="EcoGene:EG12157" /translation="MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRW LEKHTVS" gene complement(1288843..1288977) /gene="ydaG" /locus_tag="b1355" /gene_synonym="ECK1353" /gene_synonym="gatA" /gene_synonym="JW5210" /db_xref="EcoGene:EG12174" CDS complement(1288843..1288977) /gene="ydaG" /locus_tag="b1355" /gene_synonym="ECK1353" /gene_synonym="gatA" /gene_synonym="JW5210" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; uncharacterized protein" /protein_id="AAC74437.2" /db_xref="GI:87081887" /db_xref="ASAP:ABE-0004544" /db_xref="UniProtKB/Swiss-Prot:P76061" /db_xref="EcoGene:EG12174" /translation="MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM " gene complement(1289286..1289762) /gene="racR" /locus_tag="b1356" /gene_synonym="cohR" /gene_synonym="ECK1354" /gene_synonym="JW1351" /gene_synonym="ydaR" /db_xref="EcoGene:EG13360" CDS complement(1289286..1289762) /gene="racR" /locus_tag="b1356" /gene_synonym="cohR" /gene_synonym="ECK1354" /gene_synonym="JW1351" /gene_synonym="ydaR" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; putative DNA-binding transcriptional regulator" /protein_id="AAC74438.1" /db_xref="GI:1787619" /db_xref="ASAP:ABE-0004548" /db_xref="UniProtKB/Swiss-Prot:P76062" /db_xref="EcoGene:EG13360" /translation="MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDW IKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASD EIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT" gene 1289886..1290182 /gene="ydaS" /locus_tag="b1357" /gene_synonym="ECK1355" /gene_synonym="JW1352" /db_xref="EcoGene:EG13361" CDS 1289886..1290182 /gene="ydaS" /locus_tag="b1357" /gene_synonym="ECK1355" /gene_synonym="JW1352" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; putative DNA-binding transcriptional regulator" /protein_id="AAC74439.1" /db_xref="GI:1787620" /db_xref="ASAP:ABE-0004552" /db_xref="UniProtKB/Swiss-Prot:P76063" /db_xref="EcoGene:EG13361" /translation="MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA ERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT" gene 1290205..1290627 /gene="ydaT" /locus_tag="b1358" /gene_synonym="ECK1356" /gene_synonym="JW1353" /db_xref="EcoGene:EG13362" CDS 1290205..1290627 /gene="ydaT" /locus_tag="b1358" /gene_synonym="ECK1356" /gene_synonym="JW1353" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; uncharacterized protein" /protein_id="AAC74440.1" /db_xref="GI:1787621" /db_xref="ASAP:ABE-0004556" /db_xref="UniProtKB/Swiss-Prot:P76064" /db_xref="EcoGene:EG13362" /translation="MKIKHEHIESVLFALAAEKGQAWVANAITEEYLRQGGGELPLVP GKDWNNQQNIYHRWLKGETKTQREKIQKLIPAILAILPRELRHRLCIFDTLERRALLA AQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVIVH" gene 1290640..1291497 /gene="ydaU" /locus_tag="b1359" /gene_synonym="ECK1357" /gene_synonym="JW1354" /db_xref="EcoGene:EG13363" CDS 1290640..1291497 /gene="ydaU" /locus_tag="b1359" /gene_synonym="ECK1357" /gene_synonym="JW1354" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; conserved protein" /protein_id="AAC74441.1" /db_xref="GI:1787622" /db_xref="ASAP:ABE-0004558" /db_xref="UniProtKB/Swiss-Prot:P76065" /db_xref="EcoGene:EG13363" /translation="MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHG AYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEED LASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKAT NKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRT EQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPD SAIPPGFRG" gene 1291504..1292250 /gene="ydaV" /locus_tag="b1360" /gene_synonym="ECK1358" /gene_synonym="JW1355" /db_xref="EcoGene:EG13364" CDS 1291504..1292250 /gene="ydaV" /locus_tag="b1360" /gene_synonym="ECK1358" /gene_synonym="JW1355" /function="Phage or Prophage Related" /note="putative DNA replication factor" /codon_start=1 /transl_table=11 /product="Rac prophage; putative DNA replication protein" /protein_id="AAC74442.1" /db_xref="GI:1787623" /db_xref="ASAP:ABE-0004560" /db_xref="UniProtKB/Swiss-Prot:P77546" /db_xref="EcoGene:EG13364" /translation="MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCE EINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTGCT NFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRE LCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERI MDRMTMNGGRWVNFNWESWRPNVVQPGIAK" gene 1292222..1292721 /gene="ydaW" /locus_tag="b1361" /gene_synonym="ECK1359" /gene_synonym="JW5211" /pseudo /db_xref="EcoGene:EG13365" CDS 1292222..1292721 /gene="ydaW" /locus_tag="b1361" /gene_synonym="ECK1359" /gene_synonym="JW5211" /note="Rac prophage; pseudogene, DNA-binding protein family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004562" /db_xref="UniProtKB/Swiss-Prot:P76066" /db_xref="EcoGene:EG13365" gene 1292722..1293165 /gene="rzpR" /locus_tag="b1362" /gene_synonym="ECK1360" /gene_synonym="JW5212" /gene_synonym="Rz" /gene_synonym="ydaX" /pseudo /db_xref="EcoGene:EG13366" CDS 1292722..1293165 /gene="rzpR" /locus_tag="b1362" /gene_synonym="ECK1360" /gene_synonym="JW5212" /gene_synonym="Rz" /gene_synonym="ydaX" /note="pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004564" /db_xref="UniProtKB/Swiss-Prot:P77551" /db_xref="EcoGene:EG13366" gene 1292921..1293106 /gene="rzoR" /locus_tag="b4528" /gene_synonym="ECK1361" /gene_synonym="JW5213" /gene_synonym="Rz1" /db_xref="EcoGene:EG14381" CDS 1292921..1293106 /gene="rzoR" /locus_tag="b4528" /gene_synonym="ECK1361" /gene_synonym="JW5213" /gene_synonym="Rz1" /function="Phage or Prophage Related" /note="completely contained in another CDS; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="Rac prophage; putative lipoprotein" /protein_id="ABD18660.1" /db_xref="GI:87081890" /db_xref="ASAP:ABE-0285049" /db_xref="UniProtKB/Swiss-Prot:P58042" /db_xref="EcoGene:EG14381" /translation="MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPP DWQTPLNGIISPSGNDW" gene 1293303..1294760 /gene="trkG" /locus_tag="b1363" /gene_synonym="ECK1362" /gene_synonym="JW1358" /db_xref="EcoGene:EG11020" CDS 1293303..1294760 /gene="trkG" /locus_tag="b1363" /gene_synonym="ECK1362" /gene_synonym="JW1358" /function="transport; Transport of small molecules: Cations; Phage or Prophage Related" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="Rac prophage; potassium transporter subunit" /protein_id="AAC74445.1" /db_xref="GI:1787626" /db_xref="ASAP:ABE-0004567" /db_xref="UniProtKB/Swiss-Prot:P23849" /db_xref="EcoGene:EG11020" /translation="MNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFI TFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFI DALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGG AKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGI STVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIE LRFFLLIALGVIIVTSFQVWHIGMYDLHGSFIHSFFLASSMLTDNGLATQDYASWPTH TIVFLLLSSFFGGCIGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVT DRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFG VLNDIAKCLMCIAMILGRLEIYPVIILFSGFFWRS" gene 1294898..1295161 /gene="ynaK" /locus_tag="b1365" /gene_synonym="ECK1363" /gene_synonym="JW1359" /db_xref="EcoGene:EG14296" CDS 1294898..1295161 /gene="ynaK" /locus_tag="b1365" /gene_synonym="ECK1363" /gene_synonym="JW1359" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; conserved protein" /protein_id="AAC74447.1" /db_xref="GI:1787628" /db_xref="ASAP:ABE-0004571" /db_xref="UniProtKB/Swiss-Prot:P76068" /db_xref="EcoGene:EG14296" /translation="MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTN PVLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR" gene 1295151..1295603 /gene="ydaY" /locus_tag="b1366" /gene_synonym="ECK1364" /gene_synonym="JW1360" /pseudo /db_xref="EcoGene:EG13367" CDS 1295151..1295603 /gene="ydaY" /locus_tag="b1366" /gene_synonym="ECK1364" /gene_synonym="JW1360" /note="pseudogene, Rac prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004574" /db_xref="UniProtKB/Swiss-Prot:P76069" /db_xref="EcoGene:EG13367" gene 1295975..1296907 /gene="tmpR" /locus_tag="b1368" /gene_synonym="ECK1365" /gene_synonym="JW1361" /gene_synonym="ynaA" /pseudo /db_xref="EcoGene:EG13369" CDS 1295975..1296907 /gene="tmpR" /locus_tag="b1368" /gene_synonym="ECK1365" /gene_synonym="JW1361" /gene_synonym="ynaA" /note="Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004581" /db_xref="UniProtKB/Swiss-Prot:P77658" /db_xref="EcoGene:EG13369" gene join(1296910..1297119,1298317..1298505) /gene="lomR" /locus_tag="b4570" /gene_synonym="ECK1366" /gene_synonym="JW5884" /gene_synonym="JW5904" /pseudo /db_xref="EcoGene:EG14315" CDS join(1296910..1297119,1298317..1298505) /gene="lomR" /locus_tag="b4570" /gene_synonym="ECK1366" /gene_synonym="JW5884" /gene_synonym="JW5904" /note="pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004583" /db_xref="ASAP:ABE-0004590" /db_xref="ASAP:ABE-0285103" /db_xref="UniProtKB/Swiss-Prot:P77184" /db_xref="EcoGene:EG14315" mobile_element complement(1297120..1298315) /mobile_element_type="insertion sequence:IS5Y" gene complement(1297267..1298247) /gene="insH1" /locus_tag="b1370" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(1297267..1298247) /gene="insH1" /locus_tag="b1370" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC74452.1" /db_xref="GI:1787634" /db_xref="ASAP:ABE-0004586" /db_xref="UniProtKB/Swiss-Prot:P0CE53" /db_xref="EcoGene:EG40008" /translation="MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPF YPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDR TTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQR DPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVS ADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQNPRKNKTAINIEYMKASIRARVE HPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ" gene 1298570..1301932 /gene="stfR" /locus_tag="b1372" /gene_synonym="ECK1367" /gene_synonym="JW1366" /gene_synonym="ynaB" /db_xref="EcoGene:EG13370" CDS 1298570..1301932 /gene="stfR" /locus_tag="b1372" /gene_synonym="ECK1367" /gene_synonym="JW1366" /gene_synonym="ynaB" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; putative tail fiber protein" /protein_id="AAC74454.2" /db_xref="GI:87081892" /db_xref="ASAP:ABE-0004595" /db_xref="UniProtKB/Swiss-Prot:P76072" /db_xref="EcoGene:EG13370" /translation="MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPD EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEA LRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAG QAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSA ATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKT SETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSA STATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASS ASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAE DIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGAD IPDKGCFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELAS RVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNK GDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVI LDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKT YLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGV EFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYT GVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPS DTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGI KSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNT ASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGIGAHTHSVA IGSHGHTITVNAAGNAENTVKNIAFNYIVRLA" gene 1301932..1302507 /gene="tfaR" /locus_tag="b1373" /gene_synonym="ECK1368" /gene_synonym="JW1367" /gene_synonym="ynaC" /db_xref="EcoGene:EG13371" CDS 1301932..1302507 /gene="tfaR" /locus_tag="b1373" /gene_synonym="ECK1368" /gene_synonym="JW1367" /gene_synonym="ynaC" /function="Phage or Prophage Related" /note="tail fiber assembly protein homolog from lambdoid prophage Rac" /codon_start=1 /transl_table=11 /product="Rac prophage; putative tail fiber assembly protein" /protein_id="AAC74455.1" /db_xref="GI:1787637" /db_xref="ASAP:ABE-0004597" /db_xref="UniProtKB/Swiss-Prot:P77163" /db_xref="EcoGene:EG13371" /translation="MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTD IAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSP EGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEE ISLLEAWKKYRVLLNRVDTSTAQDIEWPALP" gene complement(1302605..1303195) /gene="pinR" /locus_tag="b1374" /gene_synonym="ECK1369" /gene_synonym="JW1368" /gene_synonym="ynaD" /db_xref="EcoGene:EG13372" CDS complement(1302605..1303195) /gene="pinR" /locus_tag="b1374" /gene_synonym="ECK1369" /gene_synonym="JW1368" /gene_synonym="ynaD" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Rac prophage; putative site-specific recombinase" /protein_id="AAC74456.1" /db_xref="GI:1787638" /db_xref="ASAP:ABE-0004599" /db_xref="UniProtKB/Swiss-Prot:P0ADI0" /db_xref="EcoGene:EG13372" /translation="MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGS AATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGG IDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVV FERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI" gene complement(1303512..1303745) /gene="ynaE" /locus_tag="b1375" /gene_synonym="ECK1370" /gene_synonym="JW1369" /db_xref="EcoGene:EG13373" CDS complement(1303512..1303745) /gene="ynaE" /locus_tag="b1375" /gene_synonym="ECK1370" /gene_synonym="JW1369" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="cold shock protein, Rac prophage" /protein_id="AAC74457.2" /db_xref="GI:345297173" /db_xref="ASAP:ABE-0004602" /db_xref="UniProtKB/Swiss-Prot:P76073" /db_xref="EcoGene:EG13373" /translation="MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYI EGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM" gene complement(1304479..1304529) /gene="ttcC" /locus_tag="b4638" /gene_synonym="ECK4447" /pseudo /db_xref="EcoGene:EG14435" CDS complement(1304479..1304529) /gene="ttcC" /locus_tag="b4638" /gene_synonym="ECK4447" /note="pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14435" gene complement(1304706..1305140) /gene="uspF" /locus_tag="b1376" /gene_synonym="ECK1371" /gene_synonym="JW1370" /gene_synonym="ynaF" /gene_synonym="yzzL" /db_xref="EcoGene:EG12674" CDS complement(1304706..1305140) /gene="uspF" /locus_tag="b1376" /gene_synonym="ECK1371" /gene_synonym="JW1370" /gene_synonym="ynaF" /gene_synonym="yzzL" /function="putative structure; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 8740179,9298646" /note="putative filament protein" /codon_start=1 /transl_table=11 /product="stress-induced protein, ATP-binding protein" /protein_id="AAC74458.2" /db_xref="GI:87081893" /db_xref="ASAP:ABE-0004605" /db_xref="UniProtKB/Swiss-Prot:P37903" /db_xref="EcoGene:EG12674" /translation="MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSL PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR" gene complement(1305281..1306414) /gene="ompN" /locus_tag="b1377" /gene_synonym="ECK1372" /gene_synonym="JW1371" /gene_synonym="ynaG" /db_xref="EcoGene:EG13375" CDS complement(1305281..1306414) /gene="ompN" /locus_tag="b1377" /gene_synonym="ECK1372" /gene_synonym="JW1371" /gene_synonym="ynaG" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane pore protein N, non-specific" /protein_id="AAC74459.1" /db_xref="GI:1787641" /db_xref="ASAP:ABE-0004608" /db_xref="UniProtKB/Swiss-Prot:P77747" /db_xref="EcoGene:EG13375" /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAY TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADIGATY YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF" gene 1306642..1306750 /gene="micC" /locus_tag="b4427" /gene_synonym="ECK1373" /gene_synonym="IS063" /gene_synonym="JWR0234" /gene_synonym="tke8" /db_xref="EcoGene:EG31144" ncRNA 1306642..1306750 /ncRNA_class="antisense_RNA" /gene="micC" /locus_tag="b4427" /gene_synonym="ECK1373" /gene_synonym="IS063" /gene_synonym="JWR0234" /gene_synonym="tke8" /product="sRNA antisense regulator of OmpC translation, Hfq-dependent" /note="regulatory antisense RNA affecting ompC expression" /db_xref="ASAP:ABE-0047248" /db_xref="EcoGene:EG31144" gene complement(1306781..1310305) /gene="pfo" /locus_tag="b1378" /gene_synonym="ECK1374" /gene_synonym="JW1372" /gene_synonym="nifJ" /gene_synonym="soi-9" /gene_synonym="ydbK" /db_xref="EcoGene:EG13183" CDS complement(1306781..1310305) /gene="pfo" /locus_tag="b1378" /gene_synonym="ECK1374" /gene_synonym="JW1372" /gene_synonym="nifJ" /gene_synonym="soi-9" /gene_synonym="ydbK" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="pyruvate-flavodoxin oxidoreductase" /protein_id="AAC74460.1" /db_xref="GI:1787642" /db_xref="ASAP:ABE-0004613" /db_xref="UniProtKB/Swiss-Prot:P52647" /db_xref="EcoGene:EG13183" /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISQIATLKSR VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQVEIDAHRARALNPEHPVIRGTSANP DTYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAE PLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF TVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF FHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHS ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL TATGFWPLYRFDPRRADEGKLPLALDSRPPSEAPEETLLHEQRFRRLNSQQPEVAEQL WKDAAADLQKRYDFLAQMAGKAEKSNTD" gene 1310579..1310845 /gene="ydbJ" /locus_tag="b4529" /gene_synonym="ECK1375" /gene_synonym="JW5215" /db_xref="EcoGene:EG13182" CDS 1310579..1310845 /gene="ydbJ" /locus_tag="b4529" /gene_synonym="ECK1375" /gene_synonym="JW5215" /note="GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="DUF333 family putative lipoprotein" /protein_id="ABD18661.1" /db_xref="GI:87081894" /db_xref="ASAP:ABE-0285050" /db_xref="UniProtKB/Swiss-Prot:P0ACW2" /db_xref="EcoGene:EG13182" /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY" gene complement(1310842..1311264) /gene="hslJ" /locus_tag="b1379" /gene_synonym="ECK1376" /gene_synonym="JW1374" /gene_synonym="ydbI" /db_xref="EcoGene:EG13181" CDS complement(1310842..1311264) /gene="hslJ" /locus_tag="b1379" /gene_synonym="ECK1376" /gene_synonym="JW1374" /gene_synonym="ydbI" /function="factor; Adaptations, atypical conditions" /note="heat shock protein hslJ; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="heat-inducible lipoprotein involved in novobiocin resistance" /protein_id="AAC74461.1" /db_xref="GI:1787644" /db_xref="ASAP:ABE-0004616" /db_xref="UniProtKB/Swiss-Prot:P52644" /db_xref="EcoGene:EG13181" /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN" gene complement(1311375..1312364) /gene="ldhA" /locus_tag="b1380" /gene_synonym="ECK1377" /gene_synonym="hslF" /gene_synonym="hslI" /gene_synonym="htpH" /gene_synonym="JW1375" /db_xref="EcoGene:EG13186" CDS complement(1311375..1312364) /gene="ldhA" /locus_tag="b1380" /gene_synonym="ECK1377" /gene_synonym="hslF" /gene_synonym="hslI" /gene_synonym="htpH" /gene_synonym="JW1375" /EC_number="1.1.1.28" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="fermentative D-lactate dehydrogenase, NAD-dependent" /protein_id="AAC74462.1" /db_xref="GI:1787645" /db_xref="ASAP:ABE-0004619" /db_xref="UniProtKB/Swiss-Prot:P52643" /db_xref="EcoGene:EG13186" /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEA AFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV" gene 1312572..1315211 /gene="ydbH" /locus_tag="b1381" /gene_synonym="ECK1378" /gene_synonym="JW1376" /db_xref="EcoGene:EG13180" CDS 1312572..1315211 /gene="ydbH" /locus_tag="b1381" /gene_synonym="ECK1378" /gene_synonym="JW1376" /codon_start=1 /transl_table=11 /product="putative membrane-anchored protein, function unknown" /protein_id="AAC74463.1" /db_xref="GI:1787646" /db_xref="ASAP:ABE-0004623" /db_xref="UniProtKB/Swiss-Prot:P52645" /db_xref="EcoGene:EG13180" /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL PQTEQSPAAPKTLAQWQAMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE KVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFAMPLVPDGLPVSGHATATLNLPQ EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS GRLGVKVDNWQAGLENALVSGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG EAKQADLILYARLPAQLSGSLSDPTLTFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPIVWVRDAQHPSFSGAL SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS RSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA WLEQNARLPGNDCPQGKECEEKQ" gene 1315208..1315393 /gene="ynbE" /locus_tag="b1382" /gene_synonym="ECK1379" /gene_synonym="JW1377" /db_xref="EcoGene:EG14298" CDS 1315208..1315393 /gene="ynbE" /locus_tag="b1382" /gene_synonym="ECK1379" /gene_synonym="JW1377" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC74464.1" /db_xref="GI:1787647" /db_xref="ASAP:ABE-0004625" /db_xref="UniProtKB/Swiss-Prot:P64448" /db_xref="EcoGene:EG14298" /translation="MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIII KADKDVEELLETRSDLF" gene 1315401..1315727 /gene="ydbL" /locus_tag="b1383" /gene_synonym="ECK1380" /gene_synonym="JW5216" /db_xref="EcoGene:EG13733" CDS 1315401..1315727 /gene="ydbL" /locus_tag="b1383" /gene_synonym="ECK1380" /gene_synonym="JW5216" /codon_start=1 /transl_table=11 /product="DUF1318 family protein" /protein_id="AAC74465.2" /db_xref="GI:87081895" /db_xref="ASAP:ABE-0004627" /db_xref="UniProtKB/Swiss-Prot:P76076" /db_xref="EcoGene:EG13733" /translation="MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVAL KTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGING KWVRKF" gene complement(1315899..1316804) /gene="feaR" /locus_tag="b1384" /gene_synonym="ECK1381" /gene_synonym="JW1379" /gene_synonym="maoB" /gene_synonym="maoR" /gene_synonym="maoX" /gene_synonym="ydbM" /db_xref="EcoGene:EG13422" CDS complement(1315899..1316804) /gene="feaR" /locus_tag="b1384" /gene_synonym="ECK1381" /gene_synonym="JW1379" /gene_synonym="maoB" /gene_synonym="maoR" /gene_synonym="maoX" /gene_synonym="ydbM" /function="regulator; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 8631685" /note="regulatory protein for 2-phenylethylamine catabolism; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator for tynA and feaB" /protein_id="AAC74466.1" /db_xref="GI:1787649" /db_xref="ASAP:ABE-0004630" /db_xref="UniProtKB/Swiss-Prot:Q47129" /db_xref="EcoGene:EG13422" /translation="MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGL KLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA SRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMN NPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEW IAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFS DQSHFSTVFKQRFGMTPGEYRRKFR" gene 1317040..1318539 /gene="feaB" /locus_tag="b1385" /gene_synonym="ECK1382" /gene_synonym="JW1380" /gene_synonym="padA" /gene_synonym="ydbG" /db_xref="EcoGene:EG13179" CDS 1317040..1318539 /gene="feaB" /locus_tag="b1385" /gene_synonym="ECK1382" /gene_synonym="JW1380" /gene_synonym="padA" /gene_synonym="ydbG" /EC_number="1.2.1.39" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 9043126,9109378" /note="GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="phenylacetaldehyde dehydrogenase" /protein_id="AAC74467.2" /db_xref="GI:87081896" /db_xref="ASAP:ABE-0004637" /db_xref="UniProtKB/Swiss-Prot:P80668" /db_xref="EcoGene:EG13179" /translation="MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPAT GQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELA QLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTR KEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGI PDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGK NPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQ VGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVN PDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRL QAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVRY" gene complement(1318597..1320870) /gene="tynA" /locus_tag="b1386" /gene_synonym="ECK1383" /gene_synonym="JW1381" /gene_synonym="maoA" /db_xref="EcoGene:EG13140" CDS complement(1318597..1320870) /gene="tynA" /locus_tag="b1386" /gene_synonym="ECK1383" /gene_synonym="JW1381" /gene_synonym="maoA" /EC_number="1.4.3.21" /function="enzyme; Degradation of small molecules: Amines" /note="copper amine oxidase (tyramine oxidase); GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="tyramine oxidase, copper-requiring" /protein_id="AAC74468.1" /db_xref="GI:1787651" /db_xref="ASAP:ABE-0004639" /db_xref="UniProtKB/Swiss-Prot:P46883" /db_xref="EcoGene:EG13140" /translation="MGSPSLYSARKTTLALAVALSFAWQAPVFAHGGEAHMVPMDKTL KEFGADVQWDDYAQLFTLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSD TFINDVFQSGLDQTFQVEKRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLP PDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVL LDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVI SYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTARPFDGRDRVAPAVK PMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSL GGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVP MEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWISTVGNYDYIFDWIFHENG TIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDV DGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNPNKE NRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEG KYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKP WNFFDETPTLGALKKDK" gene complement(1321118..1323163) /gene="paaZ" /locus_tag="b1387" /gene_synonym="ECK1384" /gene_synonym="JW1382" /gene_synonym="maoC" /gene_synonym="tynP?" /gene_synonym="ydbN" /db_xref="EcoGene:EG13735" CDS complement(1321118..1323163) /gene="paaZ" /locus_tag="b1387" /gene_synonym="ECK1384" /gene_synonym="JW1382" /gene_synonym="maoC" /gene_synonym="tynP?" /gene_synonym="ydbN" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="oxepin-CoA hydrolase and 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase" /protein_id="AAC74469.1" /db_xref="GI:1787653" /db_xref="ASAP:ABE-0004644" /db_xref="UniProtKB/Swiss-Prot:P77455" /db_xref="EcoGene:EG13735" /translation="MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAA RQFAIEKGAPALRAMTFIERAAMLKAVAKHLLSEKERFYALSAQTGATRADSWVDIEG GIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINAFNFP CWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDL LDHLDSQDVVTFTGSAATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEF ALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSDALVARLQKVVVGDPAQEGVKM GALVNAEQRADVQEKVNILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPAVH ATEAFGPVATLMPAQNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQ ILNEESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRAVKHYMQRTAVQGSPTMLAA ISKQWVRGAKVEEDRIHPFRKYFEELQPGDSLLTPRRTMTEADIVNFACLSGDHFYAH MDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTI QVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQHQTPVALYSILTLVARQHGDFVD" gene 1323448..1324377 /gene="paaA" /locus_tag="b1388" /gene_synonym="ECK1385" /gene_synonym="JW1383" /gene_synonym="ydbO" /db_xref="EcoGene:EG13736" CDS 1323448..1324377 /gene="paaA" /locus_tag="b1388" /gene_synonym="ECK1385" /gene_synonym="JW1383" /gene_synonym="ydbO" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="ring 1,2-phenylacetyl-CoA epoxidase subunit" /protein_id="AAC74470.1" /db_xref="GI:1787654" /db_xref="ASAP:ABE-0004649" /db_xref="UniProtKB/Swiss-Prot:P76077" /db_xref="EcoGene:EG13736" /translation="MTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIV GMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRM KYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQR QGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTN DELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQ ERLDAKRKAWEEGTWVREAALAHAQKQHARKVA" gene 1324389..1324676 /gene="paaB" /locus_tag="b1389" /gene_synonym="ECK1386" /gene_synonym="JW1384" /gene_synonym="ynbF" /db_xref="EcoGene:EG14299" CDS 1324389..1324676 /gene="paaB" /locus_tag="b1389" /gene_synonym="ECK1386" /gene_synonym="JW1384" /gene_synonym="ynbF" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative ring 1,2-phenylacetyl-CoA epoxidase subunit" /protein_id="AAC74471.1" /db_xref="GI:1787655" /db_xref="ASAP:ABE-0004651" /db_xref="UniProtKB/Swiss-Prot:P76078" /db_xref="EcoGene:EG14299" /translation="MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYT RRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM" gene 1324685..1325431 /gene="paaC" /locus_tag="b1390" /gene_synonym="ECK1387" /gene_synonym="JW1385" /gene_synonym="ydbP" /db_xref="EcoGene:EG13737" CDS 1324685..1325431 /gene="paaC" /locus_tag="b1390" /gene_synonym="ECK1387" /gene_synonym="JW1385" /gene_synonym="ydbP" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="ring 1,2-phenylacetyl-CoA epoxidase subunit" /protein_id="AAC74472.1" /db_xref="GI:1787656" /db_xref="ASAP:ABE-0004653" /db_xref="UniProtKB/Swiss-Prot:P76079" /db_xref="EcoGene:EG13737" /translation="MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLD LLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDA WHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAIN KLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRT GGKKGLHTEHLGPMLAEMQYLQRVLPGQQW" gene 1325446..1325943 /gene="paaD" /locus_tag="b1391" /gene_synonym="ECK1388" /gene_synonym="JW5217" /gene_synonym="ydbQ" /db_xref="EcoGene:EG13738" CDS 1325446..1325943 /gene="paaD" /locus_tag="b1391" /gene_synonym="ECK1388" /gene_synonym="JW5217" /gene_synonym="ydbQ" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="ring 1,2-phenylacetyl-CoA epoxidase subunit" /protein_id="AAC74473.4" /db_xref="GI:226510939" /db_xref="ASAP:ABE-0004655" /db_xref="UniProtKB/Swiss-Prot:P76080" /db_xref="EcoGene:EG13738" /translation="MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQM GEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTPVQVVLQLDPAWTTDWMTPDARE RLREYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD YFKCI" gene 1325951..1327021 /gene="paaE" /locus_tag="b1392" /gene_synonym="ECK1389" /gene_synonym="JW1387" /gene_synonym="ydbR" /db_xref="EcoGene:EG13739" CDS 1325951..1327021 /gene="paaE" /locus_tag="b1392" /gene_synonym="ECK1389" /gene_synonym="JW1387" /gene_synonym="ydbR" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component" /protein_id="AAC74474.1" /db_xref="GI:1787658" /db_xref="ASAP:ABE-0004657" /db_xref="UniProtKB/Swiss-Prot:P76081" /db_xref="EcoGene:EG13739" /translation="MTTFHSLTVAKVESETRDAVTITFAVPQPLQEAYRFRPGQHLTL KASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGH FGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQA LADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGP AAMMDDAETALKALGMPDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIV LNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYV LSCQALPLTSDVVVDFDAKGMA" gene 1327018..1327785 /gene="paaF" /locus_tag="b1393" /gene_synonym="ECK1390" /gene_synonym="JW1388" /gene_synonym="ydbR" /db_xref="EcoGene:EG13740" CDS 1327018..1327785 /gene="paaF" /locus_tag="b1393" /gene_synonym="ECK1390" /gene_synonym="JW1388" /gene_synonym="ydbR" /EC_number="4.2.1.17" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2,3-dehydroadipyl-CoA hydratase" /protein_id="AAC74475.1" /db_xref="GI:1787659" /db_xref="ASAP:ABE-0004659" /db_xref="UniProtKB/Swiss-Prot:P76082" /db_xref="EcoGene:EG13740" /translation="MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATD TSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGY ALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSG ESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQ AGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFKGR" gene 1327785..1328573 /gene="paaG" /locus_tag="b1394" /gene_synonym="ECK1391" /gene_synonym="JW1389" /gene_synonym="ydbT" /db_xref="EcoGene:EG13741" CDS 1327785..1328573 /gene="paaG" /locus_tag="b1394" /gene_synonym="ECK1391" /gene_synonym="JW1389" /gene_synonym="ydbT" /EC_number="4.2.1.17" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming" /protein_id="AAC74476.1" /db_xref="GI:1787660" /db_xref="ASAP:ABE-0004661" /db_xref="UniProtKB/Swiss-Prot:P77467" /db_xref="EcoGene:EG13741" /translation="MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVER DDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPV ICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINS AETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFTGK" gene 1328575..1330002 /gene="paaH" /locus_tag="b1395" /gene_synonym="ECK1392" /gene_synonym="JW1390" /gene_synonym="ydbU" /db_xref="EcoGene:EG13742" CDS 1328575..1330002 /gene="paaH" /locus_tag="b1395" /gene_synonym="ECK1392" /gene_synonym="JW1390" /gene_synonym="ydbU" /EC_number="1.1.1.157" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent" /protein_id="AAC74477.1" /db_xref="GI:1787661" /db_xref="ASAP:ABE-0004663" /db_xref="UniProtKB/Swiss-Prot:P76083" /db_xref="EcoGene:EG13742" /translation="MMINVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRA IDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALAAADLVIEAASERLEVKKAL FAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLA TAAEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDA ALRDGAGFPMGPLELTDLIGQDVNFAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGK KSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLLIETQGETAQALA IRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWR TVAMIINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQH HYGEERYRPCSLLRQRALLESGYES" gene 1329992..1330414 /gene="paaI" /locus_tag="b1396" /gene_synonym="ECK1393" /gene_synonym="JW1391" /gene_synonym="ydbV" /db_xref="EcoGene:EG13743" CDS 1329992..1330414 /gene="paaI" /locus_tag="b1396" /gene_synonym="ECK1393" /gene_synonym="JW1391" /gene_synonym="ydbV" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="hydroxyphenylacetyl-CoA thioesterase" /protein_id="AAC74478.1" /db_xref="GI:1787662" /db_xref="ASAP:ABE-0004666" /db_xref="UniProtKB/Swiss-Prot:P76084" /db_xref="EcoGene:EG13743" /translation="MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQM LNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRH QGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA" gene 1330414..1331619 /gene="paaJ" /locus_tag="b1397" /gene_synonym="ECK1394" /gene_synonym="JW1392" /gene_synonym="ydbW" /db_xref="EcoGene:EG13744" CDS 1330414..1331619 /gene="paaJ" /locus_tag="b1397" /gene_synonym="ECK1394" /gene_synonym="JW1392" /gene_synonym="ydbW" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase" /protein_id="AAC74479.1" /db_xref="GI:1787663" /db_xref="ASAP:ABE-0004668" /db_xref="UniProtKB/Swiss-Prot:P0C7L2" /db_xref="EcoGene:EG13744" /translation="MREAFICDGIRTPIGRYGGALSSVRADDLAAIPLRELLVRNPRL DAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAAR AIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGT DSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVT EIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGL TPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVL RELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQ GIAMILERV" gene 1331646..1332959 /gene="paaK" /locus_tag="b1398" /gene_synonym="ECK1395" /gene_synonym="JW5218" /db_xref="EcoGene:EG13745" CDS 1331646..1332959 /gene="paaK" /locus_tag="b1398" /gene_synonym="ECK1395" /gene_synonym="JW5218" /EC_number="6.2.1.30" /function="enzyme; Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="phenylacetyl-CoA ligase" /protein_id="AAC74480.1" /db_xref="GI:1787664" /db_xref="ASAP:ABE-0004671" /db_xref="UniProtKB/Swiss-Prot:P76085" /db_xref="EcoGene:EG13745" /translation="MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKF DAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTV VGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIP MSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPW TQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDG TPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLII RGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQV CHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA" gene 1333060..1334010 /gene="paaX" /locus_tag="b1399" /gene_synonym="ECK1396" /gene_synonym="JW1394" /gene_synonym="ydbY" /db_xref="EcoGene:EG13746" CDS 1333060..1334010 /gene="paaX" /locus_tag="b1399" /gene_synonym="ECK1396" /gene_synonym="JW1394" /gene_synonym="ydbY" /function="regualtor: Phenylacetic acid degradation" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer" /protein_id="AAC74481.1" /db_xref="GI:1787666" /db_xref="ASAP:ABE-0004674" /db_xref="UniProtKB/Swiss-Prot:P76086" /db_xref="EcoGene:EG13746" /translation="MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLA ALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAE QPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEA GVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAAD ELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAAL AFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR" gene 1333992..1334582 /gene="paaY" /locus_tag="b1400" /gene_synonym="ECK1397" /gene_synonym="JW1395" /gene_synonym="ydbZ" /db_xref="EcoGene:EG13747" CDS 1333992..1334582 /gene="paaY" /locus_tag="b1400" /gene_synonym="ECK1397" /gene_synonym="JW1395" /gene_synonym="ydbZ" /function="enzyme; Phenylacetic acid degradation" /codon_start=1 /transl_table=11 /product="thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein" /protein_id="AAC74482.1" /db_xref="GI:1787667" /db_xref="ASAP:ABE-0004676" /db_xref="UniProtKB/Swiss-Prot:P77181" /db_xref="EcoGene:EG13747" /translation="MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLR GDFGRIVVKDGANIQDNCVMHGFPEQDTVVGEDGHIGHSAILHGCIIRRNALVGMNAV VMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQ VLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPKQ" gene complement(1334686..1334751) /gene="ynbG" /locus_tag="b4674" /gene_synonym="ECK4489" /db_xref="EcoGene:EG14479" CDS complement(1334686..1334751) /gene="ynbG" /locus_tag="b4674" /gene_synonym="ECK4489" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO59992.1" /db_xref="GI:226510940" /db_xref="UniProtKB/Swiss-Prot:C1P600" /db_xref="EcoGene:EG14479" /translation="MKYINCVYNINYKLKPHSHYK" gene join(1334913..1337425,1338762..1338814,1340038..1343534) /gene="ydbA" /locus_tag="b4492" /gene_synonym="ECK1398" /gene_synonym="JW1402" /gene_synonym="JW5802" /pseudo /db_xref="EcoGene:EG11307" CDS join(1334913..1337425,1338762..1338814,1340038..1343534) /gene="ydbA" /locus_tag="b4492" /gene_synonym="ECK1398" /gene_synonym="JW1402" /gene_synonym="JW5802" /note="pseudogene, autotransporter homolog; interrupted by IS2 and IS30" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004680" /db_xref="ASAP:ABE-0004694" /db_xref="ASAP:ABE-0285093" /db_xref="UniProtKB/Swiss-Prot:P33666" /db_xref="EcoGene:EG11307" mobile_element complement(1337431..1338761) /mobile_element_type="insertion sequence:IS2D" gene complement(1337442..1338347) /gene="insD1" /locus_tag="b1402" /gene_synonym="ECK0358" /db_xref="EcoGene:EG40004" CDS complement(1337442..1338347) /gene="insD1" /locus_tag="b1402" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="AAC74484.1" /db_xref="GI:1787669" /db_xref="ASAP:ABE-0004683" /db_xref="UniProtKB/Swiss-Prot:P0CF54" /db_xref="EcoGene:EG40004" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(1338305..1338670) /gene="insC1" /locus_tag="b1403" /gene_synonym="ECK0357" /db_xref="EcoGene:EG40003" CDS complement(1338305..1338670) /gene="insC1" /locus_tag="b1403" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="AAC74485.2" /db_xref="GI:145693126" /db_xref="ASAP:ABE-0004685" /db_xref="UniProtKB/Swiss-Prot:P0CF41" /db_xref="EcoGene:EG40003" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" mobile_element 1338817..1340037 /mobile_element_type="insertion sequence:IS30C" gene 1338879..1340030 /gene="insI1" /locus_tag="b1404" /gene_synonym="ECK0258" /db_xref="EcoGene:EG40009" CDS 1338879..1340030 /gene="insI1" /locus_tag="b1404" /gene_synonym="ECK0258" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS30 transposase" /protein_id="AAC74486.1" /db_xref="GI:1787671" /db_xref="ASAP:ABE-0004691" /db_xref="UniProtKB/Swiss-Prot:P0CF89" /db_xref="EcoGene:EG40009" /translation="MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDT GGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRR YYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPI HERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALT DKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIR QYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD" gene 1343742..1344602 /gene="ydbC" /locus_tag="b1406" /gene_synonym="ECK1399" /gene_synonym="JW1403" /db_xref="EcoGene:EG11309" CDS 1343742..1344602 /gene="ydbC" /locus_tag="b1406" /gene_synonym="ECK1399" /gene_synonym="JW1403" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="putative NAD(P)-binding oxidoreductase" /protein_id="AAC74488.1" /db_xref="GI:1787674" /db_xref="ASAP:ABE-0004698" /db_xref="UniProtKB/Swiss-Prot:P25906" /db_xref="EcoGene:EG11309" /translation="MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLRE ALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPA ELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIG LSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHDGIAYVPFFPLGGFTPL QSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEV LSTLDGISRE" gene 1344665..1346971 /gene="ydbD" /locus_tag="b1407" /gene_synonym="ECK1400" /gene_synonym="JW5221" /db_xref="EcoGene:EG11310" CDS 1344665..1346971 /gene="ydbD" /locus_tag="b1407" /gene_synonym="ECK1400" /gene_synonym="JW5221" /codon_start=1 /transl_table=11 /product="PF10971 family putative periplasmic methylglyoxal resistance protein" /protein_id="AAC74489.2" /db_xref="GI:87081900" /db_xref="ASAP:ABE-0004701" /db_xref="UniProtKB/Swiss-Prot:P25907" /db_xref="EcoGene:EG11310" /translation="MLKARNCGWIRLLPLFMLSLPVQAELRCVANAVDIESFFSAATA EDKQQVEQAINSSVNLVPFGLSASNWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNIS TFSLSNPWVILGNVTATNIVADSPLLITGSINASGLVFIDSYYDNPSTIKGSINARGI FINDIIAPVVASSTNSEFMVRASDKHDTENVKKALMIINPDAYYWGLINDEDALKEIF KRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGKVAAFEGRDIATFDLAVMR TLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDRE PLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPES IIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLLRM TPQESDKVAGYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQVI HSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALSHRKNNPKADSDAYETS ADMILSELISHGEVDDQMLLNATALIRSDDWDFLESALISWDNLPAVVLKELQQNTPR NDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNLT FFKFGALNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPE LDLVRQLALNGKTRAIREQAMRKLDELY" gene 1347142..1347747 /gene="ynbA" /locus_tag="b1408" /gene_synonym="ECK1401" /gene_synonym="JW1405" /db_xref="EcoGene:EG13748" CDS 1347142..1347747 /gene="ynbA" /locus_tag="b1408" /gene_synonym="ECK1401" /gene_synonym="JW1405" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC74490.2" /db_xref="GI:87081901" /db_xref="ASAP:ABE-0004704" /db_xref="UniProtKB/Swiss-Prot:P76090" /db_xref="EcoGene:EG13748" /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGL LLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY LPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGL AVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI" gene 1347747..1348643 /gene="ynbB" /locus_tag="b1409" /gene_synonym="ECK1402" /gene_synonym="JW1406" /db_xref="EcoGene:EG13749" CDS 1347747..1348643 /gene="ynbB" /locus_tag="b1409" /gene_synonym="ECK1402" /gene_synonym="JW1406" /function="putative enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="putative phosphatidate cytidiltransferase; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="putative CDP-diglyceride synthase" /protein_id="AAC74491.1" /db_xref="GI:1787677" /db_xref="ASAP:ABE-0004706" /db_xref="UniProtKB/Swiss-Prot:P76091" /db_xref="EcoGene:EG13749" /translation="MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWG IVICFSMVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWGIPLNYLLIGFNC FELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPT TNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMI ASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLL DRIDSLIFTAPVFFYFIRYCCY" gene 1348659..1350416 /gene="ynbC" /locus_tag="b1410" /gene_synonym="ECK1403" /gene_synonym="JW1407" /db_xref="EcoGene:EG13750" CDS 1348659..1350416 /gene="ynbC" /locus_tag="b1410" /gene_synonym="ECK1403" /gene_synonym="JW1407" /codon_start=1 /transl_table=11 /product="putative esterase" /protein_id="AAC74492.1" /db_xref="GI:1787678" /db_xref="ASAP:ABE-0004708" /db_xref="UniProtKB/Swiss-Prot:P76092" /db_xref="EcoGene:EG13750" /translation="MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHE HSGRLQHLVDELAMPDTAFYAWDARGHGKSSGPRGYSPSLARSVRDVDEFVRFAASDS QVGLEEVVVIAQSVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR LRGLFFINSYVKGRYLTHDRQRGASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAI TLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQ SFISRLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGT HSSGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQ ILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQE MIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLAN AIEPGGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDAGFDKCT QRIDEWGIFTVSMAVRRDN" gene 1350430..1351722 /gene="ynbD" /locus_tag="b1411" /gene_synonym="ECK1404" /gene_synonym="JW1408" /db_xref="EcoGene:EG13751" CDS 1350430..1351722 /gene="ynbD" /locus_tag="b1411" /gene_synonym="ECK1404" /gene_synonym="JW1408" /function="putative enzyme; Not classified" /note="putative enzymes" /codon_start=1 /transl_table=11 /product="putative phosphatase inner membrane protein" /protein_id="AAC74493.1" /db_xref="GI:1787679" /db_xref="ASAP:ABE-0004710" /db_xref="UniProtKB/Swiss-Prot:P76093" /db_xref="EcoGene:EG13751" /translation="MLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDIPSQVFGWE TAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCGFLLYPLKF SFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAERWRKVCGGW FLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVVG AGSCIVLMELMMMIQLWWSVWLCWPVLSLLIIGRGYGGLGAITTGKDSQGKLPPAVYW LTLPCRIGMWLSMRWFCRRLEPVSKMTAGVYLGAFPRHIPAQNAVLDVTFEFPRGRAT KDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVVAAWLL CYGHCKTVNEAISYIRARRPQIVLTDEHKAMLRLWENR" gene complement(1351776..1352381) /gene="azoR" /locus_tag="b1412" /gene_synonym="acpD" /gene_synonym="ECK1405" /gene_synonym="JW1409" /db_xref="EcoGene:EG12695" CDS complement(1351776..1352381) /gene="azoR" /locus_tag="b1412" /gene_synonym="acpD" /gene_synonym="ECK1405" /gene_synonym="JW1409" /EC_number="3.1.4.14" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="acyl carrier protein phosphodiesterase" /codon_start=1 /transl_table=11 /product="NADH-azoreductase, FMN-dependent" /protein_id="AAC74494.1" /db_xref="GI:1787680" /db_xref="ASAP:ABE-0004712" /db_xref="UniProtKB/Swiss-Prot:P41407" /db_xref="EcoGene:EG12695" /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA" gene 1352582..1356484 /gene="hrpA" /locus_tag="b1413" /gene_synonym="ECK1406" /gene_synonym="JW5905" /db_xref="EcoGene:EG12936" CDS 1352582..1356484 /gene="hrpA" /locus_tag="b1413" /gene_synonym="ECK1406" /gene_synonym="JW5905" /function="enzyme; DNA - replication, repair, restriction/modification" /note="helicase, ATP-dependent; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase" /protein_id="AAC74495.2" /db_xref="GI:145693127" /db_xref="ASAP:ABE-0004718" /db_xref="UniProtKB/Swiss-Prot:P43329" /db_xref="EcoGene:EG12936" /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ AIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV RRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK LPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELN DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG" gene 1356756..1357556 /gene="ydcF" /locus_tag="b1414" /gene_synonym="ECK1407" /gene_synonym="JW1411" /db_xref="EcoGene:EG12110" CDS 1356756..1357556 /gene="ydcF" /locus_tag="b1414" /gene_synonym="ECK1407" /gene_synonym="JW1411" /codon_start=1 /transl_table=11 /product="DUF218 superfamily protein, SAM-binding" /protein_id="AAC74496.1" /db_xref="GI:1787683" /db_xref="ASAP:ABE-0004722" /db_xref="UniProtKB/Swiss-Prot:P34209" /db_xref="EcoGene:EG12110" /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTM ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLR" gene 1357753..1359192 /gene="aldA" /locus_tag="b1415" /gene_synonym="ald" /gene_synonym="ECK1408" /gene_synonym="JW1412" /db_xref="EcoGene:EG10035" CDS 1357753..1359192 /gene="aldA" /locus_tag="b1415" /gene_synonym="ald" /gene_synonym="ECK1408" /gene_synonym="JW1412" /EC_number="1.2.1.22" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="aldehyde dehydrogenase, NAD-linked; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009438 - methylglyoxal metabolic process; GO_process: GO:0006113 - fermentation; GO_process: GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase A, NAD-linked" /protein_id="AAC74497.1" /db_xref="GI:1787684" /db_xref="ASAP:ABE-0004725" /db_xref="UniProtKB/Swiss-Prot:P25553" /db_xref="EcoGene:EG10035" /translation="MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAE DARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIA RKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAG NPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDS RVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAAL ERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVV AFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHA GWRKSGIGGADGKHGLHEYLQTQVVYLQS" repeat_region 1359204..1359225 /note="REP116 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1359234..1360234) /gene="gapC" /locus_tag="b4493" /gene_synonym="ECK1409" /gene_synonym="JW1413" /gene_synonym="JW5906" /pseudo /db_xref="EcoGene:EG12103" CDS complement(join(1359234..1359485,1359485..1360234)) /gene="gapC" /locus_tag="b4493" /gene_synonym="ECK1409" /gene_synonym="JW1413" /gene_synonym="JW5906" /note="pseudogene, GAP dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase (second fragment)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004727" /db_xref="ASAP:ABE-0004729" /db_xref="ASAP:ABE-0285094" /db_xref="UniProtKB/Swiss-Prot:P33898" /db_xref="EcoGene:EG12103" gene 1360423..1360953 /gene="cybB" /locus_tag="b1418" /gene_synonym="ECK1410" /gene_synonym="JW5224" /db_xref="EcoGene:EG10172" CDS 1360423..1360953 /gene="cybB" /locus_tag="b1418" /gene_synonym="ECK1410" /gene_synonym="JW5224" /function="enzyme; Energy metabolism, carbon: Electron transport" /note="GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="cytochrome b561" /protein_id="AAC74500.2" /db_xref="GI:87081903" /db_xref="ASAP:ABE-0004733" /db_xref="UniProtKB/Swiss-Prot:P0ABE5" /db_xref="EcoGene:EG10172" /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY FWKDNTLLRMMPRKRS" gene complement(1360964..1361027) /gene="rydC" /locus_tag="b4597" /gene_synonym="ECK4407" /gene_synonym="IS067" /db_xref="EcoGene:EG31168" ncRNA complement(1360964..1361027) /ncRNA_class="antisense_RNA" /gene="rydC" /locus_tag="b4597" /gene_synonym="ECK4407" /gene_synonym="IS067" /product="sRNA antisense regulator of csgD and yejABEF, Hfq-dependent" /db_xref="EcoGene:EG31168" gene 1361198..1361371 /gene="ydcA" /locus_tag="b1419" /gene_synonym="ECK1411" /gene_synonym="JW1416" /db_xref="EcoGene:EG11219" CDS 1361198..1361371 /gene="ydcA" /locus_tag="b1419" /gene_synonym="ECK1411" /gene_synonym="JW1416" /codon_start=1 /transl_table=11 /product="putative periplasmic protein" /protein_id="AAC74501.1" /db_xref="GI:1787688" /db_xref="ASAP:ABE-0004736" /db_xref="UniProtKB/Swiss-Prot:P0ACW4" /db_xref="EcoGene:EG11219" /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN DGSISASKKTCTN" gene complement(1361443..1361592) /gene="hokB" /locus_tag="b4428" /gene_synonym="ECK1412" /gene_synonym="JW5225" /gene_synonym="ydcB" /db_xref="EcoGene:EG11240" CDS complement(1361443..1361592) /gene="hokB" /locus_tag="b4428" /gene_synonym="ECK1412" /gene_synonym="JW5225" /gene_synonym="ydcB" /note="small toxic membrane polypeptide" /codon_start=1 /transl_table=11 /product="toxic polypeptide, small" /protein_id="AAT48130.1" /db_xref="GI:48994884" /db_xref="ASAP:ABE-0047283" /db_xref="UniProtKB/Swiss-Prot:P77494" /db_xref="EcoGene:EG11240" /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM ACTSR" gene complement(1361483..1361650) /gene="mokB" /locus_tag="b1420" /gene_synonym="ECK1413" /gene_synonym="JW5882" /db_xref="EcoGene:EG20260" CDS complement(1361483..1361650) /gene="mokB" /locus_tag="b1420" /gene_synonym="ECK1413" /gene_synonym="JW5882" /note="regulatory peptide whose translation enables hokB expression" /codon_start=1 /transl_table=11 /product="regulatory peptide" /protein_id="AAC74502.1" /db_xref="GI:1787689" /db_xref="ASAP:ABE-0004738" /db_xref="UniProtKB/Swiss-Prot:P76096" /db_xref="EcoGene:EG20260" /translation="MNLAIQILASYPPSGKEKGYEAQPSGGVSAHYLHYDSDIHTPDP TNALRTAVPGR" gene 1361640..1361695 /gene="sokB" /locus_tag="b4429" /gene_synonym="ECK1414" /gene_synonym="JWR0235" /db_xref="EcoGene:EG31127" ncRNA 1361640..1361695 /ncRNA_class="antisense_RNA" /gene="sokB" /locus_tag="b4429" /gene_synonym="ECK1414" /gene_synonym="JWR0235" /product="sRNA antisense regulator blocking mokB, and hence hokB, translation" /note="antisense RNA blocking mokB and hokB translation" /function="component of addiction module" /db_xref="ASAP:ABE-0047249" /db_xref="EcoGene:EG31127" gene 1361991..1363631 /gene="trg" /locus_tag="b1421" /gene_synonym="ECK1415" /gene_synonym="JW1417" /db_xref="EcoGene:EG11018" CDS 1361991..1363631 /gene="trg" /locus_tag="b1421" /gene_synonym="ECK1415" /gene_synonym="JW1417" /function="regulator; Chemotaxis and mobility" /note="GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor" /protein_id="AAC74503.1" /db_xref="GI:1787690" /db_xref="ASAP:ABE-0004744" /db_xref="UniProtKB/Swiss-Prot:P05704" /db_xref="EcoGene:EG11018" /translation="MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLW QADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESE IKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHE SEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLIT FMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVG TVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHA SKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAV EAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTM STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVS LEEQAARLTEAVDVFRLHKHSVSAEPRGAGEPVSFATV" gene complement(1363669..1364592) /gene="ydcI" /locus_tag="b1422" /gene_synonym="ECK1416" /gene_synonym="JW5226" /db_xref="EcoGene:EG13752" CDS complement(1363669..1364592) /gene="ydcI" /locus_tag="b1422" /gene_synonym="ECK1416" /gene_synonym="JW5226" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74504.2" /db_xref="GI:87081904" /db_xref="ASAP:ABE-0004746" /db_xref="UniProtKB/Swiss-Prot:P77171" /db_xref="EcoGene:EG13752" /translation="MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSK TLNELEQLTGARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDV VRVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSD PELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDAL VQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGA GEPIGILTRVDATFSSGCQLMINAIRKSMPF" gene 1364809..1366152 /gene="ydcJ" /locus_tag="b1423" /gene_synonym="ECK1417" /gene_synonym="JW1419" /db_xref="EcoGene:EG13753" CDS 1364809..1366152 /gene="ydcJ" /locus_tag="b1423" /gene_synonym="ECK1417" /gene_synonym="JW1419" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative metalloenzyme" /protein_id="AAC74505.1" /db_xref="GI:1787692" /db_xref="ASAP:ABE-0004750" /db_xref="UniProtKB/Swiss-Prot:P76097" /db_xref="EcoGene:EG13753" /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA GVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFP GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL" gene 1366377..1368032 /gene="opgD" /locus_tag="b1424" /gene_synonym="ECK1418" /gene_synonym="JW1420" /gene_synonym="mdoD" /gene_synonym="ydcG" /gene_synonym="yzzZ" /db_xref="EcoGene:EG12859" CDS 1366377..1368032 /gene="opgD" /locus_tag="b1424" /gene_synonym="ECK1418" /gene_synonym="JW1420" /gene_synonym="mdoD" /gene_synonym="ydcG" /gene_synonym="yzzZ" /function="putative structure; Not classified" /note="putative glycoprotein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="OPG biosynthetic periplasmic protein" /protein_id="AAC74506.3" /db_xref="GI:145693128" /db_xref="ASAP:ABE-0004754" /db_xref="UniProtKB/Swiss-Prot:P40120" /db_xref="EcoGene:EG12859" /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFSEGWAPGEHYPEK WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS" gene 1368172..1368396 /gene="ydcH" /locus_tag="b1426" /gene_synonym="ECK1419" /gene_synonym="JW5823" /db_xref="EcoGene:EG12865" CDS 1368172..1368396 /gene="ydcH" /locus_tag="b1426" /gene_synonym="ECK1419" /gene_synonym="JW5823" /codon_start=1 /transl_table=11 /product="DUF465 family protein" /protein_id="AAC74508.2" /db_xref="GI:87081906" /db_xref="ASAP:ABE-0004761" /db_xref="UniProtKB/Swiss-Prot:P0ACW6" /db_xref="EcoGene:EG12865" /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGY NAEVVRMKKQKLQLKDEMLKILQQESVKEV" gene 1368459..1368998 /gene="rimL" /locus_tag="b1427" /gene_synonym="ECK1420" /gene_synonym="JW1423" /db_xref="EcoGene:EG10853" CDS 1368459..1368998 /gene="rimL" /locus_tag="b1427" /gene_synonym="ECK1420" /gene_synonym="JW1423" /EC_number="2.3.1.-" /function="enzyme; Ribosomes - maturation and modification" /note="ribosomal-protein-serine acetyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="ribosomal-protein-L7/L12-serine acetyltransferase" /protein_id="AAC74509.1" /db_xref="GI:1787697" /db_xref="ASAP:ABE-0004763" /db_xref="UniProtKB/Swiss-Prot:P13857" /db_xref="EcoGene:EG10853" /translation="MTETIKVSESLELHAVAENHVKPLYQLICKNKTWLQQSLNWPQF VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE FLNDAYDDVNLYARIIDSQ" gene complement(1368990..1369970) /gene="ydcK" /locus_tag="b1428" /gene_synonym="ECK1421" /gene_synonym="JW1424" /db_xref="EcoGene:EG13754" CDS complement(1368990..1369970) /gene="ydcK" /locus_tag="b1428" /gene_synonym="ECK1421" /gene_synonym="JW1424" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74510.1" /db_xref="GI:1787698" /db_xref="ASAP:ABE-0004765" /db_xref="UniProtKB/Swiss-Prot:P76100" /db_xref="EcoGene:EG13754" /translation="MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAG GWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSE ISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKA GIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLVGGNAVVRGGPILLDEHVVIQGESR ITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL" gene 1370094..1371086 /gene="tehA" /locus_tag="b1429" /gene_synonym="ECK1422" /gene_synonym="JW1425" /db_xref="EcoGene:EG11883" CDS 1370094..1371086 /gene="tehA" /locus_tag="b1429" /gene_synonym="ECK1422" /gene_synonym="JW1425" /function="transport; Drug/analog sensitivity" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="potassium-tellurite ethidium and proflavin transporter" /protein_id="AAC74511.1" /db_xref="GI:1787699" /db_xref="ASAP:ABE-0004770" /db_xref="UniProtKB/Swiss-Prot:P25396" /db_xref="EcoGene:EG11883" /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL VILAMIIWGLLTSAFIARLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALG YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS GSDNGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE" gene 1371083..1371676 /gene="tehB" /locus_tag="b1430" /gene_synonym="ECK1423" /gene_synonym="JW1426" /db_xref="EcoGene:EG11884" CDS 1371083..1371676 /gene="tehB" /locus_tag="b1430" /gene_synonym="ECK1423" /gene_synonym="JW1426" /function="enzyme; Drug/analog sensitivity" /note="GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein" /protein_id="AAC74512.1" /db_xref="GI:1787700" /db_xref="ASAP:ABE-0004772" /db_xref="UniProtKB/Swiss-Prot:P25397" /db_xref="EcoGene:EG11884" /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST VVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK" gene 1371978..1372646 /gene="ydcL" /locus_tag="b1431" /gene_synonym="ECK1424" /gene_synonym="JW1427" /db_xref="EcoGene:EG13755" CDS 1371978..1372646 /gene="ydcL" /locus_tag="b1431" /gene_synonym="ECK1424" /gene_synonym="JW1427" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC74513.1" /db_xref="GI:1787701" /db_xref="ASAP:ABE-0004775" /db_xref="UniProtKB/Swiss-Prot:P64451" /db_xref="EcoGene:EG13755" /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKET TSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMK EAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTM DTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFD VNKK" mobile_element 1372682..1374429 /mobile_element_type="insertion sequence:IS609" gene complement(1372739..1373170) /gene="insP" /locus_tag="b4578" /gene_synonym="ECK1425" /gene_synonym="JW5227" /gene_synonym="JW5961" /gene_synonym="orf1" /gene_synonym="orfA" /gene_synonym="tnpA" /gene_synonym="yncK" /pseudo /db_xref="EcoGene:EG14359" CDS complement(1372739..1373170) /gene="insP" /locus_tag="b4578" /gene_synonym="ECK1425" /gene_synonym="JW5227" /gene_synonym="JW5961" /gene_synonym="orf1" /gene_synonym="orfA" /gene_synonym="tnpA" /gene_synonym="yncK" /note="pseudogene, IS609 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285051" /db_xref="ASAP:ABE-0285052" /db_xref="ASAP:ABE-0285110" /db_xref="EcoGene:EG14359" gene 1373238..1374386 /gene="insQ" /locus_tag="b1432" /gene_synonym="ECK1426" /gene_synonym="JW5228" /gene_synonym="orf2" /gene_synonym="orfB" /gene_synonym="tnpB" /gene_synonym="ydcM" /db_xref="EcoGene:EG13756" CDS 1373238..1374386 /gene="insQ" /locus_tag="b1432" /gene_synonym="ECK1426" /gene_synonym="JW5228" /gene_synonym="orf2" /gene_synonym="orfB" /gene_synonym="tnpB" /gene_synonym="ydcM" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS609 transposase B" /protein_id="AAC74514.2" /db_xref="GI:288549314" /db_xref="ASAP:ABE-0004778" /db_xref="UniProtKB/Swiss-Prot:P76102" /db_xref="EcoGene:EG13756" /translation="MRRFAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKN ATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQGVKLDQ ENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMV GLDAGVAKLATLSDGTVFEPVNSFQKNQKKLARLQRQLSRKVKFSNNWQKQKRKIQRL HSCIANIRRDYLHKVTTAVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLN RSILDQGWYEMRRQLAYKQLWRGGQVLAVPPAYTSQRCAYCGHTAKENRLSQSKFRCQ VCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQATA" gene complement(1374426..1375601) /gene="ydcO" /locus_tag="b1433" /gene_synonym="ECK1427" /gene_synonym="JW5229" /db_xref="EcoGene:EG13758" CDS complement(1374426..1375601) /gene="ydcO" /locus_tag="b1433" /gene_synonym="ECK1427" /gene_synonym="JW5229" /function="putative transport; Not classified" /note="putative membrane transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="BenE family inner membrane putative transporter" /protein_id="AAC74515.2" /db_xref="GI:87081909" /db_xref="ASAP:ABE-0004780" /db_xref="UniProtKB/Swiss-Prot:P76103" /db_xref="EcoGene:EG13758" /translation="MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQIS GWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLTLNEAIGVFIVTNA LIVLCGITGLFARLMRIIPHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLVWLA TKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPDFSFAHSLSVALPL FLVTMASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQ SPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITGMMAALPVSWIQMLAGLALLSTIGG SLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCYVVLNLIADRNRY" gene 1375693..1376229 /gene="ydcN" /locus_tag="b1434" /gene_synonym="ECK1428" /gene_synonym="JW1430" /db_xref="EcoGene:EG13757" CDS 1375693..1376229 /gene="ydcN" /locus_tag="b1434" /gene_synonym="ECK1428" /gene_synonym="JW1430" /function="putative regulator; Not classified" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74516.1" /db_xref="GI:1787704" /db_xref="ASAP:ABE-0004783" /db_xref="UniProtKB/Swiss-Prot:P77626" /db_xref="EcoGene:EG13757" /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF SIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR NGGEQTVHFHSLIHYPRS" gene 1376302..1378263 /gene="ydcP" /locus_tag="b1435" /gene_synonym="ECK1429" /gene_synonym="JW1431" /db_xref="EcoGene:EG13759" CDS 1376302..1378263 /gene="ydcP" /locus_tag="b1435" /gene_synonym="ECK1429" /gene_synonym="JW1431" /function="putative enzyme; Not classified" /note="putative protease" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC74517.2" /db_xref="GI:87081910" /db_xref="ASAP:ABE-0004786" /db_xref="UniProtKB/Swiss-Prot:P76104" /db_xref="EcoGene:EG13759" /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS MKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARAS SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDV AVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNR NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA EKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY QRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN HILKMPLPGSVVASVSPDELLKTLPKRKG" repeat_region 1378312..1378344 /note="REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1378355..1378585) /gene="yncJ" /locus_tag="b1436" /gene_synonym="ECK1430" /gene_synonym="JW1432" /db_xref="EcoGene:EG14300" CDS complement(1378355..1378585) /gene="yncJ" /locus_tag="b1436" /gene_synonym="ECK1430" /gene_synonym="JW1432" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74518.1" /db_xref="GI:1787707" /db_xref="ASAP:ABE-0004789" /db_xref="UniProtKB/Swiss-Prot:P64459" /db_xref="EcoGene:EG14300" /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD SDELRAVAEESAEGLREHFYWQKSRKPEAGQR" gene 1378807..1378983 /gene="hicA" /locus_tag="b4532" /gene_synonym="ECK1431" /gene_synonym="JW5230" /gene_synonym="yncN" /db_xref="EcoGene:EG14421" CDS 1378807..1378983 /gene="hicA" /locus_tag="b4532" /gene_synonym="ECK1431" /gene_synonym="JW5230" /gene_synonym="yncN" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin of the HicAB toxin-antitoxin system" /protein_id="AAC74519.2" /db_xref="GI:87081911" /db_xref="ASAP:ABE-0285053" /db_xref="UniProtKB/Swiss-Prot:P76106" /db_xref="EcoGene:EG14421" /translation="MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIK EPLRKAILKQLGLS" gene 1379029..1379445 /gene="hicB" /locus_tag="b1438" /gene_synonym="ECK1432" /gene_synonym="JW1433" /gene_synonym="ydcQ" /db_xref="EcoGene:EG13760" CDS 1379029..1379445 /gene="hicB" /locus_tag="b1438" /gene_synonym="ECK1432" /gene_synonym="JW1433" /gene_synonym="ydcQ" /codon_start=1 /transl_table=11 /product="antitoxin for the HicAB toxin-antitoxin system" /protein_id="AAC74520.2" /db_xref="GI:145693129" /db_xref="ASAP:ABE-0004796" /db_xref="UniProtKB/Swiss-Prot:P67697" /db_xref="EcoGene:EG13760" /translation="MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALL TAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGK PKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV" gene 1379524..1380930 /gene="ydcR" /locus_tag="b1439" /gene_synonym="ECK1433" /gene_synonym="JW1434" /db_xref="EcoGene:EG13761" CDS 1379524..1380930 /gene="ydcR" /locus_tag="b1439" /gene_synonym="ECK1433" /gene_synonym="JW1434" /function="putative regulator; Not classified" /note="multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system; GO_function: GO:0004009 - ATP-binding cassette (ABC) transporter activity; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator and putative aminotransferase" /protein_id="AAC74521.1" /db_xref="GI:1787710" /db_xref="ASAP:ABE-0004800" /db_xref="UniProtKB/Swiss-Prot:P77730" /db_xref="EcoGene:EG13761" /translation="MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVS HAYQLLESQGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRD PSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYAL QGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSV ATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTL IEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQR LQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKI HHNDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWG EREEQAVKQLGKLIQERL" gene 1381175..1382320 /gene="ydcS" /locus_tag="b1440" /gene_synonym="ECK1434" /gene_synonym="JW1435" /db_xref="EcoGene:EG13762" CDS 1381175..1382320 /gene="ydcS" /locus_tag="b1440" /gene_synonym="ECK1434" /gene_synonym="JW1435" /function="enzyme; Not classified" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative ABC transporter periplasmic binding protein" /protein_id="AAC74522.1" /db_xref="GI:1787711" /db_xref="ASAP:ABE-0004803" /db_xref="UniProtKB/Swiss-Prot:P76108" /db_xref="EcoGene:EG13762" /translation="MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGY IERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLI MGKRVQPINTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPP DSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQY QAVLKVLRAQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFP KEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPL LGEKGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR" gene 1382338..1383351 /gene="ydcT" /locus_tag="b1441" /gene_synonym="ECK1435" /gene_synonym="JW1436" /db_xref="EcoGene:EG13763" CDS 1382338..1383351 /gene="ydcT" /locus_tag="b1441" /gene_synonym="ECK1435" /gene_synonym="JW1436" /function="putative transport; Not classified" /note="ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC74523.1" /db_xref="GI:1787712" /db_xref="ASAP:ABE-0004805" /db_xref="UniProtKB/Swiss-Prot:P77795" /db_xref="EcoGene:EG13763" /translation="MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKT TCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLM VKGVNKKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDE PLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDS PRDLYMRPRTPFVAGFVGTSNVFDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGT IQAVQYQGAATRFELKLNGGEKLLVSQANMTGEELPATLTPGQQVMVSWSRDVMVPLV EER" gene 1383352..1384293 /gene="ydcU" /locus_tag="b1442" /gene_synonym="ECK1436" /gene_synonym="JW1437" /db_xref="EcoGene:EG13764" CDS 1383352..1384293 /gene="ydcU" /locus_tag="b1442" /gene_synonym="ECK1436" /gene_synonym="JW1437" /function="putative transport; Not classified" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC74524.1" /db_xref="GI:1787713" /db_xref="ASAP:ABE-0004807" /db_xref="UniProtKB/Swiss-Prot:P77156" /db_xref="EcoGene:EG13764" /translation="MAMNVLQSPSRPGLGKVSGFFWHNPGLGLFLLLLGPLMWFGIVY FGSLLTLLWQGFYTFDDFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASA ILAFPMAWYMARYTSGKMKAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHL GLEPLLTAFLTLPAVGGNTLSTSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQAS ADLGARPRQTFRYVVLPLAIPGIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQ QGAIGNMPMAAAFTLVPIILIALYLAFVKRLGAFDAL" gene 1384283..1385077 /gene="ydcV" /locus_tag="b1443" /gene_synonym="ECK1437" /gene_synonym="JW1438" /db_xref="EcoGene:EG13765" CDS 1384283..1385077 /gene="ydcV" /locus_tag="b1443" /gene_synonym="ECK1437" /gene_synonym="JW1438" /function="putative transport; Not classified" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC74525.1" /db_xref="GI:1787714" /db_xref="ASAP:ABE-0004809" /db_xref="UniProtKB/Swiss-Prot:P0AFR9" /db_xref="EcoGene:EG13765" /translation="MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPP QGLTLRWFSVAAQRSDILDAVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAIS LLLLLPIALPGIVTGLALLTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTS WSLVEASMDLGANGWQTFRYVVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTL PLWLLNQLGRPRDVPVTNVVALLVMLVTTLPILGAWWLTREGDNGQ" gene 1385099..1386523 /gene="patD" /locus_tag="b1444" /gene_synonym="ECK1438" /gene_synonym="JW1439" /gene_synonym="prr" /gene_synonym="ydcW" /db_xref="EcoGene:EG13766" CDS 1385099..1386523 /gene="patD" /locus_tag="b1444" /gene_synonym="ECK1438" /gene_synonym="JW1439" /gene_synonym="prr" /gene_synonym="ydcW" /function="putative enzyme; Not classified" /note="putative aldehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="gamma-aminobutyraldehyde dehydrogenase" /protein_id="AAC74526.1" /db_xref="GI:1787715" /db_xref="ASAP:ABE-0004813" /db_xref="UniProtKB/Swiss-Prot:P77674" /db_xref="EcoGene:EG13766" /translation="MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAA VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIP AIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA PALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINILFGRGKTVGDPLTGHPKVR MVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNA GQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKA VEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLS GYGKDMSLYGLEDYTVVRHVMVKH" gene complement(1386620..1386715) /gene="yncL" /locus_tag="b4598" /gene_synonym="ECK4408" /db_xref="EcoGene:EG14394" CDS complement(1386620..1386715) /gene="yncL" /locus_tag="b4598" /gene_synonym="ECK4408" /codon_start=1 /transl_table=11 /product="stress-induced small inner membrane enterobacterial protein" /protein_id="ABP93444.1" /db_xref="GI:145693130" /db_xref="UniProtKB/Swiss-Prot:A5A615" /db_xref="EcoGene:EG14394" /translation="MNVSSRTVVLINFFAAVGLFTLISMRFGWFI" gene 1386910..1387083 /gene="ydcX" /locus_tag="b1445" /gene_synonym="ECK1439" /gene_synonym="JW5232" /db_xref="EcoGene:EG13767" CDS 1386910..1387083 /gene="ydcX" /locus_tag="b1445" /gene_synonym="ECK1439" /gene_synonym="JW5232" /codon_start=1 /transl_table=11 /product="DUF2566 family protein" /protein_id="AAC74527.2" /db_xref="GI:87081912" /db_xref="ASAP:ABE-0004818" /db_xref="UniProtKB/Swiss-Prot:P64453" /db_xref="EcoGene:EG13767" /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW PMSFPVALLFSLF" gene 1387169..1387402 /gene="ydcY" /locus_tag="b1446" /gene_synonym="ECK1440" /gene_synonym="JW1441" /db_xref="EcoGene:EG13768" CDS 1387169..1387402 /gene="ydcY" /locus_tag="b1446" /gene_synonym="ECK1440" /gene_synonym="JW1441" /codon_start=1 /transl_table=11 /product="DUF2526 family protein" /protein_id="AAC74528.1" /db_xref="GI:1787717" /db_xref="ASAP:ABE-0004821" /db_xref="UniProtKB/Swiss-Prot:P64455" /db_xref="EcoGene:EG13768" /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL" gene complement(1387403..1387852) /gene="ydcZ" /locus_tag="b1447" /gene_synonym="ECK1441" /gene_synonym="JW1442" /db_xref="EcoGene:EG13769" CDS complement(1387403..1387852) /gene="ydcZ" /locus_tag="b1447" /gene_synonym="ECK1441" /gene_synonym="JW1442" /codon_start=1 /transl_table=11 /product="DUF606 family inner membrane protein" /protein_id="AAC74529.1" /db_xref="GI:1787718" /db_xref="ASAP:ABE-0004823" /db_xref="UniProtKB/Swiss-Prot:P76111" /db_xref="EcoGene:EG13769" /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF" gene complement(1387849..1388367) /gene="mnaT" /locus_tag="b1448" /gene_synonym="ECK1442" /gene_synonym="JW5233" /gene_synonym="yncA" /db_xref="EcoGene:EG13770" CDS complement(1387849..1388367) /gene="mnaT" /locus_tag="b1448" /gene_synonym="ECK1442" /gene_synonym="JW5233" /gene_synonym="yncA" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="methionine N-acyltransferase; L-amino acid N-acyltransferase" /protein_id="AAC74530.1" /db_xref="GI:1787719" /db_xref="ASAP:ABE-0004827" /db_xref="UniProtKB/Swiss-Prot:P76112" /db_xref="EcoGene:EG13770" /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE ARTLAGYPVLVSEENGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS RLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQL QLDERTEPDAIG" gene 1388548..1389585 /gene="curA" /locus_tag="b1449" /gene_synonym="ECK1443" /gene_synonym="JW5907" /gene_synonym="yncB" /db_xref="EcoGene:EG13772" CDS 1388548..1389585 /gene="curA" /locus_tag="b1449" /gene_synonym="ECK1443" /gene_synonym="JW5907" /gene_synonym="yncB" /function="enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="curcumin/dihydrocurcumin reductase, NADPH-dependent" /protein_id="AAC74531.4" /db_xref="GI:226510941" /db_xref="ASAP:ABE-0004834" /db_xref="UniProtKB/Swiss-Prot:P76113" /db_xref="EcoGene:EG13772" /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGW QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG PVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKACPKG IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR IRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNF GKVVIRVAGDD" gene 1389783..1390448 /gene="mcbR" /locus_tag="b1450" /gene_synonym="ECK1444" /gene_synonym="JW1445" /gene_synonym="yncC" /db_xref="EcoGene:EG13773" CDS 1389783..1390448 /gene="mcbR" /locus_tag="b1450" /gene_synonym="ECK1444" /gene_synonym="JW1445" /gene_synonym="yncC" /function="putative regulator; Not classified" /note="GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="colanic acid and biofilm gene transcriptional regulator, MqsR-controlled" /protein_id="AAC74532.2" /db_xref="GI:87081914" /db_xref="ASAP:ABE-0004837" /db_xref="UniProtKB/Swiss-Prot:P76114" /db_xref="EcoGene:EG13773" /translation="MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQL GMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVE NLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWV RMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQ YNR" gene complement(1390484..1392586) /gene="yncD" /locus_tag="b1451" /gene_synonym="ECK1445" /gene_synonym="JW1446" /db_xref="EcoGene:EG13774" CDS complement(1390484..1392586) /gene="yncD" /locus_tag="b1451" /gene_synonym="ECK1445" /gene_synonym="JW1446" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative iron outer membrane transporter" /protein_id="AAC74533.1" /db_xref="GI:1787723" /db_xref="ASAP:ABE-0004839" /db_xref="UniProtKB/Swiss-Prot:P76115" /db_xref="EcoGene:EG13774" /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI KQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTR IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE PSPGRNYGVGMNIAWRFE" gene 1392828..1393889 /gene="yncE" /locus_tag="b1452" /gene_synonym="ECK1446" /gene_synonym="JW1447" /db_xref="EcoGene:EG13775" CDS 1392828..1393889 /gene="yncE" /locus_tag="b1452" /gene_synonym="ECK1446" /gene_synonym="JW1447" /function="putative factor; Not classified" /note="putative receptor" /codon_start=1 /transl_table=11 /product="ATP-binding protein, periplasmic, function unknown" /protein_id="AAC74534.1" /db_xref="GI:1787724" /db_xref="ASAP:ABE-0004843" /db_xref="UniProtKB/Swiss-Prot:P76116" /db_xref="EcoGene:EG13775" /translation="MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAY EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ KSTKQQEATQPDDVIRIAL" gene complement(1394002..1395501) /gene="ansP" /locus_tag="b1453" /gene_synonym="ECK1447" /gene_synonym="JW5234" /gene_synonym="yncF" /db_xref="EcoGene:EG13776" CDS complement(1394002..1395501) /gene="ansP" /locus_tag="b1453" /gene_synonym="ECK1447" /gene_synonym="JW5234" /gene_synonym="yncF" /function="transport; Transport of small molecules: Amino acids, amines" /note="L-asparagine permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006529 - asparagine biosynthetic process" /codon_start=1 /transl_table=11 /product="L-asparagine transporter" /protein_id="AAC74535.2" /db_xref="GI:87081915" /db_xref="ASAP:ABE-0004845" /db_xref="UniProtKB/Swiss-Prot:P77610" /db_xref="EcoGene:EG13776" /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS" gene 1395768..1396385 /gene="yncG" /locus_tag="b1454" /gene_synonym="ECK1448" /gene_synonym="JW1449" /db_xref="EcoGene:EG13777" CDS 1395768..1396385 /gene="yncG" /locus_tag="b1454" /gene_synonym="ECK1448" /gene_synonym="JW1449" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="glutathione S-transferase homolog" /protein_id="AAC74536.1" /db_xref="GI:1787726" /db_xref="ASAP:ABE-0004851" /db_xref="UniProtKB/Swiss-Prot:P76117" /db_xref="EcoGene:EG13777" /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELL KTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVA NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC YLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII" gene 1396461..1396673 /gene="yncH" /locus_tag="b1455" /gene_synonym="ECK1449" /gene_synonym="JW5235" /db_xref="EcoGene:EG13778" CDS 1396461..1396673 /gene="yncH" /locus_tag="b1455" /gene_synonym="ECK1449" /gene_synonym="JW5235" /codon_start=1 /transl_table=11 /product="IPR020099 family protein" /protein_id="AAC74537.1" /db_xref="GI:1787727" /db_xref="ASAP:ABE-0004855" /db_xref="UniProtKB/Swiss-Prot:P76118" /db_xref="EcoGene:EG13778" /translation="MVCFLIYITLLFIQRVYFISSEKKLTIHIVQMFQLLSQAFYNLK MFLMMDMLGVGDAININTNKNIRQVC" gene 1397423..1399459 /gene="rhsE" /locus_tag="b1456" /gene_synonym="ECK1450" /gene_synonym="JW1451" /pseudo /db_xref="EcoGene:EG10010" CDS 1397423..1399459 /gene="rhsE" /locus_tag="b1456" /gene_synonym="ECK1450" /gene_synonym="JW1451" /note="pseudogene, Rhs family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004858" /db_xref="UniProtKB/Swiss-Prot:P24211" /db_xref="EcoGene:EG10010" gene 1399443..1399925 /gene="ydcD" /locus_tag="b1457" /gene_synonym="ECK1451" /gene_synonym="JW1452" /db_xref="EcoGene:EG11760" CDS 1399443..1399925 /gene="ydcD" /locus_tag="b1457" /gene_synonym="ECK1451" /gene_synonym="JW1452" /codon_start=1 /transl_table=11 /product="putative immunity protein for RhsE" /protein_id="AAC74539.1" /db_xref="GI:1787729" /db_xref="ASAP:ABE-0004861" /db_xref="UniProtKB/Swiss-Prot:P31991" /db_xref="EcoGene:EG11760" /translation="MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSV EIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRTHCGVVDINLNFFNDILYSVRLK NISKLENMEFCATKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS " gene 1400107..1401160 /gene="yncI" /locus_tag="b1459" /gene_synonym="ECK1452" /gene_synonym="JW1453" /gene_synonym="yncM" /pseudo /db_xref="EcoGene:EG14258" CDS join(1400107..1400844,1400846..1401160) /gene="yncI" /locus_tag="b1459" /gene_synonym="ECK1452" /gene_synonym="JW1453" /gene_synonym="yncM" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004865" /db_xref="ASAP:ABE-0004868" /db_xref="UniProtKB/Swiss-Prot:P76119" /db_xref="EcoGene:EG14258" gene 1401337..1402473 /gene="ydcC" /locus_tag="b1460" /gene_synonym="ECK1454" /gene_synonym="JW1455" /db_xref="EcoGene:EG11526" CDS 1401337..1402473 /gene="ydcC" /locus_tag="b1460" /gene_synonym="ECK1454" /gene_synonym="JW1455" /function="putative enzyme; Not classified" /note="H repeat-associated protein (ORF-H)" /codon_start=1 /transl_table=11 /product="H repeat-associated putative transposase" /protein_id="AAC74542.1" /db_xref="GI:1787733" /db_xref="ASAP:ABE-0004872" /db_xref="UniProtKB/Swiss-Prot:P28917" /db_xref="EcoGene:EG11526" /translation="MELKKLMGHISIIPDYRQAWKMEHKLSDILLLTICAVISGAEGW EDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDD KDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLN MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNP AHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKE LEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFS GIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLTGSGLS" gene 1402573..1402806 /gene="pptA" /locus_tag="b1461" /gene_synonym="ECK1455" /gene_synonym="JW1456" /gene_synonym="ydcE" /db_xref="EcoGene:EG11761" CDS 1402573..1402806 /gene="pptA" /locus_tag="b1461" /gene_synonym="ECK1455" /gene_synonym="JW1456" /gene_synonym="ydcE" /EC_number="5.3.2.-" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate tautomerase" /protein_id="AAC74543.1" /db_xref="GI:1787734" /db_xref="ASAP:ABE-0004875" /db_xref="UniProtKB/Swiss-Prot:P31992" /db_xref="EcoGene:EG11761" /translation="MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIAL QQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA" gene complement(1402803..1403372) /gene="yddH" /locus_tag="b1462" /gene_synonym="ECK1456" /gene_synonym="JW1457" /db_xref="EcoGene:EG13779" CDS complement(1402803..1403372) /gene="yddH" /locus_tag="b1462" /gene_synonym="ECK1456" /gene_synonym="JW1457" /codon_start=1 /transl_table=11 /product="flavin reductase like-protein" /protein_id="AAC74544.2" /db_xref="GI:87081916" /db_xref="ASAP:ABE-0004877" /db_xref="UniProtKB/Swiss-Prot:P76121" /db_xref="EcoGene:EG13779" /translation="MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMP VEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCY GIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGR WQFDDDKLNTLHHLGAGTFVTSGKRVTAG" gene 1403545..1404390 /gene="nhoA" /locus_tag="b1463" /gene_synonym="ECK1457" /gene_synonym="JW1458" /gene_synonym="yddI" /db_xref="EcoGene:EG13780" CDS 1403545..1404390 /gene="nhoA" /locus_tag="b1463" /gene_synonym="ECK1457" /gene_synonym="JW1458" /gene_synonym="yddI" /EC_number="2.3.1.118" /note="GO_process: GO:0008152 - metabolic process" /codon_start=1 /transl_table=11 /product="N-hydroxyarylamine O-acetyltransferase" /protein_id="AAC74545.1" /db_xref="GI:1787736" /db_xref="ASAP:ABE-0004882" /db_xref="UniProtKB/Swiss-Prot:P77567" /db_xref="EcoGene:EG13780" /translation="MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVL LPREIQLDNQSPEEKLVIARRGGYCFEQNGVFERVLRELGFNVRSLLGRVVLSNPPAL PPRTHRLLLVELEEEKWIADVGFGGQTLTAPIRLVSDLVQTTPHGEYRLLQEGDDWVL QFNHHQHWQSMYRFDLCEQQQSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLT NFHFTHYENGHAVEQRNLPDVASLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTH PEAGK" repeat_region 1404404..1404478 /note="REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1404486..1405379) /gene="yddE" /locus_tag="b1464" /gene_synonym="ECK1458" /gene_synonym="JW1459" /db_xref="EcoGene:EG11825" CDS complement(1404486..1405379) /gene="yddE" /locus_tag="b1464" /gene_synonym="ECK1458" /gene_synonym="JW1459" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="PhzC-PhzF family protein" /protein_id="AAC74546.1" /db_xref="GI:1787737" /db_xref="ASAP:ABE-0004886" /db_xref="UniProtKB/Swiss-Prot:P37757" /db_xref="EcoGene:EG11825" /translation="MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGH SETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGK HRVTIEKHNDDYRISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTG HSKVMIPLKPEVDIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIG IVEDPVTGNANGPMGAWLVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQP EKVTISGTAVILFHAEWAIEL" gene complement(1405458..1406138) /gene="narV" /locus_tag="b1465" /gene_synonym="chlZ" /gene_synonym="ECK1459" /gene_synonym="JW1460" /db_xref="EcoGene:EG10644" CDS complement(1405458..1406138) /gene="narV" /locus_tag="b1465" /gene_synonym="chlZ" /gene_synonym="ECK1459" /gene_synonym="JW1460" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase 2 (NRZ), gamma subunit" /protein_id="AAC74547.1" /db_xref="GI:1787738" /db_xref="ASAP:ABE-0004889" /db_xref="UniProtKB/Swiss-Prot:P0AF32" /db_xref="EcoGene:EG10644" /translation="MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQML DKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLT LIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKL VGWAQSIVTFRGGSSEMLNGVAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRR YQIVRSRR" gene complement(1406135..1406830) /gene="narW" /locus_tag="b1466" /gene_synonym="chlZ" /gene_synonym="ECK1460" /gene_synonym="JW1461" /db_xref="EcoGene:EG10645" CDS complement(1406135..1406830) /gene="narW" /locus_tag="b1466" /gene_synonym="chlZ" /gene_synonym="ECK1460" /gene_synonym="JW1461" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="nitrate reductase 2 (NRZ), delta subunit (assembly subunit)" /protein_id="AAC74548.1" /db_xref="GI:1787739" /db_xref="ASAP:ABE-0004892" /db_xref="UniProtKB/Swiss-Prot:P19317" /db_xref="EcoGene:EG10645" /translation="MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLL NAPLLDKQAEWCEVFDRGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRE LPDYLPLYLEYLSVLPDDQAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGS SLSSDSVTKQVNSEERDDTRQALDAVWEEEQVKFIEDNATACDSSPLNQYQRRFSQDV APQYVDISAGGGK" gene complement(1406830..1408374) /gene="narY" /locus_tag="b1467" /gene_synonym="chlZ" /gene_synonym="ECK1461" /gene_synonym="JW1462" /db_xref="EcoGene:EG10647" CDS complement(1406830..1408374) /gene="narY" /locus_tag="b1467" /gene_synonym="chlZ" /gene_synonym="ECK1461" /gene_synonym="JW1462" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 2233673" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase 2 (NRZ), beta subunit" /protein_id="AAC74549.1" /db_xref="GI:1787740" /db_xref="ASAP:ABE-0004896" /db_xref="UniProtKB/Swiss-Prot:P19318" /db_xref="EcoGene:EG10647" /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNV ETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGNKMGVITKIFANPVVPQIDDYYE PFTFDYEHLHSAPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNF EAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRG WRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDA DRIEEAASTEREVDLYERQCEVFLDPHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAM DWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLAN MLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIA NYEDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFNLFNSSRIDAINITEVR DKAEGE" gene complement(1408371..1412111) /gene="narZ" /locus_tag="b1468" /gene_synonym="chlZ" /gene_synonym="ECK1462" /gene_synonym="JW1463" /db_xref="EcoGene:EG10648" CDS complement(1408371..1412111) /gene="narZ" /locus_tag="b1468" /gene_synonym="chlZ" /gene_synonym="ECK1462" /gene_synonym="JW1463" /EC_number="1.7.99.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase 2 (NRZ), alpha subunit" /protein_id="AAC74550.1" /db_xref="GI:1787741" /db_xref="ASAP:ABE-0004898" /db_xref="UniProtKB/Swiss-Prot:P19319" /db_xref="EcoGene:EG10648" /translation="MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDK IVRSTHGVNCTGSCSWKIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWY LYSANRLKYPLIRKRLIELWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIR SNWQELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFY DWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT KTIAITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFINYCRRY SDMPMLVMLEPRDDGSYVPGRMIRASDLVDGLGESNNPQWKTVAVNTAGELVVPNGSI GFRWGEKGKWNLESIAAGTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPV LVRQLPVKNLTLVDGNTCPVVSVYDLVLANYGLDRGLEDENSAKDYAEIKPYTPAWGE QITGVPRQYIETIAREFADTAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLIFCGC VGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVS AQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEF TAQALKSGDLRMACEQPDSSSNHPRNLFVWRSNLLGSSGKGHEYMQKYLLGTESGIQG EELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCLFSDIVLPTATWYEKDDMN TSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGHLGKETDVVLQPLLHDS PAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFTSLGPLMDKLGNGGK GISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAPETNGHVAVKAWQ ALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHVSYNAGYTNVH ELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNGFPEKALNF LTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNANGALTA RAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQL AWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK" repeat_region 1412155..1412183 /note="REP119 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1412193..1413581) /gene="narU" /locus_tag="b1469" /gene_synonym="ECK1463" /gene_synonym="JW1464" /gene_synonym="yddF" /db_xref="EcoGene:EG12153" CDS complement(1412193..1413581) /gene="narU" /locus_tag="b1469" /gene_synonym="ECK1463" /gene_synonym="JW1464" /gene_synonym="yddF" /function="transport; Transport of small molecules: Anions" /note="nitrite extrusion protein 2; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="nitrate/nitrite transporter" /protein_id="AAD13433.1" /db_xref="GI:1787743" /db_xref="ASAP:ABE-0004901" /db_xref="UniProtKB/Swiss-Prot:P37758" /db_xref="EcoGene:EG12153" /translation="MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLL LAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAK QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWV PLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFA MLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA HKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT WLVYGRRKFSQK" gene complement(1413905..1415235) /gene="yddK" /locus_tag="b1471" /gene_synonym="ECK1465" /gene_synonym="JW1467" /gene_synonym="yddJ" /pseudo /db_xref="EcoGene:EG13782" CDS complement(join(1413905..1414285,1414285..1415235)) /gene="yddK" /locus_tag="b1471" /gene_synonym="ECK1465" /gene_synonym="JW1467" /gene_synonym="yddJ" /note="pseudogene, leucine-rich protein; putative glycoportein; GO_process: GO:0009101 - glycoprotein biosynthetic process" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004906" /db_xref="UniProtKB/Swiss-Prot:P76123" /db_xref="EcoGene:EG13782" gene complement(1415271..1415549) /gene="yddL" /locus_tag="b1472" /gene_synonym="ECK1466" /gene_synonym="JW1468" /pseudo /db_xref="EcoGene:EG13783" CDS complement(1415271..1415549) /gene="yddL" /locus_tag="b1472" /gene_synonym="ECK1466" /gene_synonym="JW1468" /note="putative lipoprotein;putative membrane; Not classified; putative outer membrane porin protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0004910" /db_xref="UniProtKB/Swiss-Prot:P77519" /db_xref="EcoGene:EG13783" gene complement(1415809..1416690) /gene="yddG" /locus_tag="b1473" /gene_synonym="ECK1467" /gene_synonym="JW1469" /db_xref="EcoGene:EG12713" CDS complement(1415809..1416690) /gene="yddG" /locus_tag="b1473" /gene_synonym="ECK1467" /gene_synonym="JW1469" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="aromatic amino acid exporter" /protein_id="AAD13437.3" /db_xref="GI:145693132" /db_xref="ASAP:ABE-0004912" /db_xref="UniProtKB/Swiss-Prot:P46136" /db_xref="EcoGene:EG12713" /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATHHQAIEVGMVNYLW PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYF LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMIFSTPVMIK LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA LMVCGGSLLCWLATRRG" gene 1416922..1419969 /gene="fdnG" /locus_tag="b1474" /gene_synonym="ECK1468" /gene_synonym="JW1470" /db_xref="EcoGene:EG11227" CDS 1416922..1419969 /gene="fdnG" /locus_tag="b1474" /gene_synonym="ECK1468" /gene_synonym="JW1470" /EC_number="1.2.1.2" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="formate dehydrogenase-N, nitrate-inducible, alpha subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_except=(pos:1417507..1417509,aa:Sec) /transl_table=11 /product="formate dehydrogenase-N, alpha subunit, nitrate-inducible" /protein_id="AAD13438.1" /db_xref="GI:3868719" /db_xref="ASAP:ABE-0004917" /db_xref="UniProtKB/Swiss-Prot:P24183" /db_xref="EcoGene:EG11227" /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIR SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD KSSWNYQLDENGYAKRDETLTHPRCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCE VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSL MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQSEGGKGVEPLMKMSWNY KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA QPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA" gene 1419982..1420866 /gene="fdnH" /locus_tag="b1475" /gene_synonym="ECK1469" /gene_synonym="JW1471" /db_xref="EcoGene:EG11228" CDS 1419982..1420866 /gene="fdnH" /locus_tag="b1475" /gene_synonym="ECK1469" /gene_synonym="JW1471" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible" /protein_id="AAD13439.1" /db_xref="GI:1787749" /db_xref="ASAP:ABE-0004919" /db_xref="UniProtKB/Swiss-Prot:P0AAJ3" /db_xref="EcoGene:EG11228" /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY IGIGPNKEVDDDEEDHHE" gene 1420859..1421512 /gene="fdnI" /locus_tag="b1476" /gene_synonym="ECK1470" /gene_synonym="JW1472" /db_xref="EcoGene:EG11229" CDS 1420859..1421512 /gene="fdnI" /locus_tag="b1476" /gene_synonym="ECK1470" /gene_synonym="JW1472" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible" /protein_id="AAD13440.1" /db_xref="GI:1787750" /db_xref="ASAP:ABE-0004921" /db_xref="UniProtKB/Swiss-Prot:P0AEK7" /db_xref="EcoGene:EG11229" /translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI" repeat_region 1421592..1421688 /note="RIP120 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" repeat_region 1421770..1421866 /note="RIP121 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1421919..1422203) /gene="yddM" /locus_tag="b1477" /gene_synonym="ECK1471" /gene_synonym="JW5908" /db_xref="EcoGene:EG13784" CDS complement(1421919..1422203) /gene="yddM" /locus_tag="b1477" /gene_synonym="ECK1471" /gene_synonym="JW5908" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAD13441.2" /db_xref="GI:145693133" /db_xref="ASAP:ABE-0004925" /db_xref="UniProtKB/Swiss-Prot:P67699" /db_xref="EcoGene:EG13784" /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ" gene complement(1422349..1423359) /gene="adhP" /locus_tag="b1478" /gene_synonym="ECK1472" /gene_synonym="JW1474" /gene_synonym="yddN" /db_xref="EcoGene:EG12622" CDS complement(1422349..1423359) /gene="adhP" /locus_tag="b1478" /gene_synonym="ECK1472" /gene_synonym="JW1474" /gene_synonym="yddN" /EC_number="1.1.1.1" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="alcohol dehydrogenase; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="ethanol-active dehydrogenase/acetaldehyde-active reductase" /protein_id="AAC74551.2" /db_xref="GI:87081918" /db_xref="ASAP:ABE-0004928" /db_xref="UniProtKB/Swiss-Prot:P39451" /db_xref="EcoGene:EG12622" /translation="MKAAVVTKDHHVDVTYKTLRSLKHGEALLKMECCGVCHTDLHVK NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETL CRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIR PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGADLAINSHTEDA AKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDG IEVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLADINTIFTEMEEGKIRGRMVIDF RH" gene complement(1423493..1425190) /gene="maeA" /locus_tag="b1479" /gene_synonym="ECK1473" /gene_synonym="JW5238" /gene_synonym="sfcA" /db_xref="EcoGene:EG10948" CDS complement(1423493..1425190) /gene="maeA" /locus_tag="b1479" /gene_synonym="ECK1473" /gene_synonym="JW5238" /gene_synonym="sfcA" /EC_number="1.1.1.38" /function="enzyme; Central intermediary metabolism: Gluconeogenesis" /note="NAD-linked malate dehydrogenase (malic enzyme); GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme" /protein_id="AAC74552.2" /db_xref="GI:87081919" /db_xref="ASAP:ABE-0004931" /db_xref="UniProtKB/Swiss-Prot:P26616" /db_xref="EcoGene:EG10948" /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI TDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSEEAARQKVFM VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMV LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI" gene complement(1425347..1425484) /gene="sra" /locus_tag="b1480" /gene_synonym="ECK1474" /gene_synonym="JW5962" /gene_synonym="rpsV" /db_xref="EcoGene:EG11508" CDS complement(1425347..1425484) /gene="sra" /locus_tag="b1480" /gene_synonym="ECK1474" /gene_synonym="JW5962" /gene_synonym="rpsV" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 11292794" /note="stationary phase-induced ribosome-associated protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="stationary-phase-induced ribosome-associated protein" /protein_id="AAC74553.1" /db_xref="GI:1787755" /db_xref="ASAP:ABE-0004935" /db_xref="UniProtKB/Swiss-Prot:P68191" /db_xref="EcoGene:EG11508" /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE K" gene complement(1425586..1425801) /gene="bdm" /locus_tag="b1481" /gene_synonym="ECK1475" /gene_synonym="JW5239" /gene_synonym="yddX" /db_xref="EcoGene:EG14301" CDS complement(1425586..1425801) /gene="bdm" /locus_tag="b1481" /gene_synonym="ECK1475" /gene_synonym="JW5239" /gene_synonym="yddX" /codon_start=1 /transl_table=11 /product="biofilm-dependent modulation protein" /protein_id="AAC74554.2" /db_xref="GI:87081920" /db_xref="ASAP:ABE-0004938" /db_xref="UniProtKB/Swiss-Prot:P76127" /db_xref="EcoGene:EG14301" /translation="MFTYYQAENSTAEPALVNAIEQGLRAQHGVVTEDDILMELTKWV EASDNDILSDIYQQTINYVVSGQHPTL" gene 1426146..1426577 /gene="osmC" /locus_tag="b1482" /gene_synonym="ECK1476" /gene_synonym="JW1477" /db_xref="EcoGene:EG10680" CDS 1426146..1426577 /gene="osmC" /locus_tag="b1482" /gene_synonym="ECK1476" /gene_synonym="JW1477" /function="phenotype; Osmotic adaptation" /note="osmotically inducible protein; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin" /protein_id="AAC74555.1" /db_xref="GI:1787757" /db_xref="ASAP:ABE-0004944" /db_xref="UniProtKB/Swiss-Prot:P0C0L2" /db_xref="EcoGene:EG10680" /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK GTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKS EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS" repeat_region 1426584..1426602 /note="REP122 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1426633..1427559) /gene="ddpF" /locus_tag="b1483" /gene_synonym="ECK1477" /gene_synonym="JW1478" /gene_synonym="yddO" /db_xref="EcoGene:EG13786" CDS complement(1426633..1427559) /gene="ddpF" /locus_tag="b1483" /gene_synonym="ECK1477" /gene_synonym="JW1478" /gene_synonym="yddO" /function="putative transport; Not classified" /note="ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="D,D-dipeptide ABC transporter ATPase" /protein_id="AAC74556.1" /db_xref="GI:1787758" /db_xref="ASAP:ABE-0004947" /db_xref="UniProtKB/Swiss-Prot:P77622" /db_xref="EcoGene:EG13786" /translation="MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI ITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF YERCPLATHGCEVRQSLAIREDGRELRCWRAL" gene complement(1427552..1428538) /gene="ddpD" /locus_tag="b1484" /gene_synonym="ECK1478" /gene_synonym="JW1479" /gene_synonym="yddP" /db_xref="EcoGene:EG13787" CDS complement(1427552..1428538) /gene="ddpD" /locus_tag="b1484" /gene_synonym="ECK1478" /gene_synonym="JW1479" /gene_synonym="yddP" /function="putative transport; Not classified" /note="ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="D,D-dipeptide ABC transporter ATPase" /protein_id="AAC74557.1" /db_xref="GI:1787759" /db_xref="ASAP:ABE-0004949" /db_xref="UniProtKB/Swiss-Prot:P77268" /db_xref="EcoGene:EG13787" /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPM TALNPTRRIGLQMMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGG MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA VVSQLCDSVYVMYAGSVIESGVTADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV" gene complement(1428535..1429431) /gene="ddpC" /locus_tag="b1485" /gene_synonym="ECK1479" /gene_synonym="JW1480" /gene_synonym="yddQ" /db_xref="EcoGene:EG13788" CDS complement(1428535..1429431) /gene="ddpC" /locus_tag="b1485" /gene_synonym="ECK1479" /gene_synonym="JW1480" /gene_synonym="yddQ" /function="putative transport; Not classified" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="D,D-dipeptide ABC transporter permease" /protein_id="AAC74558.1" /db_xref="GI:1787760" /db_xref="ASAP:ABE-0004953" /db_xref="UniProtKB/Swiss-Prot:P77463" /db_xref="EcoGene:EG13788" /translation="MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLML LMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQA SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAV GFNLFGDGIRDLLDPKAGGKQS" gene complement(1429428..1430450) /gene="ddpB" /locus_tag="b1486" /gene_synonym="ECK1480" /gene_synonym="JW1481" /gene_synonym="yddR" /db_xref="EcoGene:EG13789" CDS complement(1429428..1430450) /gene="ddpB" /locus_tag="b1486" /gene_synonym="ECK1480" /gene_synonym="JW1481" /gene_synonym="yddR" /function="putative transport; Not classified" /note="membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="D,D-dipeptide ABC transporter permease" /protein_id="AAC74559.1" /db_xref="GI:1787761" /db_xref="ASAP:ABE-0004955" /db_xref="UniProtKB/Swiss-Prot:P77308" /db_xref="EcoGene:EG13789" /translation="MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDR ASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE LAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGH LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI GRGGGE" gene complement(1430452..1432002) /gene="ddpA" /locus_tag="b1487" /gene_synonym="ECK1481" /gene_synonym="JW5240" /gene_synonym="yddS" /db_xref="EcoGene:EG13790" CDS complement(1430452..1432002) /gene="ddpA" /locus_tag="b1487" /gene_synonym="ECK1481" /gene_synonym="JW5240" /gene_synonym="yddS" /function="putative factor; Not classified" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="D,D-dipeptide ABC transporter periplasmic binding protein" /protein_id="AAC74560.1" /db_xref="GI:1787762" /db_xref="ASAP:ABE-0004958" /db_xref="UniProtKB/Swiss-Prot:P76128" /db_xref="EcoGene:EG13790" /translation="MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLD PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA MQYNHDETKAKAEWDKVTSKPTSLTFLYSDNDPNWEPIALATQSSLNKLGIIVKLEKL ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV FNINTMSK" gene complement(1432016..1432597) /gene="ddpX" /locus_tag="b1488" /gene_synonym="ECK1482" /gene_synonym="JW1483" /gene_synonym="vanX" /gene_synonym="yddT" /db_xref="EcoGene:EG13791" CDS complement(1432016..1432597) /gene="ddpX" /locus_tag="b1488" /gene_synonym="ECK1482" /gene_synonym="JW1483" /gene_synonym="vanX" /gene_synonym="yddT" /EC_number="3.4.13.-" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="D-ala-D-ala dipeptidase, Zn-dependent" /protein_id="AAC74561.1" /db_xref="GI:1787763" /db_xref="ASAP:ABE-0004960" /db_xref="UniProtKB/Swiss-Prot:P77790" /db_xref="EcoGene:EG13791" /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS SEWWHFELPQAASYPLLADQFSCFISPGTQHVS" gene complement(1432855..1435254) /gene="dosP" /locus_tag="b1489" /gene_synonym="dos" /gene_synonym="ECK1483" /gene_synonym="JW1484" /gene_synonym="yddU" /db_xref="EcoGene:EG13792" CDS complement(1432855..1435254) /gene="dosP" /locus_tag="b1489" /gene_synonym="dos" /gene_synonym="ECK1483" /gene_synonym="JW1484" /gene_synonym="yddU" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator" /protein_id="AAC74562.2" /db_xref="GI:87081921" /db_xref="ASAP:ABE-0004963" /db_xref="UniProtKB/Swiss-Prot:P76129" /db_xref="EcoGene:EG13792" /translation="MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGIL QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYL LSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF AETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK I" gene complement(1435279..1436661) /gene="dosC" /locus_tag="b1490" /gene_synonym="ECK1484" /gene_synonym="JW5241" /gene_synonym="yddV" /db_xref="EcoGene:EG13793" CDS complement(1435279..1436661) /gene="dosC" /locus_tag="b1490" /gene_synonym="ECK1484" /gene_synonym="JW5241" /gene_synonym="yddV" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator" /protein_id="AAC74563.3" /db_xref="GI:145693134" /db_xref="ASAP:ABE-0004965" /db_xref="UniProtKB/Swiss-Prot:P0AA89" /db_xref="EcoGene:EG13793" /translation="MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYR IVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIG IPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDS SASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFG LWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTV SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDV DKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLR TAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR NRVELWKASL" gene complement(1437025..1438344) /gene="yddW" /locus_tag="b1491" /gene_synonym="ECK1485" /gene_synonym="JW1486" /db_xref="EcoGene:EG13794" CDS complement(1437025..1438344) /gene="yddW" /locus_tag="b1491" /gene_synonym="ECK1485" /gene_synonym="JW1486" /codon_start=1 /transl_table=11 /product="liprotein, glycosyl hydrolase homolog" /protein_id="AAC74564.1" /db_xref="GI:1787767" /db_xref="ASAP:ABE-0004970" /db_xref="UniProtKB/Swiss-Prot:P64426" /db_xref="EcoGene:EG13794" /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIA KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS" gene complement(1438475..1440010) /gene="gadC" /locus_tag="b1492" /gene_synonym="acsA" /gene_synonym="ECK1486" /gene_synonym="JW1487" /gene_synonym="xasA" /db_xref="EcoGene:EG12456" CDS complement(1438475..1440010) /gene="gadC" /locus_tag="b1492" /gene_synonym="acsA" /gene_synonym="ECK1486" /gene_synonym="JW1487" /gene_synonym="xasA" /function="putative transport; Not classified" /note="acid sensitivity protein, putative transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="glutamate:gamma-aminobutyric acid antiporter" /protein_id="AAC74565.1" /db_xref="GI:1787768" /db_xref="ASAP:ABE-0004973" /db_xref="UniProtKB/Swiss-Prot:P63235" /db_xref="EcoGene:EG12456" /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND KKH" gene complement(1440166..1441566) /gene="gadB" /locus_tag="b1493" /gene_synonym="ECK1487" /gene_synonym="JW1488" /db_xref="EcoGene:EG11490" CDS complement(1440166..1441566) /gene="gadB" /locus_tag="b1493" /gene_synonym="ECK1487" /gene_synonym="JW1488" /EC_number="4.1.1.15" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 8455549" /note="glutamate decarboxylase isozyme; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006520 - cellular amino acid metabolic process" /codon_start=1 /transl_table=11 /product="glutamate decarboxylase B, PLP-dependent" /protein_id="AAC74566.1" /db_xref="GI:1787769" /db_xref="ASAP:ABE-0004976" /db_xref="UniProtKB/Swiss-Prot:P69910" /db_xref="EcoGene:EG11490" /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN MVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG PVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYE FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK FGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTL YDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD HPKLQGIAQQNSFKHT" gene complement(1441928..1444723) /gene="pqqL" /locus_tag="b1494" /gene_synonym="ECK1488" /gene_synonym="JW1489" /gene_synonym="pqqE" /gene_synonym="pqqM" /gene_synonym="yddC" /db_xref="EcoGene:EG11744" CDS complement(1441928..1444723) /gene="pqqL" /locus_tag="b1494" /gene_synonym="ECK1488" /gene_synonym="JW1489" /gene_synonym="pqqE" /gene_synonym="pqqM" /gene_synonym="yddC" /function="putative enzyme; Not classified" /note="putative zinc protease; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative periplasmic M16 family zinc metalloendopeptidase" /protein_id="AAC74567.1" /db_xref="GI:1787770" /db_xref="ASAP:ABE-0004979" /db_xref="UniProtKB/Swiss-Prot:P31828" /db_xref="EcoGene:EG11744" /translation="MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGL RYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETF ESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAE RGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQR WYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDK ENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTA RSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWL KNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQL RKNQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDADPQ AEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIA LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLIN QRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIA QFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPLAAGKPL TRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIRE QASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQEL NEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVK QYLSHPVNTYTGVLLPK" gene complement(1444768..1447140) /gene="yddB" /locus_tag="b1495" /gene_synonym="ECK1489" /gene_synonym="JW1490" /db_xref="EcoGene:EG11743" CDS complement(1444768..1447140) /gene="yddB" /locus_tag="b1495" /gene_synonym="ECK1489" /gene_synonym="JW1490" /codon_start=1 /transl_table=11 /product="putative TonB-dependent outer membrane receptor" /protein_id="AAC74568.1" /db_xref="GI:1787771" /db_xref="ASAP:ABE-0004982" /db_xref="UniProtKB/Swiss-Prot:P31827" /db_xref="EcoGene:EG11743" /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPD FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALS KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ KFAVGNVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDN YTLYMADRISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFANQTSMITAGYNRY YGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKIGKNVIARAN YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQ IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW TPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF" gene complement(1447178..1448863) /gene="yddA" /locus_tag="b1496" /gene_synonym="ECK1490" /gene_synonym="JW5242" /db_xref="EcoGene:EG11742" CDS complement(1447178..1448863) /gene="yddA" /locus_tag="b1496" /gene_synonym="ECK1490" /gene_synonym="JW5242" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative multidrug ABC transporter permease/ATPase" /protein_id="AAC74569.1" /db_xref="GI:1787772" /db_xref="ASAP:ABE-0004984" /db_xref="UniProtKB/Swiss-Prot:P31826" /db_xref="EcoGene:EG11742" /translation="MITIPITLRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ SLSMLITFTVILWESAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRLMNRQR WLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSP GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICK ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI FLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL" gene complement(1449154..1450311) /gene="ydeM" /locus_tag="b1497" /gene_synonym="ECK1491" /gene_synonym="JW1492" /db_xref="EcoGene:EG13795" CDS complement(1449154..1450311) /gene="ydeM" /locus_tag="b1497" /gene_synonym="ECK1491" /gene_synonym="JW1492" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="putative YdeN-specific sulfatase-maturating enzyme" /protein_id="AAC74570.2" /db_xref="GI:87081923" /db_xref="ASAP:ABE-0004986" /db_xref="UniProtKB/Swiss-Prot:P76134" /db_xref="EcoGene:EG13795" /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK QYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEW CAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAY GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIY ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRIPAKCQQCAYKPICNGGCPKHRIT KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN" gene complement(1450363..1452045) /gene="ydeN" /locus_tag="b1498" /gene_synonym="ECK1492" /gene_synonym="JW5243" /db_xref="EcoGene:EG13796" CDS complement(1450363..1452045) /gene="ydeN" /locus_tag="b1498" /gene_synonym="ECK1492" /gene_synonym="JW5243" /function="putative enzyme; Not classified" /note="putative sulfatase; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="putative Ser-type periplasmic non-aryl sulfatase" /protein_id="AAC74571.2" /db_xref="GI:87081924" /db_xref="ASAP:ABE-0004988" /db_xref="UniProtKB/Swiss-Prot:P77318" /db_xref="EcoGene:EG13796" /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTD LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK" gene complement(1452447..1453208) /gene="ydeO" /locus_tag="b1499" /gene_synonym="ECK1493" /gene_synonym="JW1494" /db_xref="EcoGene:EG13797" CDS complement(1452447..1453208) /gene="ydeO" /locus_tag="b1499" /gene_synonym="ECK1493" /gene_synonym="JW1494" /function="regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="UV-inducible global regulator, EvgA-, GadE-dependent" /protein_id="AAC74572.1" /db_xref="GI:1787776" /db_xref="ASAP:ABE-0004992" /db_xref="UniProtKB/Swiss-Prot:P76135" /db_xref="EcoGene:EG13797" /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHPWKLKDICDCL YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNALAI" gene complement(1453283..1453480) /gene="safA" /locus_tag="b1500" /gene_synonym="ECK4475" /gene_synonym="yneN" /db_xref="EcoGene:EG14466" CDS complement(1453283..1453480) /gene="safA" /locus_tag="b1500" /gene_synonym="ECK4475" /gene_synonym="yneN" /function="regulator; Global regulatory functions" /codon_start=1 /transl_table=11 /product="two-component system connector membrane protein, EvgSA to PhoQP" /protein_id="AAC74573.1" /db_xref="GI:1787777" /db_xref="UniProtKB/Swiss-Prot:P76136" /db_xref="EcoGene:EG14466" /translation="MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLS ISEMGRIARDLTHFIINSLQG" gene complement(1453728..1456007) /gene="ydeP" /locus_tag="b1501" /gene_synonym="ECK1494" /gene_synonym="JW1495" /db_xref="EcoGene:EG13798" CDS complement(1453728..1456007) /gene="ydeP" /locus_tag="b1501" /gene_synonym="ECK1494" /gene_synonym="JW1495" /function="putative enzyme; Not classified" /note="putative oxidoreductase, major subunit" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74574.1" /db_xref="GI:1787778" /db_xref="ASAP:ABE-0005001" /db_xref="UniProtKB/Swiss-Prot:P77561" /db_xref="EcoGene:EG13798" /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP EGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW KDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP VLGRSEIDMQKNGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD PLSGIPGYKSIPVELEPSN" gene complement(1456341..1457255) /gene="ydeQ" /locus_tag="b1502" /gene_synonym="ECK1495" /gene_synonym="fmlD" /gene_synonym="JW1496" /db_xref="EcoGene:EG13799" CDS complement(1456341..1457255) /gene="ydeQ" /locus_tag="b1502" /gene_synonym="ECK1495" /gene_synonym="fmlD" /gene_synonym="JW1496" /function="putative structural component; Surface structures" /note="putative adhesin; similar to FimH protein" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC74575.1" /db_xref="GI:1787779" /db_xref="ASAP:ABE-0005006" /db_xref="UniProtKB/Swiss-Prot:P77588" /db_xref="EcoGene:EG13799" /translation="MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYV NLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNN VTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATL GSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLS FYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLG LSATYGQTGNKVSAGTVQSVIGVTFIYE" gene complement(1457314..1457817) /gene="ydeR" /locus_tag="b1503" /gene_synonym="ECK1496" /gene_synonym="JW1497" /db_xref="EcoGene:EG13800" CDS complement(1457314..1457817) /gene="ydeR" /locus_tag="b1503" /gene_synonym="ECK1496" /gene_synonym="JW1497" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC74576.1" /db_xref="GI:1787780" /db_xref="ASAP:ABE-0005008" /db_xref="UniProtKB/Swiss-Prot:P77294" /db_xref="EcoGene:EG13800" /translation="MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTK EANVNLGDLYTRNLQQPGSASGWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEG TAENIQIELRDDQDAALKNGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEALI NVIYTWQ" gene complement(1457830..1458360) /gene="ydeS" /locus_tag="b1504" /gene_synonym="ECK1497" /gene_synonym="JW1498" /db_xref="EcoGene:EG13801" CDS complement(1457830..1458360) /gene="ydeS" /locus_tag="b1504" /gene_synonym="ECK1497" /gene_synonym="JW1498" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC74577.1" /db_xref="GI:1787781" /db_xref="ASAP:ABE-0005013" /db_xref="UniProtKB/Swiss-Prot:P77789" /db_xref="EcoGene:EG13801" /translation="MKYNNIIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDS LNFTVDLQKNSARQFPTTGSTSPAVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLK LDEGSNTASGLGIEILDANMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSV NPGLVRASATFTLEFQ" gene complement(1458374..1459600) /gene="ydeT" /locus_tag="b1505" /gene_synonym="ECK1498" /gene_synonym="fmlC" /gene_synonym="JW1499" /pseudo /db_xref="EcoGene:EG13802" CDS complement(1458374..1459600) /gene="ydeT" /locus_tag="b1505" /gene_synonym="ECK1498" /gene_synonym="fmlC" /gene_synonym="JW1499" /note="pseudogene; putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005017" /db_xref="UniProtKB/Swiss-Prot:P76137" /db_xref="EcoGene:EG13802" gene complement(1459855..1460057) /gene="yneL" /locus_tag="b1506" /gene_synonym="ECK1499" /gene_synonym="JW5244" /pseudo /db_xref="EcoGene:EG14360" CDS complement(join(1459855..1459947,1459947..1460057)) /gene="yneL" /locus_tag="b1506" /gene_synonym="ECK1499" /gene_synonym="JW5244" /note="pseudogene, AraC family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005019" /db_xref="UniProtKB/Swiss-Prot:P76138" /db_xref="EcoGene:EG14360" misc_feature complement(1460271..1460298) /note="Dif; site of action for XerCD chromosome resolvase; required for proper segregation of circular daughter chromosomes; Dif; recA-independent recombination site in terminus" gene complement(1460375..1461697) /gene="hipA" /locus_tag="b1507" /gene_synonym="ECK1500" /gene_synonym="JW1500" /db_xref="EcoGene:EG10443" CDS complement(1460375..1461697) /gene="hipA" /locus_tag="b1507" /gene_synonym="ECK1500" /gene_synonym="JW1500" /function="enzyme; Protein modification" /note="persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0006259 - DNA metabolic process" /codon_start=1 /transl_table=11 /product="inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase" /protein_id="AAC74580.1" /db_xref="GI:1787785" /db_xref="ASAP:ABE-0005022" /db_xref="UniProtKB/Swiss-Prot:P23874" /db_xref="EcoGene:EG10443" /translation="MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLS LPLQRGNITSDAVFNFFDNLLPDSPIVRDRIVKRYHAKSRQPFDLLSEIGRDSVGAVT LIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTAL LRIGNDWCIPKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVP DAEIIKAGNVRALAVERFDRRWNAERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIA RIMAFLMGSSEALKDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDII SAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEIL SDFARMIPAALDNVKTSLPTDFPENVVTAVESNVLRLHGRLSREYGSK" gene complement(1461697..1461963) /gene="hipB" /locus_tag="b1508" /gene_synonym="ECK1501" /gene_synonym="JW1501" /db_xref="EcoGene:EG10442" CDS complement(1461697..1461963) /gene="hipB" /locus_tag="b1508" /gene_synonym="ECK1501" /gene_synonym="JW1501" /function="regulator; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 8021189" /note="persistence to inhibition of murein or DNA biosynthesis; regulatory protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0006259 - DNA metabolic process" /codon_start=1 /transl_table=11 /product="antitoxin of HipAB toxin-antitoxin system" /protein_id="AAC74581.1" /db_xref="GI:1787786" /db_xref="ASAP:ABE-0005024" /db_xref="UniProtKB/Swiss-Prot:P23873" /db_xref="EcoGene:EG10442" /translation="MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISN FENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW" repeat_region 1462152..1462176 /note="REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1462186..1467508) /gene="yneO" /locus_tag="b4696" /gene_synonym="ECK1503" /gene_synonym="JW1503" /gene_synonym="orfT" /gene_synonym="ydeK" /gene_synonym="ydeU" /pseudo /db_xref="EcoGene:EG11780" CDS complement(join(1462186..1463646,1463648..1467508)) /gene="yneO" /locus_tag="b4696" /gene_synonym="ECK1503" /gene_synonym="JW1503" /gene_synonym="orfT" /gene_synonym="ydeK" /gene_synonym="ydeU" /note="pseudogene, AidA homolog" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005037" /db_xref="UniProtKB/Swiss-Prot:P32051" /db_xref="EcoGene:EG11780" gene complement(1468138..1469730) /gene="lsrK" /locus_tag="b1511" /gene_synonym="ECK1504" /gene_synonym="JW1504" /gene_synonym="ydeV" /db_xref="EcoGene:EG13804" CDS complement(1468138..1469730) /gene="lsrK" /locus_tag="b1511" /gene_synonym="ECK1504" /gene_synonym="JW1504" /gene_synonym="ydeV" /function="enzyme; Not classified" /codon_start=1 /transl_table=11 /product="autoinducer-2 (AI-2) kinase" /protein_id="AAC74584.1" /db_xref="GI:1787789" /db_xref="ASAP:ABE-0005041" /db_xref="UniProtKB/Swiss-Prot:P77432" /db_xref="EcoGene:EG13804" /translation="MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWR HLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNE GAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSD IYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADIL SPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTF WQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAE RLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKAT LFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIP VVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAV YQDQLGLVDHGLTTSLWKAPGL" gene complement(1469809..1470762) /gene="lsrR" /locus_tag="b1512" /gene_synonym="ECK1505" /gene_synonym="JW1505" /gene_synonym="ydeW" /db_xref="EcoGene:EG13805" CDS complement(1469809..1470762) /gene="lsrR" /locus_tag="b1512" /gene_synonym="ECK1505" /gene_synonym="JW1505" /gene_synonym="ydeW" /function="regulator; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="GO_function: GO:0016564 - transcription repressor activity" /codon_start=1 /transl_table=11 /product="lsr operon transcriptional repressor" /protein_id="AAC74585.1" /db_xref="GI:1787791" /db_xref="ASAP:ABE-0005045" /db_xref="UniProtKB/Swiss-Prot:P76141" /db_xref="EcoGene:EG13805" /translation="MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTR LKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRL GIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGI GQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDD ATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTI PVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS" gene 1471011..1472546 /gene="lsrA" /locus_tag="b1513" /gene_synonym="ECK1506" /gene_synonym="ego" /gene_synonym="JW1506" /gene_synonym="ydeX" /db_xref="EcoGene:EG13806" CDS 1471011..1472546 /gene="lsrA" /locus_tag="b1513" /gene_synonym="ECK1506" /gene_synonym="ego" /gene_synonym="JW1506" /gene_synonym="ydeX" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="autoinducer-2 (AI-2)-transporting ATPase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="autoinducer 2 import ATP-binding protein" /protein_id="AAC74586.1" /db_xref="GI:1787792" /db_xref="ASAP:ABE-0005056" /db_xref="UniProtKB/Swiss-Prot:P77257" /db_xref="EcoGene:EG13806" /translation="MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLG GNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLS IKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSR ILILDEPTASLTPAETERLFSRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTI ALSGKTSELSTDDIIQAITPAVREKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTG EGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNGKEINKLSTGE RLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLERYRRALNI KFNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIA AQNVAVLLISSDLEEIELMADRVYVMHQGEITHSALTERDINVETIMRVAFGDSQRQE ASC" gene 1472540..1473568 /gene="lsrC" /locus_tag="b1514" /gene_synonym="ECK1507" /gene_synonym="JW1507" /gene_synonym="ydeY" /db_xref="EcoGene:EG13807" CDS 1472540..1473568 /gene="lsrC" /locus_tag="b1514" /gene_synonym="ECK1507" /gene_synonym="JW1507" /gene_synonym="ydeY" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="autoinducer 2 import system permease protein" /protein_id="AAC74587.1" /db_xref="GI:1787793" /db_xref="ASAP:ABE-0005059" /db_xref="UniProtKB/Swiss-Prot:P77672" /db_xref="EcoGene:EG13807" /translation="MLKFIQNNREITALLAVVLLFVLPGFLDRQYLSVQTLTMVYSSA QILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLA GFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLLGVS AIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMA ALAGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQID SVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKPAS SGKKREAA" gene 1473568..1474560 /gene="lsrD" /locus_tag="b1515" /gene_synonym="ECK1508" /gene_synonym="JW1508" /gene_synonym="ydeZ" /db_xref="EcoGene:EG13808" CDS 1473568..1474560 /gene="lsrD" /locus_tag="b1515" /gene_synonym="ECK1508" /gene_synonym="JW1508" /gene_synonym="ydeZ" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="autoinducer 2 import system permease protein" /protein_id="AAC74588.1" /db_xref="GI:1787794" /db_xref="ASAP:ABE-0005061" /db_xref="UniProtKB/Swiss-Prot:P0AFS1" /db_xref="EcoGene:EG13808" /translation="MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFIC IGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGL INAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDV LGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMT GLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLV GYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP" gene 1474572..1475594 /gene="lsrB" /locus_tag="b1516" /gene_synonym="ECK1509" /gene_synonym="JW1509" /gene_synonym="yneA" /db_xref="EcoGene:EG13809" CDS 1474572..1475594 /gene="lsrB" /locus_tag="b1516" /gene_synonym="ECK1509" /gene_synonym="JW1509" /gene_synonym="yneA" /function="putative regulator; Not classified" /note="periplasmic autoinducer-2 (AI-2) binding protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="autoinducer 2-binding protein" /protein_id="AAC74589.1" /db_xref="GI:1787795" /db_xref="ASAP:ABE-0005063" /db_xref="UniProtKB/Swiss-Prot:P76142" /db_xref="EcoGene:EG13809" /translation="MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTS GGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII APDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISV YVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKEN IGKYDF" gene 1475621..1476496 /gene="lsrF" /locus_tag="b1517" /gene_synonym="ECK1510" /gene_synonym="JW1510" /gene_synonym="yneB" /db_xref="EcoGene:EG13810" CDS 1475621..1476496 /gene="lsrF" /locus_tag="b1517" /gene_synonym="ECK1510" /gene_synonym="JW1510" /gene_synonym="yneB" /function="enzyme; Degradation of small molecules: Carbon compounds" /codon_start=1 /transl_table=11 /product="putative autoinducer-2 (AI-2) aldolase" /protein_id="AAC74590.1" /db_xref="GI:1787796" /db_xref="ASAP:ABE-0005065" /db_xref="UniProtKB/Swiss-Prot:P76143" /db_xref="EcoGene:EG13810" /translation="MADLDDIKDGKDFRTDQPQKNIPFTLKGCGALDWGMQSRLSRIF NPKTGKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNR PVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLV DAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGC PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHN ETADRAYELYLSEKQ" gene 1476520..1476810 /gene="lsrG" /locus_tag="b1518" /gene_synonym="ECK1511" /gene_synonym="JW1511" /gene_synonym="yneC" /db_xref="EcoGene:EG13811" CDS 1476520..1476810 /gene="lsrG" /locus_tag="b1518" /gene_synonym="ECK1511" /gene_synonym="JW1511" /gene_synonym="yneC" /function="enzyme; Degradation of small molecules: Carbon compounds" /codon_start=1 /transl_table=11 /product="autoinducer-2 (AI-2) degrading protein LsrG" /protein_id="AAC74591.1" /db_xref="GI:1787797" /db_xref="ASAP:ABE-0005067" /db_xref="UniProtKB/Swiss-Prot:P64461" /db_xref="EcoGene:EG13811" /translation="MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDP EVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP" gene 1476867..1477625 /gene="tam" /locus_tag="b1519" /gene_synonym="ECK1512" /gene_synonym="JW1512" /gene_synonym="lsrE" /gene_synonym="yneD" /db_xref="EcoGene:EG13812" CDS 1476867..1477625 /gene="tam" /locus_tag="b1519" /gene_synonym="ECK1512" /gene_synonym="JW1512" /gene_synonym="lsrE" /gene_synonym="yneD" /EC_number="2.1.1.144" /function="enzyme; Detoxification" /note="trans-aconitate 2-methyltransferase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="trans-aconitate methyltransferase" /protein_id="AAC74592.1" /db_xref="GI:1787798" /db_xref="ASAP:ABE-0005070" /db_xref="UniProtKB/Swiss-Prot:P76145" /db_xref="EcoGene:EG13812" /translation="MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGN STALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANAS LQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLA GVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFL KRYHQMLEEQYPLQENGQILLAFPRLFIVARRME" gene complement(1477629..1478543) /gene="yneE" /locus_tag="b1520" /gene_synonym="ECK1513" /gene_synonym="JW5245" /db_xref="EcoGene:EG13813" CDS complement(1477629..1478543) /gene="yneE" /locus_tag="b1520" /gene_synonym="ECK1513" /gene_synonym="JW5245" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="bestrophin family putative inner membrane protein" /protein_id="AAC74593.2" /db_xref="GI:87081925" /db_xref="ASAP:ABE-0005072" /db_xref="UniProtKB/Swiss-Prot:P76146" /db_xref="EcoGene:EG13813" /translation="MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPW YTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKT TLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQRVLASNSPANRIL LIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTV YLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEDPFGTENNDLPLDAICN AIEIDLLQMNDEAEIPAKILPDRHYQLT" gene complement(1478750..1480201) /gene="uxaB" /locus_tag="b1521" /gene_synonym="ECK1514" /gene_synonym="JW1514" /db_xref="EcoGene:EG11065" CDS complement(1478750..1480201) /gene="uxaB" /locus_tag="b1521" /gene_synonym="ECK1514" /gene_synonym="JW1514" /EC_number="1.1.1.58" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3525742" /note="altronate oxidoreductase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="altronate oxidoreductase, NAD-dependent" /protein_id="AAT48131.1" /db_xref="GI:48994885" /db_xref="ASAP:ABE-0005076" /db_xref="UniProtKB/Swiss-Prot:P0A6L7" /db_xref="EcoGene:EG11065" /translation="MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDL NSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEY DEFLKLAHNPEMRFVFSNTTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGA LDKGWIIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTG YPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKP YKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRD ELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKANGTLPARLTFA LAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTQELVAIVLAEKDHWE QDLTQVPGLVEQVANDLDAILEKGMREAVRPLC" gene complement(1480428..1481375) /gene="yneF" /locus_tag="b1522" /gene_synonym="ECK1515" /gene_synonym="JW5825" /db_xref="EcoGene:EG13814" CDS complement(1480428..1481375) /gene="yneF" /locus_tag="b1522" /gene_synonym="ECK1515" /gene_synonym="JW5825" /codon_start=1 /transl_table=11 /product="putative membrane-bound diguanylate cyclase" /protein_id="AAC74595.1" /db_xref="GI:1787802" /db_xref="ASAP:ABE-0005081" /db_xref="UniProtKB/Swiss-Prot:P76147" /db_xref="EcoGene:EG13814" /translation="MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALI VSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISV GSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGL YEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLV ARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASY LTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV" gene complement(1481487..1481846) /gene="yneG" /locus_tag="b1523" /gene_synonym="ECK1516" /gene_synonym="JW1516" /db_xref="EcoGene:EG13815" CDS complement(1481487..1481846) /gene="yneG" /locus_tag="b1523" /gene_synonym="ECK1516" /gene_synonym="JW1516" /codon_start=1 /transl_table=11 /product="DUF4186 family protein" /protein_id="AAC74596.1" /db_xref="GI:1787803" /db_xref="ASAP:ABE-0005084" /db_xref="UniProtKB/Swiss-Prot:P76148" /db_xref="EcoGene:EG13815" /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR YIVAVIYHWLVVQMNQP" gene complement(1481846..1482772) /gene="glsB" /locus_tag="b1524" /gene_synonym="ECK1517" /gene_synonym="glsA2" /gene_synonym="JW1517" /gene_synonym="yneH" /db_xref="EcoGene:EG13816" CDS complement(1481846..1482772) /gene="glsB" /locus_tag="b1524" /gene_synonym="ECK1517" /gene_synonym="glsA2" /gene_synonym="JW1517" /gene_synonym="yneH" /function="enzyme; l-glutamine catabolism" /note="putative glutaminase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="glutaminase 2" /protein_id="AAC74597.1" /db_xref="GI:1787804" /db_xref="ASAP:ABE-0005086" /db_xref="UniProtKB/Swiss-Prot:P0A6W0" /db_xref="EcoGene:EG13816" /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY" gene complement(1482836..1484224) /gene="sad" /locus_tag="b1525" /gene_synonym="ECK1518" /gene_synonym="JW5247" /gene_synonym="yneI" /db_xref="EcoGene:EG13817" CDS complement(1482836..1484224) /gene="sad" /locus_tag="b1525" /gene_synonym="ECK1518" /gene_synonym="JW5247" /gene_synonym="yneI" /EC_number="1.2.1.24" /function="putative enzyme; Not classified" /note="putative aldehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="succinate semialdehyde dehydrogenase, NAD(P)+-dependent" /protein_id="AAC74598.2" /db_xref="GI:87081926" /db_xref="ASAP:ABE-0005092" /db_xref="UniProtKB/Swiss-Prot:P76149" /db_xref="EcoGene:EG13817" /translation="MTITPATHAISINPATGEQLSVLPWAGADDIENALQLAAAGFRD WRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAE HGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGA AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII EEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLL LGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFG LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHE FCNIQTVWKDRI" gene 1484325..1485206 /gene="yneJ" /locus_tag="b1526" /gene_synonym="ECK1519" /gene_synonym="JW1519" /db_xref="EcoGene:EG13818" CDS 1484325..1485206 /gene="yneJ" /locus_tag="b1526" /gene_synonym="ECK1519" /gene_synonym="JW1519" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74599.1" /db_xref="GI:1787806" /db_xref="ASAP:ABE-0005096" /db_xref="UniProtKB/Swiss-Prot:P77309" /db_xref="EcoGene:EG13818" /translation="MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELG VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV RIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYR EELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY HGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE AFIQLLDVPDSARQGYQ" gene 1485284..1486399 /gene="yneK" /locus_tag="b1527" /gene_synonym="ECK1520" /gene_synonym="JW1520" /db_xref="EcoGene:EG13819" CDS 1485284..1486399 /gene="yneK" /locus_tag="b1527" /gene_synonym="ECK1520" /gene_synonym="JW1520" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74600.1" /db_xref="GI:1787807" /db_xref="ASAP:ABE-0005100" /db_xref="UniProtKB/Swiss-Prot:P76150" /db_xref="EcoGene:EG13819" /translation="MVTPVSISNYISLPDDFPVRNIAPQVKEVLKDFIDALSTIICNE EWRTSLNINSATKKIFNNLDNLSYIQRTSFRGNDTLYNEKVQFKLTYPARNGRHKENI EFQVVINLSPIYLDNFRHDGEINIFCAPNPKPVTMGRVFQTGVERVLFLFLNDFIEQF PMINPGVPIKRAHTPHIEPLPSDHHTAADYLRQFDLLVLNFISRGNFVILPRLWNNSE VHRWFVNKDPNLITAILDITDSELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQE SPHFQNLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKN ETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH" gene 1486549..1487739 /gene="ydeA" /locus_tag="b1528" /gene_synonym="ECK1521" /gene_synonym="JW1521" /gene_synonym="sotB" /db_xref="EcoGene:EG11636" CDS 1486549..1487739 /gene="ydeA" /locus_tag="b1528" /gene_synonym="ECK1521" /gene_synonym="JW1521" /gene_synonym="sotB" /function="transport; Transport of small molecules: sugars" /note="L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015524 - L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="arabinose efflux transporter, arabinose-inducible" /protein_id="AAC74601.1" /db_xref="GI:1787808" /db_xref="ASAP:ABE-0005103" /db_xref="UniProtKB/Swiss-Prot:P31122" /db_xref="EcoGene:EG11636" /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE EQTQ" gene complement(1487764..1488429) /gene="marC" /locus_tag="b1529" /gene_synonym="ECK1522" /gene_synonym="JW1522" /gene_synonym="ydeB" /gene_synonym="ydeC" /db_xref="EcoGene:EG11637" CDS complement(1487764..1488429) /gene="marC" /locus_tag="b1529" /gene_synonym="ECK1522" /gene_synonym="JW1522" /gene_synonym="ydeB" /gene_synonym="ydeC" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0056 family inner membrane protein" /protein_id="AAC74602.1" /db_xref="GI:1787809" /db_xref="ASAP:ABE-0005106" /db_xref="UniProtKB/Swiss-Prot:P0AEY1" /db_xref="EcoGene:EG11637" /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK TYH" gene 1488641..1489075 /gene="marR" /locus_tag="b1530" /gene_synonym="cfxB" /gene_synonym="ECK1523" /gene_synonym="inaR" /gene_synonym="JW5248" /gene_synonym="soxQ" /db_xref="EcoGene:EG11435" CDS 1488641..1489075 /gene="marR" /locus_tag="b1530" /gene_synonym="cfxB" /gene_synonym="ECK1523" /gene_synonym="inaR" /gene_synonym="JW5248" /gene_synonym="soxQ" /function="regulator; Drug/analog sensitivity" /note="multiple antibiotic resistance protein; repressor of mar operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="transcriptional repressor of multiple antibiotic resistance" /protein_id="AAC74603.2" /db_xref="GI:87081927" /db_xref="ASAP:ABE-0005110" /db_xref="UniProtKB/Swiss-Prot:P27245" /db_xref="EcoGene:EG11435" /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT GGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKVLP" gene 1489095..1489478 /gene="marA" /locus_tag="b1531" /gene_synonym="cfxB" /gene_synonym="ECK1524" /gene_synonym="inaR" /gene_synonym="JW5249" /gene_synonym="nfxC" /gene_synonym="norB" /gene_synonym="soxQ" /db_xref="EcoGene:EG11434" CDS 1489095..1489478 /gene="marA" /locus_tag="b1531" /gene_synonym="cfxB" /gene_synonym="ECK1524" /gene_synonym="inaR" /gene_synonym="JW5249" /gene_synonym="nfxC" /gene_synonym="norB" /gene_synonym="soxQ" /function="regulator; Drug/analog sensitivity" /note="multiple antibiotic resistance; transcriptional activator of defense systems; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042493 - response to drug; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="multiple antibiotic resistance transcriptional regulator" /protein_id="AAC74604.2" /db_xref="GI:87081928" /db_xref="ASAP:ABE-0005112" /db_xref="UniProtKB/Swiss-Prot:P0ACH5" /db_xref="EcoGene:EG11434" /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV PPHKYRMTNMQGESRFLHPLNHYNS" gene 1489510..1489728 /gene="marB" /locus_tag="b1532" /gene_synonym="ECK1525" /gene_synonym="JW1525" /db_xref="EcoGene:EG11599" CDS 1489510..1489728 /gene="marB" /locus_tag="b1532" /gene_synonym="ECK1525" /gene_synonym="JW1525" /function="putative transport; Drug/analog sensitivity" /note="multiple antibiotic resistance protein; GO_process: GO:0042493 - response to drug; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="periplasmic mar operon regulator" /protein_id="AAC74605.1" /db_xref="GI:1787812" /db_xref="ASAP:ABE-0005114" /db_xref="UniProtKB/Swiss-Prot:P31121" /db_xref="EcoGene:EG11599" /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEH PPFDLNHMGTGSDKSDALGVPYYNQHAM" gene complement(1489759..1490658) /gene="eamA" /locus_tag="b1533" /gene_synonym="ECK1526" /gene_synonym="JW5250" /gene_synonym="ydeD" /db_xref="EcoGene:EG11639" CDS complement(1489759..1490658) /gene="eamA" /locus_tag="b1533" /gene_synonym="ECK1526" /gene_synonym="JW5250" /gene_synonym="ydeD" /note="amino acid metabolite efflux pump" /codon_start=1 /transl_table=11 /product="cysteine and O-acetyl-L-serine efflux system" /protein_id="AAC74606.2" /db_xref="GI:87081929" /db_xref="ASAP:ABE-0005116" /db_xref="UniProtKB/Swiss-Prot:P31125" /db_xref="EcoGene:EG11639" /translation="MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVA FPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIM LGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNI FNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLM YLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAV LIMTGLYINVFGLRWRKAVKVGS" gene 1490853..1492040 /gene="ydeE" /locus_tag="b1534" /gene_synonym="ECK1527" /gene_synonym="JW1527" /gene_synonym="ydeF" /db_xref="EcoGene:EG11640" CDS 1490853..1492040 /gene="ydeE" /locus_tag="b1534" /gene_synonym="ECK1527" /gene_synonym="JW1527" /gene_synonym="ydeF" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC74607.1" /db_xref="GI:1787815" /db_xref="ASAP:ABE-0005121" /db_xref="UniProtKB/Swiss-Prot:P31126" /db_xref="EcoGene:EG11640" /translation="MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAITLVNNVTLVVLF FALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSI NLPFWLAAICSAFPMLFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLA SFVSGAFASCISQYVMVIADGDFAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRAL MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPEMKAS YFSAQSLGWLGAAINPLVSGVVLTSLPPSSLFVILALVIIAAWVLMLKGIRARPWGQP ALC" gene 1492167..1492262 /gene="yneM" /locus_tag="b4599" /gene_synonym="ECK4409" /db_xref="EcoGene:EG14395" CDS 1492167..1492262 /gene="yneM" /locus_tag="b4599" /gene_synonym="ECK4409" /codon_start=1 /transl_table=11 /product="inner membrane-associated protein" /protein_id="ABP93445.1" /db_xref="GI:145693135" /db_xref="UniProtKB/Swiss-Prot:A5A616" /db_xref="EcoGene:EG14395" /translation="MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD" gene complement(1492338..1492435) /gene="mgrR" /locus_tag="b4698" /gene_synonym="ECK4510" /db_xref="EcoGene:EG31184" ncRNA complement(1492338..1492435) /ncRNA_class="antisense_RNA" /gene="mgrR" /locus_tag="b4698" /gene_synonym="ECK4510" /product="sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides" /db_xref="ASAP:ABE-0285266" /db_xref="EcoGene:EG31184" gene complement(1492481..1493371) /gene="dgcZ" /locus_tag="b1535" /gene_synonym="ECK1528" /gene_synonym="JW1528" /gene_synonym="ydeG" /gene_synonym="ydeH" /db_xref="EcoGene:EG11643" CDS complement(1492481..1493371) /gene="dgcZ" /locus_tag="b1535" /gene_synonym="ECK1528" /gene_synonym="JW1528" /gene_synonym="ydeG" /gene_synonym="ydeH" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, zinc-sensing" /protein_id="AAC74608.1" /db_xref="GI:1787816" /db_xref="ASAP:ABE-0005123" /db_xref="UniProtKB/Swiss-Prot:P31129" /db_xref="EcoGene:EG11643" /translation="MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEIT DNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLY LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEG KQTGRNRCMFIDEQNVINRV" gene complement(1493626..1494018) /gene="ydeI" /locus_tag="b1536" /gene_synonym="ECK1529" /gene_synonym="JW1529" /db_xref="EcoGene:EG11644" CDS complement(1493626..1494018) /gene="ydeI" /locus_tag="b1536" /gene_synonym="ECK1529" /gene_synonym="JW1529" /codon_start=1 /transl_table=11 /product="hydrogen peroxide resistance OB fold protein; putative periplasmic protein" /protein_id="AAC74609.1" /db_xref="GI:1787817" /db_xref="ASAP:ABE-0005127" /db_xref="UniProtKB/Swiss-Prot:P31130" /db_xref="EcoGene:EG11644" /translation="MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGT DDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREV QPDQMINISGSLDKKSAPAVVRVTHLQK" gene 1494294..1494812 /gene="ydeJ" /locus_tag="b1537" /gene_synonym="ECK1530" /gene_synonym="JW1530" /db_xref="EcoGene:EG11645" CDS 1494294..1494812 /gene="ydeJ" /locus_tag="b1537" /gene_synonym="ECK1530" /gene_synonym="JW1530" /codon_start=1 /transl_table=11 /product="inactive PncC family protein" /protein_id="AAC74610.1" /db_xref="GI:1787818" /db_xref="ASAP:ABE-0005131" /db_xref="UniProtKB/Swiss-Prot:P31131" /db_xref="EcoGene:EG11645" /translation="MNINRDKIVQLVDTDTIENLTSALSQRLIADQLRLTTAESCTGG KLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAI ERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAV RFALAQLLQLLL" gene complement(1494856..1496901) /gene="dcp" /locus_tag="b1538" /gene_synonym="ECK1531" /gene_synonym="JW1531" /db_xref="EcoGene:EG10212" CDS complement(1494856..1496901) /gene="dcp" /locus_tag="b1538" /gene_synonym="ECK1531" /gene_synonym="JW1531" /EC_number="3.4.15.5" /function="enzyme; Degradation of proteins, peptides, glyco" /codon_start=1 /transl_table=11 /product="dipeptidyl carboxypeptidase II" /protein_id="AAC74611.1" /db_xref="GI:1787819" /db_xref="ASAP:ABE-0005133" /db_xref="UniProtKB/Swiss-Prot:P24171" /db_xref="EcoGene:EG10212" /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA AIALNPQMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLL GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCNYQ KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD GYQWFVEQGGLTRENGLRFREAILSRGNSEDLERLYRQWRGKAPKIMPMLQHRGLNI" gene 1497038..1497784 /gene="ydfG" /locus_tag="b1539" /gene_synonym="ECK1532" /gene_synonym="JW1532" /db_xref="EcoGene:EG12345" CDS 1497038..1497784 /gene="ydfG" /locus_tag="b1539" /gene_synonym="ECK1532" /gene_synonym="JW1532" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase" /protein_id="AAC74612.1" /db_xref="GI:1787820" /db_xref="ASAP:ABE-0005137" /db_xref="UniProtKB/Swiss-Prot:P39831" /db_xref="EcoGene:EG12345" /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ" gene 1497873..1498559 /gene="rspR" /locus_tag="b1540" /gene_synonym="ECK1533" /gene_synonym="JW1533" /gene_synonym="ydfH" /db_xref="EcoGene:EG13820" CDS 1497873..1498559 /gene="rspR" /locus_tag="b1540" /gene_synonym="ECK1533" /gene_synonym="JW1533" /gene_synonym="ydfH" /function="regulator; Degradation of small molecules" /note="GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor for rspAB" /protein_id="AAC74613.1" /db_xref="GI:1787821" /db_xref="ASAP:ABE-0005144" /db_xref="UniProtKB/Swiss-Prot:P0ACM2" /db_xref="EcoGene:EG13820" /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA SMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK ATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIR QENSDWFSEE" gene 1498736..1498939 /gene="ydfZ" /locus_tag="b1541" /gene_synonym="ECK1534" /gene_synonym="JW1534" /db_xref="EcoGene:EG13838" CDS 1498736..1498939 /gene="ydfZ" /locus_tag="b1541" /gene_synonym="ECK1534" /gene_synonym="JW1534" /codon_start=1 /transl_table=11 /product="selenoprotein, function unknown" /protein_id="AAC74614.1" /db_xref="GI:1787822" /db_xref="ASAP:ABE-0005147" /db_xref="UniProtKB/Swiss-Prot:P64463" /db_xref="EcoGene:EG13838" /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG KTVVVEGCEEKLAPLDLIRLGMN" gene complement(1498974..1500434) /gene="ydfI" /locus_tag="b1542" /gene_synonym="ECK1535" /gene_synonym="JW1535" /db_xref="EcoGene:EG13821" CDS complement(1498974..1500434) /gene="ydfI" /locus_tag="b1542" /gene_synonym="ECK1535" /gene_synonym="JW1535" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative NAD-dependent D-mannonate oxidoreductase" /protein_id="AAC74615.1" /db_xref="GI:1787823" /db_xref="ASAP:ABE-0005149" /db_xref="UniProtKB/Swiss-Prot:P77260" /db_xref="EcoGene:EG13821" /translation="MGNNLLSAKATLPVYDLNNLAPRIVHLGFGAFHRAHQGVYADIL ATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADVWTARVVGVVKKALHVQI DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFP STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP TLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF GDDLPDNSLFTARVTETYLSLLAHGAKATVAKYSVK" gene complement(join(1500523..1501806,1522276..1522359)) /gene="ydfJ" /locus_tag="b4600" /gene_synonym="ECK1536" /gene_synonym="JW1536" /gene_synonym="ynfP" /pseudo /db_xref="EcoGene:EG13822" CDS complement(join(1500523..1501806,1522276..1522359)) /gene="ydfJ" /locus_tag="b4600" /gene_synonym="ECK1536" /gene_synonym="JW1536" /gene_synonym="ynfP" /note="pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005152" /db_xref="ASAP:ABE-0285055" /db_xref="UniProtKB/Swiss-Prot:P77228" /db_xref="EcoGene:EG13822" misc_feature complement(1501807..1522264) /gene="ydfJ" /locus_tag="b4600" /gene_synonym="ECK1536" /gene_synonym="JW1536" /gene_synonym="ynfP" /note="cryptic prophage Qin/Kim" /pseudo gene 1502593..1502826 /gene="ydfK" /locus_tag="b1544" /gene_synonym="ECK1537" /gene_synonym="JW1537" /db_xref="EcoGene:EG13823" CDS 1502593..1502826 /gene="ydfK" /locus_tag="b1544" /gene_synonym="ECK1537" /gene_synonym="JW1537" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="cold shock protein, function unknown, Qin prophage" /protein_id="AAC74617.2" /db_xref="GI:345297174" /db_xref="ASAP:ABE-0005161" /db_xref="UniProtKB/Swiss-Prot:P76154" /db_xref="EcoGene:EG13823" /translation="MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYI EGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM" gene 1503143..1503733 /gene="pinQ" /locus_tag="b1545" /gene_synonym="ECK1538" /gene_synonym="JW1538" /gene_synonym="ydfL" /db_xref="EcoGene:EG13824" CDS 1503143..1503733 /gene="pinQ" /locus_tag="b1545" /gene_synonym="ECK1538" /gene_synonym="JW1538" /gene_synonym="ydfL" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; putative site-specific recombinase" /protein_id="AAC74618.1" /db_xref="GI:1787827" /db_xref="ASAP:ABE-0005164" /db_xref="UniProtKB/Swiss-Prot:P77170" /db_xref="EcoGene:EG13824" /translation="MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGS AATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGG IDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAV FERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI" gene complement(1503831..1504406) /gene="tfaQ" /locus_tag="b1546" /gene_synonym="ECK1539" /gene_synonym="JW1539" /gene_synonym="ydfM" /db_xref="EcoGene:EG13825" CDS complement(1503831..1504406) /gene="tfaQ" /locus_tag="b1546" /gene_synonym="ECK1539" /gene_synonym="JW1539" /gene_synonym="ydfM" /function="Phage or Prophage Related" /note="tail fiber assembly protein homolog from lambdoid prophage Qin" /codon_start=1 /transl_table=11 /product="Qin prophage; putative tail fibre assembly protein" /protein_id="AAC74619.1" /db_xref="GI:2367120" /db_xref="ASAP:ABE-0005166" /db_xref="UniProtKB/Swiss-Prot:P76155" /db_xref="EcoGene:EG13825" /translation="MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTD IAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSP EGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEE ISLLEAWKKYRVLLNRVDTSTAQDIEWPALP" gene complement(1504406..1505368) /gene="stfQ" /locus_tag="b1547" /gene_synonym="ECK1540" /gene_synonym="JW1540" /gene_synonym="ydfN" /db_xref="EcoGene:EG13826" CDS complement(1504406..1505368) /gene="stfQ" /locus_tag="b1547" /gene_synonym="ECK1540" /gene_synonym="JW1540" /gene_synonym="ydfN" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; putative side tail fibre assembly protein" /protein_id="AAC74620.1" /db_xref="GI:1787829" /db_xref="ASAP:ABE-0005168" /db_xref="UniProtKB/Swiss-Prot:P77515" /db_xref="EcoGene:EG13826" /translation="MNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGE GELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSD TVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIK SHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGG TNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAH TVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA" gene complement(1505361..1505888) /gene="nohQ" /locus_tag="b1548" /gene_synonym="ECK1541" /gene_synonym="JW1541" /gene_synonym="nohA" /pseudo /db_xref="EcoGene:EG11634" CDS complement(1505361..1505888) /gene="nohQ" /locus_tag="b1548" /gene_synonym="ECK1541" /gene_synonym="JW1541" /gene_synonym="nohA" /note="pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005172" /db_xref="UniProtKB/Swiss-Prot:P31061" /db_xref="EcoGene:EG11634" gene 1506277..1506510 /gene="ynfO" /locus_tag="b4533" /gene_synonym="ECK1542" /gene_synonym="JW5251" /db_xref="EcoGene:EG14422" CDS 1506277..1506510 /gene="ynfO" /locus_tag="b4533" /gene_synonym="ECK1542" /gene_synonym="JW5251" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="uncharacterized protein, Qin prophage" /protein_id="ABD18667.1" /db_xref="GI:87081930" /db_xref="ASAP:ABE-0285054" /db_xref="UniProtKB/Swiss-Prot:Q2EES0" /db_xref="EcoGene:EG14422" /translation="MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEA CRRRLCSEKRVSSEANKEKSDITELLRKQVRPD" gene 1506568..1506978 /gene="ydfO" /locus_tag="b1549" /gene_synonym="ECK1543" /gene_synonym="JW5252" /db_xref="EcoGene:EG13827" CDS 1506568..1506978 /gene="ydfO" /locus_tag="b1549" /gene_synonym="ECK1543" /gene_synonym="JW5252" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74622.2" /db_xref="GI:87081931" /db_xref="ASAP:ABE-0005175" /db_xref="UniProtKB/Swiss-Prot:P76156" /db_xref="EcoGene:EG13827" /translation="MDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENV HIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFR WVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR" gene complement(1507130..1507303) /gene="gnsB" /locus_tag="b1550" /gene_synonym="ECK1544" /gene_synonym="JW5253" /gene_synonym="ydfY" /db_xref="EcoGene:EG13837" CDS complement(1507130..1507303) /gene="gnsB" /locus_tag="b1550" /gene_synonym="ECK1544" /gene_synonym="JW5253" /gene_synonym="ydfY" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts)" /protein_id="AAC74623.2" /db_xref="GI:87081932" /db_xref="ASAP:ABE-0005177" /db_xref="UniProtKB/Swiss-Prot:P77695" /db_xref="EcoGene:EG13837" /translation="MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKM TGLESYDVKINLI" gene complement(1507475..1507630) /gene="ynfN" /locus_tag="b1551" /gene_synonym="ECK1545" /gene_synonym="JW5254" /db_xref="EcoGene:EG14388" CDS complement(1507475..1507630) /gene="ynfN" /locus_tag="b1551" /gene_synonym="ECK1545" /gene_synonym="JW5254" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; cold shock-induced protein" /protein_id="AAC74624.2" /db_xref="GI:87081933" /db_xref="ASAP:ABE-0005180" /db_xref="UniProtKB/Swiss-Prot:P76157" /db_xref="EcoGene:EG14388" /translation="MREYPNGEKTHLTVMAAGFPSLTGDHKVIYVAADRHVTSEEILE AAIRLLS" gene complement(1507976..1508188) /gene="cspI" /locus_tag="b1552" /gene_synonym="cspJ" /gene_synonym="ECK1546" /gene_synonym="JW1544" /db_xref="EcoGene:EG13877" CDS complement(1507976..1508188) /gene="cspI" /locus_tag="b1552" /gene_synonym="cspJ" /gene_synonym="ECK1546" /gene_synonym="JW1544" /function="Phage or Prophage Related" /note="cold shock-like protein" /codon_start=1 /transl_table=11 /product="Qin prophage; cold shock protein" /protein_id="AAC74625.1" /db_xref="GI:1787834" /db_xref="ASAP:ABE-0005183" /db_xref="UniProtKB/Swiss-Prot:P0A986" /db_xref="EcoGene:EG13877" /translation="MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT LTENQEVEFGIENGPKGPAAVHVVAL" gene complement(1508551..1509048) /gene="rzpQ" /locus_tag="b1553" /gene_synonym="ECK1547" /gene_synonym="JW1545" /gene_synonym="Rz" /gene_synonym="ydfP" /db_xref="EcoGene:EG13828" CDS complement(1508551..1509048) /gene="rzpQ" /locus_tag="b1553" /gene_synonym="ECK1547" /gene_synonym="JW1545" /gene_synonym="Rz" /gene_synonym="ydfP" /function="Phage or Prophage Related" /note="completely contained in another CDS" /codon_start=1 /transl_table=11 /product="Rz-like protein, Qin prophage" /protein_id="AAC74626.1" /db_xref="GI:1787835" /db_xref="ASAP:ABE-0005187" /db_xref="UniProtKB/Swiss-Prot:P76158" /db_xref="EcoGene:EG13828" /translation="MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNA QFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAK HTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRD KKHQM" gene complement(1508601..1508855) /gene="rzoQ" /locus_tag="b4689" /gene_synonym="ECK4503" /gene_synonym="Rz1" /db_xref="EcoGene:EG14493" CDS complement(1508601..1508855) /gene="rzoQ" /locus_tag="b4689" /gene_synonym="ECK4503" /gene_synonym="Rz1" /note="completely contained in another CDS" /codon_start=1 /transl_table=11 /product="putative Rz1-like lipoprotein, Qin prophage" /protein_id="ACO59993.1" /db_xref="GI:226510942" /db_xref="UniProtKB/Swiss-Prot:C1P601" /db_xref="EcoGene:EG14493" /translation="MRNRNLLKFLPGLLICLIVLTSCVPKQKNMPYALTQRSIPQILP LPSEAKQPKPPKECSPTCSEILQQKLSFMLKLLTNATSQE" gene complement(1509045..1509578) /gene="rrrQ" /locus_tag="b1554" /gene_synonym="arrQ" /gene_synonym="ECK1548" /gene_synonym="JW1546" /gene_synonym="ydfQ" /db_xref="EcoGene:EG13829" CDS complement(1509045..1509578) /gene="rrrQ" /locus_tag="b1554" /gene_synonym="arrQ" /gene_synonym="ECK1548" /gene_synonym="JW1546" /gene_synonym="ydfQ" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; putative lysozyme" /protein_id="AAC74627.1" /db_xref="GI:1787836" /db_xref="ASAP:ABE-0005189" /db_xref="UniProtKB/Swiss-Prot:P76159" /db_xref="EcoGene:EG13829" /translation="MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRD GSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK AGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQ VIRRDQESALTCWGIEQ" gene complement(1509575..1509886) /gene="ydfR" /locus_tag="b1555" /gene_synonym="ECK1549" /gene_synonym="JW1547" /db_xref="EcoGene:EG13830" CDS complement(1509575..1509886) /gene="ydfR" /locus_tag="b1555" /gene_synonym="ECK1549" /gene_synonym="JW1547" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74628.1" /db_xref="GI:1787837" /db_xref="ASAP:ABE-0005192" /db_xref="UniProtKB/Swiss-Prot:P76160" /db_xref="EcoGene:EG13830" /translation="MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDR VEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKY L" gene complement(1509891..1510106) /gene="essQ" /locus_tag="b1556" /gene_synonym="ECK1550" /gene_synonym="JW5255" /gene_synonym="ydfS" /db_xref="EcoGene:EG13831" CDS complement(1509891..1510106) /gene="essQ" /locus_tag="b1556" /gene_synonym="ECK1550" /gene_synonym="JW5255" /gene_synonym="ydfS" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; putative S lysis protein" /protein_id="AAC74629.2" /db_xref="GI:87081934" /db_xref="ASAP:ABE-0005197" /db_xref="UniProtKB/Swiss-Prot:P77237" /db_xref="EcoGene:EG13831" /translation="MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGS LVFGLLTYLTNLYFKIKEDRRKAARGE" gene complement(1510860..1511075) /gene="cspB" /locus_tag="b1557" /gene_synonym="ECK1551" /gene_synonym="JW1549" /db_xref="EcoGene:EG12203" CDS complement(1510860..1511075) /gene="cspB" /locus_tag="b1557" /gene_synonym="ECK1551" /gene_synonym="JW1549" /function="phenotype; Adaptations, atypical conditions; Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; cold shock protein" /protein_id="AAC74630.1" /db_xref="GI:1787839" /db_xref="ASAP:ABE-0005199" /db_xref="UniProtKB/Swiss-Prot:P36995" /db_xref="EcoGene:EG12203" /translation="MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRT LFEGQKVTFSIESGAKGPAAANVIITD" gene 1511376..1511588 /gene="cspF" /locus_tag="b1558" /gene_synonym="ECK1552" /gene_synonym="JW1550" /db_xref="EcoGene:EG12205" CDS 1511376..1511588 /gene="cspF" /locus_tag="b1558" /gene_synonym="ECK1552" /gene_synonym="JW1550" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; cold shock protein" /protein_id="AAC74631.1" /db_xref="GI:1787840" /db_xref="ASAP:ABE-0005205" /db_xref="UniProtKB/Swiss-Prot:P0A976" /db_xref="EcoGene:EG12205" /translation="MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEE ITTGLRVEFCRINGLRGPSAANVYLS" gene complement(1512010..1512762) /gene="quuQ" /locus_tag="b1559" /gene_synonym="ECK1553" /gene_synonym="JW1551" /gene_synonym="ydfT" /db_xref="EcoGene:EG13832" CDS complement(1512010..1512762) /gene="quuQ" /locus_tag="b1559" /gene_synonym="ECK1553" /gene_synonym="JW1551" /gene_synonym="ydfT" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; putative antitermination protein Q" /protein_id="AAC74632.2" /db_xref="GI:87081935" /db_xref="ASAP:ABE-0005207" /db_xref="UniProtKB/Swiss-Prot:P76161" /db_xref="EcoGene:EG13832" /translation="MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSK APLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFAD YSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTA CRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQ WYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR" gene complement(1512776..1513825) /gene="ydfU" /locus_tag="b1560" /gene_synonym="ECK1554" /gene_synonym="JW5909" /db_xref="EcoGene:EG13833" CDS complement(1512776..1513825) /gene="ydfU" /locus_tag="b1560" /gene_synonym="ECK1554" /gene_synonym="JW5909" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74633.4" /db_xref="GI:226510943" /db_xref="ASAP:ABE-0005209" /db_xref="UniProtKB/Swiss-Prot:P76162" /db_xref="EcoGene:EG13833" /translation="MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRN LPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHH TETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERE LSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQR TKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPC ACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLEL IFRFIDRALAIGVLA" gene complement(1514172..1514423) /gene="rem" /locus_tag="b1561" /gene_synonym="ECK1555" /gene_synonym="JW1553" /db_xref="EcoGene:EG11129" CDS complement(1514172..1514423) /gene="rem" /locus_tag="b1561" /gene_synonym="ECK1555" /gene_synonym="JW1553" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74634.1" /db_xref="GI:1787844" /db_xref="ASAP:ABE-0005215" /db_xref="UniProtKB/Swiss-Prot:P07010" /db_xref="EcoGene:EG11129" /translation="MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALIN FVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE" gene complement(1514640..1514795) /gene="hokD" /locus_tag="b1562" /gene_synonym="ECK1556" /gene_synonym="JW1554" /gene_synonym="relF" /db_xref="EcoGene:EG11130" CDS complement(1514640..1514795) /gene="hokD" /locus_tag="b1562" /gene_synonym="ECK1556" /gene_synonym="JW1554" /gene_synonym="relF" /function="factor; Cell killing" /note="polypeptide destructive to membrane potential; hokD (relF) regulatory elements are deleted, and the gene is fused to the relBE transcript; evolutionary relic?" /codon_start=1 /transl_table=11 /product="Qin prophage; small toxic polypeptide" /protein_id="AAC74635.1" /db_xref="GI:1787845" /db_xref="ASAP:ABE-0005219" /db_xref="UniProtKB/Swiss-Prot:P0ACG6" /db_xref="EcoGene:EG11130" /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF TAYEPEE" gene complement(1514867..1515154) /gene="relE" /locus_tag="b1563" /gene_synonym="ECK1557" /gene_synonym="JW1555" /db_xref="EcoGene:EG11131" CDS complement(1514867..1515154) /gene="relE" /locus_tag="b1563" /gene_synonym="ECK1557" /gene_synonym="JW1555" /function="Phage or Prophage Related" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="Qin prophage; toxin of the RelE-RelB toxin-antitoxin system" /protein_id="AAC74636.1" /db_xref="GI:1787846" /db_xref="ASAP:ABE-0005221" /db_xref="UniProtKB/Swiss-Prot:P0C077" /db_xref="EcoGene:EG11131" /translation="MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKL RGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL" gene complement(1515154..1515393) /gene="relB" /locus_tag="b1564" /gene_synonym="ECK1558" /gene_synonym="JW1556" /gene_synonym="RC" /db_xref="EcoGene:EG10836" CDS complement(1515154..1515393) /gene="relB" /locus_tag="b1564" /gene_synonym="ECK1558" /gene_synonym="JW1556" /gene_synonym="RC" /function="regulator; Global regulatory functions; Phage or Prophage Related" /note="negative regulator of translation; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="antitoxin of the RelE-RelB toxin-antitoxin syste; transcriptional repressor" /protein_id="AAC74637.1" /db_xref="GI:1787847" /db_xref="ASAP:ABE-0005224" /db_xref="UniProtKB/Swiss-Prot:P0C079" /db_xref="EcoGene:EG10836" /translation="MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERL PFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL" gene 1515418..1515723 /gene="ydfV" /locus_tag="b1565" /gene_synonym="ECK1559" /gene_synonym="JW1557" /db_xref="EcoGene:EG13834" CDS 1515418..1515723 /gene="ydfV" /locus_tag="b1565" /gene_synonym="ECK1559" /gene_synonym="JW1557" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74638.1" /db_xref="GI:1787848" /db_xref="ASAP:ABE-0005231" /db_xref="UniProtKB/Swiss-Prot:P76163" /db_xref="EcoGene:EG13834" /translation="MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYC AGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR" gene 1515926..1516258 /gene="flxA" /locus_tag="b1566" /gene_synonym="ECK1560" /gene_synonym="JW1558" /db_xref="EcoGene:EG13429" CDS 1515926..1516258 /gene="flxA" /locus_tag="b1566" /gene_synonym="ECK1560" /gene_synonym="JW1558" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74639.1" /db_xref="GI:1787849" /db_xref="ASAP:ABE-0005234" /db_xref="UniProtKB/Swiss-Prot:P77609" /db_xref="EcoGene:EG13429" /translation="MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISS EEGMTTQQKKEMAALVQKQIESLWAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNT AGTIDIYV" gene complement(1516695..1516877) /gene="intK" /locus_tag="b1567" /gene_synonym="ECK1561" /gene_synonym="JW1559" /gene_synonym="ydfW" /pseudo /db_xref="EcoGene:EG13835" CDS complement(1516695..1516877) /gene="intK" /locus_tag="b1567" /gene_synonym="ECK1561" /gene_synonym="JW1559" /gene_synonym="ydfW" /note="pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005236" /db_xref="UniProtKB/Swiss-Prot:P76164" /db_xref="EcoGene:EG13835" gene complement(1516879..1517157) /gene="ydfX" /locus_tag="b1568" /gene_synonym="ECK1562" /gene_synonym="JW1560" /pseudo /db_xref="EcoGene:EG13836" CDS complement(1516879..1517157) /gene="ydfX" /locus_tag="b1568" /gene_synonym="ECK1562" /gene_synonym="JW1560" /note="pseudogene, Qin prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005239" /db_xref="UniProtKB/Swiss-Prot:P76165" /db_xref="EcoGene:EG13836" gene complement(1517141..1517371) /gene="dicC" /locus_tag="b1569" /gene_synonym="ECK1563" /gene_synonym="ftsT" /gene_synonym="JW1561" /db_xref="EcoGene:EG10228" CDS complement(1517141..1517371) /gene="dicC" /locus_tag="b1569" /gene_synonym="ECK1563" /gene_synonym="ftsT" /gene_synonym="JW1561" /function="regulator; Cell division; Phage or Prophage Related" /note="regulator of dicB" /codon_start=1 /transl_table=11 /product="Qin prophage; DNA-binding transcriptional regulator for DicB" /protein_id="AAC74642.1" /db_xref="GI:1787852" /db_xref="ASAP:ABE-0005244" /db_xref="UniProtKB/Swiss-Prot:P06965" /db_xref="EcoGene:EG10228" /translation="MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQ EASGGELQYDPKVYDEYRKTKRAGRLNNENHS" gene 1517455..1517862 /gene="dicA" /locus_tag="b1570" /gene_synonym="ECK1564" /gene_synonym="ftsT" /gene_synonym="JW1562" /db_xref="EcoGene:EG10226" CDS 1517455..1517862 /gene="dicA" /locus_tag="b1570" /gene_synonym="ECK1564" /gene_synonym="ftsT" /gene_synonym="JW1562" /function="regulator; Cell division; Phage or Prophage Related" /note="regulator of dicB" /codon_start=1 /transl_table=11 /product="Qin prophage; putative regulator for DicB" /protein_id="AAC74643.1" /db_xref="GI:1787853" /db_xref="ASAP:ABE-0005248" /db_xref="UniProtKB/Swiss-Prot:P06966" /db_xref="EcoGene:EG10226" /translation="METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGD SEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPES EQDTQLAEMRARVKNFNKLFEELLKARQRTNKR" gene 1518029..1518184 /gene="ydfA" /locus_tag="b1571" /gene_synonym="ECK1565" /gene_synonym="JW1563" /db_xref="EcoGene:EG11300" CDS 1518029..1518184 /gene="ydfA" /locus_tag="b1571" /gene_synonym="ECK1565" /gene_synonym="JW1563" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74644.1" /db_xref="GI:1787854" /db_xref="ASAP:ABE-0005251" /db_xref="UniProtKB/Swiss-Prot:P0ACW8" /db_xref="EcoGene:EG11300" /translation="MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRW LERNSGE" gene 1518186..1518314 /gene="ydfB" /locus_tag="b1572" /gene_synonym="ECK1566" /gene_synonym="JW1564" /db_xref="EcoGene:EG11301" CDS 1518186..1518314 /gene="ydfB" /locus_tag="b1572" /gene_synonym="ECK1566" /gene_synonym="JW1564" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74645.2" /db_xref="GI:87081937" /db_xref="ASAP:ABE-0005253" /db_xref="UniProtKB/Swiss-Prot:P29009" /db_xref="EcoGene:EG11301" /translation="MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG" gene 1518344..1518562 /gene="ydfC" /locus_tag="b1573" /gene_synonym="ECK1567" /gene_synonym="JW1565" /db_xref="EcoGene:EG11302" CDS 1518344..1518562 /gene="ydfC" /locus_tag="b1573" /gene_synonym="ECK1567" /gene_synonym="JW1565" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="uncharacterized protein, Qin prophage" /protein_id="AAC74646.1" /db_xref="GI:1787856" /db_xref="ASAP:ABE-0005255" /db_xref="UniProtKB/Swiss-Prot:P21418" /db_xref="EcoGene:EG11302" /translation="MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAE NLSALEQDITNLEKAAALSIARMITYPR" gene 1518903..1518955 /gene="dicF" /locus_tag="b1574" /gene_synonym="ECK1568" /gene_synonym="JWR0030" /db_xref="EcoGene:EG31115" ncRNA 1518903..1518955 /ncRNA_class="antisense_RNA" /gene="dicF" /locus_tag="b1574" /gene_synonym="ECK1568" /gene_synonym="JWR0030" /product="sRNA antisense regulator, inhibits ftsZ, Hfq-dependent; Qin prophage" /note="DicF antisense RNA, inhibits ftsZ translation" /db_xref="ASAP:ABE-0005257" /db_xref="EcoGene:EG31115" gene 1519130..1519318 /gene="dicB" /locus_tag="b1575" /gene_synonym="ECK1569" /gene_synonym="ftsT" /gene_synonym="JW1566" /db_xref="EcoGene:EG10227" CDS 1519130..1519318 /gene="dicB" /locus_tag="b1575" /gene_synonym="ECK1569" /gene_synonym="ftsT" /gene_synonym="JW1566" /function="regulator; Cell division; Phage or Prophage Related" /note="inhibition of cell division" /codon_start=1 /transl_table=11 /product="Qin prophage; cell division inhibition protein" /protein_id="AAC74647.1" /db_xref="GI:1787857" /db_xref="ASAP:ABE-0005260" /db_xref="UniProtKB/Swiss-Prot:P09557" /db_xref="EcoGene:EG10227" /translation="MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKI CIVSMLARLRLMPKGCAQ" gene 1519315..1519506 /gene="ydfD" /locus_tag="b1576" /gene_synonym="ECK1570" /gene_synonym="JW1567" /db_xref="EcoGene:EG11303" CDS 1519315..1519506 /gene="ydfD" /locus_tag="b1576" /gene_synonym="ECK1570" /gene_synonym="JW1567" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="Qin prophage; uncharacterized protein" /protein_id="AAC74648.1" /db_xref="GI:1787858" /db_xref="ASAP:ABE-0005262" /db_xref="UniProtKB/Swiss-Prot:P29010" /db_xref="EcoGene:EG11303" /translation="MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGN CYPVDKVIHQDNIEIPAGL" gene 1519599..1520363 /gene="ydfE" /locus_tag="b1577" /gene_synonym="ECK1571" /gene_synonym="JW1568" /pseudo /db_xref="EcoGene:EG11304" CDS 1519599..1520363 /gene="ydfE" /locus_tag="b1577" /gene_synonym="ECK1571" /gene_synonym="JW1568" /note="Qin prophage; pseudogene;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005265" /db_xref="UniProtKB/Swiss-Prot:Q47138" /db_xref="EcoGene:EG11304" mobile_element 1520364..1521069 /mobile_element_type="insertion sequence:IS2E" gene 1520366..1521058 /gene="insD1" /locus_tag="b1578" /gene_synonym="ECK0358" /pseudo /db_xref="EcoGene:EG40004" CDS 1520366..1521058 /gene="insD1" /locus_tag="b1578" /gene_synonym="ECK0358" /note="IS2 transposase TnpB;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005268" /db_xref="UniProtKB/Swiss-Prot:P0CF60" /db_xref="EcoGene:EG40004" gene 1521072..1522229 /gene="intQ" /locus_tag="b1579" /gene_synonym="ECK1573" /gene_synonym="JW1571" /pseudo /db_xref="EcoGene:EG13188" CDS 1521072..1522229 /gene="intQ" /locus_tag="b1579" /gene_synonym="ECK1573" /gene_synonym="JW1571" /note="pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005270" /db_xref="UniProtKB/Swiss-Prot:P76168" /db_xref="EcoGene:EG13188" gene complement(1522417..1523436) /gene="rspB" /locus_tag="b1580" /gene_synonym="ECK1575" /gene_synonym="JW1572" /db_xref="EcoGene:EG12452" CDS complement(1522417..1523436) /gene="rspB" /locus_tag="b1580" /gene_synonym="ECK1575" /gene_synonym="JW1572" /function="enzyme; Global regulatory functions" /note="starvation sensing protein; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC74652.1" /db_xref="GI:1787863" /db_xref="ASAP:ABE-0005272" /db_xref="UniProtKB/Swiss-Prot:P38105" /db_xref="EcoGene:EG12452" /translation="MKSILIEKPNQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIY RGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNV CTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTE NDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPL GEIFTEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKE LSIFSSRLNANKFPIVIDWLSKGLIKPEKLITHTFDFQHVADAISLFEQDQKHCCKVL LTFSE" gene complement(1523448..1524662) /gene="rspA" /locus_tag="b1581" /gene_synonym="ECK1576" /gene_synonym="JW1573" /db_xref="EcoGene:EG12451" CDS complement(1523448..1524662) /gene="rspA" /locus_tag="b1581" /gene_synonym="ECK1576" /gene_synonym="JW1573" /function="phenotype; Global regulatory functions" /note="starvation sensing protein; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="bifunctional D-altronate/D-mannonate dehydratase" /protein_id="AAC74653.1" /db_xref="GI:1787864" /db_xref="ASAP:ABE-0005275" /db_xref="UniProtKB/Swiss-Prot:P38104" /db_xref="EcoGene:EG12451" /translation="MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVA SYLQDHLCPQLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAAN MPLYQLLGGASREGVMVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYG MSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLT PIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLI EEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWV PNFGVQEYMGYSEQMLEVFPHNWTFDNGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLP VARLEDGTLWNW" gene complement(1524868..1525194) /gene="ynfA" /locus_tag="b1582" /gene_synonym="ECK1577" /gene_synonym="JW1574" /db_xref="EcoGene:EG13839" CDS complement(1524868..1525194) /gene="ynfA" /locus_tag="b1582" /gene_synonym="ECK1577" /gene_synonym="JW1574" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0060 family inner membrane protein" /protein_id="AAC74654.1" /db_xref="GI:1787865" /db_xref="ASAP:ABE-0005279" /db_xref="UniProtKB/Swiss-Prot:P76169" /db_xref="EcoGene:EG13839" /translation="MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLAL FVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIV AGWGRT" gene 1525329..1525670 /gene="ynfB" /locus_tag="b1583" /gene_synonym="ECK1578" /gene_synonym="JW1575" /db_xref="EcoGene:EG13840" CDS 1525329..1525670 /gene="ynfB" /locus_tag="b1583" /gene_synonym="ECK1578" /gene_synonym="JW1575" /codon_start=1 /transl_table=11 /product="UPF0482 family putative periplasmic protein" /protein_id="AAC74655.1" /db_xref="GI:1787866" /db_xref="ASAP:ABE-0005284" /db_xref="UniProtKB/Swiss-Prot:P76170" /db_xref="EcoGene:EG13840" /translation="MKITLSKRIGLLAILLPCALALSTTVHAETNKLVIESGDSAQSR QHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRC LDRRTGRVITP" gene 1525705..1526265 /gene="speG" /locus_tag="b1584" /gene_synonym="ECK1579" /gene_synonym="JW1576" /db_xref="EcoGene:EG12447" CDS 1525705..1526265 /gene="speG" /locus_tag="b1584" /gene_synonym="ECK1579" /gene_synonym="JW1576" /EC_number="2.3.1.57" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="spermidine N(1)-acetyltransferase" /protein_id="AAC74656.1" /db_xref="GI:1787867" /db_xref="ASAP:ABE-0005286" /db_xref="UniProtKB/Swiss-Prot:P0A951" /db_xref="EcoGene:EG12447" /translation="MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVEL SDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATR AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAI RMCIFQHQYLAEHKTPGQTLLKPTAQ" gene complement(1526268..1526978) /gene="ynfC" /locus_tag="b1585" /gene_synonym="ECK1580" /gene_synonym="JW5258" /db_xref="EcoGene:EG13841" CDS complement(1526268..1526978) /gene="ynfC" /locus_tag="b1585" /gene_synonym="ECK1580" /gene_synonym="JW5258" /codon_start=1 /transl_table=11 /product="UPF0257 family lipoprotein" /protein_id="AAC74657.2" /db_xref="GI:87081939" /db_xref="ASAP:ABE-0005288" /db_xref="UniProtKB/Swiss-Prot:P67553" /db_xref="EcoGene:EG13841" /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG VKPAVERVYTIKNTIDYY" gene 1527086..1527391 /gene="ynfD" /locus_tag="b1586" /gene_synonym="ECK1581" /gene_synonym="JW5259" /db_xref="EcoGene:EG13842" CDS 1527086..1527391 /gene="ynfD" /locus_tag="b1586" /gene_synonym="ECK1581" /gene_synonym="JW5259" /codon_start=1 /transl_table=11 /product="DUF1161 family periplasmic protein" /protein_id="AAC74658.2" /db_xref="GI:87081940" /db_xref="ASAP:ABE-0005297" /db_xref="UniProtKB/Swiss-Prot:P76172" /db_xref="EcoGene:EG13842" /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSGNVSAPAQSSQDGAPAEPQ" repeat_region 1527409..1527429 /note="REP124 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1527590..1530016 /gene="ynfE" /locus_tag="b1587" /gene_synonym="ECK1582" /gene_synonym="JW1579" /db_xref="EcoGene:EG13843" CDS 1527590..1530016 /gene="ynfE" /locus_tag="b1587" /gene_synonym="ECK1582" /gene_synonym="JW1579" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative selenate reductase, periplasmic" /protein_id="AAC74659.1" /db_xref="GI:1787870" /db_xref="ASAP:ABE-0005302" /db_xref="UniProtKB/Swiss-Prot:P77374" /db_xref="EcoGene:EG13843" /translation="MSKNERMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRNAAAAV QQAREKVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSI RRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYS SGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTD IENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWL PIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGE GDDKTAKTPQWASQITGIPEDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIA MLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTA IRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTS SAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKR LGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYK AFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPER RTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNHR GEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQ HTNLVEIEKI" gene 1530077..1532500 /gene="ynfF" /locus_tag="b1588" /gene_synonym="ECK1583" /gene_synonym="JW5260" /db_xref="EcoGene:EG13844" CDS 1530077..1532500 /gene="ynfF" /locus_tag="b1588" /gene_synonym="ECK1583" /gene_synonym="JW5260" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="S- and N-oxide reductase, A subunit, periplasmic" /protein_id="AAC74660.4" /db_xref="GI:171474008" /db_xref="ASAP:ABE-0005307" /db_xref="UniProtKB/Swiss-Prot:P77783" /db_xref="EcoGene:EG13844" /translation="MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVR AAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRG RSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHV LYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDI ANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLP IRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEG PDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAM LSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTAT RDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTAS AKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRL GPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEHYVAFRA FREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRK TYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNG EMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSH SNLVQIEKV" gene 1532511..1533128 /gene="ynfG" /locus_tag="b1589" /gene_synonym="ECK1584" /gene_synonym="JW1581" /db_xref="EcoGene:EG13845" CDS 1532511..1533128 /gene="ynfG" /locus_tag="b1589" /gene_synonym="ECK1584" /gene_synonym="JW1581" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="oxidoreductase, Fe-S subunit" /protein_id="AAC74661.1" /db_xref="GI:1787872" /db_xref="ASAP:ABE-0005309" /db_xref="UniProtKB/Swiss-Prot:P0AAJ1" /db_xref="EcoGene:EG13845" /translation="MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAG GDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGC RYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV" gene 1533130..1533984 /gene="ynfH" /locus_tag="b1590" /gene_synonym="ECK1585" /gene_synonym="JW5261" /db_xref="EcoGene:EG13846" CDS 1533130..1533984 /gene="ynfH" /locus_tag="b1590" /gene_synonym="ECK1585" /gene_synonym="JW5261" /function="putative enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="oxidoreductase, membrane subunit" /protein_id="AAC74662.1" /db_xref="GI:1787873" /db_xref="ASAP:ABE-0005311" /db_xref="UniProtKB/Swiss-Prot:P76173" /db_xref="EcoGene:EG13846" /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIV RGMFFLWLLMGVGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL VAVIGKMPQALGKLWLLFSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS GPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP DYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHM TVGMAIAG" gene 1534027..1534641 /gene="dmsD" /locus_tag="b1591" /gene_synonym="ECK1586" /gene_synonym="JW5262" /gene_synonym="ynfI" /db_xref="EcoGene:EG13847" CDS 1534027..1534641 /gene="dmsD" /locus_tag="b1591" /gene_synonym="ECK1586" /gene_synonym="JW5262" /gene_synonym="ynfI" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="twin-argninine leader-binding protein for DmsA and TorA" /protein_id="AAC74663.2" /db_xref="GI:87081942" /db_xref="ASAP:ABE-0005314" /db_xref="UniProtKB/Swiss-Prot:P69853" /db_xref="EcoGene:EG13847" /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS TLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST RFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR" repeat_region 1534657..1534687 /note="REP125 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1534836..1536092 /gene="clcB" /locus_tag="b1592" /gene_synonym="ECK1587" /gene_synonym="JW5263" /gene_synonym="mriT" /gene_synonym="ynfJ" /db_xref="EcoGene:EG13848" CDS 1534836..1536092 /gene="clcB" /locus_tag="b1592" /gene_synonym="ECK1587" /gene_synonym="JW5263" /gene_synonym="mriT" /gene_synonym="ynfJ" /function="transport; Not classified" /codon_start=1 /transl_table=11 /product="H(+)/Cl(-) exchange transporter" /protein_id="AAC74664.2" /db_xref="GI:87081943" /db_xref="ASAP:ABE-0005317" /db_xref="UniProtKB/Swiss-Prot:P76175" /db_xref="EcoGene:EG13848" /translation="MFHRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNA ATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLV KSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAY RAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQA RDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPA VWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGM LYGRSLGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLI ACVIASVISRTLHRDSIYRQHTAQHS" gene complement(1536045..1536740) /gene="ynfK" /locus_tag="b1593" /gene_synonym="ECK1588" /gene_synonym="JW5264" /db_xref="EcoGene:EG13849" CDS complement(1536045..1536740) /gene="ynfK" /locus_tag="b1593" /gene_synonym="ECK1588" /gene_synonym="JW5264" /note="GO_process: GO:0009102 - biotin biosynthetic process" /codon_start=1 /transl_table=11 /product="putative dethiobiotin synthetase" /protein_id="AAC74665.2" /db_xref="GI:87081944" /db_xref="ASAP:ABE-0005319" /db_xref="UniProtKB/Swiss-Prot:P0A6E9" /db_xref="EcoGene:EG13849" /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL TEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA MLRSVLAVDRVTV" gene complement(1536865..1538085) /gene="mlc" /locus_tag="b1594" /gene_synonym="dgsA" /gene_synonym="ECK1589" /gene_synonym="JW1586" /db_xref="EcoGene:EG13156" CDS complement(1536865..1538085) /gene="mlc" /locus_tag="b1594" /gene_synonym="dgsA" /gene_synonym="ECK1589" /gene_synonym="JW1586" /function="regulator; Not classified" /note="putative NAGC-like transcriptional regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0000271 - polysaccharide biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="glucosamine anaerobic growth regulon transcriptional repressor; autorepressor" /protein_id="AAC74666.1" /db_xref="GI:1787878" /db_xref="ASAP:ABE-0005323" /db_xref="UniProtKB/Swiss-Prot:P50456" /db_xref="EcoGene:EG13156" /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILE LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKD AMYNGSLLIRLLQG" gene complement(1538220..1539113) /gene="ynfL" /locus_tag="b1595" /gene_synonym="ECK1590" /gene_synonym="JW1587" /db_xref="EcoGene:EG13850" CDS complement(1538220..1539113) /gene="ynfL" /locus_tag="b1595" /gene_synonym="ECK1590" /gene_synonym="JW1587" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC74667.1" /db_xref="GI:1787879" /db_xref="ASAP:ABE-0005326" /db_xref="UniProtKB/Swiss-Prot:P77559" /db_xref="EcoGene:EG13850" /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS APFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEH AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWP KHHEQSPAARNFRIHLLNALR" gene 1539220..1540473 /gene="ynfM" /locus_tag="b1596" /gene_synonym="ECK1591" /gene_synonym="JW1588" /gene_synonym="yzyC" /db_xref="EcoGene:EG12951" CDS 1539220..1540473 /gene="ynfM" /locus_tag="b1596" /gene_synonym="ECK1591" /gene_synonym="JW1588" /gene_synonym="yzyC" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative arabinose efflux transporter" /protein_id="AAC74668.1" /db_xref="GI:1787880" /db_xref="ASAP:ABE-0005333" /db_xref="UniProtKB/Swiss-Prot:P43531" /db_xref="EcoGene:EG12951" /translation="MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA GLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKP VMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF SMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFALASALMFWKILPESRHFR PTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAV VGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGML LFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVFWHNYGWNG VGAFIALMLVIALLVGTRLHRRLHA" gene 1540897..1541205 /gene="asr" /locus_tag="b1597" /gene_synonym="ECK1592" /gene_synonym="JW5826" /db_xref="EcoGene:EG12149" CDS 1540897..1541205 /gene="asr" /locus_tag="b1597" /gene_synonym="ECK1592" /gene_synonym="JW5826" /function="phenotype; Not classified" /note="acid shock protein; GO_process: GO:0009268 - response to pH" /codon_start=1 /transl_table=11 /product="acid shock-inducible periplasmic protein" /protein_id="AAC74669.2" /db_xref="GI:87081945" /db_xref="ASAP:ABE-0005337" /db_xref="UniProtKB/Swiss-Prot:P36560" /db_xref="EcoGene:EG12149" /translation="MKKVLALVVAAAMGLSSAAFAAETTTTPAPTATTTKAAPAKTTH HKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQPAKPAAQPAA " gene 1541298..1541381 /gene="ydgU" /locus_tag="b4601" /gene_synonym="ECK4410" /db_xref="EcoGene:EG14462" CDS 1541298..1541381 /gene="ydgU" /locus_tag="b4601" /gene_synonym="ECK4410" /codon_start=1 /transl_table=11 /product="stationary phase-induced protein" /protein_id="ABP93446.1" /db_xref="GI:145693139" /db_xref="UniProtKB/Swiss-Prot:A5A617" /db_xref="EcoGene:EG14462" /translation="MVGRYRFEFILIILILCALITARFYLS" gene 1541481..1542302 /gene="ydgD" /locus_tag="b1598" /gene_synonym="ECK1593" /gene_synonym="JW1590" /db_xref="EcoGene:EG13925" CDS 1541481..1542302 /gene="ydgD" /locus_tag="b1598" /gene_synonym="ECK1593" /gene_synonym="JW1590" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC74670.1" /db_xref="GI:1787882" /db_xref="ASAP:ABE-0005340" /db_xref="UniProtKB/Swiss-Prot:P76176" /db_xref="EcoGene:EG13925" /translation="MRTTIAVVLGAISLTSAFVFADKPDVARSANDEVSTLFFGHDDR VPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRF VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP LPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT LPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK" gene complement(1542341..1542670) /gene="mdtI" /locus_tag="b1599" /gene_synonym="ECK1594" /gene_synonym="JW1591" /gene_synonym="ydgE" /db_xref="EcoGene:EG13926" CDS complement(1542341..1542670) /gene="mdtI" /locus_tag="b1599" /gene_synonym="ECK1594" /gene_synonym="JW1591" /gene_synonym="ydgE" /function="putative factor; Not classified" /note="possible chaperone" /codon_start=1 /transl_table=11 /product="multidrug efflux system transporter" /protein_id="AAC74671.1" /db_xref="GI:1787883" /db_xref="ASAP:ABE-0005343" /db_xref="UniProtKB/Swiss-Prot:P69210" /db_xref="EcoGene:EG13926" /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG MIMVKLA" gene complement(1542657..1543022) /gene="mdtJ" /locus_tag="b1600" /gene_synonym="ECK1595" /gene_synonym="JW1592" /gene_synonym="ydgF" /db_xref="EcoGene:EG13927" CDS complement(1542657..1543022) /gene="mdtJ" /locus_tag="b1600" /gene_synonym="ECK1595" /gene_synonym="JW1592" /gene_synonym="ydgF" /function="putative factor; Not classified" /note="possible chaperone; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="multidrug efflux system transporter" /protein_id="AAC74672.1" /db_xref="GI:1787884" /db_xref="ASAP:ABE-0005345" /db_xref="UniProtKB/Swiss-Prot:P69212" /db_xref="EcoGene:EG13927" /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI KSGTRKARKPELEVNHGAV" gene 1543434..1544468 /gene="tqsA" /locus_tag="b1601" /gene_synonym="ECK1596" /gene_synonym="JW1593" /gene_synonym="ydgG" /db_xref="EcoGene:EG13928" CDS 1543434..1544468 /gene="tqsA" /locus_tag="b1601" /gene_synonym="ECK1596" /gene_synonym="JW1593" /gene_synonym="ydgG" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="pheromone AI-2 transporter" /protein_id="AAC74673.1" /db_xref="GI:1787885" /db_xref="ASAP:ABE-0005350" /db_xref="UniProtKB/Swiss-Prot:P0AFS5" /db_xref="EcoGene:EG13928" /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI AVLLSDLNKE" gene complement(1544493..1545881) /gene="pntB" /locus_tag="b1602" /gene_synonym="ECK1597" /gene_synonym="JW1594" /db_xref="EcoGene:EG10745" CDS complement(1544493..1545881) /gene="pntB" /locus_tag="b1602" /gene_synonym="ECK1597" /gene_synonym="JW1594" /EC_number="1.6.1.2" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 3525165" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="pyridine nucleotide transhydrogenase, beta subunit" /protein_id="AAC74674.1" /db_xref="GI:1787886" /db_xref="ASAP:ABE-0005352" /db_xref="UniProtKB/Swiss-Prot:P0AB67" /db_xref="EcoGene:EG10745" /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND TVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD AKASVDAILKAL" gene complement(1545892..1547424) /gene="pntA" /locus_tag="b1603" /gene_synonym="ECK1598" /gene_synonym="JW1595" /db_xref="EcoGene:EG10744" CDS complement(1545892..1547424) /gene="pntA" /locus_tag="b1603" /gene_synonym="ECK1598" /gene_synonym="JW1595" /EC_number="1.6.1.2" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 3525165" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="pyridine nucleotide transhydrogenase, alpha subunit" /protein_id="AAC74675.1" /db_xref="GI:1787887" /db_xref="ASAP:ABE-0005354" /db_xref="UniProtKB/Swiss-Prot:P07001" /db_xref="EcoGene:EG10744" /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK AGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL LKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE EKCTCSPWRKYALMALAIILFGWMASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR KN" gene 1547948..1548892 /gene="ydgH" /locus_tag="b1604" /gene_synonym="ECK1599" /gene_synonym="JW1596" /db_xref="EcoGene:EG13929" CDS 1547948..1548892 /gene="ydgH" /locus_tag="b1604" /gene_synonym="ECK1599" /gene_synonym="JW1596" /codon_start=1 /transl_table=11 /product="DUF1471 family periplasmic protein" /protein_id="AAC74676.1" /db_xref="GI:1787889" /db_xref="ASAP:ABE-0005359" /db_xref="UniProtKB/Swiss-Prot:P76177" /db_xref="EcoGene:EG13929" /translation="MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTG RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK" gene 1549078..1550460 /gene="ydgI" /locus_tag="b1605" /gene_synonym="arcD" /gene_synonym="ECK1600" /gene_synonym="JW1597" /db_xref="EcoGene:EG13930" CDS 1549078..1550460 /gene="ydgI" /locus_tag="b1605" /gene_synonym="arcD" /gene_synonym="ECK1600" /gene_synonym="JW1597" /function="putative transport; Not classified" /note="putative arginine/ornithine antiporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative arginine/ornithine antiporter transporter" /protein_id="AAC74677.1" /db_xref="GI:1787890" /db_xref="ASAP:ABE-0005362" /db_xref="UniProtKB/Swiss-Prot:P0AAE5" /db_xref="EcoGene:EG13930" /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAV VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA SVPATWMLVG" gene 1550497..1551219 /gene="folM" /locus_tag="b1606" /gene_synonym="ECK1601" /gene_synonym="JW1598" /gene_synonym="ydgB" /db_xref="EcoGene:EG13189" CDS 1550497..1551219 /gene="folM" /locus_tag="b1606" /gene_synonym="ECK1601" /gene_synonym="JW1598" /gene_synonym="ydgB" /EC_number="1.5.1.3" /function="enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme" /protein_id="AAC74678.1" /db_xref="GI:1787891" /db_xref="ASAP:ABE-0005364" /db_xref="UniProtKB/Swiss-Prot:P0AFS3" /db_xref="EcoGene:EG13189" /translation="MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI DGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVL ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD YLLTSCFVTGRSFPLDGGRHLR" gene complement(1551216..1551551) /gene="ydgC" /locus_tag="b1607" /gene_synonym="ECK1602" /gene_synonym="JW1599" /db_xref="EcoGene:EG13191" CDS complement(1551216..1551551) /gene="ydgC" /locus_tag="b1607" /gene_synonym="ECK1602" /gene_synonym="JW1599" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="GlpM family inner membrane protein" /protein_id="AAC74679.1" /db_xref="GI:1787892" /db_xref="ASAP:ABE-0005366" /db_xref="UniProtKB/Swiss-Prot:P0ACX0" /db_xref="EcoGene:EG13191" /translation="MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHY IVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWV LIICWIKLH" gene 1551680..1552399 /gene="rstA" /locus_tag="b1608" /gene_synonym="ECK1603" /gene_synonym="JW1600" /gene_synonym="urpT" /db_xref="EcoGene:EG13190" CDS 1551680..1552399 /gene="rstA" /locus_tag="b1608" /gene_synonym="ECK1603" /gene_synonym="JW1600" /gene_synonym="urpT" /function="regulator; Not classified" /note="response transcriptional regulatory protein (RstB sensor); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator of RstAB two-component system" /protein_id="AAC74680.2" /db_xref="GI:145693140" /db_xref="ASAP:ABE-0005370" /db_xref="UniProtKB/Swiss-Prot:P52108" /db_xref="EcoGene:EG13190" /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE NPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT TPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAA EPYRIKTVRNKGYLFAPHAWE" gene 1552403..1553704 /gene="rstB" /locus_tag="b1609" /gene_synonym="ECK1604" /gene_synonym="JW1601" /gene_synonym="uspT" /db_xref="EcoGene:EG11233" CDS 1552403..1553704 /gene="rstB" /locus_tag="b1609" /gene_synonym="ECK1604" /gene_synonym="JW1601" /gene_synonym="uspT" /function="regulator; Global regulatory functions" /note="sensor histidine protein kinase (RstA regulator); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase of RstAB two-component system" /protein_id="AAC74681.1" /db_xref="GI:1787894" /db_xref="ASAP:ABE-0005372" /db_xref="UniProtKB/Swiss-Prot:P18392" /db_xref="EcoGene:EG11233" /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH WQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGVAFNQMADNINALIASKKQLIDG IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA" gene 1553780..1554709 /gene="tus" /locus_tag="b1610" /gene_synonym="ECK1605" /gene_synonym="JW1602" /gene_synonym="tau" /db_xref="EcoGene:EG11038" CDS 1553780..1554709 /gene="tus" /locus_tag="b1610" /gene_synonym="ECK1605" /gene_synonym="JW1602" /gene_synonym="tau" /function="factor; DNA - replication, repair, restriction/modification" /note="DNA-binding protein; inhibition of replication at Ter sites; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="inhibitor of replication at Ter, DNA-binding protein" /protein_id="AAC74682.1" /db_xref="GI:1787895" /db_xref="ASAP:ABE-0005378" /db_xref="UniProtKB/Swiss-Prot:P16525" /db_xref="EcoGene:EG11038" /translation="MARYDLVDRLNTTFRQMEQELAIFAAHLEQHKLLVARVFSLPEV KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLT VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD" gene complement(1554706..1556109) /gene="fumC" /locus_tag="b1611" /gene_synonym="ECK1606" /gene_synonym="JW1603" /db_xref="EcoGene:EG10358" CDS complement(1554706..1556109) /gene="fumC" /locus_tag="b1611" /gene_synonym="ECK1606" /gene_synonym="JW1603" /EC_number="4.2.1.2" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 1917897,8496960" /note="fumarase C= fumarate hydratase Class II; isozyme; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="fumarate hydratase (fumarase C),aerobic Class II" /protein_id="AAC74683.1" /db_xref="GI:1787896" /db_xref="ASAP:ABE-0005380" /db_xref="UniProtKB/Swiss-Prot:P05042" /db_xref="EcoGene:EG10358" /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL IPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF DSWVRPEQMVGSMKAGR" gene complement(1556252..1557898) /gene="fumA" /locus_tag="b1612" /gene_synonym="ECK1607" /gene_synonym="JW1604" /db_xref="EcoGene:EG10356" CDS complement(1556252..1557898) /gene="fumA" /locus_tag="b1612" /gene_synonym="ECK1607" /gene_synonym="JW1604" /EC_number="4.2.1.2" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="fumarase A = fumarate hydratase Class I; aerobic isozyme; GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="fumarate hydratase (fumarase A), aerobic Class I" /protein_id="AAC74684.1" /db_xref="GI:1787897" /db_xref="ASAP:ABE-0005392" /db_xref="UniProtKB/Swiss-Prot:P0AC33" /db_xref="EcoGene:EG10356" /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK" gene 1558097..1559272 /gene="manA" /locus_tag="b1613" /gene_synonym="ECK1608" /gene_synonym="JW1605" /gene_synonym="pmi" /db_xref="EcoGene:EG10566" CDS 1558097..1559272 /gene="manA" /locus_tag="b1613" /gene_synonym="ECK1608" /gene_synonym="JW1605" /gene_synonym="pmi" /EC_number="5.3.1.8" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase" /protein_id="AAC74685.1" /db_xref="GI:1787899" /db_xref="ASAP:ABE-0005398" /db_xref="UniProtKB/Swiss-Prot:P00946" /db_xref="EcoGene:EG10566" /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK HNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP VAGAHPAIAHFLQQPDAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL" gene 1559373..1560881 /gene="ydgA" /locus_tag="b1614" /gene_synonym="ECK1609" /gene_synonym="JW1606" /db_xref="EcoGene:EG12457" CDS 1559373..1560881 /gene="ydgA" /locus_tag="b1614" /gene_synonym="ECK1609" /gene_synonym="JW1606" /codon_start=1 /transl_table=11 /product="DUF945 family protein" /protein_id="AAC74686.1" /db_xref="GI:1787900" /db_xref="ASAP:ABE-0005402" /db_xref="UniProtKB/Swiss-Prot:P77804" /db_xref="EcoGene:EG12457" /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY QEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR LTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ" repeat_region 1560946..1561042 /note="RIP126 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1561107..1562372) /gene="uidC" /locus_tag="b1615" /gene_synonym="ECK1610" /gene_synonym="gusC" /gene_synonym="JW1607" /db_xref="EcoGene:EG12668" CDS complement(1561107..1562372) /gene="uidC" /locus_tag="b1615" /gene_synonym="ECK1610" /gene_synonym="gusC" /gene_synonym="JW1607" /function="membrane; Inner membrane" /note="membrane-associated protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane porin for beta-glucuronides porin protein" /protein_id="AAC74687.2" /db_xref="GI:87081946" /db_xref="ASAP:ABE-0005405" /db_xref="UniProtKB/Swiss-Prot:Q47706" /db_xref="EcoGene:EG12668" /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA DKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD KSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDT SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN YRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKG REKRDGSTLGDRLNYWDVKMSIQYDFMLK" gene complement(1562411..1563784) /gene="uidB" /locus_tag="b1616" /gene_synonym="ECK1611" /gene_synonym="gusB" /gene_synonym="JW1608" /gene_synonym="uidP" /db_xref="EcoGene:EG11658" CDS complement(1562411..1563784) /gene="uidB" /locus_tag="b1616" /gene_synonym="ECK1611" /gene_synonym="gusB" /gene_synonym="JW1608" /gene_synonym="uidP" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 15774881" /note="glucuronide permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucuronide transporter" /protein_id="AAC74688.1" /db_xref="GI:1787902" /db_xref="ASAP:ABE-0005407" /db_xref="UniProtKB/Swiss-Prot:P0CE44" /db_xref="EcoGene:EG11658" /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTD WSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLN ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVG TVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQ LISDITN" gene complement(1563781..1565592) /gene="uidA" /locus_tag="b1617" /gene_synonym="ECK1612" /gene_synonym="gurA" /gene_synonym="gusA" /gene_synonym="JW1609" /db_xref="EcoGene:EG11055" CDS complement(1563781..1565592) /gene="uidA" /locus_tag="b1617" /gene_synonym="ECK1612" /gene_synonym="gurA" /gene_synonym="gusA" /gene_synonym="JW1609" /EC_number="3.2.1.31" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 3105604,3534890" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="beta-D-glucuronidase" /protein_id="AAC74689.1" /db_xref="GI:1787903" /db_xref="ASAP:ABE-0005410" /db_xref="UniProtKB/Swiss-Prot:P05804" /db_xref="EcoGene:EG11055" /translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRA IAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY FHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRD ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV KGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAI KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN KKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ" gene complement(1565983..1566573) /gene="uidR" /locus_tag="b1618" /gene_synonym="ECK1613" /gene_synonym="gusR" /gene_synonym="JW1610" /db_xref="EcoGene:EG12667" CDS complement(1565983..1566573) /gene="uidR" /locus_tag="b1618" /gene_synonym="ECK1613" /gene_synonym="gusR" /gene_synonym="JW1610" /function="regulator; Degradation of small molecules: Carbon compounds" /note="repressor for uid operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor" /protein_id="AAC74690.1" /db_xref="GI:1787904" /db_xref="ASAP:ABE-0005415" /db_xref="UniProtKB/Swiss-Prot:P0ACT6" /db_xref="EcoGene:EG12667" /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLL DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS" gene complement(1566794..1567561) /gene="hdhA" /locus_tag="b1619" /gene_synonym="ECK1614" /gene_synonym="hsd" /gene_synonym="hsdH" /gene_synonym="JW1611" /db_xref="EcoGene:EG10425" CDS complement(1566794..1567561) /gene="hdhA" /locus_tag="b1619" /gene_synonym="ECK1614" /gene_synonym="hsd" /gene_synonym="hsdH" /gene_synonym="JW1611" /EC_number="1.1.1.159" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 2007545,9740056" /note="NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="7-alpha-hydroxysteroid dehydrogenase, NAD-dependent" /protein_id="AAC74691.1" /db_xref="GI:1787905" /db_xref="ASAP:ABE-0005419" /db_xref="UniProtKB/Swiss-Prot:P0AET8" /db_xref="EcoGene:EG10425" /translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN" gene complement(1567673..1568701) /gene="malI" /locus_tag="b1620" /gene_synonym="ECK1615" /gene_synonym="JW1612" /db_xref="EcoGene:EG10557" CDS complement(1567673..1568701) /gene="malI" /locus_tag="b1620" /gene_synonym="ECK1615" /gene_synonym="JW1612" /function="regulator; Degradation of small molecules: Carbon compounds" /note="maltose regulon regulatory protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor of Mal regulon" /protein_id="AAC74692.1" /db_xref="GI:1787906" /db_xref="ASAP:ABE-0005421" /db_xref="UniProtKB/Swiss-Prot:P18811" /db_xref="EcoGene:EG10557" /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGITLADRMMQKITHEETHSRNLII PARLIAAK" gene 1568876..1570468 /gene="malX" /locus_tag="b1621" /gene_synonym="ECK1616" /gene_synonym="JW1613" /db_xref="EcoGene:EG10563" CDS 1568876..1570468 /gene="malX" /locus_tag="b1621" /gene_synonym="ECK1616" /gene_synonym="JW1613" /EC_number="2.7.1.69" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, maltose and glucose-specific IIABC component; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="maltose and glucose-specific PTS enzyme IIB component and IIC component" /protein_id="AAC74693.1" /db_xref="GI:1787908" /db_xref="ASAP:ABE-0005429" /db_xref="UniProtKB/Swiss-Prot:P19642" /db_xref="EcoGene:EG10563" /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF IGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINS AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSC PTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVV GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG LSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGY NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV VIGPQVQSVKDEMAGLMHTVQA" gene 1570478..1571650 /gene="malY" /locus_tag="b1622" /gene_synonym="ECK1617" /gene_synonym="JW1614" /db_xref="EcoGene:EG10564" CDS 1570478..1571650 /gene="malY" /locus_tag="b1622" /gene_synonym="ECK1617" /gene_synonym="JW1614" /EC_number="4.4.1.8" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="cystathionine beta-lyase; maltose regulon modulator; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="PLP-dependent beta-cystathionase and maltose regulon regulator" /protein_id="AAC74694.1" /db_xref="GI:1787909" /db_xref="ASAP:ABE-0005432" /db_xref="UniProtKB/Swiss-Prot:P23256" /db_xref="EcoGene:EG10564" /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR" gene 1571754..1572755 /gene="add" /locus_tag="b1623" /gene_synonym="ECK1618" /gene_synonym="JW1615" /db_xref="EcoGene:EG10030" CDS 1571754..1572755 /gene="add" /locus_tag="b1623" /gene_synonym="ECK1618" /gene_synonym="JW1615" /EC_number="3.5.4.4" /function="enzyme; Salvage of nucleosides and nucleotides" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="AAC74695.1" /db_xref="GI:1787910" /db_xref="ASAP:ABE-0005435" /db_xref="UniProtKB/Swiss-Prot:P22333" /db_xref="EcoGene:EG10030" /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPG YMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR DQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASIN TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK" gene complement(1572789..1573829) /gene="ydgJ" /locus_tag="b1624" /gene_synonym="ECK1619" /gene_synonym="JW5265" /db_xref="EcoGene:EG13931" CDS complement(1572789..1573829) /gene="ydgJ" /locus_tag="b1624" /gene_synonym="ECK1619" /gene_synonym="JW5265" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74696.2" /db_xref="GI:87081947" /db_xref="ASAP:ABE-0005437" /db_xref="UniProtKB/Swiss-Prot:P77376" /db_xref="EcoGene:EG13931" /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVK ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI ESAKHRATLCLA" gene 1574072..1574197 /gene="blr" /locus_tag="b4409" /gene_synonym="ECK1620" /gene_synonym="JW5963" /db_xref="EcoGene:EG14389" CDS 1574072..1574197 /gene="blr" /locus_tag="b4409" /gene_synonym="ECK1620" /gene_synonym="JW5963" /note="beta-lactam resistance protein" /codon_start=1 /transl_table=11 /product="beta-lactam resistance membrane protein; divisome-associated protein" /protein_id="AAT48132.1" /db_xref="GI:48994886" /db_xref="ASAP:ABE-0047212" /db_xref="UniProtKB/Swiss-Prot:P56976" /db_xref="EcoGene:EG14389" /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK" gene 1574470..1574685 /gene="cnu" /locus_tag="b1625" /gene_synonym="ECK1621" /gene_synonym="JW1617" /gene_synonym="ydgT" /db_xref="EcoGene:EG14303" CDS 1574470..1574685 /gene="cnu" /locus_tag="b1625" /gene_synonym="ECK1621" /gene_synonym="JW1617" /gene_synonym="ydgT" /codon_start=1 /transl_table=11 /product="nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor" /protein_id="AAC74697.1" /db_xref="GI:1787912" /db_xref="ASAP:ABE-0005443" /db_xref="UniProtKB/Swiss-Prot:P64467" /db_xref="EcoGene:EG14303" /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD HRRAELVSGGRLFDLGQVPKSVWHYVQ" gene 1574771..1575211 /gene="ydgK" /locus_tag="b1626" /gene_synonym="ECK1622" /gene_synonym="JW1618" /gene_synonym="rsxP" /db_xref="EcoGene:EG13932" CDS 1574771..1575211 /gene="ydgK" /locus_tag="b1626" /gene_synonym="ECK1622" /gene_synonym="JW1618" /gene_synonym="rsxP" /codon_start=1 /transl_table=11 /product="DUF2569 family inner membrane protein" /protein_id="AAC74698.2" /db_xref="GI:87081948" /db_xref="ASAP:ABE-0005447" /db_xref="UniProtKB/Swiss-Prot:P76180" /db_xref="EcoGene:EG13932" /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF QTLGGQALTTQILWGVSFITAIALWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV KAFAFSPVEDGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP" gene 1575288..1575869 /gene="rsxA" /locus_tag="b1627" /gene_synonym="ECK1623" /gene_synonym="JW1619" /gene_synonym="rnfA" /gene_synonym="ydgL" /db_xref="EcoGene:EG13933" CDS 1575288..1575869 /gene="rsxA" /locus_tag="b1627" /gene_synonym="ECK1623" /gene_synonym="JW1619" /gene_synonym="rnfA" /gene_synonym="ydgL" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex" /protein_id="AAC74699.1" /db_xref="GI:1787914" /db_xref="ASAP:ABE-0005450" /db_xref="UniProtKB/Swiss-Prot:P0A766" /db_xref="EcoGene:EG13933" /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAV ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL" gene 1575869..1576447 /gene="rsxB" /locus_tag="b1628" /gene_synonym="ECK1624" /gene_synonym="JW1620" /gene_synonym="rnfB" /gene_synonym="ydgM" /db_xref="EcoGene:EG13934" CDS 1575869..1576447 /gene="rsxB" /locus_tag="b1628" /gene_synonym="ECK1624" /gene_synonym="JW1620" /gene_synonym="rnfB" /gene_synonym="ydgM" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein" /protein_id="AAC74700.1" /db_xref="GI:1787915" /db_xref="ASAP:ABE-0005452" /db_xref="UniProtKB/Swiss-Prot:P77223" /db_xref="EcoGene:EG13934" /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE ITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA" gene 1576440..1578662 /gene="rsxC" /locus_tag="b1629" /gene_synonym="ECK1625" /gene_synonym="JW1621" /gene_synonym="rnfC" /gene_synonym="ydgN" /db_xref="EcoGene:EG13935" CDS 1576440..1578662 /gene="rsxC" /locus_tag="b1629" /gene_synonym="ECK1625" /gene_synonym="JW1621" /gene_synonym="rnfC" /gene_synonym="ydgN" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex" /protein_id="AAC74701.1" /db_xref="GI:1787916" /db_xref="ASAP:ABE-0005454" /db_xref="UniProtKB/Swiss-Prot:P77611" /db_xref="EcoGene:EG13935" /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQM VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA KARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVE AAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKREQQPANAEPEEQVDP RKAAVEAAIARAKARKLEQQQANAVPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED " gene 1578663..1579721 /gene="rsxD" /locus_tag="b1630" /gene_synonym="ECK1626" /gene_synonym="JW1622" /gene_synonym="rnfD" /gene_synonym="ydgO" /db_xref="EcoGene:EG13936" CDS 1578663..1579721 /gene="rsxD" /locus_tag="b1630" /gene_synonym="ECK1626" /gene_synonym="JW1622" /gene_synonym="rnfD" /gene_synonym="ydgO" /note="electron transport complex protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex" /protein_id="AAC74702.1" /db_xref="GI:1787917" /db_xref="ASAP:ABE-0005457" /db_xref="UniProtKB/Swiss-Prot:P76182" /db_xref="EcoGene:EG13936" /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL VQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA GWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLS GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT VPLIDYYTRPRVYGHRKG" gene 1579725..1580345 /gene="rsxG" /locus_tag="b1631" /gene_synonym="ECK1627" /gene_synonym="JW1623" /gene_synonym="rnfG" /gene_synonym="ydgP" /db_xref="EcoGene:EG13937" CDS 1579725..1580345 /gene="rsxG" /locus_tag="b1631" /gene_synonym="ECK1627" /gene_synonym="JW1623" /gene_synonym="rnfG" /gene_synonym="ydgP" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex" /protein_id="AAC74703.1" /db_xref="GI:1787918" /db_xref="ASAP:ABE-0005459" /db_xref="UniProtKB/Swiss-Prot:P77285" /db_xref="EcoGene:EG13937" /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE" gene 1580349..1581044 /gene="rsxE" /locus_tag="b1632" /gene_synonym="ECK1628" /gene_synonym="JW1624" /gene_synonym="rnfE" /gene_synonym="ydgQ" /db_xref="EcoGene:EG13938" CDS 1580349..1581044 /gene="rsxE" /locus_tag="b1632" /gene_synonym="ECK1628" /gene_synonym="JW1624" /gene_synonym="rnfE" /gene_synonym="ydgQ" /note="electron transport complex protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase" /protein_id="AAC74704.1" /db_xref="GI:1787919" /db_xref="ASAP:ABE-0005461" /db_xref="UniProtKB/Swiss-Prot:P77179" /db_xref="EcoGene:EG13938" /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA AERALPNGETGNV" gene 1581044..1581679 /gene="nth" /locus_tag="b1633" /gene_synonym="ECK1629" /gene_synonym="JW1625" /db_xref="EcoGene:EG10662" CDS 1581044..1581679 /gene="nth" /locus_tag="b1633" /gene_synonym="ECK1629" /gene_synonym="JW1625" /EC_number="4.2.99.18" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 2669955" /note="endonuclease III; specific for apurinic and/or apyrimidinic sites; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0009314 - response to radiation" /codon_start=1 /transl_table=11 /product="DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)" /protein_id="AAC74705.1" /db_xref="GI:1787920" /db_xref="ASAP:ABE-0005463" /db_xref="UniProtKB/Swiss-Prot:P0AB83" /db_xref="EcoGene:EG10662" /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI" gene 1582290..1583792 /gene="dtpA" /locus_tag="b1634" /gene_synonym="ECK1630" /gene_synonym="JW1626" /gene_synonym="tppB" /gene_synonym="ydgR" /db_xref="EcoGene:EG13939" CDS 1582290..1583792 /gene="dtpA" /locus_tag="b1634" /gene_synonym="ECK1630" /gene_synonym="JW1626" /gene_synonym="tppB" /gene_synonym="ydgR" /function="transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="dipeptide and tripeptide permease A" /protein_id="AAC74706.1" /db_xref="GI:1787922" /db_xref="ASAP:ABE-0005469" /db_xref="UniProtKB/Swiss-Prot:P77304" /db_xref="EcoGene:EG13939" /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP LMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQDDAADKAAKAAVA" gene 1583898..1584503 /gene="gstA" /locus_tag="b1635" /gene_synonym="ECK1631" /gene_synonym="gst" /gene_synonym="JW1627" /db_xref="EcoGene:EG12613" CDS 1583898..1584503 /gene="gstA" /locus_tag="b1635" /gene_synonym="ECK1631" /gene_synonym="gst" /gene_synonym="JW1627" /EC_number="2.5.1.18" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 2185038,7798255" /codon_start=1 /transl_table=11 /product="glutathionine S-transferase" /protein_id="AAC74707.1" /db_xref="GI:1787923" /db_xref="ASAP:ABE-0005473" /db_xref="UniProtKB/Swiss-Prot:P0A9D2" /db_xref="EcoGene:EG12613" /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFT VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK" gene complement(1584547..1585410) /gene="pdxY" /locus_tag="b1636" /gene_synonym="ECK1632" /gene_synonym="JW1628" /gene_synonym="ydgS" /db_xref="EcoGene:EG13940" CDS complement(1584547..1585410) /gene="pdxY" /locus_tag="b1636" /gene_synonym="ECK1632" /gene_synonym="JW1628" /gene_synonym="ydgS" /EC_number="2.7.1.35" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="pyridoxal kinase 2 / pyridoxine kinase" /codon_start=1 /transl_table=11 /product="pyridoxamine kinase" /protein_id="AAC74708.1" /db_xref="GI:1787924" /db_xref="ASAP:ABE-0005475" /db_xref="UniProtKB/Swiss-Prot:P77150" /db_xref="EcoGene:EG13940" /translation="MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNH TQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKA ANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNN VEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQ PVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIA KPEHYFSATKL" gene complement(1585469..1586743) /gene="tyrS" /locus_tag="b1637" /gene_synonym="ECK1633" /gene_synonym="JW1629" /db_xref="EcoGene:EG11043" CDS complement(1585469..1586743) /gene="tyrS" /locus_tag="b1637" /gene_synonym="ECK1633" /gene_synonym="JW1629" /EC_number="6.1.1.1" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="tyrosine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="AAC74709.1" /db_xref="GI:1787925" /db_xref="ASAP:ABE-0005477" /db_xref="UniProtKB/Swiss-Prot:P0AGJ9" /db_xref="EcoGene:EG11043" /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK" gene complement(1586872..1587528) /gene="pdxH" /locus_tag="b1638" /gene_synonym="ECK1634" /gene_synonym="JW1630" /db_xref="EcoGene:EG11487" CDS complement(1586872..1587528) /gene="pdxH" /locus_tag="b1638" /gene_synonym="ECK1634" /gene_synonym="JW1630" /EC_number="1.4.3.5" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="pyridoxinephosphate oxidase; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="pyridoxine 5'-phosphate oxidase" /protein_id="AAC74710.1" /db_xref="GI:1787926" /db_xref="ASAP:ABE-0005482" /db_xref="UniProtKB/Swiss-Prot:P0AFI7" /db_xref="EcoGene:EG11487" /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE AKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP " gene complement(1587587..1587916) /gene="mliC" /locus_tag="b1639" /gene_synonym="ECK1635" /gene_synonym="JW1631" /gene_synonym="ydhA" /db_xref="EcoGene:EG11488" CDS complement(1587587..1587916) /gene="mliC" /locus_tag="b1639" /gene_synonym="ECK1635" /gene_synonym="JW1631" /gene_synonym="ydhA" /codon_start=1 /transl_table=11 /product="inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein" /protein_id="AAC74711.2" /db_xref="GI:87081949" /db_xref="ASAP:ABE-0005485" /db_xref="UniProtKB/Swiss-Prot:P28224" /db_xref="EcoGene:EG11488" /translation="MTMKKLLIIILPVLLSGCSAFNQLVERMQTDTLEYQCDEKPLTV KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC QLQNPQR" gene complement(1588014..1589123) /gene="anmK" /locus_tag="b1640" /gene_synonym="ECK1636" /gene_synonym="JW1632" /gene_synonym="ydhH" /db_xref="EcoGene:EG13942" CDS complement(1588014..1589123) /gene="anmK" /locus_tag="b1640" /gene_synonym="ECK1636" /gene_synonym="JW1632" /gene_synonym="ydhH" /function="enzyme; Murein recycling" /codon_start=1 /transl_table=11 /product="anhydro-N-acetylmuramic acid kinase" /protein_id="AAC74712.1" /db_xref="GI:1787928" /db_xref="ASAP:ABE-0005488" /db_xref="UniProtKB/Swiss-Prot:P77570" /db_xref="EcoGene:EG13942" /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL KQAVLDICQGQQLTLSQFGQLDTQLGQLFADAVNALLKEQNLQARDIVAIGCHGQTVW HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP" gene 1589397..1589864 /gene="slyB" /locus_tag="b1641" /gene_synonym="ECK1637" /gene_synonym="JW1633" /db_xref="EcoGene:EG13409" CDS 1589397..1589864 /gene="slyB" /locus_tag="b1641" /gene_synonym="ECK1637" /gene_synonym="JW1633" /function="putative membrane; Not classified" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="AAT48133.1" /db_xref="GI:48994887" /db_xref="ASAP:ABE-0005493" /db_xref="UniProtKB/Swiss-Prot:P0A905" /db_xref="EcoGene:EG13409" /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR" gene complement(1589911..1590345) /gene="slyA" /locus_tag="b1642" /gene_synonym="ECK1638" /gene_synonym="JW5267" /db_xref="EcoGene:EG13408" CDS complement(1589911..1590345) /gene="slyA" /locus_tag="b1642" /gene_synonym="ECK1638" /gene_synonym="JW5267" /function="regulator; Adaptations, atypical conditions" /note="transcriptional regulator for cryptic hemolysin; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="global transcriptional regulator" /protein_id="AAC74714.2" /db_xref="GI:87081950" /db_xref="ASAP:ABE-0005495" /db_xref="UniProtKB/Swiss-Prot:P0A8W2" /db_xref="EcoGene:EG13408" /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG" gene 1590546..1590782 /gene="ydhI" /locus_tag="b1643" /gene_synonym="ECK1639" /gene_synonym="JW1635" /db_xref="EcoGene:EG13943" CDS 1590546..1590782 /gene="ydhI" /locus_tag="b1643" /gene_synonym="ECK1639" /gene_synonym="JW1635" /codon_start=1 /transl_table=11 /product="DUF1656 family putative inner membrane efflux pump associated protein" /protein_id="AAC74715.1" /db_xref="GI:1787931" /db_xref="ASAP:ABE-0005499" /db_xref="UniProtKB/Swiss-Prot:P64471" /db_xref="EcoGene:EG13943" /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL RGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW" gene 1590785..1591642 /gene="ydhJ" /locus_tag="b1644" /gene_synonym="ECK1640" /gene_synonym="JW1636" /db_xref="EcoGene:EG13944" CDS 1590785..1591642 /gene="ydhJ" /locus_tag="b1644" /gene_synonym="ECK1640" /gene_synonym="JW1636" /function="putative membrane; Not classified" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative membrane fusion protein (MFP) of YdhJK efflux pump" /protein_id="AAC74716.2" /db_xref="GI:87081951" /db_xref="ASAP:ABE-0005501" /db_xref="UniProtKB/Swiss-Prot:P76185" /db_xref="EcoGene:EG13944" /translation="MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQ VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN NEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSG WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT LQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG TTCSIAVGQ" gene 1591642..1593654 /gene="ydhK" /locus_tag="b1645" /gene_synonym="ECK1641" /gene_synonym="JW1637" /db_xref="EcoGene:EG13945" CDS 1591642..1593654 /gene="ydhK" /locus_tag="b1645" /gene_synonym="ECK1641" /gene_synonym="JW1637" /codon_start=1 /transl_table=11 /product="putative efflux protein (PET) component of YdhJK efflux pump" /protein_id="AAC74717.1" /db_xref="GI:1787933" /db_xref="ASAP:ABE-0005503" /db_xref="UniProtKB/Swiss-Prot:P76186" /db_xref="EcoGene:EG13945" /translation="MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLD EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSA WLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGI LCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQIL TMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREIL EQLLTALASSQTDVYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRL QSGVDDHTRLPRTSGLARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLA AISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLAT MQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFA ILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARR WLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATL EELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS" gene complement(1593655..1594176) /gene="sodC" /locus_tag="b1646" /gene_synonym="ECK1642" /gene_synonym="JW1638" /db_xref="EcoGene:EG13419" CDS complement(1593655..1594176) /gene="sodC" /locus_tag="b1646" /gene_synonym="ECK1642" /gene_synonym="JW1638" /EC_number="1.15.1.1" /function="enzyme; Detoxification" /note="superoxide dismutase precursor (Cu-Zn); GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="superoxide dismutase, Cu, Zn, periplasmic" /protein_id="AAC74718.1" /db_xref="GI:1787934" /db_xref="ASAP:ABE-0005505" /db_xref="UniProtKB/Swiss-Prot:P0AGD1" /db_xref="EcoGene:EG13419" /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE GPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPL GGGGERYACGVIK" gene complement(1594257..1595153) /gene="ydhF" /locus_tag="b1647" /gene_synonym="ECK1643" /gene_synonym="JW1639" /db_xref="EcoGene:EG13420" CDS complement(1594257..1595153) /gene="ydhF" /locus_tag="b1647" /gene_synonym="ECK1643" /gene_synonym="JW1639" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAT48134.1" /db_xref="GI:48994888" /db_xref="ASAP:ABE-0005508" /db_xref="UniProtKB/Swiss-Prot:P76187" /db_xref="EcoGene:EG13420" /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE TLKMTRQQWFRIRKAALGYDVP" gene complement(1595202..1595441) /gene="ydhL" /locus_tag="b1648" /gene_synonym="ECK1644" /gene_synonym="JW5827" /db_xref="EcoGene:EG13946" CDS complement(1595202..1595441) /gene="ydhL" /locus_tag="b1648" /gene_synonym="ECK1644" /gene_synonym="JW5827" /codon_start=1 /transl_table=11 /product="DUF1289 family protein" /protein_id="AAC74720.2" /db_xref="GI:87081952" /db_xref="ASAP:ABE-0005510" /db_xref="UniProtKB/Swiss-Prot:P64474" /db_xref="EcoGene:EG13946" /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF" gene 1595544..1596143 /gene="nemR" /locus_tag="b1649" /gene_synonym="ECK1645" /gene_synonym="JW5874" /gene_synonym="ydhM" /db_xref="EcoGene:EG13947" CDS 1595544..1596143 /gene="nemR" /locus_tag="b1649" /gene_synonym="ECK1645" /gene_synonym="JW5874" /gene_synonym="ydhM" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated" /protein_id="AAC74721.3" /db_xref="GI:145693141" /db_xref="ASAP:ABE-0005514" /db_xref="UniProtKB/Swiss-Prot:P67430" /db_xref="EcoGene:EG13947" /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS FYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV" gene 1596180..1597277 /gene="nemA" /locus_tag="b1650" /gene_synonym="ECK1646" /gene_synonym="JW1642" /gene_synonym="ydhN" /db_xref="EcoGene:EG13546" CDS 1596180..1597277 /gene="nemA" /locus_tag="b1650" /gene_synonym="ECK1646" /gene_synonym="JW1642" /gene_synonym="ydhN" /EC_number="1.-.-.-" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="N-ethylmaleimide reductase; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme" /protein_id="AAC74722.1" /db_xref="GI:1787939" /db_xref="ASAP:ABE-0005516" /db_xref="UniProtKB/Swiss-Prot:P77258" /db_xref="EcoGene:EG13546" /translation="MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAE YYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQL WHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGI VNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEV VDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDW AGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLV ARLQRKAELNPQRAESFYGGGAEGYTDYPTL" gene 1597358..1597765 /gene="gloA" /locus_tag="b1651" /gene_synonym="ECK1647" /gene_synonym="JW1643" /db_xref="EcoGene:EG13421" CDS 1597358..1597765 /gene="gloA" /locus_tag="b1651" /gene_synonym="ECK1647" /gene_synonym="JW1643" /EC_number="4.4.1.5" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 9628737" /note="lactoylglutathione lyase; GO_process: GO:0009438 - methylglyoxal metabolic process" /codon_start=1 /transl_table=11 /product="glyoxalase I, Ni-dependent" /protein_id="AAC74723.1" /db_xref="GI:1787940" /db_xref="ASAP:ABE-0005520" /db_xref="UniProtKB/Swiss-Prot:P0AC81" /db_xref="EcoGene:EG13421" /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP VKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN" gene 1597868..1598515 /gene="rnt" /locus_tag="b1652" /gene_synonym="ECK1648" /gene_synonym="JW1644" /db_xref="EcoGene:EG11547" CDS 1597868..1598515 /gene="rnt" /locus_tag="b1652" /gene_synonym="ECK1648" /gene_synonym="JW1644" /EC_number="3.1.13.-" /function="enzyme; Degradation of RNA" /note="RNase T, degrades tRNA; GO_process: GO:0006401 - RNA catabolic process; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair" /protein_id="AAC74724.1" /db_xref="GI:1787941" /db_xref="ASAP:ABE-0005523" /db_xref="UniProtKB/Swiss-Prot:P30014" /db_xref="EcoGene:EG11547" /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV VRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLSAAEEV" gene 1598608..1603224 /gene="lhr" /locus_tag="b1653" /gene_synonym="ECK1649" /gene_synonym="JW1645" /gene_synonym="rhlF" /db_xref="EcoGene:EG11548" CDS 1598608..1603224 /gene="lhr" /locus_tag="b1653" /gene_synonym="ECK1649" /gene_synonym="JW1645" /gene_synonym="rhlF" /function="enzyme; DNA - replication, repair, restriction/modification" /note="member of ATP-dependent helicase superfamily II; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase" /protein_id="AAC74725.1" /db_xref="GI:1787942" /db_xref="ASAP:ABE-0005525" /db_xref="UniProtKB/Swiss-Prot:P30015" /db_xref="EcoGene:EG11548" /translation="MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL MLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVR SASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGS IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG NGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS RHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVA RIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR TPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLE NLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLR YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRS LQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQL AGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEY AAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSME DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNL LPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTT ALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG" repeat_region 1603235..1603258 /note="REP127 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1603275..1603622) /gene="grxD" /locus_tag="b1654" /gene_synonym="ECK1650" /gene_synonym="JW1646" /gene_synonym="ydhD" /db_xref="EcoGene:EG12181" CDS complement(1603275..1603622) /gene="grxD" /locus_tag="b1654" /gene_synonym="ECK1650" /gene_synonym="JW1646" /gene_synonym="ydhD" /codon_start=1 /transl_table=11 /product="glutaredoxin-4" /protein_id="AAC74726.1" /db_xref="GI:1787943" /db_xref="ASAP:ABE-0005527" /db_xref="UniProtKB/Swiss-Prot:P0AC69" /db_xref="EcoGene:EG12181" /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE TAAKYKSEEPDAE" gene 1603956..1604771 /gene="mepH" /locus_tag="b1655" /gene_synonym="ECK1651" /gene_synonym="JW5270" /gene_synonym="ydhO" /db_xref="EcoGene:EG13949" CDS 1603956..1604771 /gene="mepH" /locus_tag="b1655" /gene_synonym="ECK1651" /gene_synonym="JW5270" /gene_synonym="ydhO" /function="enzyme; Murein sacculus, peptidoglycan" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="murein DD-endopeptidase, space-maker hydrolase" /protein_id="AAC74727.1" /db_xref="GI:1787944" /db_xref="ASAP:ABE-0005533" /db_xref="UniProtKB/Swiss-Prot:P76190" /db_xref="EcoGene:EG13949" /translation="MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR" gene 1604899..1605480 /gene="sodB" /locus_tag="b1656" /gene_synonym="ECK1652" /gene_synonym="JW1648" /db_xref="EcoGene:EG10954" CDS 1604899..1605480 /gene="sodB" /locus_tag="b1656" /gene_synonym="ECK1652" /gene_synonym="JW1648" /EC_number="1.15.1.1" /function="enzyme; Detoxification" /note="superoxide dismutase, iron; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="superoxide dismutase, Fe" /protein_id="AAC74728.1" /db_xref="GI:1787946" /db_xref="ASAP:ABE-0005537" /db_xref="UniProtKB/Swiss-Prot:P0AGD3" /db_xref="EcoGene:EG10954" /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA" repeat_region 1605504..1605577 /note="REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1605642..1606811) /gene="ydhP" /locus_tag="b1657" /gene_synonym="ECK1653" /gene_synonym="JW1649" /db_xref="EcoGene:EG13950" CDS complement(1605642..1606811) /gene="ydhP" /locus_tag="b1657" /gene_synonym="ECK1653" /gene_synonym="JW1649" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS transporter, inner membrane protein" /protein_id="AAC74729.1" /db_xref="GI:1787947" /db_xref="ASAP:ABE-0005540" /db_xref="UniProtKB/Swiss-Prot:P77389" /db_xref="EcoGene:EG13950" /translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL TSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM SFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF TLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLL MVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAF NLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS" gene complement(1606977..1607066) /gene="ynhF" /locus_tag="b4602" /gene_synonym="ECK4411" /db_xref="EcoGene:EG14016" CDS complement(1606977..1607066) /gene="ynhF" /locus_tag="b4602" /gene_synonym="ECK4411" /codon_start=1 /transl_table=11 /product="stress response membrane" /protein_id="ABP93447.1" /db_xref="GI:145693142" /db_xref="UniProtKB/Swiss-Prot:A5A618" /db_xref="EcoGene:EG14016" /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH" gene 1607365..1608390 /gene="purR" /locus_tag="b1658" /gene_synonym="ECK1654" /gene_synonym="JW1650" /db_xref="EcoGene:EG10800" CDS 1607365..1608390 /gene="purR" /locus_tag="b1658" /gene_synonym="ECK1654" /gene_synonym="JW1650" /function="regulator; Purine ribonucleotide biosynthesis" /note="transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006164 - purine nucleotide biosynthetic process; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0000105 - histidine biosynthetic process; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006545 - glycine biosynthetic process; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006221 - pyrimidine nucleotide biosynthetic process; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor, hypoxanthine-binding" /protein_id="AAC74730.1" /db_xref="GI:1787948" /db_xref="ASAP:ABE-0005545" /db_xref="UniProtKB/Swiss-Prot:P0ACP7" /db_xref="EcoGene:EG10800" /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG PFRDYRR" gene complement(1608387..1609319) /gene="ydhB" /locus_tag="b1659" /gene_synonym="ECK1655" /gene_synonym="JW1651" /db_xref="EcoGene:EG12140" CDS complement(1608387..1609319) /gene="ydhB" /locus_tag="b1659" /gene_synonym="ECK1655" /gene_synonym="JW1651" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC74731.1" /db_xref="GI:1787949" /db_xref="ASAP:ABE-0005547" /db_xref="UniProtKB/Swiss-Prot:P0ACR2" /db_xref="EcoGene:EG12140" /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND MSPALTWLLEYLGDSETLNKEWLREPEETPATGD" gene 1609432..1610643 /gene="ydhC" /locus_tag="b1660" /gene_synonym="ECK1656" /gene_synonym="JW1652" /db_xref="EcoGene:EG12141" CDS 1609432..1610643 /gene="ydhC" /locus_tag="b1660" /gene_synonym="ECK1656" /gene_synonym="JW1652" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative arabinose efflux transporter" /protein_id="AAT48135.1" /db_xref="GI:48994889" /db_xref="ASAP:ABE-0005551" /db_xref="UniProtKB/Swiss-Prot:P37597" /db_xref="EcoGene:EG12141" /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF VQAVGVCAAAVIWQALVTDYYPSQKVNRIFAAIMPLVGLSPALAPLLGSWLLVHFSWQ AIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNH GNAEVAHSESH" gene 1610934..1612082 /gene="cfa" /locus_tag="b1661" /gene_synonym="cdfA" /gene_synonym="ECK1657" /gene_synonym="JW1653" /db_xref="EcoGene:EG11531" CDS 1610934..1612082 /gene="cfa" /locus_tag="b1661" /gene_synonym="cdfA" /gene_synonym="ECK1657" /gene_synonym="JW1653" /EC_number="2.1.1.79" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="cyclopropane fatty acyl phospholipid synthase" /codon_start=1 /transl_table=11 /product="cyclopropane fatty acyl phospholipid synthase, SAM-dependent" /protein_id="AAC74733.1" /db_xref="GI:1787951" /db_xref="ASAP:ABE-0005555" /db_xref="UniProtKB/Swiss-Prot:P0A9H7" /db_xref="EcoGene:EG11531" /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTIL LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR" gene complement(1612122..1612763) /gene="ribC" /locus_tag="b1662" /gene_synonym="ECK1658" /gene_synonym="JW1654" /gene_synonym="ribE" /db_xref="EcoGene:EG11406" CDS complement(1612122..1612763) /gene="ribC" /locus_tag="b1662" /gene_synonym="ECK1658" /gene_synonym="JW1654" /gene_synonym="ribE" /EC_number="2.5.1.9" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /note="riboflavin synthase, alpha chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase, alpha subunit" /protein_id="AAC74734.1" /db_xref="GI:1787952" /db_xref="ASAP:ABE-0005557" /db_xref="UniProtKB/Swiss-Prot:P0AFU8" /db_xref="EcoGene:EG11406" /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA" gene 1612978..1614351 /gene="mdtK" /locus_tag="b1663" /gene_synonym="ECK1659" /gene_synonym="JW1655" /gene_synonym="norE" /gene_synonym="norM" /gene_synonym="ydhE" /db_xref="EcoGene:EG12400" CDS 1612978..1614351 /gene="mdtK" /locus_tag="b1663" /gene_synonym="ECK1659" /gene_synonym="JW1655" /gene_synonym="norE" /gene_synonym="norM" /gene_synonym="ydhE" /function="putative transport; Not classified" /note="multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system transporter" /protein_id="AAT48136.1" /db_xref="GI:48994890" /db_xref="ASAP:ABE-0005561" /db_xref="UniProtKB/Swiss-Prot:P37340" /db_xref="EcoGene:EG12400" /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAI ILQRASR" gene complement(1614392..1615648) /gene="ydhQ" /locus_tag="b1664" /gene_synonym="ECK1660" /gene_synonym="JW1656" /db_xref="EcoGene:EG13951" CDS complement(1614392..1615648) /gene="ydhQ" /locus_tag="b1664" /gene_synonym="ECK1660" /gene_synonym="JW1656" /function="putative enzyme; Not classified" /note="possible enzyme" /codon_start=1 /transl_table=11 /product="autotransporter adhesin-related protein" /protein_id="AAC74736.1" /db_xref="GI:1787954" /db_xref="ASAP:ABE-0005563" /db_xref="UniProtKB/Swiss-Prot:P77552" /db_xref="EcoGene:EG13951" /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH PEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA PVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINL NGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD ASRQTLCNALKLQPDEDGIGATLQPA" gene 1615956..1616032 /gene="valV" /locus_tag="b1665" /gene_synonym="ECK1661" /gene_synonym="JWR0031" /db_xref="EcoGene:EG30111" tRNA 1615956..1616032 /gene="valV" /locus_tag="b1665" /gene_synonym="ECK1661" /gene_synonym="JWR0031" /product="tRNA-Val" /note="anticodon: GAC" /db_xref="ASAP:ABE-0005567" /db_xref="EcoGene:EG30111" gene 1616037..1616113 /gene="valW" /locus_tag="b1666" /gene_synonym="ECK1662" /gene_synonym="JWR0032" /db_xref="EcoGene:EG30112" tRNA 1616037..1616113 /gene="valW" /locus_tag="b1666" /gene_synonym="ECK1662" /gene_synonym="JWR0032" /product="tRNA-Val" /note="anticodon: GAC" /db_xref="ASAP:ABE-0005569" /db_xref="EcoGene:EG30112" gene 1616221..1616526 /gene="ydhR" /locus_tag="b1667" /gene_synonym="ECK1663" /gene_synonym="JW1657" /db_xref="EcoGene:EG13952" CDS 1616221..1616526 /gene="ydhR" /locus_tag="b1667" /gene_synonym="ECK1663" /gene_synonym="JW1657" /codon_start=1 /transl_table=11 /product="putative monooxygenase" /protein_id="AAC74737.1" /db_xref="GI:1787956" /db_xref="ASAP:ABE-0005572" /db_xref="UniProtKB/Swiss-Prot:P0ACX3" /db_xref="EcoGene:EG13952" /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA" gene 1616652..1618256 /gene="ydhS" /locus_tag="b1668" /gene_synonym="ECK1664" /gene_synonym="JW1658" /db_xref="EcoGene:EG13953" CDS 1616652..1618256 /gene="ydhS" /locus_tag="b1668" /gene_synonym="ECK1664" /gene_synonym="JW1658" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74738.1" /db_xref="GI:1787957" /db_xref="ASAP:ABE-0005575" /db_xref="UniProtKB/Swiss-Prot:P77148" /db_xref="EcoGene:EG13953" /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY SDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSHLQRYGVKKETLHDRQFLPRILL GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFI EDDKQHVVFHRDNASEKLNITLLSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKG EEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNL QEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPS ESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKV KDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTA CAEIGEAMARAVVKPASRARRRLSFD" gene complement(1618268..1619080) /gene="ydhT" /locus_tag="b1669" /gene_synonym="ECK1665" /gene_synonym="JW1659" /db_xref="EcoGene:EG13954" CDS complement(1618268..1619080) /gene="ydhT" /locus_tag="b1669" /gene_synonym="ECK1665" /gene_synonym="JW1659" /codon_start=1 /transl_table=11 /product="FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex" /protein_id="AAC74739.1" /db_xref="GI:1787958" /db_xref="ASAP:ABE-0005577" /db_xref="UniProtKB/Swiss-Prot:P77147" /db_xref="EcoGene:EG13954" /translation="MIITQADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYT DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCED NARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG VVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC" gene complement(1619084..1619869) /gene="ydhU" /locus_tag="b1670" /gene_synonym="ECK1666" /gene_synonym="JW1660" /db_xref="EcoGene:EG13955" CDS complement(1619084..1619869) /gene="ydhU" /locus_tag="b1670" /gene_synonym="ECK1666" /gene_synonym="JW1660" /function="putative enzyme; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex" /protein_id="AAC74740.1" /db_xref="GI:1787959" /db_xref="ASAP:ABE-0005579" /db_xref="UniProtKB/Swiss-Prot:P77409" /db_xref="EcoGene:EG13955" /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL GLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGAT AVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGI MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW LLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH" gene complement(1619866..1620534) /gene="ydhX" /locus_tag="b1671" /gene_synonym="ECK1667" /gene_synonym="JW5271" /db_xref="EcoGene:EG13958" CDS complement(1619866..1620534) /gene="ydhX" /locus_tag="b1671" /gene_synonym="ECK1667" /gene_synonym="JW5271" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex" /protein_id="AAC74741.4" /db_xref="GI:226510944" /db_xref="ASAP:ABE-0005583" /db_xref="UniProtKB/Swiss-Prot:P77375" /db_xref="EcoGene:EG13958" /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID VCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA KGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIK KENV" gene complement(1620598..1621245) /gene="ydhW" /locus_tag="b1672" /gene_synonym="ECK1668" /gene_synonym="JW1662" /db_xref="EcoGene:EG13957" CDS complement(1620598..1621245) /gene="ydhW" /locus_tag="b1672" /gene_synonym="ECK1668" /gene_synonym="JW1662" /codon_start=1 /transl_table=11 /product="FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex" /protein_id="AAC74742.1" /db_xref="GI:1787961" /db_xref="ASAP:ABE-0005585" /db_xref="UniProtKB/Swiss-Prot:P77564" /db_xref="EcoGene:EG13957" /translation="MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEI LAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDY YYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQ IEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP" gene complement(1621249..1623351) /gene="ydhV" /locus_tag="b1673" /gene_synonym="ECK1669" /gene_synonym="JW5272" /db_xref="EcoGene:EG13956" CDS complement(1621249..1623351) /gene="ydhV" /locus_tag="b1673" /gene_synonym="ECK1669" /gene_synonym="JW5272" /codon_start=1 /transl_table=11 /product="putative oxidoreductase subunit" /protein_id="AAC74743.1" /db_xref="GI:1787962" /db_xref="ASAP:ABE-0005587" /db_xref="UniProtKB/Swiss-Prot:P76192" /db_xref="EcoGene:EG13956" /translation="MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDE VPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQ MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR LNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS KGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN EHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQR LGLEDIAADLAAHNLLPA" gene complement(1623372..1623998) /gene="ydhY" /locus_tag="b1674" /gene_synonym="ECK1670" /gene_synonym="JW1664" /db_xref="EcoGene:EG13959" CDS complement(1623372..1623998) /gene="ydhY" /locus_tag="b1674" /gene_synonym="ECK1670" /gene_synonym="JW1664" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex" /protein_id="AAC74744.1" /db_xref="GI:1787963" /db_xref="ASAP:ABE-0005589" /db_xref="UniProtKB/Swiss-Prot:P0AAL6" /db_xref="EcoGene:EG13959" /translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE DIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV" gene complement(1624453..1624662) /gene="ydhZ" /locus_tag="b1675" /gene_synonym="ECK1671" /gene_synonym="JW1665" /db_xref="EcoGene:EG13960" CDS complement(1624453..1624662) /gene="ydhZ" /locus_tag="b1675" /gene_synonym="ECK1671" /gene_synonym="JW1665" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74745.1" /db_xref="GI:1787964" /db_xref="ASAP:ABE-0005591" /db_xref="UniProtKB/Swiss-Prot:P0ACX5" /db_xref="EcoGene:EG13960" /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA LANKRIQRSELEKQAMETVINALVK" gene 1625219..1626631 /gene="pykF" /locus_tag="b1676" /gene_synonym="ECK1672" /gene_synonym="JW1666" /db_xref="EcoGene:EG10804" CDS 1625219..1626631 /gene="pykF" /locus_tag="b1676" /gene_synonym="ECK1672" /gene_synonym="JW1666" /EC_number="2.7.1.40" /function="enzyme; Energy metabolism, carbon: Glycolysis" /experiment="N-terminus verified by Edman degradation: PMID 1859631,9298646" /note="pyruvate kinase I (formerly F), fructose stimulated; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="pyruvate kinase I" /protein_id="AAC74746.1" /db_xref="GI:1787965" /db_xref="ASAP:ABE-0005600" /db_xref="UniProtKB/Swiss-Prot:P0AD61" /db_xref="EcoGene:EG10804" /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV MVSGALVPSGTTNTASVHVL" gene 1626942..1627178 /gene="lpp" /locus_tag="b1677" /gene_synonym="ECK1673" /gene_synonym="JW1667" /gene_synonym="mlpA" /gene_synonym="mulI" /db_xref="EcoGene:EG10544" CDS 1626942..1627178 /gene="lpp" /locus_tag="b1677" /gene_synonym="ECK1673" /gene_synonym="JW1667" /gene_synonym="mlpA" /gene_synonym="mulI" /function="membrane; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="murein lipoprotein" /protein_id="AAC74747.1" /db_xref="GI:1787967" /db_xref="ASAP:ABE-0005603" /db_xref="UniProtKB/Swiss-Prot:P69776" /db_xref="EcoGene:EG10544" /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK" gene complement(1627242..1628246) /gene="ldtE" /locus_tag="b1678" /gene_synonym="ECK1674" /gene_synonym="JW1668" /gene_synonym="ynhG" /db_xref="EcoGene:EG14015" CDS complement(1627242..1628246) /gene="ldtE" /locus_tag="b1678" /gene_synonym="ECK1674" /gene_synonym="JW1668" /gene_synonym="ynhG" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="murein L,D-transpeptidase" /protein_id="AAC74748.1" /db_xref="GI:1787968" /db_xref="ASAP:ABE-0005605" /db_xref="UniProtKB/Swiss-Prot:P76193" /db_xref="EcoGene:EG14015" /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRVTQ " gene complement(1628395..1628811) /gene="sufE" /locus_tag="b1679" /gene_synonym="ECK1675" /gene_synonym="JW1669" /gene_synonym="ynhA" /db_xref="EcoGene:EG13961" CDS complement(1628395..1628811) /gene="sufE" /locus_tag="b1679" /gene_synonym="ECK1675" /gene_synonym="JW1669" /gene_synonym="ynhA" /codon_start=1 /transl_table=11 /product="sulfur acceptor protein" /protein_id="AAC74749.1" /db_xref="GI:1787969" /db_xref="ASAP:ABE-0005608" /db_xref="UniProtKB/Swiss-Prot:P76194" /db_xref="EcoGene:EG13961" /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP QNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS" gene complement(1628824..1630044) /gene="sufS" /locus_tag="b1680" /gene_synonym="csdB" /gene_synonym="ECK1676" /gene_synonym="JW1670" /gene_synonym="ynhB" /db_xref="EcoGene:EG13962" CDS complement(1628824..1630044) /gene="sufS" /locus_tag="b1680" /gene_synonym="csdB" /gene_synonym="ECK1676" /gene_synonym="JW1670" /gene_synonym="ynhB" /EC_number="4.4.1.16" /experiment="N-terminus verified by Edman degradation: PMID 10329673" /codon_start=1 /transl_table=11 /product="cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent" /protein_id="AAC74750.1" /db_xref="GI:1787970" /db_xref="ASAP:ABE-0005610" /db_xref="UniProtKB/Swiss-Prot:P77444" /db_xref="EcoGene:EG13962" /translation="MIFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA GTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGV IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD RLVTGLQRIHRLLG" gene complement(1630041..1631312) /gene="sufD" /locus_tag="b1681" /gene_synonym="ECK1677" /gene_synonym="JW1671" /gene_synonym="ynhC" /db_xref="EcoGene:EG13963" CDS complement(1630041..1631312) /gene="sufD" /locus_tag="b1681" /gene_synonym="ECK1677" /gene_synonym="JW1671" /gene_synonym="ynhC" /codon_start=1 /transl_table=11 /product="component of SufBCD Fe-S cluster assembly scaffold" /protein_id="AAC74751.1" /db_xref="GI:1787971" /db_xref="ASAP:ABE-0005617" /db_xref="UniProtKB/Swiss-Prot:P77689" /db_xref="EcoGene:EG13963" /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR KHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSDATE GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQG VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYA FAAELTEALRDEGLKQQVLARIGQRLPGGAR" gene complement(1631287..1632033) /gene="sufC" /locus_tag="b1682" /gene_synonym="ECK1678" /gene_synonym="JW1672" /gene_synonym="ynhD" /db_xref="EcoGene:EG13964" CDS complement(1631287..1632033) /gene="sufC" /locus_tag="b1682" /gene_synonym="ECK1678" /gene_synonym="JW1672" /gene_synonym="ynhD" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein" /protein_id="AAC74752.1" /db_xref="GI:1787972" /db_xref="ASAP:ABE-0005619" /db_xref="UniProtKB/Swiss-Prot:P77499" /db_xref="EcoGene:EG13964" /translation="MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLS ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ" gene complement(1632043..1633530) /gene="sufB" /locus_tag="b1683" /gene_synonym="ECK1679" /gene_synonym="JW5273" /gene_synonym="ynhE" /db_xref="EcoGene:EG13965" CDS complement(1632043..1633530) /gene="sufB" /locus_tag="b1683" /gene_synonym="ECK1679" /gene_synonym="JW5273" /gene_synonym="ynhE" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="component of SufBCD Fe-S cluster assembly scaffold" /protein_id="AAC74753.2" /db_xref="GI:87081955" /db_xref="ASAP:ABE-0005621" /db_xref="UniProtKB/Swiss-Prot:P77522" /db_xref="EcoGene:EG13965" /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG" gene complement(1633539..1633907) /gene="sufA" /locus_tag="b1684" /gene_synonym="ECK1680" /gene_synonym="JW1674" /gene_synonym="ydiC" /db_xref="EcoGene:EG11378" CDS complement(1633539..1633907) /gene="sufA" /locus_tag="b1684" /gene_synonym="ECK1680" /gene_synonym="JW1674" /gene_synonym="ydiC" /codon_start=1 /transl_table=11 /product="Fe-S cluster assembly protein" /protein_id="AAC74754.1" /db_xref="GI:1787974" /db_xref="ASAP:ABE-0005624" /db_xref="UniProtKB/Swiss-Prot:P77667" /db_xref="EcoGene:EG11378" /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI FKFHNPKAQNECGCGESFGV" gene complement(1634234..1634301) /gene="rydB" /locus_tag="b4430" /gene_synonym="ECK1681" /gene_synonym="IS082" /gene_synonym="JWR0236" /gene_synonym="tpe7" /db_xref="EcoGene:EG31145" ncRNA complement(1634234..1634301) /ncRNA_class="other" /gene="rydB" /locus_tag="b4430" /gene_synonym="ECK1681" /gene_synonym="IS082" /gene_synonym="JWR0236" /gene_synonym="tpe7" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047250" /db_xref="EcoGene:EG31145" gene complement(1634455..1634643) /gene="ydiH" /locus_tag="b1685" /gene_synonym="ECK1682" /gene_synonym="JW1675" /db_xref="EcoGene:EG13967" CDS complement(1634455..1634643) /gene="ydiH" /locus_tag="b1685" /gene_synonym="ECK1682" /gene_synonym="JW1675" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74755.2" /db_xref="GI:226510945" /db_xref="ASAP:ABE-0005626" /db_xref="UniProtKB/Swiss-Prot:P64476" /db_xref="EcoGene:EG13967" /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL SSAELKEEIYFAWRLGVH" gene complement(1634743..1635153) /gene="menI" /locus_tag="b1686" /gene_synonym="ECK1683" /gene_synonym="JW1676" /gene_synonym="ydiI" /db_xref="EcoGene:EG13968" CDS complement(1634743..1635153) /gene="menI" /locus_tag="b1686" /gene_synonym="ECK1683" /gene_synonym="JW1676" /gene_synonym="ydiI" /EC_number="3.1.2.28" /function="Enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase" /protein_id="AAC74756.1" /db_xref="GI:1787976" /db_xref="ASAP:ABE-0005628" /db_xref="UniProtKB/Swiss-Prot:P77781" /db_xref="EcoGene:EG13968" /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVC KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL" gene complement(1635150..1638206) /gene="ydiJ" /locus_tag="b1687" /gene_synonym="ECK1684" /gene_synonym="JW1677" /db_xref="EcoGene:EG13969" CDS complement(1635150..1638206) /gene="ydiJ" /locus_tag="b1687" /gene_synonym="ECK1684" /gene_synonym="JW1677" /function="putative enzyme; Not classified" /note="putative oxidase" /codon_start=1 /transl_table=11 /product="putative FAD-linked oxidoreductase" /protein_id="AAC74757.1" /db_xref="GI:1787977" /db_xref="ASAP:ABE-0005632" /db_xref="UniProtKB/Swiss-Prot:P77748" /db_xref="EcoGene:EG13969" /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT DASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVY QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY GMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQ CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK" gene 1638595..1639707 /gene="ydiK" /locus_tag="b1688" /gene_synonym="ECK1685" /gene_synonym="JW1678" /db_xref="EcoGene:EG13970" CDS 1638595..1639707 /gene="ydiK" /locus_tag="b1688" /gene_synonym="ECK1685" /gene_synonym="JW1678" /codon_start=1 /transl_table=11 /product="UPF0118 family inner membrane protein" /protein_id="AAC74758.1" /db_xref="GI:1787979" /db_xref="ASAP:ABE-0005637" /db_xref="UniProtKB/Swiss-Prot:P0AFS7" /db_xref="EcoGene:EG13970" /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK" gene 1639893..1639998 /gene="rprA" /locus_tag="b4431" /gene_synonym="ECK1686" /gene_synonym="IS083" /gene_synonym="JWR0203" /gene_synonym="psrA5" /db_xref="EcoGene:EG31130" ncRNA 1639893..1639998 /ncRNA_class="antisense_RNA" /gene="rprA" /locus_tag="b4431" /gene_synonym="ECK1686" /gene_synonym="IS083" /gene_synonym="JWR0203" /gene_synonym="psrA5" /product="sRNA antisense activator for RpoS translation, Hfq-dependent" /note="RprA RNA; positive regulatory RNA for rpoS translation" /db_xref="ASAP:ABE-0047251" /db_xref="EcoGene:EG31130" gene 1640136..1640492 /gene="ydiL" /locus_tag="b1689" /gene_synonym="ECK1687" /gene_synonym="JW1679" /db_xref="EcoGene:EG13971" CDS 1640136..1640492 /gene="ydiL" /locus_tag="b1689" /gene_synonym="ECK1687" /gene_synonym="JW1679" /codon_start=1 /transl_table=11 /product="putative HTH domain DNA-binding protein" /protein_id="AAC74759.2" /db_xref="GI:87081956" /db_xref="ASAP:ABE-0005641" /db_xref="UniProtKB/Swiss-Prot:P76196" /db_xref="EcoGene:EG13971" /translation="MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIP DRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIY QSVAAELYAHDLERLC" gene 1640592..1641806 /gene="ydiM" /locus_tag="b1690" /gene_synonym="ECK1688" /gene_synonym="JW1680" /db_xref="EcoGene:EG13972" CDS 1640592..1641806 /gene="ydiM" /locus_tag="b1690" /gene_synonym="ECK1688" /gene_synonym="JW1680" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS transporter, membrane protein" /protein_id="AAC74760.1" /db_xref="GI:1787981" /db_xref="ASAP:ABE-0005645" /db_xref="UniProtKB/Swiss-Prot:P76197" /db_xref="EcoGene:EG13972" /translation="MKNPYFPTALGLYFNYLVHGMGVLLMSLNMASLETLWQTNAAGV SIVISSLGIGRLSVLLFAGLLSDRFGRRPFIMLGMCCYMAFFFGILQTNNIIIAYVFG FLAGMANSFLDAGTYPSLMEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWF GWSFMIAAGIMFINALFLYRCTFPPHPGRRLPVIKKTTSSTEHRCSIIDLASYTLYGY ISMATFYLVSQWLAQYGQFVAGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTT LLMLYTFISFIALFTVCLHPTFYVVIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGK ATGIYYSAGSIATFTIPLITAHLSQRSIADIMWFDTAIAAIGFLLALFIGLRSRKKTR HHSLKENVAPGG" gene 1642033..1643298 /gene="ydiN" /locus_tag="b1691" /gene_synonym="ECK1689" /gene_synonym="JW5274" /db_xref="EcoGene:EG13973" CDS 1642033..1643298 /gene="ydiN" /locus_tag="b1691" /gene_synonym="ECK1689" /gene_synonym="JW5274" /function="putative transport; Not classified" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS transporter, membrane protein" /protein_id="AAC74761.4" /db_xref="GI:226510946" /db_xref="ASAP:ABE-0005648" /db_xref="UniProtKB/Swiss-Prot:P76198" /db_xref="EcoGene:EG13973" /translation="MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFS TDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLT LAYGLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYML LNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVTNELPQMNSKPLVWLEGVSS VLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKM VRPIWANVFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFP KSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRY YRVFIIPENDVRFGERKFCTRLNTIKHRG" gene 1643310..1644176 /gene="ydiB" /locus_tag="b1692" /gene_synonym="ECK1690" /gene_synonym="JW1682" /db_xref="EcoGene:EG11234" CDS 1643310..1644176 /gene="ydiB" /locus_tag="b1692" /gene_synonym="ECK1690" /gene_synonym="JW1682" /EC_number="1.1.1.25" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="quinate/shikimate 5-dehydrogenase, NAD(P)-binding" /protein_id="AAC74762.1" /db_xref="GI:1787983" /db_xref="ASAP:ABE-0005651" /db_xref="UniProtKB/Swiss-Prot:P0A6D5" /db_xref="EcoGene:EG11234" /translation="MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEV DNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLR GYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVN DISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFP LEYVKQVMGFGA" gene 1644207..1644965 /gene="aroD" /locus_tag="b1693" /gene_synonym="ECK1691" /gene_synonym="JW1683" /db_xref="EcoGene:EG10076" CDS 1644207..1644965 /gene="aroD" /locus_tag="b1693" /gene_synonym="ECK1691" /gene_synonym="JW1683" /EC_number="4.2.1.10" /function="enzyme; Amino acid biosynthesis: Chorismate" /experiment="N-terminus verified by Edman degradation: PMID 3541912" /note="GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="AAC74763.1" /db_xref="GI:1787984" /db_xref="ASAP:ABE-0005653" /db_xref="UniProtKB/Swiss-Prot:P05194" /db_xref="EcoGene:EG10076" /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDI LEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR AAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRK MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA" gene 1645108..1646703 /gene="ydiF" /locus_tag="b1694" /gene_synonym="ECK1692" /gene_synonym="JW1684" /db_xref="EcoGene:EG12432" CDS 1645108..1646703 /gene="ydiF" /locus_tag="b1694" /gene_synonym="ECK1692" /gene_synonym="JW1684" /function="putative enzyme; Not classified" /note="putative enzyme; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit" /protein_id="AAC74764.1" /db_xref="GI:1787985" /db_xref="ASAP:ABE-0005656" /db_xref="UniProtKB/Swiss-Prot:P37766" /db_xref="EcoGene:EG12432" /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQTQLYGGAPVNRFISGDFTLD DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET GPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKF NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEITDGKLNIVQEGRVKKFIRELPEI TFSGKIALERGLDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE LKLMDERLFIDAAMGFVLPEAAH" gene 1646717..1647868 /gene="ydiO" /locus_tag="b1695" /gene_synonym="ECK1693" /gene_synonym="JW5275" /db_xref="EcoGene:EG13974" CDS 1646717..1647868 /gene="ydiO" /locus_tag="b1695" /gene_synonym="ECK1693" /gene_synonym="JW5275" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /protein_id="AAC74765.2" /db_xref="GI:87081958" /db_xref="ASAP:ABE-0005658" /db_xref="UniProtKB/Swiss-Prot:P0A9U8" /db_xref="EcoGene:EG13974" /translation="MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMR ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK" gene complement(1647911..1648822) /gene="ydiP" /locus_tag="b1696" /gene_synonym="ECK1694" /gene_synonym="JW1686" /db_xref="EcoGene:EG13975" CDS complement(1647911..1648822) /gene="ydiP" /locus_tag="b1696" /gene_synonym="ECK1694" /gene_synonym="JW1686" /function="putative regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74766.1" /db_xref="GI:1787987" /db_xref="ASAP:ABE-0005660" /db_xref="UniProtKB/Swiss-Prot:P77402" /db_xref="EcoGene:EG13975" /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS DYRRQFKNCFAEQEILSEFPQPVSLVG" gene 1649138..1649902 /gene="ydiQ" /locus_tag="b1697" /gene_synonym="ECK1695" /gene_synonym="JW5276" /db_xref="EcoGene:EG13976" CDS 1649138..1649902 /gene="ydiQ" /locus_tag="b1697" /gene_synonym="ECK1695" /gene_synonym="JW5276" /function="putative enzyme; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative electron transfer flavoprotein subunit" /protein_id="AAC74767.1" /db_xref="GI:2367123" /db_xref="ASAP:ABE-0005666" /db_xref="UniProtKB/Swiss-Prot:P76201" /db_xref="EcoGene:EG13976" /translation="MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAA SQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALA AAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLE DDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAEL VGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN" gene 1649922..1650860 /gene="ydiR" /locus_tag="b1698" /gene_synonym="ECK1696" /gene_synonym="JW1688" /db_xref="EcoGene:EG13977" CDS 1649922..1650860 /gene="ydiR" /locus_tag="b1698" /gene_synonym="ECK1696" /gene_synonym="JW1688" /function="putative enzyme; Not classified" /note="putative flavoprotein; GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative electron transfer flavoprotein, FAD-binding subunit" /protein_id="AAC74768.1" /db_xref="GI:1787990" /db_xref="ASAP:ABE-0005668" /db_xref="UniProtKB/Swiss-Prot:P77378" /db_xref="EcoGene:EG13977" /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV MPYGPKCLYVLAQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQL NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR" gene 1650916..1652205 /gene="ydiS" /locus_tag="b1699" /gene_synonym="ECK1697" /gene_synonym="JW1689" /db_xref="EcoGene:EG13978" CDS 1650916..1652205 /gene="ydiS" /locus_tag="b1699" /gene_synonym="ECK1697" /gene_synonym="JW1689" /function="putative enzyme; Not classified" /note="flavoprotein; probably electron transport; GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74769.1" /db_xref="GI:1787991" /db_xref="ASAP:ABE-0005671" /db_xref="UniProtKB/Swiss-Prot:P77337" /db_xref="EcoGene:EG13978" /translation="MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKN MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY SAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA KERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMF TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL" gene 1652202..1652495 /gene="ydiT" /locus_tag="b1700" /gene_synonym="ECK1698" /gene_synonym="JW1690" /db_xref="EcoGene:EG13979" CDS 1652202..1652495 /gene="ydiT" /locus_tag="b1700" /gene_synonym="ECK1698" /gene_synonym="JW1690" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative 3Fe-4S ferredoxin-type protein" /protein_id="AAC74770.1" /db_xref="GI:1787992" /db_xref="ASAP:ABE-0005674" /db_xref="UniProtKB/Swiss-Prot:P77714" /db_xref="EcoGene:EG13979" /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKA CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG" gene 1652552..1654198 /gene="fadK" /locus_tag="b1701" /gene_synonym="ECK1699" /gene_synonym="JW5910" /gene_synonym="ydiD" /db_xref="EcoGene:EG12357" CDS 1652552..1654198 /gene="fadK" /locus_tag="b1701" /gene_synonym="ECK1699" /gene_synonym="JW5910" /gene_synonym="ydiD" /function="putative enzyme; Not classified" /note="putative ligase/synthetase" /codon_start=1 /transl_table=11 /product="short chain acyl-CoA synthetase, anaerobic" /protein_id="AAC74771.2" /db_xref="GI:145693145" /db_xref="ASAP:ABE-0005676" /db_xref="UniProtKB/Swiss-Prot:P38135" /db_xref="EcoGene:EG12357" /translation="MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVV DNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVS VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL APATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER AYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQ RCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVY GSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNV FMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVE DILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKY PEHIVVIEKLPRTTSGKIQKFLLRKDIMRRLTQDVCEEIE" gene complement(1654255..1656633) /gene="ppsA" /locus_tag="b1702" /gene_synonym="ECK1700" /gene_synonym="JW1692" /gene_synonym="pps" /db_xref="EcoGene:EG10759" CDS complement(1654255..1656633) /gene="ppsA" /locus_tag="b1702" /gene_synonym="ECK1700" /gene_synonym="JW1692" /gene_synonym="pps" /EC_number="2.7.9.2" /function="enzyme; Central intermediary metabolism: Gluconeogenesis" /note="GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate synthase" /protein_id="AAC74772.1" /db_xref="GI:1787994" /db_xref="ASAP:ABE-0005678" /db_xref="UniProtKB/Swiss-Prot:P23538" /db_xref="EcoGene:EG10759" /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK" gene 1656966..1657799 /gene="ppsR" /locus_tag="b1703" /gene_synonym="duf299" /gene_synonym="ECK1701" /gene_synonym="JW1693" /gene_synonym="ydiA" /db_xref="EcoGene:EG11132" CDS 1656966..1657799 /gene="ppsR" /locus_tag="b1703" /gene_synonym="duf299" /gene_synonym="ECK1701" /gene_synonym="JW1693" /gene_synonym="ydiA" /function="regulatory enzyme; Central intermediary metabolism: Gluconeogenesis" /codon_start=1 /transl_table=11 /product="PEP synthase kinase and PEP synthase pyrophosphorylase" /protein_id="AAC74773.1" /db_xref="GI:1787995" /db_xref="ASAP:ABE-0005682" /db_xref="UniProtKB/Swiss-Prot:P0A8A4" /db_xref="EcoGene:EG11132" /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM Y" gene 1657956..1659002 /gene="aroH" /locus_tag="b1704" /gene_synonym="ECK1702" /gene_synonym="JW1694" /db_xref="EcoGene:EG10080" CDS 1657956..1659002 /gene="aroH" /locus_tag="b1704" /gene_synonym="ECK1702" /gene_synonym="JW1694" /EC_number="2.5.1.54" /function="enzyme; Amino acid biosynthesis: Tryptophan" /experiment="N-terminus verified by Edman degradation: PMID 6167722" /note="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible); GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible" /protein_id="AAC74774.1" /db_xref="GI:1787996" /db_xref="ASAP:ABE-0005686" /db_xref="UniProtKB/Swiss-Prot:P00887" /db_xref="EcoGene:EG10080" /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTE RLVEKLASAVDTRF" gene 1659134..1659325 /gene="ydiE" /locus_tag="b1705" /gene_synonym="ECK1703" /gene_synonym="JW1695" /db_xref="EcoGene:EG12391" CDS 1659134..1659325 /gene="ydiE" /locus_tag="b1705" /gene_synonym="ECK1703" /gene_synonym="JW1695" /codon_start=1 /transl_table=11 /product="hemin uptake protein HemP homolog" /protein_id="AAC74775.1" /db_xref="GI:1787998" /db_xref="ASAP:ABE-0005692" /db_xref="UniProtKB/Swiss-Prot:P0ACX9" /db_xref="EcoGene:EG12391" /translation="MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDH DGQEYLLRKTQAGKLLLTK" gene complement(1659329..1660765) /gene="ydiU" /locus_tag="b1706" /gene_synonym="ECK1704" /gene_synonym="JW1696" /db_xref="EcoGene:EG13980" CDS complement(1659329..1660765) /gene="ydiU" /locus_tag="b1706" /gene_synonym="ECK1704" /gene_synonym="JW1696" /codon_start=1 /transl_table=11 /product="UPF0061 family protein" /protein_id="AAC74776.1" /db_xref="GI:1787999" /db_xref="ASAP:ABE-0005694" /db_xref="UniProtKB/Swiss-Prot:P77649" /db_xref="EcoGene:EG13980" /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIP SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLADDEDKYRLW FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGERMRQKLG FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW FARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEAL RNPFSDRDDDYVSRPPDWGKRLEVSCSS" gene complement(1660828..1661541) /gene="ydiV" /locus_tag="b1707" /gene_synonym="cdgR" /gene_synonym="ECK1705" /gene_synonym="JW1697" /db_xref="EcoGene:EG13981" CDS complement(1660828..1661541) /gene="ydiV" /locus_tag="b1707" /gene_synonym="cdgR" /gene_synonym="ECK1705" /gene_synonym="JW1697" /codon_start=1 /transl_table=11 /product="anti-FlhD4C2 factor, inactive EAL family phosphodiesterase" /protein_id="AAC74777.1" /db_xref="GI:1788000" /db_xref="ASAP:ABE-0005696" /db_xref="UniProtKB/Swiss-Prot:P76204" /db_xref="EcoGene:EG13981" /translation="MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIP TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG ELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHAL QGCLWPAVPINQITTLVQR" gene complement(1661788..1662252) /gene="nlpC" /locus_tag="b1708" /gene_synonym="ECK1706" /gene_synonym="JW1698" /db_xref="EcoGene:EG11133" CDS complement(1661788..1662252) /gene="nlpC" /locus_tag="b1708" /gene_synonym="ECK1706" /gene_synonym="JW1698" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /note="lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative C40 clan peptidase lipoprotein" /protein_id="AAC74778.1" /db_xref="GI:1788001" /db_xref="ASAP:ABE-0005704" /db_xref="UniProtKB/Swiss-Prot:P23898" /db_xref="EcoGene:EG11133" /translation="MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDL VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI" gene complement(1662330..1663079) /gene="btuD" /locus_tag="b1709" /gene_synonym="ECK1707" /gene_synonym="JW1699" /db_xref="EcoGene:EG10128" CDS complement(1662330..1663079) /gene="btuD" /locus_tag="b1709" /gene_synonym="ECK1707" /gene_synonym="JW1699" /EC_number="3.6.3.33" /function="transport; Transport of small molecules: Other" /note="ATP-binding component of vitamin B12 transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="vitamin B12 ABC transporter ATPase" /protein_id="AAC74779.1" /db_xref="GI:1788002" /db_xref="ASAP:ABE-0005707" /db_xref="UniProtKB/Swiss-Prot:P06611" /db_xref="EcoGene:EG10128" /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKT RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE EVLTPPNLAQAYGMNFRRLDIEGHRMLISTI" gene complement(1663079..1663630) /gene="btuE" /locus_tag="b1710" /gene_synonym="ECK1708" /gene_synonym="JW1700" /db_xref="EcoGene:EG10129" CDS complement(1663079..1663630) /gene="btuE" /locus_tag="b1710" /gene_synonym="ECK1708" /gene_synonym="JW1700" /function="transport; Transport of small molecules: Other" /note="vitamin B12 transport; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="glutathione peroxidase" /protein_id="AAC74780.1" /db_xref="GI:1788003" /db_xref="ASAP:ABE-0005709" /db_xref="UniProtKB/Swiss-Prot:P06610" /db_xref="EcoGene:EG10129" /translation="MQDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTPQYE QLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQ RFSPDMTPEDPIVMESIKLALAK" gene complement(1663693..1664673) /gene="btuC" /locus_tag="b1711" /gene_synonym="ECK1709" /gene_synonym="JW1701" /db_xref="EcoGene:EG10127" CDS complement(1663693..1664673) /gene="btuC" /locus_tag="b1711" /gene_synonym="ECK1709" /gene_synonym="JW1701" /function="transport; Transport of small molecules: Other" /note="vitamin B12 transport permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="vitamin B12 ABC transporter permease" /protein_id="AAC74781.1" /db_xref="GI:1788004" /db_xref="ASAP:ABE-0005712" /db_xref="UniProtKB/Swiss-Prot:P06609" /db_xref="EcoGene:EG10127" /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWF TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL PGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR" gene complement(1664774..1665073) /gene="ihfA" /locus_tag="b1712" /gene_synonym="ECK1710" /gene_synonym="hid" /gene_synonym="himA" /gene_synonym="JW1702" /db_xref="EcoGene:EG10440" CDS complement(1664774..1665073) /gene="ihfA" /locus_tag="b1712" /gene_synonym="ECK1710" /gene_synonym="hid" /gene_synonym="himA" /gene_synonym="JW1702" /function="factor; DNA - replication, repair, restriction/modification" /note="integration host factor (IHF), alpha subunit; site specific recombination; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="integration host factor (IHF), DNA-binding protein, alpha subunit" /protein_id="AAC74782.1" /db_xref="GI:1788005" /db_xref="ASAP:ABE-0005715" /db_xref="UniProtKB/Swiss-Prot:P0A6X7" /db_xref="EcoGene:EG10440" /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE" gene complement(1665078..1667465) /gene="pheT" /locus_tag="b1713" /gene_synonym="ECK1711" /gene_synonym="JW1703" /db_xref="EcoGene:EG10710" CDS complement(1665078..1667465) /gene="pheT" /locus_tag="b1713" /gene_synonym="ECK1711" /gene_synonym="JW1703" /EC_number="6.1.1.20" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="phenylalanine tRNA synthetase, beta-subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="phenylalanine tRNA synthetase, beta subunit" /protein_id="AAC74783.1" /db_xref="GI:1788006" /db_xref="ASAP:ABE-0005717" /db_xref="UniProtKB/Swiss-Prot:P07395" /db_xref="EcoGene:EG10710" /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI SVTPNRADCLGIIGVARDVAVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLG RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI DITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD" gene complement(1667480..1668463) /gene="pheS" /locus_tag="b1714" /gene_synonym="ECK1712" /gene_synonym="JW5277" /gene_synonym="phe-act" /db_xref="EcoGene:EG10709" CDS complement(1667480..1668463) /gene="pheS" /locus_tag="b1714" /gene_synonym="ECK1712" /gene_synonym="JW5277" /gene_synonym="phe-act" /EC_number="6.1.1.20" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="phenylalanine tRNA synthetase, alpha-subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="phenylalanine tRNA synthetase, alpha subunit" /protein_id="AAC74784.1" /db_xref="GI:1788007" /db_xref="ASAP:ABE-0005722" /db_xref="UniProtKB/Swiss-Prot:P08312" /db_xref="EcoGene:EG10709" /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK" gene complement(1668747..1668791) /gene="pheM" /locus_tag="b1715" /gene_synonym="ECK1713" /gene_synonym="JW1705" /gene_synonym="phtL" /db_xref="EcoGene:EG11272" CDS complement(1668747..1668791) /gene="pheM" /locus_tag="b1715" /gene_synonym="ECK1713" /gene_synonym="JW1705" /gene_synonym="phtL" /function="leader; Aminoacyl tRNA synthetases, tRNA modification" /note="phenylalanyl-tRNA synthetase (pheST) operon leader peptide; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase operon leader peptide" /protein_id="AAC74785.1" /db_xref="GI:1788008" /db_xref="ASAP:ABE-0005727" /db_xref="UniProtKB/Swiss-Prot:P0AD74" /db_xref="EcoGene:EG11272" /translation="MNAAIFRFFFYFST" gene complement(1668914..1669270) /gene="rplT" /locus_tag="b1716" /gene_synonym="ECK1714" /gene_synonym="JW1706" /gene_synonym="pdzA" /db_xref="EcoGene:EG10881" CDS complement(1668914..1669270) /gene="rplT" /locus_tag="b1716" /gene_synonym="ECK1714" /gene_synonym="JW1706" /gene_synonym="pdzA" /function="structural component; Ribosomal proteins - synthesis, modification" /note="50S ribosomal subunit protein L20, and regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L20" /protein_id="AAC74786.1" /db_xref="GI:1788009" /db_xref="ASAP:ABE-0005729" /db_xref="UniProtKB/Swiss-Prot:P0A7L3" /db_xref="EcoGene:EG10881" /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD KVAFTALVEKAKAALA" gene complement(1669323..1669520) /gene="rpmI" /locus_tag="b1717" /gene_synonym="ECK1715" /gene_synonym="JW1707" /db_xref="EcoGene:EG11231" CDS complement(1669323..1669520) /gene="rpmI" /locus_tag="b1717" /gene_synonym="ECK1715" /gene_synonym="JW1707" /function="structural component; Ribosomal proteins - synthesis, modification" /note="50S ribosomal subunit protein A; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L35" /protein_id="AAC74787.1" /db_xref="GI:1788010" /db_xref="ASAP:ABE-0005732" /db_xref="UniProtKB/Swiss-Prot:P0A7Q1" /db_xref="EcoGene:EG11231" /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL RPKAMVSKGDLGLVIACLPYA" gene complement(1669617..1670159) /gene="infC" /locus_tag="b1718" /gene_synonym="ECK1716" /gene_synonym="fit" /gene_synonym="JW5829" /gene_synonym="srjA" /db_xref="EcoGene:EG10506" CDS complement(1669617..1670159) /gene="infC" /locus_tag="b1718" /gene_synonym="ECK1716" /gene_synonym="fit" /gene_synonym="JW5829" /gene_synonym="srjA" /function="factor; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 330233" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="AAC74788.1" /db_xref="GI:1788012" /db_xref="ASAP:ABE-0005734" /db_xref="UniProtKB/Swiss-Prot:P0A707" /db_xref="EcoGene:EG10506" /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES FPTKIEGRQMIMVLAPKKKQ" gene complement(1670163..1672091) /gene="thrS" /locus_tag="b1719" /gene_synonym="ECK1717" /gene_synonym="JW1709" /db_xref="EcoGene:EG11001" CDS complement(1670163..1672091) /gene="thrS" /locus_tag="b1719" /gene_synonym="ECK1717" /gene_synonym="JW1709" /EC_number="6.1.1.3" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="threonine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="threonyl-tRNA synthetase" /protein_id="AAC74789.1" /db_xref="GI:1788013" /db_xref="ASAP:ABE-0005736" /db_xref="UniProtKB/Swiss-Prot:P0A8M3" /db_xref="EcoGene:EG11001" /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSIL DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV IEKLQQEIRSRSLKQLEE" gene 1672615..1674514 /gene="arpB" /locus_tag="b4494" /gene_synonym="ECK1718" /gene_synonym="JW1710" /gene_synonym="JW5278" /gene_synonym="ydiW" /gene_synonym="ydiX" /pseudo /db_xref="EcoGene:EG13983" CDS join(1672615..1673040,1673039..1674514) /gene="arpB" /locus_tag="b4494" /gene_synonym="ECK1718" /gene_synonym="JW1710" /gene_synonym="JW5278" /gene_synonym="ydiW" /gene_synonym="ydiX" /note="pseudogene, ankyrin repeats" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0005740" /db_xref="ASAP:ABE-0005742" /db_xref="ASAP:ABE-0285095" /db_xref="UniProtKB/Swiss-Prot:P76205" /db_xref="EcoGene:EG13983" gene 1674686..1674793 /gene="yniD" /locus_tag="b4535" /gene_synonym="ECK1719" /gene_synonym="JW5911" /db_xref="EcoGene:EG14423" CDS 1674686..1674793 /gene="yniD" /locus_tag="b4535" /gene_synonym="ECK1719" /gene_synonym="JW5911" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18671.2" /db_xref="GI:145693146" /db_xref="ASAP:ABE-0285056" /db_xref="UniProtKB/Swiss-Prot:Q2EES1" /db_xref="EcoGene:EG14423" /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG" gene complement(1674846..1675604) /gene="ydiY" /locus_tag="b1722" /gene_synonym="ECK1720" /gene_synonym="JW1711" /db_xref="EcoGene:EG13984" CDS complement(1674846..1675604) /gene="ydiY" /locus_tag="b1722" /gene_synonym="ECK1720" /gene_synonym="JW1711" /codon_start=1 /transl_table=11 /product="acid-inducible putative outer membrane protein" /protein_id="AAC74792.1" /db_xref="GI:1788016" /db_xref="ASAP:ABE-0005744" /db_xref="UniProtKB/Swiss-Prot:P76206" /db_xref="EcoGene:EG13984" /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE GNLNAGYLAQSGNTKSSSLTADTTMTWYGHTTAWSLWGNASNTSSNDERSSEKYAAGG RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF GLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM" gene 1675891..1676820 /gene="pfkB" /locus_tag="b1723" /gene_synonym="ECK1721" /gene_synonym="JW5280" /db_xref="EcoGene:EG10700" CDS 1675891..1676820 /gene="pfkB" /locus_tag="b1723" /gene_synonym="ECK1721" /gene_synonym="JW5280" /EC_number="2.7.1.11" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="6-phosphofructokinase II; suppressor of pfkA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="6-phosphofructokinase II" /protein_id="AAC74793.1" /db_xref="GI:1788017" /db_xref="ASAP:ABE-0005748" /db_xref="UniProtKB/Swiss-Prot:P06999" /db_xref="EcoGene:EG10700" /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQG IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR" gene 1676921..1677211 /gene="ydiZ" /locus_tag="b1724" /gene_synonym="ECK1722" /gene_synonym="JW1713" /db_xref="EcoGene:EG13985" CDS 1676921..1677211 /gene="ydiZ" /locus_tag="b1724" /gene_synonym="ECK1722" /gene_synonym="JW1713" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74794.1" /db_xref="GI:1788018" /db_xref="ASAP:ABE-0005751" /db_xref="UniProtKB/Swiss-Prot:P64479" /db_xref="EcoGene:EG13985" /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK" gene 1677317..1678177 /gene="yniA" /locus_tag="b1725" /gene_synonym="ECK1723" /gene_synonym="JW1714" /db_xref="EcoGene:EG13986" CDS 1677317..1678177 /gene="yniA" /locus_tag="b1725" /gene_synonym="ECK1723" /gene_synonym="JW1714" /codon_start=1 /transl_table=11 /product="fructosamine kinase family protein" /protein_id="AAC74795.1" /db_xref="GI:1788019" /db_xref="ASAP:ABE-0005755" /db_xref="UniProtKB/Swiss-Prot:P77739" /db_xref="EcoGene:EG13986" /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS AFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA QQSLDRLLAA" gene complement(1678218..1678754) /gene="yniB" /locus_tag="b1726" /gene_synonym="ECK1724" /gene_synonym="JW1715" /db_xref="EcoGene:EG13987" CDS complement(1678218..1678754) /gene="yniB" /locus_tag="b1726" /gene_synonym="ECK1724" /gene_synonym="JW1715" /codon_start=1 /transl_table=11 /product="putative inner membrane protein" /protein_id="AAC74796.1" /db_xref="GI:1788020" /db_xref="ASAP:ABE-0005757" /db_xref="UniProtKB/Swiss-Prot:P76208" /db_xref="EcoGene:EG13987" /translation="MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKE GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL PVICIAAGYVFFSLLGFI" gene 1678901..1679569 /gene="yniC" /locus_tag="b1727" /gene_synonym="ECK1725" /gene_synonym="JW1716" /db_xref="EcoGene:EG13988" CDS 1678901..1679569 /gene="yniC" /locus_tag="b1727" /gene_synonym="ECK1725" /gene_synonym="JW1716" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="2-deoxyglucose-6-P phosphatase" /protein_id="AAC74797.1" /db_xref="GI:1788021" /db_xref="ASAP:ABE-0005761" /db_xref="UniProtKB/Swiss-Prot:P77247" /db_xref="EcoGene:EG13988" /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAK DLLG" gene 1679732..1680322 /gene="ydjM" /locus_tag="b1728" /gene_synonym="ECK1726" /gene_synonym="JW5281" /db_xref="EcoGene:EG13989" CDS 1679732..1680322 /gene="ydjM" /locus_tag="b1728" /gene_synonym="ECK1726" /gene_synonym="JW5281" /note="GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="inner membrane protein regulated by LexA" /protein_id="AAC74798.4" /db_xref="GI:226510947" /db_xref="ASAP:ABE-0005768" /db_xref="UniProtKB/Swiss-Prot:P64481" /db_xref="EcoGene:EG13989" /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY" gene 1680455..1681846 /gene="ydjN" /locus_tag="b1729" /gene_synonym="ECK1727" /gene_synonym="JW1718" /db_xref="EcoGene:EG13990" CDS 1680455..1681846 /gene="ydjN" /locus_tag="b1729" /gene_synonym="ECK1727" /gene_synonym="JW1718" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC74799.1" /db_xref="GI:1788024" /db_xref="ASAP:ABE-0005771" /db_xref="UniProtKB/Swiss-Prot:P77529" /db_xref="EcoGene:EG13990" /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA ILDSEDDAELAHH" gene complement(1681850..1682653) /gene="ydjO" /locus_tag="b1730" /gene_synonym="ECK1728" /gene_synonym="JW1719" /db_xref="EcoGene:EG13991" CDS complement(1681850..1682653) /gene="ydjO" /locus_tag="b1730" /gene_synonym="ECK1728" /gene_synonym="JW1719" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74800.2" /db_xref="GI:226510948" /db_xref="ASAP:ABE-0005773" /db_xref="UniProtKB/Swiss-Prot:P76210" /db_xref="EcoGene:EG13991" /translation="MFSTNLIQSNYGDLNIKSLAFDSFKERLQSTMTALTFFISTGQC DCDEIAESNFNYMIAYMSNINYDASKPGAPALSFDTYLQDNVKYRVIINNLYGSEIRI RGINKDFIGMDVTSVFRPEKMTNLISIKNRLVIHYLRTIYYEQNYIHPVGSIFAAIQK NESLLKFPSIISMLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLSFSLQ AHSLSQECIDKLDIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA" gene complement(1682942..1683184) /gene="cedA" /locus_tag="b1731" /gene_synonym="ECK1729" /gene_synonym="JW1720" /gene_synonym="ydjP" /db_xref="EcoGene:EG13992" CDS complement(1682942..1683184) /gene="cedA" /locus_tag="b1731" /gene_synonym="ECK1729" /gene_synonym="JW1720" /gene_synonym="ydjP" /codon_start=1 /transl_table=11 /product="cell division modulator" /protein_id="AAC74801.2" /db_xref="GI:145693148" /db_xref="ASAP:ABE-0005776" /db_xref="UniProtKB/Swiss-Prot:P0AE60" /db_xref="EcoGene:EG13992" /translation="MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYV AFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE" gene 1683388..1685649 /gene="katE" /locus_tag="b1732" /gene_synonym="ECK1730" /gene_synonym="JW1721" /db_xref="EcoGene:EG10509" CDS 1683388..1685649 /gene="katE" /locus_tag="b1732" /gene_synonym="ECK1730" /gene_synonym="JW1721" /EC_number="1.11.1.6" /function="enzyme; Detoxification" /experiment="N-terminus verified by Edman degradation: PMID 3117785" /note="catalase; hydroperoxidase HPII(III); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="catalase HPII, heme d-containing" /protein_id="AAT48137.1" /db_xref="GI:48994891" /db_xref="ASAP:ABE-0005780" /db_xref="UniProtKB/Swiss-Prot:P21179" /db_xref="EcoGene:EG10509" /translation="MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTP PGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGP TLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKIT PVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFV HAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHT FRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEY ELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFH PGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHR MGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHP RLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIEL TDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALK AKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDAN YYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHR VWSRIPKIDKIPA" repeat_region 1685706..1685894 /note="RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site" gene complement(1685907..1686656) /gene="chbG" /locus_tag="b1733" /gene_synonym="celG" /gene_synonym="ECK1731" /gene_synonym="JW1722" /gene_synonym="ydjC" /db_xref="EcoGene:EG12198" CDS complement(1685907..1686656) /gene="chbG" /locus_tag="b1733" /gene_synonym="celG" /gene_synonym="ECK1731" /gene_synonym="JW1722" /gene_synonym="ydjC" /function="enzyme; Degradation of small molecules: N,N'-diacetylchitobiose" /codon_start=1 /transl_table=11 /product="chito-oligosaccharide deacetylase" /protein_id="AAC74803.1" /db_xref="GI:1788028" /db_xref="ASAP:ABE-0005783" /db_xref="UniProtKB/Swiss-Prot:P37794" /db_xref="EcoGene:EG12198" /translation="MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAID HAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQ ELVSQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDLP VNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCF PRLTELDVLTSASLKGAIAQRGYRLGSYRDV" gene complement(1686669..1688021) /gene="chbF" /locus_tag="b1734" /gene_synonym="celF" /gene_synonym="ECK1732" /gene_synonym="JW1723" /gene_synonym="ydjD" /db_xref="EcoGene:EG10144" CDS complement(1686669..1688021) /gene="chbF" /locus_tag="b1734" /gene_synonym="celF" /gene_synonym="ECK1732" /gene_synonym="JW1723" /gene_synonym="ydjD" /EC_number="3.2.1.86" /function="enzyme; Degradation of small molecules: N,N'-diacetylchitobiose" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="phospho-chitobiase; general 6-phospho-beta-glucosidase activity" /protein_id="AAC74804.1" /db_xref="GI:1788029" /db_xref="ASAP:ABE-0005785" /db_xref="UniProtKB/Swiss-Prot:P17411" /db_xref="EcoGene:EG10144" /translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGG KPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERI PLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVY RHTGFKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLINGKSRF AELLDGVASGQLKASSVKNIFDLPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEY YKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQA EHYVNIPHHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIA ASNAALSGEFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH " gene complement(1688126..1688968) /gene="chbR" /locus_tag="b1735" /gene_synonym="celD" /gene_synonym="ECK1733" /gene_synonym="JW1724" /db_xref="EcoGene:EG10143" CDS complement(1688126..1688968) /gene="chbR" /locus_tag="b1735" /gene_synonym="celD" /gene_synonym="ECK1733" /gene_synonym="JW1724" /function="regulator; Degradation of small molecules: Carbon compounds" /note="negative transcriptional regulator of cel operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="repressor of chb operon for N,N'-diacetylchitobiose utilization" /protein_id="AAC74805.1" /db_xref="GI:1788030" /db_xref="ASAP:ABE-0005790" /db_xref="UniProtKB/Swiss-Prot:P17410" /db_xref="EcoGene:EG10143" /translation="MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDY YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRH YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT EFNQ" gene complement(1688976..1689326) /gene="chbA" /locus_tag="b1736" /gene_synonym="celC" /gene_synonym="ECK1734" /gene_synonym="JW1725" /db_xref="EcoGene:EG10142" CDS complement(1688976..1689326) /gene="chbA" /locus_tag="b1736" /gene_synonym="celC" /gene_synonym="ECK1734" /gene_synonym="JW1725" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS family enzyme IIA, cellobiose/arbutin/salicin sugar-specific; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="N,N'-diacetylchitobiose-specific enzyme IIA component of PTS" /protein_id="AAC74806.1" /db_xref="GI:1788031" /db_xref="ASAP:ABE-0005792" /db_xref="UniProtKB/Swiss-Prot:P69791" /db_xref="EcoGene:EG10142" /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARE LITELIELHEKLKA" gene complement(1689377..1690735) /gene="chbC" /locus_tag="b1737" /gene_synonym="celB" /gene_synonym="ECK1735" /gene_synonym="JW1726" /db_xref="EcoGene:EG10141" CDS complement(1689377..1690735) /gene="chbC" /locus_tag="b1737" /gene_synonym="celB" /gene_synonym="ECK1735" /gene_synonym="JW1726" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="N,N'-diacetylchitobiose-specific enzyme IIC component of PTS" /protein_id="AAC74807.1" /db_xref="GI:1788032" /db_xref="ASAP:ABE-0005795" /db_xref="UniProtKB/Swiss-Prot:P17334" /db_xref="EcoGene:EG10141" /translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAM FVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFI GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA EMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQII MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQ YGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLAL PSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTM PTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANAL KF" gene complement(1690820..1691140) /gene="chbB" /locus_tag="b1738" /gene_synonym="celA" /gene_synonym="ECK1736" /gene_synonym="JW1727" /db_xref="EcoGene:EG10140" CDS complement(1690820..1691140) /gene="chbB" /locus_tag="b1738" /gene_synonym="celA" /gene_synonym="ECK1736" /gene_synonym="JW1727" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS family enzyme IIB, cellobiose/arbutin/salicin sugar-specific; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="N,N'-diacetylchitobiose-specific enzyme IIB component of PTS" /protein_id="AAC74808.1" /db_xref="GI:1788034" /db_xref="ASAP:ABE-0005797" /db_xref="UniProtKB/Swiss-Prot:P69795" /db_xref="EcoGene:EG10140" /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK AAAN" gene complement(1691439..1691777) /gene="osmE" /locus_tag="b1739" /gene_synonym="anr" /gene_synonym="ECK1737" /gene_synonym="JW1728" /db_xref="EcoGene:EG10044" CDS complement(1691439..1691777) /gene="osmE" /locus_tag="b1739" /gene_synonym="anr" /gene_synonym="ECK1737" /gene_synonym="JW1728" /function="regulator; Global regulatory functions" /note="activator of ntrL gene; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="osmotically-inducible lipoprotein" /protein_id="AAC74809.1" /db_xref="GI:1788035" /db_xref="ASAP:ABE-0005799" /db_xref="UniProtKB/Swiss-Prot:P0ADB1" /db_xref="EcoGene:EG10044" /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA EYDTDPQAAK" gene 1691979..1692806 /gene="nadE" /locus_tag="b1740" /gene_synonym="ECK1738" /gene_synonym="efg" /gene_synonym="JW1729" /gene_synonym="ntrL" /db_xref="EcoGene:EG10663" CDS 1691979..1692806 /gene="nadE" /locus_tag="b1740" /gene_synonym="ECK1738" /gene_synonym="efg" /gene_synonym="JW1729" /gene_synonym="ntrL" /EC_number="6.3.5.1" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /experiment="N-terminus verified by Edman degradation: PMID 3025172,9298646" /note="NAD synthetase, prefers NH3 over glutamine; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="NAD synthetase, NH3/glutamine-dependent" /protein_id="AAC74810.1" /db_xref="GI:1788036" /db_xref="ASAP:ABE-0005803" /db_xref="UniProtKB/Swiss-Prot:P18843" /db_xref="EcoGene:EG10663" /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV LGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK" repeat_region 1692852..1692949 /note="RIP130 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 1693036..1693923 /gene="cho" /locus_tag="b1741" /gene_synonym="dinM" /gene_synonym="ECK1739" /gene_synonym="JW1730" /gene_synonym="sosD" /gene_synonym="ydjQ" /db_xref="EcoGene:EG13993" CDS 1693036..1693923 /gene="cho" /locus_tag="b1741" /gene_synonym="dinM" /gene_synonym="ECK1739" /gene_synonym="JW1730" /gene_synonym="sosD" /gene_synonym="ydjQ" /EC_number="3.1.25.-" /function="putative enzyme; Not classified" /note="putative excinuclease subunit" /codon_start=1 /transl_table=11 /product="endonuclease of nucleotide excision repair" /protein_id="AAC74811.1" /db_xref="GI:1788037" /db_xref="ASAP:ABE-0005807" /db_xref="UniProtKB/Swiss-Prot:P76213" /db_xref="EcoGene:EG13993" /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPL LSGNYEITELDPANDQRAS" gene complement(1693883..1694458) /gene="ves" /locus_tag="b1742" /gene_synonym="ECK1740" /gene_synonym="JW1731" /gene_synonym="ydjR" /db_xref="EcoGene:EG13994" CDS complement(1693883..1694458) /gene="ves" /locus_tag="b1742" /gene_synonym="ECK1740" /gene_synonym="JW1731" /gene_synonym="ydjR" /experiment="N-terminus verified by Edman degradation: PMID 11873911" /codon_start=1 /transl_table=11 /product="cold- and stress-inducible protein" /protein_id="AAC74812.2" /db_xref="GI:87081963" /db_xref="ASAP:ABE-0005809" /db_xref="UniProtKB/Swiss-Prot:P76214" /db_xref="EcoGene:EG13994" /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPFQPFAFAADQVVKAKLTAGQM SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ" gene complement(1694661..1695146) /gene="spy" /locus_tag="b1743" /gene_synonym="ECK1741" /gene_synonym="JW1732" /db_xref="EcoGene:EG13490" CDS complement(1694661..1695146) /gene="spy" /locus_tag="b1743" /gene_synonym="ECK1741" /gene_synonym="JW1732" /note="periplasmic protein related to spheroblast formation; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="periplasmic ATP-independent protein refolding chaperone, stress-induced" /protein_id="AAC74813.1" /db_xref="GI:1788039" /db_xref="ASAP:ABE-0005812" /db_xref="UniProtKB/Swiss-Prot:P77754" /db_xref="EcoGene:EG13490" /translation="MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKF GPHQDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKVKAE AQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA E" gene complement(1695476..1696444) /gene="astE" /locus_tag="b1744" /gene_synonym="ECK1742" /gene_synonym="JW1733" /gene_synonym="ydjS" /db_xref="EcoGene:EG13995" CDS complement(1695476..1696444) /gene="astE" /locus_tag="b1744" /gene_synonym="ECK1742" /gene_synonym="JW1733" /gene_synonym="ydjS" /EC_number="3.5.1.-" /function="enzyme; Not classified" /note="GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="succinylglutamate desuccinylase" /protein_id="AAC74814.1" /db_xref="GI:1788040" /db_xref="ASAP:ABE-0005815" /db_xref="UniProtKB/Swiss-Prot:P76215" /db_xref="EcoGene:EG13995" /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG ALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS" gene complement(1696437..1697780) /gene="astB" /locus_tag="b1745" /gene_synonym="ECK1743" /gene_synonym="JW1734" /gene_synonym="ydjT" /db_xref="EcoGene:EG13996" CDS complement(1696437..1697780) /gene="astB" /locus_tag="b1745" /gene_synonym="ECK1743" /gene_synonym="JW1734" /gene_synonym="ydjT" /EC_number="3.5.3.-" /function="enzyme; Not classified" /note="GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="succinylarginine dihydrolase" /protein_id="AAC74815.1" /db_xref="GI:1788041" /db_xref="ASAP:ABE-0005817" /db_xref="UniProtKB/Swiss-Prot:P76216" /db_xref="EcoGene:EG13996" /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ GLLKMKALADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN LRARVNGFMAIEVPATQVSVSDTVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG" gene complement(1697777..1699255) /gene="astD" /locus_tag="b1746" /gene_synonym="ECK1744" /gene_synonym="JW5282" /gene_synonym="ydjU" /db_xref="EcoGene:EG13997" CDS complement(1697777..1699255) /gene="astD" /locus_tag="b1746" /gene_synonym="ECK1744" /gene_synonym="JW5282" /gene_synonym="ydjU" /EC_number="1.2.1.-" /function="enzyme; Not classified" /note="GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="succinylglutamic semialdehyde dehydrogenase" /protein_id="AAC74816.1" /db_xref="GI:1788042" /db_xref="ASAP:ABE-0005820" /db_xref="UniProtKB/Swiss-Prot:P76217" /db_xref="EcoGene:EG13997" /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR AARAAFPRWARLSFAERHAVVERFAALLESNKAELTAIIARETGKPRWEAATEVTAMI NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF TGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW QQLEAMGGRPLLAPRLLQAGTSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDTFDEA IRMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR" gene complement(1699252..1700286) /gene="astA" /locus_tag="b1747" /gene_synonym="ECK1745" /gene_synonym="JW1736" /gene_synonym="ydjV" /db_xref="EcoGene:EG13998" CDS complement(1699252..1700286) /gene="astA" /locus_tag="b1747" /gene_synonym="ECK1745" /gene_synonym="JW1736" /gene_synonym="ydjV" /EC_number="2.3.1.109" /function="enzyme; Not classified" /note="GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="arginine succinyltransferase" /protein_id="AAC74817.1" /db_xref="GI:1788043" /db_xref="ASAP:ABE-0005822" /db_xref="UniProtKB/Swiss-Prot:P0AE37" /db_xref="EcoGene:EG13998" /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELN VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE VAEGQPAQGDFPACLVANENYHHFRVVLVRTDPATERLILTAAQLDALKCHAGDRVRL VRLCAEEKTA" gene complement(1700283..1701503) /gene="astC" /locus_tag="b1748" /gene_synonym="argM" /gene_synonym="cstC" /gene_synonym="ECK1746" /gene_synonym="JW1737" /gene_synonym="ydjW" /db_xref="EcoGene:EG13999" CDS complement(1700283..1701503) /gene="astC" /locus_tag="b1748" /gene_synonym="argM" /gene_synonym="cstC" /gene_synonym="ECK1746" /gene_synonym="JW1737" /gene_synonym="ydjW" /EC_number="2.6.1.11" /EC_number="2.6.1.17" /function="enzyme; Amino acid biosynthesis: Arginine" /note="acetylornithine delta-aminotransferase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="succinylornithine transaminase, PLP-dependent" /protein_id="AAC74818.1" /db_xref="GI:1788044" /db_xref="ASAP:ABE-0005824" /db_xref="UniProtKB/Swiss-Prot:P77581" /db_xref="EcoGene:EG13999" /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC NSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP LPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNA LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVG THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR FAAACEHFVSRGSS" gene 1701949..1702755 /gene="xthA" /locus_tag="b1749" /gene_synonym="ECK1747" /gene_synonym="JW1738" /gene_synonym="xth" /db_xref="EcoGene:EG11073" CDS 1701949..1702755 /gene="xthA" /locus_tag="b1749" /gene_synonym="ECK1747" /gene_synonym="JW1738" /gene_synonym="xth" /EC_number="3.1.11.2" /function="enzyme; Degradation of DNA" /note="GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0009314 - response to radiation" /codon_start=1 /transl_table=11 /product="exonuclease III" /protein_id="AAC74819.1" /db_xref="GI:1788046" /db_xref="ASAP:ABE-0005829" /db_xref="UniProtKB/Swiss-Prot:P09030" /db_xref="EcoGene:EG11073" /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR" gene 1702922..1703632 /gene="ydjX" /locus_tag="b1750" /gene_synonym="ECK1748" /gene_synonym="JW1739" /db_xref="EcoGene:EG14000" CDS 1702922..1703632 /gene="ydjX" /locus_tag="b1750" /gene_synonym="ECK1748" /gene_synonym="JW1739" /codon_start=1 /transl_table=11 /product="TVP38/TMEM64 family inner membrane protein" /protein_id="AAC74820.2" /db_xref="GI:87081964" /db_xref="ASAP:ABE-0005832" /db_xref="UniProtKB/Swiss-Prot:P76219" /db_xref="EcoGene:EG14000" /translation="MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG FFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW LGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWP YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKH VDLSASRRSPLTHPKNEG" gene 1703637..1704314 /gene="ydjY" /locus_tag="b1751" /gene_synonym="ECK1749" /gene_synonym="JW5283" /db_xref="EcoGene:EG14001" CDS 1703637..1704314 /gene="ydjY" /locus_tag="b1751" /gene_synonym="ECK1749" /gene_synonym="JW5283" /codon_start=1 /transl_table=11 /product="putative ferrodoxin-like lipoprotein" /protein_id="AAC74821.2" /db_xref="GI:87081965" /db_xref="ASAP:ABE-0005834" /db_xref="UniProtKB/Swiss-Prot:P76220" /db_xref="EcoGene:EG14001" /translation="MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSN SQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEAL KEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLAT VTFKIAE" gene 1704329..1705036 /gene="ydjZ" /locus_tag="b1752" /gene_synonym="ECK1750" /gene_synonym="JW1741" /db_xref="EcoGene:EG14002" CDS 1704329..1705036 /gene="ydjZ" /locus_tag="b1752" /gene_synonym="ECK1750" /gene_synonym="JW1741" /codon_start=1 /transl_table=11 /product="TVP38/TMEM64 family inner membrane protein" /protein_id="AAC74822.1" /db_xref="GI:1788049" /db_xref="ASAP:ABE-0005837" /db_xref="UniProtKB/Swiss-Prot:P76221" /db_xref="EcoGene:EG14002" /translation="MMMMQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAF AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV VIFMAKKIWLERQKRNA" gene 1705036..1705584 /gene="ynjA" /locus_tag="b1753" /gene_synonym="ECK1751" /gene_synonym="JW1742" /db_xref="EcoGene:EG14003" CDS 1705036..1705584 /gene="ynjA" /locus_tag="b1753" /gene_synonym="ECK1751" /gene_synonym="JW1742" /codon_start=1 /transl_table=11 /product="carboxymuconolactone decarboxylase family protein" /protein_id="AAC74823.1" /db_xref="GI:1788050" /db_xref="ASAP:ABE-0005839" /db_xref="UniProtKB/Swiss-Prot:P76222" /db_xref="EcoGene:EG14003" /translation="MGLPPLSKIPLILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSSDKLLAVAD WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS ARFNSAMDIPAQGLCRIPEKRS" gene 1705594..1706760 /gene="ynjB" /locus_tag="b1754" /gene_synonym="ECK1752" /gene_synonym="JW5284" /db_xref="EcoGene:EG14004" CDS 1705594..1706760 /gene="ynjB" /locus_tag="b1754" /gene_synonym="ECK1752" /gene_synonym="JW5284" /codon_start=1 /transl_table=11 /product="putative ABC transporter periplasmic binding protein" /protein_id="AAC74824.2" /db_xref="GI:87081966" /db_xref="ASAP:ABE-0005841" /db_xref="UniProtKB/Swiss-Prot:P76223" /db_xref="EcoGene:EG14004" /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA TFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI ASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAV WGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH" gene 1706733..1708268 /gene="ynjC" /locus_tag="b1755" /gene_synonym="ECK1753" /gene_synonym="JW5285" /db_xref="EcoGene:EG14005" CDS 1706733..1708268 /gene="ynjC" /locus_tag="b1755" /gene_synonym="ECK1753" /gene_synonym="JW5285" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC74825.2" /db_xref="GI:145693149" /db_xref="ASAP:ABE-0005843" /db_xref="UniProtKB/Swiss-Prot:P76224" /db_xref="EcoGene:EG14005" /translation="MATPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL FADPQLPQALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKWL LQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPT LAVISWQWLTQGDIDQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKP ATPLLPGNTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL LWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLKLDGSWTAVVWGHLLWVMPWML FILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFAVGIAQYMP TLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWVGYVRQ GLR" gene 1708268..1708921 /gene="ynjD" /locus_tag="b1756" /gene_synonym="ECK1754" /gene_synonym="JW5286" /db_xref="EcoGene:EG14006" CDS 1708268..1708921 /gene="ynjD" /locus_tag="b1756" /gene_synonym="ECK1754" /gene_synonym="JW5286" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC74826.1" /db_xref="GI:1788053" /db_xref="ASAP:ABE-0005845" /db_xref="UniProtKB/Swiss-Prot:P76909" /db_xref="EcoGene:EG14006" /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF SWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQNLLLALP ATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEP FSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR" gene 1708988..1710295 /gene="ynjE" /locus_tag="b1757" /gene_synonym="ECK1755" /gene_synonym="JW5287" /db_xref="EcoGene:EG14007" CDS 1708988..1710295 /gene="ynjE" /locus_tag="b1757" /gene_synonym="ECK1755" /gene_synonym="JW5287" /function="putative enzyme; Central intermediary metabolism: Sulfur metabolism" /note="putative thiosulfate sulfur transferase; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="molybdopterin synthase sulfurtransferase" /protein_id="AAC74827.2" /db_xref="GI:87081967" /db_xref="ASAP:ABE-0005848" /db_xref="UniProtKB/Swiss-Prot:P78067" /db_xref="EcoGene:EG14007" /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID TRPSAFYNGWPQTLNGPSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALY GNDKDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH GIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK" gene complement(1710304..1710924) /gene="ynjF" /locus_tag="b1758" /gene_synonym="ECK1756" /gene_synonym="JW1747" /db_xref="EcoGene:EG14008" CDS complement(1710304..1710924) /gene="ynjF" /locus_tag="b1758" /gene_synonym="ECK1756" /gene_synonym="JW1747" /function="putative enzyme; Not classified" /note="putative cytochrome oxidase" /codon_start=1 /transl_table=11 /product="CDP-alcohol phosphatidyltransferase family inner membrane protein" /protein_id="AAC74828.2" /db_xref="GI:87081968" /db_xref="ASAP:ABE-0005850" /db_xref="UniProtKB/Swiss-Prot:P76226" /db_xref="EcoGene:EG14008" /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP FLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFIL AAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET ILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ" gene 1711011..1711418 /gene="nudG" /locus_tag="b1759" /gene_synonym="ECK1757" /gene_synonym="JW1748" /gene_synonym="orf135" /gene_synonym="ynjG" /db_xref="EcoGene:EG14009" CDS 1711011..1711418 /gene="nudG" /locus_tag="b1759" /gene_synonym="ECK1757" /gene_synonym="JW1748" /gene_synonym="orf135" /gene_synonym="ynjG" /EC_number="3.6.1.-" /note="5-hydroxy-CTP pyrophosphohydrolase" /codon_start=1 /transl_table=11 /product="CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP" /protein_id="AAC74829.1" /db_xref="GI:1788056" /db_xref="ASAP:ABE-0005855" /db_xref="UniProtKB/Swiss-Prot:P77788" /db_xref="EcoGene:EG14009" /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDES QRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV WCSPEEALQYPLAPADIPLLEAFMALRAARPAD" gene complement(1711384..1711656) /gene="ynjH" /locus_tag="b1760" /gene_synonym="ECK1758" /gene_synonym="JW1749" /db_xref="EcoGene:EG14010" CDS complement(1711384..1711656) /gene="ynjH" /locus_tag="b1760" /gene_synonym="ECK1758" /gene_synonym="JW1749" /codon_start=1 /transl_table=11 /product="DUF1496 family protein" /protein_id="AAC74830.1" /db_xref="GI:1788057" /db_xref="ASAP:ABE-0005858" /db_xref="UniProtKB/Swiss-Prot:P76227" /db_xref="EcoGene:EG14010" /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP" gene 1711892..1713235 /gene="gdhA" /locus_tag="b1761" /gene_synonym="ECK1759" /gene_synonym="JW1750" /db_xref="EcoGene:EG10372" CDS 1711892..1713235 /gene="gdhA" /locus_tag="b1761" /gene_synonym="ECK1759" /gene_synonym="JW1750" /EC_number="1.4.1.4" /function="enzyme; Amino acid biosynthesis: Glutamate" /experiment="N-terminus verified by Edman degradation: PMID 6308576,9298646" /note="NADP-specific glutamate dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006537 - glutamate biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase, NADP-specific" /protein_id="AAC74831.1" /db_xref="GI:1788059" /db_xref="ASAP:ABE-0005865" /db_xref="UniProtKB/Swiss-Prot:P00370" /db_xref="EcoGene:EG10372" /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK YRQMSLLERLVEPERVIQFRVVWVDDRNQIQVNRAWRVQFSSAIGPYKGGMRFHPSVN LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGA DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSLPVDIALPCATQNELDVDAAHQ LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI" repeat_region 1713245..1713337 /note="REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1713352..1714392) /gene="ynjI" /locus_tag="b1762" /gene_synonym="ECK1760" /gene_synonym="JW5288" /db_xref="EcoGene:EG14011" CDS complement(1713352..1714392) /gene="ynjI" /locus_tag="b1762" /gene_synonym="ECK1760" /gene_synonym="JW5288" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC74832.2" /db_xref="GI:87081969" /db_xref="ASAP:ABE-0005867" /db_xref="UniProtKB/Swiss-Prot:P76228" /db_xref="EcoGene:EG14011" /translation="MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGF YLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQ AKGIEPLSIEKLQALQLIAPYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDI ISKRRESLEDQWGIEDSESYCALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVF PSDYISDCANHSSGKSSAKLIWAAELSWMISISSTAFQNGTIEEELAWHYIMLASRKA HELFESEEDYQKNSQMGFLYWHICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIR NVPWGASSVKYS" gene complement(1714520..1716481) /gene="topB" /locus_tag="b1763" /gene_synonym="ECK1761" /gene_synonym="JW1752" /gene_synonym="mutR" /db_xref="EcoGene:EG11014" CDS complement(1714520..1716481) /gene="topB" /locus_tag="b1763" /gene_synonym="ECK1761" /gene_synonym="JW1752" /gene_synonym="mutR" /EC_number="5.99.1.2" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2553698" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA topoisomerase III" /protein_id="AAC74833.1" /db_xref="GI:1788061" /db_xref="ASAP:ABE-0005869" /db_xref="UniProtKB/Swiss-Prot:P14294" /db_xref="EcoGene:EG11014" /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG SADKKKAAPRKRSAKKSPPADEVGSGAIA" gene complement(1716486..1717529) /gene="selD" /locus_tag="b1764" /gene_synonym="ECK1762" /gene_synonym="fdhB" /gene_synonym="JW1753" /db_xref="EcoGene:EG10943" CDS complement(1716486..1717529) /gene="selD" /locus_tag="b1764" /gene_synonym="ECK1762" /gene_synonym="fdhB" /gene_synonym="JW1753" /EC_number="2.7.9.3" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="selenophosphate synthase, H(2)Se added to acrylyl-tRNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="selenophosphate synthase" /protein_id="AAC74834.1" /db_xref="GI:1788062" /db_xref="ASAP:ABE-0005872" /db_xref="UniProtKB/Swiss-Prot:P16456" /db_xref="EcoGene:EG10943" /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTER NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL VPARGGRAMVEIR" gene complement(1717646..1718197) /gene="ydjA" /locus_tag="b1765" /gene_synonym="ECK1763" /gene_synonym="JW1754" /db_xref="EcoGene:EG11134" CDS complement(1717646..1718197) /gene="ydjA" /locus_tag="b1765" /gene_synonym="ECK1763" /gene_synonym="JW1754" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC74835.1" /db_xref="GI:1788063" /db_xref="ASAP:ABE-0005875" /db_xref="UniProtKB/Swiss-Prot:P0ACY1" /db_xref="EcoGene:EG11134" /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL GTPQLKASTSINVPDPTPFVTYF" gene 1718358..1720214 /gene="sppA" /locus_tag="b1766" /gene_synonym="ECK1764" /gene_synonym="JW1755" /db_xref="EcoGene:EG10968" CDS 1718358..1720214 /gene="sppA" /locus_tag="b1766" /gene_synonym="ECK1764" /gene_synonym="JW1755" /EC_number="3.4.-.-" /function="enzyme; Degradation of proteins, peptides, glyco" /note="protease IV, a signal peptide peptidase" /codon_start=1 /transl_table=11 /product="protease IV (signal peptide peptidase)" /protein_id="AAC74836.1" /db_xref="GI:1788064" /db_xref="ASAP:ABE-0005880" /db_xref="UniProtKB/Swiss-Prot:P08395" /db_xref="EcoGene:EG10968" /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN TIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYA LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV HTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANMR" gene 1720381..1721397 /gene="ansA" /locus_tag="b1767" /gene_synonym="ECK1765" /gene_synonym="JW1756" /db_xref="EcoGene:EG10045" CDS 1720381..1721397 /gene="ansA" /locus_tag="b1767" /gene_synonym="ECK1765" /gene_synonym="JW1756" /EC_number="3.5.1.1" /function="enzyme; Degradation of small molecules: Amino acids" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="cytoplasmic L-asparaginase 1" /protein_id="AAC74837.1" /db_xref="GI:1788065" /db_xref="ASAP:ABE-0005886" /db_xref="UniProtKB/Swiss-Prot:P0A962" /db_xref="EcoGene:EG10045" /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP EMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL TPDD" gene 1721408..1722049 /gene="pncA" /locus_tag="b1768" /gene_synonym="ECK1766" /gene_synonym="JW1757" /gene_synonym="nam" /gene_synonym="ydjB" /db_xref="EcoGene:EG11135" CDS 1721408..1722049 /gene="pncA" /locus_tag="b1768" /gene_synonym="ECK1766" /gene_synonym="JW1757" /gene_synonym="nam" /gene_synonym="ydjB" /EC_number="3.5.1.-" /EC_number="3.5.1.19" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="nicotinamidase/pyrazinamidase" /protein_id="AAC74838.2" /db_xref="GI:87081970" /db_xref="ASAP:ABE-0005891" /db_xref="UniProtKB/Swiss-Prot:P21369" /db_xref="EcoGene:EG11135" /translation="MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRG EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQ KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG" repeat_region 1722083..1722118 /note="REP132 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1722142..1723500) /gene="ydjE" /locus_tag="b1769" /gene_synonym="ECK1767" /gene_synonym="JW1758" /db_xref="EcoGene:EG12369" CDS complement(1722142..1723500) /gene="ydjE" /locus_tag="b1769" /gene_synonym="ECK1767" /gene_synonym="JW1758" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS sugar transporter, membrane protein" /protein_id="AAC74839.1" /db_xref="GI:1788068" /db_xref="ASAP:ABE-0005894" /db_xref="UniProtKB/Swiss-Prot:P38055" /db_xref="EcoGene:EG12369" /translation="MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVV LAKLVSNGWSNNFLNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAAT GAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPM LSAAIGVVVIAFFSWRIMFLLGGIGILLAWFLSGKYFIESPRWLAGKGQIAGAECQLR EVEQQIEREKSIRLPPLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNIS LYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIDHFPRRLFGSTLLI IIAVLGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVN AVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLLLCALVLSIFGIETRKVSLEEISE VN" gene complement(1723617..1724375) /gene="ydjF" /locus_tag="b1770" /gene_synonym="ECK1768" /gene_synonym="JW1759" /db_xref="EcoGene:EG13482" CDS complement(1723617..1724375) /gene="ydjF" /locus_tag="b1770" /gene_synonym="ECK1768" /gene_synonym="JW1759" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74840.1" /db_xref="GI:1788069" /db_xref="ASAP:ABE-0005897" /db_xref="UniProtKB/Swiss-Prot:P77721" /db_xref="EcoGene:EG13482" /translation="MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLE DEGFLTRTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSS STVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEI IRRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFV QLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW" gene complement(1724512..1725492) /gene="ydjG" /locus_tag="b1771" /gene_synonym="ECK1769" /gene_synonym="JW1760" /db_xref="EcoGene:EG13483" CDS complement(1724512..1725492) /gene="ydjG" /locus_tag="b1771" /gene_synonym="ECK1769" /gene_synonym="JW1760" /codon_start=1 /transl_table=11 /product="methylglyoxal reductase, NADH-dependent" /protein_id="AAC74841.1" /db_xref="GI:1788070" /db_xref="ASAP:ABE-0005901" /db_xref="UniProtKB/Swiss-Prot:P77256" /db_xref="EcoGene:EG13483" /translation="MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILE AHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGD RQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSE GKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYS PLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLAL AWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER" gene complement(1725502..1726449) /gene="ydjH" /locus_tag="b1772" /gene_synonym="ECK1770" /gene_synonym="JW5289" /db_xref="EcoGene:EG13484" CDS complement(1725502..1726449) /gene="ydjH" /locus_tag="b1772" /gene_synonym="ECK1770" /gene_synonym="JW5289" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative kinase" /protein_id="AAC74842.2" /db_xref="GI:87081971" /db_xref="ASAP:ABE-0005903" /db_xref="UniProtKB/Swiss-Prot:P77493" /db_xref="EcoGene:EG13484" /translation="MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDA INEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLV TEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLA CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNL RECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG" gene complement(1726454..1727290) /gene="ydjI" /locus_tag="b1773" /gene_synonym="ECK1771" /gene_synonym="JW1762" /db_xref="EcoGene:EG13485" CDS complement(1726454..1727290) /gene="ydjI" /locus_tag="b1773" /gene_synonym="ECK1771" /gene_synonym="JW1762" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative aldolase" /protein_id="AAC74843.1" /db_xref="GI:1788072" /db_xref="ASAP:ABE-0005906" /db_xref="UniProtKB/Swiss-Prot:P77704" /db_xref="EcoGene:EG13485" /translation="MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPV IISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMR DASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKT AISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGK AE" gene complement(1727311..1728354) /gene="ydjJ" /locus_tag="b1774" /gene_synonym="ECK1772" /gene_synonym="JW1763" /db_xref="EcoGene:EG13486" CDS complement(1727311..1728354) /gene="ydjJ" /locus_tag="b1774" /gene_synonym="ECK1772" /gene_synonym="JW1763" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC74844.1" /db_xref="GI:1788073" /db_xref="ASAP:ABE-0005908" /db_xref="UniProtKB/Swiss-Prot:P77280" /db_xref="EcoGene:EG13486" /translation="MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVH GFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCL EGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHA AMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVI NGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAI NFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNN KRDIIKGVIKISD" gene complement(1728371..1729750) /gene="ydjK" /locus_tag="b1775" /gene_synonym="ECK1773" /gene_synonym="JW5290" /db_xref="EcoGene:EG13487" CDS complement(1728371..1729750) /gene="ydjK" /locus_tag="b1775" /gene_synonym="ECK1773" /gene_synonym="JW5290" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS sugar transporter, membrane protein" /protein_id="AAC74845.1" /db_xref="GI:1788074" /db_xref="ASAP:ABE-0005910" /db_xref="UniProtKB/Swiss-Prot:P76230" /db_xref="EcoGene:EG13487" /translation="MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGL ILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASM VVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEA EKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAM NVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVG LLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSG LANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVES LSIDAVANK" gene complement(1729777..1730853) /gene="ydjL" /locus_tag="b1776" /gene_synonym="ECK1774" /gene_synonym="JW1765" /db_xref="EcoGene:EG13488" CDS complement(1729777..1730853) /gene="ydjL" /locus_tag="b1776" /gene_synonym="ECK1774" /gene_synonym="JW1765" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC74846.1" /db_xref="GI:1788075" /db_xref="ASAP:ABE-0005912" /db_xref="UniProtKB/Swiss-Prot:P77539" /db_xref="EcoGene:EG13488" /translation="MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMK HYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGD FLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPIC NAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVA KELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRV GMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQ WREGFDAMVDKTAIKVIMTYDFDE" gene complement(1731223..1731495) /gene="yeaC" /locus_tag="b1777" /gene_synonym="ECK1775" /gene_synonym="JW1766" /db_xref="EcoGene:EG13489" CDS complement(1731223..1731495) /gene="yeaC" /locus_tag="b1777" /gene_synonym="ECK1775" /gene_synonym="JW1766" /codon_start=1 /transl_table=11 /product="DUF1315 family protein" /protein_id="AAC74847.2" /db_xref="GI:87081972" /db_xref="ASAP:ABE-0005914" /db_xref="UniProtKB/Swiss-Prot:P76231" /db_xref="EcoGene:EG13489" /translation="MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL VMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK" gene complement(1731537..1731950) /gene="msrB" /locus_tag="b1778" /gene_synonym="ECK1776" /gene_synonym="JW1767" /gene_synonym="yeaA" /db_xref="EcoGene:EG12394" CDS complement(1731537..1731950) /gene="msrB" /locus_tag="b1778" /gene_synonym="ECK1776" /gene_synonym="JW1767" /gene_synonym="yeaA" /EC_number="1.8.4.12" /codon_start=1 /transl_table=11 /product="methionine sulfoxide reductase B" /protein_id="AAC74848.1" /db_xref="GI:1788077" /db_xref="ASAP:ABE-0005916" /db_xref="UniProtKB/Swiss-Prot:P0A746" /db_xref="EcoGene:EG12394" /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY HCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING" gene 1732292..1733287 /gene="gapA" /locus_tag="b1779" /gene_synonym="ECK1777" /gene_synonym="JW1768" /db_xref="EcoGene:EG10367" CDS 1732292..1733287 /gene="gapA" /locus_tag="b1779" /gene_synonym="ECK1777" /gene_synonym="JW1768" /EC_number="1.2.1.12" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006096 - glycolysis; GO_process: GO:0008615 - pyridoxine biosynthetic process; GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase A" /protein_id="AAC74849.1" /db_xref="GI:1788079" /db_xref="ASAP:ABE-0005920" /db_xref="UniProtKB/Swiss-Prot:P0A9B2" /db_xref="EcoGene:EG10367" /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK" gene 1733371..1734255 /gene="yeaD" /locus_tag="b1780" /gene_synonym="ECK1778" /gene_synonym="JW1769" /gene_synonym="yzzQ" /db_xref="EcoGene:EG12679" CDS 1733371..1734255 /gene="yeaD" /locus_tag="b1780" /gene_synonym="ECK1778" /gene_synonym="JW1769" /gene_synonym="yzzQ" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /codon_start=1 /transl_table=11 /product="D-hexose-6-phosphate epimerase-like protein" /protein_id="AAC74850.2" /db_xref="GI:87081973" /db_xref="ASAP:ABE-0005923" /db_xref="UniProtKB/Swiss-Prot:P39173" /db_xref="EcoGene:EG12679" /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP WTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETT SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCS VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK VTKEKPAHLAQSIRVAKR" repeat_region 1734274..1734294 /note="REP133 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1734303..1735157) /gene="yeaE" /locus_tag="b1781" /gene_synonym="ECK1779" /gene_synonym="JW1770" /db_xref="EcoGene:EG13491" CDS complement(1734303..1735157) /gene="yeaE" /locus_tag="b1781" /gene_synonym="ECK1779" /gene_synonym="JW1770" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="putative an aldehyde reductase" /codon_start=1 /transl_table=11 /product="aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent" /protein_id="AAC74851.1" /db_xref="GI:1788081" /db_xref="ASAP:ABE-0005925" /db_xref="UniProtKB/Swiss-Prot:P76234" /db_xref="EcoGene:EG13491" /translation="MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIEL GLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRL NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA HNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELAMLDKAYPAPK GKTALDMV" gene complement(1735247..1735993) /gene="mipA" /locus_tag="b1782" /gene_synonym="ECK1780" /gene_synonym="JW1771" /gene_synonym="yeaF" /db_xref="EcoGene:EG13492" CDS complement(1735247..1735993) /gene="mipA" /locus_tag="b1782" /gene_synonym="ECK1780" /gene_synonym="JW1771" /gene_synonym="yeaF" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="scaffolding protein for murein synthesizing machinery" /protein_id="AAC74852.1" /db_xref="GI:1788082" /db_xref="ASAP:ABE-0005928" /db_xref="UniProtKB/Swiss-Prot:P0A908" /db_xref="EcoGene:EG13492" /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR YTRLSDEVTDSPMVDKSWTGLISTGITYKF" gene 1736429..1738363 /gene="yeaG" /locus_tag="b1783" /gene_synonym="ECK1781" /gene_synonym="JW1772" /db_xref="EcoGene:EG13493" CDS 1736429..1738363 /gene="yeaG" /locus_tag="b1783" /gene_synonym="ECK1781" /gene_synonym="JW1772" /codon_start=1 /transl_table=11 /product="protein kinase, endogenous substrate unidentified; autokinase" /protein_id="AAC74853.1" /db_xref="GI:1788083" /db_xref="ASAP:ABE-0005935" /db_xref="UniProtKB/Swiss-Prot:P0ACY3" /db_xref="EcoGene:EG13493" /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG YTRKQVRLLCEWYLRVRKSS" repeat_region 1738413..1738451 /note="REP134 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1738476..1739759 /gene="yeaH" /locus_tag="b1784" /gene_synonym="ECK1782" /gene_synonym="JW1773" /db_xref="EcoGene:EG13494" CDS 1738476..1739759 /gene="yeaH" /locus_tag="b1784" /gene_synonym="ECK1782" /gene_synonym="JW1773" /codon_start=1 /transl_table=11 /product="UPF0229 family protein" /protein_id="AAC74854.1" /db_xref="GI:1788084" /db_xref="ASAP:ABE-0005938" /db_xref="UniProtKB/Swiss-Prot:P76235" /db_xref="EcoGene:EG13494" /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVT DVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKG" gene 1739906..1741381 /gene="yeaI" /locus_tag="b1785" /gene_synonym="ECK1783" /gene_synonym="JW1774" /db_xref="EcoGene:EG13495" CDS 1739906..1741381 /gene="yeaI" /locus_tag="b1785" /gene_synonym="ECK1783" /gene_synonym="JW1774" /codon_start=1 /transl_table=11 /product="putative membrane-anchored diguanylate cyclase" /protein_id="AAC74855.1" /db_xref="GI:1788085" /db_xref="ASAP:ABE-0005941" /db_xref="UniProtKB/Swiss-Prot:P76236" /db_xref="EcoGene:EG13495" /translation="MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLF MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN ADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ QSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTI SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI" gene 1741562..1743052 /gene="yeaJ" /locus_tag="b1786" /gene_synonym="ECK1784" /gene_synonym="JW5291" /db_xref="EcoGene:EG13496" CDS 1741562..1743052 /gene="yeaJ" /locus_tag="b1786" /gene_synonym="ECK1784" /gene_synonym="JW5291" /codon_start=1 /transl_table=11 /product="putative diguanylate cyclase" /protein_id="AAC74856.2" /db_xref="GI:87081974" /db_xref="ASAP:ABE-0005943" /db_xref="UniProtKB/Swiss-Prot:P76237" /db_xref="EcoGene:EG13496" /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIII NQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHF RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS" gene 1743095..1743598 /gene="yeaK" /locus_tag="b1787" /gene_synonym="ECK1785" /gene_synonym="JW1776" /db_xref="EcoGene:EG13497" CDS 1743095..1743598 /gene="yeaK" /locus_tag="b1787" /gene_synonym="ECK1785" /gene_synonym="JW1776" /codon_start=1 /transl_table=11 /product="aminoacyl-tRNA editing domain protein" /protein_id="AAC74857.1" /db_xref="GI:1788087" /db_xref="ASAP:ABE-0005945" /db_xref="UniProtKB/Swiss-Prot:P64483" /db_xref="EcoGene:EG13497" /translation="MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRG TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPEL VNFRRTA" gene complement(1743599..1743703) /gene="yoaI" /locus_tag="b1788" /gene_synonym="ECK4472" /db_xref="EcoGene:EG14417" CDS complement(1743599..1743703) /gene="yoaI" /locus_tag="b1788" /gene_synonym="ECK4472" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74858.2" /db_xref="GI:87081975" /db_xref="ASAP:ABE-0005947" /db_xref="UniProtKB/Swiss-Prot:P76239" /db_xref="EcoGene:EG14417" /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG" gene 1743873..1744319 /gene="yeaL" /locus_tag="b1789" /gene_synonym="ECK1787" /gene_synonym="JW1778" /db_xref="EcoGene:EG13498" CDS 1743873..1744319 /gene="yeaL" /locus_tag="b1789" /gene_synonym="ECK1787" /gene_synonym="JW1778" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0756 family putative inner membrane protein" /protein_id="AAC74859.1" /db_xref="GI:1788090" /db_xref="ASAP:ABE-0005954" /db_xref="UniProtKB/Swiss-Prot:P0ACY6" /db_xref="EcoGene:EG13498" /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ" gene complement(1744276..1745097) /gene="yeaM" /locus_tag="b1790" /gene_synonym="ECK1788" /gene_synonym="JW1779" /db_xref="EcoGene:EG13499" CDS complement(1744276..1745097) /gene="yeaM" /locus_tag="b1790" /gene_synonym="ECK1788" /gene_synonym="JW1779" /function="putative regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74860.1" /db_xref="GI:1788091" /db_xref="ASAP:ABE-0005956" /db_xref="UniProtKB/Swiss-Prot:P76241" /db_xref="EcoGene:EG13499" /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ" gene 1745194..1746375 /gene="yeaN" /locus_tag="b1791" /gene_synonym="ECK1789" /gene_synonym="JW1780" /db_xref="EcoGene:EG13500" CDS 1745194..1746375 /gene="yeaN" /locus_tag="b1791" /gene_synonym="ECK1789" /gene_synonym="JW1780" /function="putative transport; Not classified" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042886 - amide transport" /codon_start=1 /transl_table=11 /product="putative MFS transporter, inner membrane protein" /protein_id="AAC74861.1" /db_xref="GI:1788092" /db_xref="ASAP:ABE-0005962" /db_xref="UniProtKB/Swiss-Prot:P76242" /db_xref="EcoGene:EG13500" /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL FLGINSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI R" gene 1746430..1746777 /gene="yeaO" /locus_tag="b1792" /gene_synonym="ECK1790" /gene_synonym="JW1781" /db_xref="EcoGene:EG13501" CDS 1746430..1746777 /gene="yeaO" /locus_tag="b1792" /gene_synonym="ECK1790" /gene_synonym="JW1781" /codon_start=1 /transl_table=11 /product="DUF488 family protein" /protein_id="AAC74862.2" /db_xref="GI:87081976" /db_xref="ASAP:ABE-0005964" /db_xref="UniProtKB/Swiss-Prot:P76243" /db_xref="EcoGene:EG13501" /translation="MNIQCKRVYDPAEQSDGYRILVDRLWPRGIKKTDLALDEWDKEI TPSTELRKAFHGEVVDYATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYSAKNTTQ NHALVLADWLRSL" gene complement(1746799..1747053) /gene="yoaF" /locus_tag="b1793" /gene_synonym="ECK1791" /gene_synonym="JW1782" /db_xref="EcoGene:EG14304" CDS complement(1746799..1747053) /gene="yoaF" /locus_tag="b1793" /gene_synonym="ECK1791" /gene_synonym="JW1782" /codon_start=1 /transl_table=11 /product="DUF333 family outer membrane lipoprotein" /protein_id="AAC74863.1" /db_xref="GI:1788094" /db_xref="ASAP:ABE-0005966" /db_xref="UniProtKB/Swiss-Prot:P64493" /db_xref="EcoGene:EG14304" /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK GGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK" gene 1747236..1748261 /gene="yeaP" /locus_tag="b1794" /gene_synonym="ECK1792" /gene_synonym="JW5292" /db_xref="EcoGene:EG13502" CDS 1747236..1748261 /gene="yeaP" /locus_tag="b1794" /gene_synonym="ECK1792" /gene_synonym="JW5292" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="AAC74864.2" /db_xref="GI:87081977" /db_xref="ASAP:ABE-0005972" /db_xref="UniProtKB/Swiss-Prot:P76245" /db_xref="EcoGene:EG13502" /translation="MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKV DVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAAR NLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALV EQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKL INDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERI QQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFV AHPALHS" gene 1748294..1748392 /gene="yoaK" /locus_tag="b4676" /gene_synonym="ECK4491" /db_xref="EcoGene:EG14481" CDS 1748294..1748392 /gene="yoaK" /locus_tag="b4676" /gene_synonym="ECK4491" /codon_start=1 /transl_table=11 /product="inner membrane-associated protein" /protein_id="ACO59994.1" /db_xref="GI:226510949" /db_xref="UniProtKB/Swiss-Prot:C1P602" /db_xref="EcoGene:EG14481" /translation="MRIGIIFPVVIFITAVVFLAWFFIGGYAAPGA" gene 1748395..1748469 /gene="yoaJ" /locus_tag="b4675" /gene_synonym="ECK4490" /db_xref="EcoGene:EG14480" CDS 1748395..1748469 /gene="yoaJ" /locus_tag="b4675" /gene_synonym="ECK4490" /codon_start=1 /transl_table=11 /product="inner membrane-associated protein" /protein_id="ACO59995.1" /db_xref="GI:226510950" /db_xref="UniProtKB/Swiss-Prot:C1P603" /db_xref="EcoGene:EG14480" /translation="MKKTTIIMMGVAIIVVLGTELGWW" gene complement(1748528..1748776) /gene="yeaQ" /locus_tag="b1795" /gene_synonym="ECK1793" /gene_synonym="JW1784" /db_xref="EcoGene:EG13503" CDS complement(1748528..1748776) /gene="yeaQ" /locus_tag="b1795" /gene_synonym="ECK1793" /gene_synonym="JW1784" /codon_start=1 /transl_table=11 /product="UPF0410 family protein" /protein_id="AAC74865.1" /db_xref="GI:1788096" /db_xref="ASAP:ABE-0005974" /db_xref="UniProtKB/Swiss-Prot:P64485" /db_xref="EcoGene:EG13503" /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS" gene complement(1748924..1749106) /gene="yoaG" /locus_tag="b1796" /gene_synonym="ECK1794" /gene_synonym="JW1785" /db_xref="EcoGene:EG14305" CDS complement(1748924..1749106) /gene="yoaG" /locus_tag="b1796" /gene_synonym="ECK1794" /gene_synonym="JW1785" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74866.1" /db_xref="GI:1788097" /db_xref="ASAP:ABE-0005976" /db_xref="UniProtKB/Swiss-Prot:P64496" /db_xref="EcoGene:EG14305" /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN TVRSYDTENEHDVCGW" gene complement(1749110..1749469) /gene="yeaR" /locus_tag="b1797" /gene_synonym="ECK1795" /gene_synonym="JW1786" /db_xref="EcoGene:EG13504" CDS complement(1749110..1749469) /gene="yeaR" /locus_tag="b1797" /gene_synonym="ECK1795" /gene_synonym="JW1786" /note="GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="DUF1971 family protein, nitrate-inducible" /protein_id="AAC74867.1" /db_xref="GI:1788098" /db_xref="ASAP:ABE-0005979" /db_xref="UniProtKB/Swiss-Prot:P64488" /db_xref="EcoGene:EG13504" /translation="MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLS VMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAP EVLMEGAQQRKVIHNGK" gene complement(1749642..1750280) /gene="leuE" /locus_tag="b1798" /gene_synonym="ECK1796" /gene_synonym="JW1787" /gene_synonym="yeaS" /db_xref="EcoGene:EG13505" CDS complement(1749642..1750280) /gene="leuE" /locus_tag="b1798" /gene_synonym="ECK1796" /gene_synonym="JW1787" /gene_synonym="yeaS" /codon_start=1 /transl_table=11 /product="leucine efflux protein" /protein_id="AAC74868.1" /db_xref="GI:1788099" /db_xref="ASAP:ABE-0005984" /db_xref="UniProtKB/Swiss-Prot:P76249" /db_xref="EcoGene:EG13505" /translation="MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGY LAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGK NSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILAATL ELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS" gene complement(1750407..1751330) /gene="dmlR" /locus_tag="b1799" /gene_synonym="ECK1797" /gene_synonym="JW1788" /gene_synonym="yeaT" /db_xref="EcoGene:EG13506" CDS complement(1750407..1751330) /gene="dmlR" /locus_tag="b1799" /gene_synonym="ECK1797" /gene_synonym="JW1788" /gene_synonym="yeaT" /function="regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of dmlA" /protein_id="AAC74869.2" /db_xref="GI:87081978" /db_xref="ASAP:ABE-0005987" /db_xref="UniProtKB/Swiss-Prot:P76250" /db_xref="EcoGene:EG13506" /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS FGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKV TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS RLATSAKVRITVEFLRQYFAEHYPNFSLEHA" gene 1751433..1752518 /gene="dmlA" /locus_tag="b1800" /gene_synonym="ECK1798" /gene_synonym="JW1789" /gene_synonym="yeaU" /db_xref="EcoGene:EG13507" CDS 1751433..1752518 /gene="dmlA" /locus_tag="b1800" /gene_synonym="ECK1798" /gene_synonym="JW1789" /gene_synonym="yeaU" /function="enzyme; Not classified" /note="putative tartrate dehydrogenase; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase" /protein_id="AAC74870.1" /db_xref="GI:1788101" /db_xref="ASAP:ABE-0005991" /db_xref="UniProtKB/Swiss-Prot:P76251" /db_xref="EcoGene:EG13507" /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQME WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ YVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES VFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRW DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA HGPKTPDMKGNATTPQVADAICKIILR" gene 1752709..1754154 /gene="yeaV" /locus_tag="b1801" /gene_synonym="ECK1799" /gene_synonym="JW5293" /db_xref="EcoGene:EG13508" CDS 1752709..1754154 /gene="yeaV" /locus_tag="b1801" /gene_synonym="ECK1799" /gene_synonym="JW5293" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC74871.1" /db_xref="GI:1788102" /db_xref="ASAP:ABE-0005995" /db_xref="UniProtKB/Swiss-Prot:P0ABD1" /db_xref="EcoGene:EG13508" /translation="MVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLG SSTLYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAY HFHVRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRG LSALTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIV GPTEFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMF VTRVSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGET AVQQVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRL FWCVVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPA HQVEHYLPQTPVEALEKTPVLPAGTVFKGDN" gene 1754186..1755310 /gene="yeaW" /locus_tag="b1802" /gene_synonym="ECK1800" /gene_synonym="JW5294" /db_xref="EcoGene:EG13509" CDS 1754186..1755310 /gene="yeaW" /locus_tag="b1802" /gene_synonym="ECK1800" /gene_synonym="JW5294" /codon_start=1 /transl_table=11 /product="putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster" /protein_id="AAC74872.1" /db_xref="GI:1788103" /db_xref="ASAP:ABE-0005997" /db_xref="UniProtKB/Swiss-Prot:P0ABR7" /db_xref="EcoGene:EG13509" /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPG FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD" gene 1755366..1756331 /gene="yeaX" /locus_tag="b1803" /gene_synonym="ECK1801" /gene_synonym="JW1792" /db_xref="EcoGene:EG13510" CDS 1755366..1756331 /gene="yeaX" /locus_tag="b1803" /gene_synonym="ECK1801" /gene_synonym="JW1792" /function="putative enzyme; Not classified" /note="putative diogenase beta subunit" /codon_start=1 /transl_table=11 /product="putative YeaWX dioxygenase beta subunit, reductase component" /protein_id="AAC74873.1" /db_xref="GI:1788104" /db_xref="ASAP:ABE-0006000" /db_xref="UniProtKB/Swiss-Prot:P76254" /db_xref="EcoGene:EG13510" /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTP NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAAD TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL" gene complement(1756385..1757512) /gene="rnd" /locus_tag="b1804" /gene_synonym="ECK1802" /gene_synonym="JW1793" /db_xref="EcoGene:EG10858" CDS complement(1756385..1757512) /gene="rnd" /locus_tag="b1804" /gene_synonym="ECK1802" /gene_synonym="JW1793" /EC_number="3.1.26.3" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 3041371" /note="RNase D, processes tRNA precursor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ribonuclease D" /protein_id="AAC74874.1" /db_xref="GI:1788105" /db_xref="ASAP:ABE-0006003" /db_xref="UniProtKB/Swiss-Prot:P09155" /db_xref="EcoGene:EG10858" /translation="MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLI QLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLID TQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLL PITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQ LLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLL ALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQI NQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ" gene complement(1757582..1759267) /gene="fadD" /locus_tag="b1805" /gene_synonym="ECK1803" /gene_synonym="JW1794" /gene_synonym="oldD" /db_xref="EcoGene:EG11530" CDS complement(1757582..1759267) /gene="fadD" /locus_tag="b1805" /gene_synonym="ECK1803" /gene_synonym="JW1794" /gene_synonym="oldD" /EC_number="6.2.1.3" /function="enzyme; Degradation of small molecules: Fatty acids" /experiment="N-terminus verified by Edman degradation: PMID 1460045" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)" /protein_id="AAC74875.1" /db_xref="GI:1788107" /db_xref="ASAP:ABE-0006005" /db_xref="UniProtKB/Swiss-Prot:P69451" /db_xref="EcoGene:EG11530" /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN MGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV NVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA" gene complement(1759472..1760053) /gene="yeaY" /locus_tag="b1806" /gene_synonym="ECK1804" /gene_synonym="JW1795" /db_xref="EcoGene:EG13511" CDS complement(1759472..1760053) /gene="yeaY" /locus_tag="b1806" /gene_synonym="ECK1804" /gene_synonym="JW1795" /function="membrane; Not classified" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="Slp family lipoprotein, RpoE-regulated" /protein_id="AAC74876.1" /db_xref="GI:1788108" /db_xref="ASAP:ABE-0006011" /db_xref="UniProtKB/Swiss-Prot:P0AA91" /db_xref="EcoGene:EG13511" /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRV MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE" gene complement(1760093..1760788) /gene="tsaB" /locus_tag="b1807" /gene_synonym="ECK1805" /gene_synonym="JW1796" /gene_synonym="rpf" /gene_synonym="yeaZ" /db_xref="EcoGene:EG13512" CDS complement(1760093..1760788) /gene="tsaB" /locus_tag="b1807" /gene_synonym="ECK1805" /gene_synonym="JW1796" /gene_synonym="rpf" /gene_synonym="yeaZ" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD" /protein_id="AAC74877.1" /db_xref="GI:1788109" /db_xref="ASAP:ABE-0006013" /db_xref="UniProtKB/Swiss-Prot:P76256" /db_xref="EcoGene:EG13512" /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPEIVHERMQQLSGEW VTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYL RNNVAWKKLPGKE" gene complement(1760846..1762756) /gene="yoaA" /locus_tag="b1808" /gene_synonym="ECK1806" /gene_synonym="JW1797" /db_xref="EcoGene:EG13513" CDS complement(1760846..1762756) /gene="yoaA" /locus_tag="b1808" /gene_synonym="ECK1806" /gene_synonym="JW1797" /function="putative enzyme; Not classified" /note="putative enzyme; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ATP-dependent helicase, DinG family" /protein_id="AAC74878.1" /db_xref="GI:1788110" /db_xref="ASAP:ABE-0006016" /db_xref="UniProtKB/Swiss-Prot:P76257" /db_xref="EcoGene:EG13513" /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVLRNLPQTNQPGSAR QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA RAVRFLAIPSSR" gene 1762888..1763232 /gene="yoaB" /locus_tag="b1809" /gene_synonym="ECK1807" /gene_synonym="JW5295" /db_xref="EcoGene:EG13514" CDS 1762888..1763232 /gene="yoaB" /locus_tag="b1809" /gene_synonym="ECK1807" /gene_synonym="JW5295" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative reactive intermediate deaminase" /protein_id="AAC74879.2" /db_xref="GI:87081979" /db_xref="ASAP:ABE-0006020" /db_xref="UniProtKB/Swiss-Prot:P0AEB7" /db_xref="EcoGene:EG13514" /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP KYKVEIKIVAAV" gene 1763654..1763953 /gene="yoaC" /locus_tag="b1810" /gene_synonym="ECK1808" /gene_synonym="JW5296" /db_xref="EcoGene:EG13515" CDS 1763654..1763953 /gene="yoaC" /locus_tag="b1810" /gene_synonym="ECK1808" /gene_synonym="JW5296" /codon_start=1 /transl_table=11 /product="DUF1889 family protein" /protein_id="AAC74880.2" /db_xref="GI:226510951" /db_xref="ASAP:ABE-0006024" /db_xref="UniProtKB/Swiss-Prot:P64490" /db_xref="EcoGene:EG13515" /translation="MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPA SAADITARADQEGWNPGFTEKMVGWAKKMETGERSVIKNPEYFSTYMQEELKALV" gene complement(1764073..1764252) /gene="yoaH" /locus_tag="b1811" /gene_synonym="ECK1809" /gene_synonym="JW1800" /db_xref="EcoGene:EG14306" CDS complement(1764073..1764252) /gene="yoaH" /locus_tag="b1811" /gene_synonym="ECK1809" /gene_synonym="JW1800" /codon_start=1 /transl_table=11 /product="UPF0181 family protein" /protein_id="AAC74881.1" /db_xref="GI:1788113" /db_xref="ASAP:ABE-0006026" /db_xref="UniProtKB/Swiss-Prot:P67338" /db_xref="EcoGene:EG14306" /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN HSGERIVARFEDEDE" gene 1764326..1765687 /gene="pabB" /locus_tag="b1812" /gene_synonym="ECK1810" /gene_synonym="JW1801" /db_xref="EcoGene:EG10683" CDS 1764326..1765687 /gene="pabB" /locus_tag="b1812" /gene_synonym="ECK1810" /gene_synonym="JW1801" /EC_number="2.6.1.85" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="p-aminobenzoate synthetase, component I; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="aminodeoxychorismate synthase, subunit I" /protein_id="AAC74882.1" /db_xref="GI:1788114" /db_xref="ASAP:ABE-0006031" /db_xref="UniProtKB/Swiss-Prot:P05041" /db_xref="EcoGene:EG10683" /translation="MKTLSPAVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT LPRLPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF PAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG SIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQ LEK" gene 1765691..1766269 /gene="nudL" /locus_tag="b1813" /gene_synonym="ECK1811" /gene_synonym="JW1802" /gene_synonym="yeaB" /db_xref="EcoGene:EG12693" CDS 1765691..1766269 /gene="nudL" /locus_tag="b1813" /gene_synonym="ECK1811" /gene_synonym="JW1802" /gene_synonym="yeaB" /codon_start=1 /transl_table=11 /product="putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase" /protein_id="AAC74883.1" /db_xref="GI:1788115" /db_xref="ASAP:ABE-0006035" /db_xref="UniProtKB/Swiss-Prot:P43337" /db_xref="EcoGene:EG12693" /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASAIAAALREAEEEVAIPPSAVEVIGVLP PVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP" gene 1766453..1767817 /gene="sdaA" /locus_tag="b1814" /gene_synonym="ECK1812" /gene_synonym="JW1803" /db_xref="EcoGene:EG10930" CDS 1766453..1767817 /gene="sdaA" /locus_tag="b1814" /gene_synonym="ECK1812" /gene_synonym="JW1803" /EC_number="4.3.1.17" /function="enzyme; Degradation of small molecules: Amino acids" /experiment="N-terminus verified by Edman degradation: PMID 8436113" /note="L-serine deaminase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="L-serine dehydratase 1" /protein_id="AAC74884.1" /db_xref="GI:1788116" /db_xref="ASAP:ABE-0006039" /db_xref="UniProtKB/Swiss-Prot:P16095" /db_xref="EcoGene:EG10930" /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK VQCD" gene 1767948..1769546 /gene="yoaD" /locus_tag="b1815" /gene_synonym="adrB" /gene_synonym="ECK1813" /gene_synonym="JW1804" /db_xref="EcoGene:EG13516" CDS 1767948..1769546 /gene="yoaD" /locus_tag="b1815" /gene_synonym="adrB" /gene_synonym="ECK1813" /gene_synonym="JW1804" /codon_start=1 /transl_table=11 /product="putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production" /protein_id="AAC74885.2" /db_xref="GI:87081980" /db_xref="ASAP:ABE-0006043" /db_xref="UniProtKB/Swiss-Prot:P76261" /db_xref="EcoGene:EG13516" /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN AGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLG LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR YVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITE RDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFP KWLAGSQPPPARHNGHITPIMPLR" gene complement(1769550..1771106) /gene="yoaE" /locus_tag="b1816" /gene_synonym="borG" /gene_synonym="ECK1814" /gene_synonym="JW1805" /db_xref="EcoGene:EG13517" CDS complement(1769550..1771106) /gene="yoaE" /locus_tag="b1816" /gene_synonym="borG" /gene_synonym="ECK1814" /gene_synonym="JW1805" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative membrane protein/conserved protein" /protein_id="AAC74886.1" /db_xref="GI:1788119" /db_xref="ASAP:ABE-0006045" /db_xref="UniProtKB/Swiss-Prot:P0AEC0" /db_xref="EcoGene:EG13517" /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPI PEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLF PVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRAR GSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQ QALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIV KEQPAHDEDE" gene 1771569..1772540 /gene="manX" /locus_tag="b1817" /gene_synonym="ECK1815" /gene_synonym="gptB" /gene_synonym="JW1806" /gene_synonym="mpt" /gene_synonym="ptsL" /gene_synonym="ptsX" /db_xref="EcoGene:EG10567" CDS 1771569..1772540 /gene="manX" /locus_tag="b1817" /gene_synonym="ECK1815" /gene_synonym="gptB" /gene_synonym="JW1806" /gene_synonym="mpt" /gene_synonym="ptsL" /gene_synonym="ptsX" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS enzyme IIAB, mannose-specific; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="fused mannose-specific PTS enzymes: IIA component/IIB component" /protein_id="AAC74887.1" /db_xref="GI:1788120" /db_xref="ASAP:ABE-0006054" /db_xref="UniProtKB/Swiss-Prot:P69797" /db_xref="EcoGene:EG10567" /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK" gene 1772603..1773403 /gene="manY" /locus_tag="b1818" /gene_synonym="ECK1816" /gene_synonym="JW1807" /gene_synonym="pel" /gene_synonym="ptsP" /gene_synonym="ptsX" /db_xref="EcoGene:EG10568" CDS 1772603..1773403 /gene="manY" /locus_tag="b1818" /gene_synonym="ECK1816" /gene_synonym="JW1807" /gene_synonym="pel" /gene_synonym="ptsP" /gene_synonym="ptsX" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS enzyme IIC, mannose-specific; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="mannose-specific enzyme IIC component of PTS" /protein_id="AAC74888.1" /db_xref="GI:1788121" /db_xref="ASAP:ABE-0006056" /db_xref="UniProtKB/Swiss-Prot:P69801" /db_xref="EcoGene:EG10568" /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD" gene 1773416..1774267 /gene="manZ" /locus_tag="b1819" /gene_synonym="ECK1817" /gene_synonym="gptB" /gene_synonym="JW1808" /gene_synonym="mpt" /gene_synonym="ptsM" /gene_synonym="ptsX" /db_xref="EcoGene:EG10569" CDS 1773416..1774267 /gene="manZ" /locus_tag="b1819" /gene_synonym="ECK1817" /gene_synonym="gptB" /gene_synonym="JW1808" /gene_synonym="mpt" /gene_synonym="ptsM" /gene_synonym="ptsX" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS enzyme IID, mannose-specific; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="mannose-specific enzyme IID component of PTS" /protein_id="AAC74889.2" /db_xref="GI:345297175" /db_xref="ASAP:ABE-0006058" /db_xref="UniProtKB/Swiss-Prot:P69805" /db_xref="EcoGene:EG10569" /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY ACGLLGL" gene 1774322..1774780 /gene="yobD" /locus_tag="b1820" /gene_synonym="ECK1818" /gene_synonym="JW1809" /db_xref="EcoGene:EG13948" CDS 1774322..1774780 /gene="yobD" /locus_tag="b1820" /gene_synonym="ECK1818" /gene_synonym="JW1809" /codon_start=1 /transl_table=11 /product="UPF0266 family inner membrane protein" /protein_id="AAC74890.1" /db_xref="GI:1788123" /db_xref="ASAP:ABE-0006062" /db_xref="UniProtKB/Swiss-Prot:P67601" /db_xref="EcoGene:EG13948" /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ" gene 1775209..1775775 /gene="mntP" /locus_tag="b1821" /gene_synonym="ECK1819" /gene_synonym="JW5830" /gene_synonym="yebN" /db_xref="EcoGene:EG14012" CDS 1775209..1775775 /gene="mntP" /locus_tag="b1821" /gene_synonym="ECK1819" /gene_synonym="JW5830" /gene_synonym="yebN" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="putative Mn(2+) efflux pump, mntR-regulated" /protein_id="AAC74891.2" /db_xref="GI:87081981" /db_xref="ASAP:ABE-0006065" /db_xref="UniProtKB/Swiss-Prot:P76264" /db_xref="EcoGene:EG14012" /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS IIGKKAEILGGLVLIGIGVQILWTHFHG" gene complement(1775772..1776581) /gene="rlmA" /locus_tag="b1822" /gene_synonym="ECK1820" /gene_synonym="JW1811" /gene_synonym="rrmA" /gene_synonym="yebH" /db_xref="EcoGene:EG12207" CDS complement(1775772..1776581) /gene="rlmA" /locus_tag="b1822" /gene_synonym="ECK1820" /gene_synonym="JW1811" /gene_synonym="rrmA" /gene_synonym="yebH" /EC_number="2.1.1.187" /function="enzyme; rRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(1)G745 methyltransferase, SAM-dependent" /protein_id="AAC74892.1" /db_xref="GI:1788125" /db_xref="ASAP:ABE-0006067" /db_xref="UniProtKB/Swiss-Prot:P36999" /db_xref="EcoGene:EG12207" /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY" gene complement(1776747..1776956) /gene="cspC" /locus_tag="b1823" /gene_synonym="ECK1821" /gene_synonym="JW1812" /gene_synonym="msmB" /db_xref="EcoGene:EG12204" CDS complement(1776747..1776956) /gene="cspC" /locus_tag="b1823" /gene_synonym="ECK1821" /gene_synonym="JW1812" /gene_synonym="msmB" /function="phenotype; Not classified" /note="cold shock protein; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="stress protein, member of the CspA-family" /protein_id="AAC74893.1" /db_xref="GI:1788126" /db_xref="ASAP:ABE-0006070" /db_xref="UniProtKB/Swiss-Prot:P0A9Y6" /db_xref="EcoGene:EG12204" /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL AEGQNVEFEIQDGQKGPAAVNVTAI" gene complement(1776969..1777112) /gene="yobF" /locus_tag="b1824" /gene_synonym="ECK1822" /gene_synonym="JW1813" /db_xref="EcoGene:EG14382" CDS complement(1776969..1777112) /gene="yobF" /locus_tag="b1824" /gene_synonym="ECK1822" /gene_synonym="JW1813" /codon_start=1 /transl_table=11 /product="DUF2527 family heat-induced protein" /protein_id="AAC74894.1" /db_xref="GI:1788127" /db_xref="ASAP:ABE-0006072" /db_xref="UniProtKB/Swiss-Prot:P64508" /db_xref="EcoGene:EG14382" /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK KTI" gene complement(1777782..1778069) /gene="yebO" /locus_tag="b1825" /gene_synonym="ECK1823" /gene_synonym="JW1814" /db_xref="EcoGene:EG14014" CDS complement(1777782..1778069) /gene="yebO" /locus_tag="b1825" /gene_synonym="ECK1823" /gene_synonym="JW1814" /codon_start=1 /transl_table=11 /product="putative inner membrane protein" /protein_id="AAC74895.1" /db_xref="GI:1788128" /db_xref="ASAP:ABE-0006075" /db_xref="UniProtKB/Swiss-Prot:P64499" /db_xref="EcoGene:EG14014" /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE LLEALLDQQKRQNALLRRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER" gene complement(1778144..1778287) /gene="mgrB" /locus_tag="b1826" /gene_synonym="ECK1824" /gene_synonym="JW1815" /gene_synonym="yobG" /db_xref="EcoGene:EG14383" CDS complement(1778144..1778287) /gene="mgrB" /locus_tag="b1826" /gene_synonym="ECK1824" /gene_synonym="JW1815" /gene_synonym="yobG" /function="regulator; Not classified" /codon_start=1 /transl_table=11 /product="regulatory peptide for PhoPQ, feedback inhibition" /protein_id="AAC74896.1" /db_xref="GI:1788130" /db_xref="ASAP:ABE-0006078" /db_xref="UniProtKB/Swiss-Prot:P64512" /db_xref="EcoGene:EG14383" /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF IPW" gene 1778446..1778685 /gene="yobH" /locus_tag="b4536" /gene_synonym="ECK1825" /gene_synonym="JW5298" /db_xref="EcoGene:EG14424" CDS 1778446..1778685 /gene="yobH" /locus_tag="b4536" /gene_synonym="ECK1825" /gene_synonym="JW5298" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18672.1" /db_xref="GI:87081982" /db_xref="ASAP:ABE-0285057" /db_xref="UniProtKB/Swiss-Prot:Q2MB16" /db_xref="EcoGene:EG14424" /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG" gene complement(1778829..1779620) /gene="kdgR" /locus_tag="b1827" /gene_synonym="ECK1826" /gene_synonym="JW1816" /gene_synonym="yebP" /db_xref="EcoGene:EG14018" CDS complement(1778829..1779620) /gene="kdgR" /locus_tag="b1827" /gene_synonym="ECK1826" /gene_synonym="JW1816" /gene_synonym="yebP" /function="regulator; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="KDG regulon transcriptional repressor" /protein_id="AAC74897.1" /db_xref="GI:1788131" /db_xref="ASAP:ABE-0006081" /db_xref="UniProtKB/Swiss-Prot:P76268" /db_xref="EcoGene:EG14018" /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSR LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF" gene 1779797..1781170 /gene="yebQ" /locus_tag="b1828" /gene_synonym="ECK1827" /gene_synonym="JW5299" /db_xref="EcoGene:EG14019" CDS 1779797..1781170 /gene="yebQ" /locus_tag="b1828" /gene_synonym="ECK1827" /gene_synonym="JW5299" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC74898.2" /db_xref="GI:87081983" /db_xref="ASAP:ABE-0006085" /db_xref="UniProtKB/Swiss-Prot:P76269" /db_xref="EcoGene:EG14019" /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI TQPRSRA" gene complement(1781216..1782097) /gene="htpX" /locus_tag="b1829" /gene_synonym="ECK1828" /gene_synonym="JW1818" /db_xref="EcoGene:EG10462" CDS complement(1781216..1782097) /gene="htpX" /locus_tag="b1829" /gene_synonym="ECK1828" /gene_synonym="JW1818" /function="orf; Adaptations, atypical conditions" /note="heat shock protein, integral membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="putative endopeptidase" /protein_id="AAC74899.1" /db_xref="GI:1788133" /db_xref="ASAP:ABE-0006087" /db_xref="UniProtKB/Swiss-Prot:P23894" /db_xref="EcoGene:EG10462" /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMALCINGKSKSLSELFMTH PPLDKRIEALRTGEYLK" gene complement(1782289..1784337) /gene="prc" /locus_tag="b1830" /gene_synonym="ECK1829" /gene_synonym="JW1819" /gene_synonym="tsp" /db_xref="EcoGene:EG10760" CDS complement(1782289..1784337) /gene="prc" /locus_tag="b1830" /gene_synonym="ECK1829" /gene_synonym="JW1819" /gene_synonym="tsp" /EC_number="3.4.21.102" /function="enzyme; Degradation of proteins, peptides, glyco" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0006457 - protein folding; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="carboxy-terminal protease for penicillin-binding protein 3" /protein_id="AAC74900.1" /db_xref="GI:1788134" /db_xref="ASAP:ABE-0006090" /db_xref="UniProtKB/Swiss-Prot:P23865" /db_xref="EcoGene:EG10760" /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA ELNALWDSKVKFDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA FEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK " gene complement(1784357..1785055) /gene="proQ" /locus_tag="b1831" /gene_synonym="ECK1830" /gene_synonym="JW5300" /gene_synonym="yebJ" /gene_synonym="yobE" /gene_synonym="yoeC" /db_xref="EcoGene:EG12866" CDS complement(1784357..1785055) /gene="proQ" /locus_tag="b1831" /gene_synonym="ECK1830" /gene_synonym="JW5300" /gene_synonym="yebJ" /gene_synonym="yobE" /gene_synonym="yoeC" /note="regulator of ProP; putative structural element which influences activation of ProP; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="RNA chaperone, putative ProP translation regulator" /protein_id="AAC74901.2" /db_xref="GI:48994892" /db_xref="ASAP:ABE-0006092" /db_xref="UniProtKB/Swiss-Prot:P45577" /db_xref="EcoGene:EG12866" /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ LEEAKARVQAQRAEQQAKKREAAATAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN SGMSLIVRAEHLVF" gene complement(1785152..1785649) /gene="msrC" /locus_tag="b1832" /gene_synonym="ECK1831" /gene_synonym="JW1821" /gene_synonym="yebR" /db_xref="EcoGene:EG14020" CDS complement(1785152..1785649) /gene="msrC" /locus_tag="b1832" /gene_synonym="ECK1831" /gene_synonym="JW1821" /gene_synonym="yebR" /codon_start=1 /transl_table=11 /product="free methionine-(R)-sulfoxide reductase" /protein_id="AAC74902.2" /db_xref="GI:171474009" /db_xref="ASAP:ABE-0006095" /db_xref="UniProtKB/Swiss-Prot:P76270" /db_xref="EcoGene:EG14020" /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINW AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDA ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF ASVAG" gene 1785779..1787062 /gene="yebS" /locus_tag="b1833" /gene_synonym="ECK1832" /gene_synonym="JW1822" /db_xref="EcoGene:EG14021" CDS 1785779..1787062 /gene="yebS" /locus_tag="b1833" /gene_synonym="ECK1832" /gene_synonym="JW1822" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane PqiA domain protein" /protein_id="AAC74903.1" /db_xref="GI:1788137" /db_xref="ASAP:ABE-0006098" /db_xref="UniProtKB/Swiss-Prot:P0AD03" /db_xref="EcoGene:EG14021" /translation="MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEIN SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV MQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLK EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFY PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD" gene 1787031..1789664 /gene="yebT" /locus_tag="b1834" /gene_synonym="ECK1833" /gene_synonym="JW1823" /db_xref="EcoGene:EG14022" CDS 1787031..1789664 /gene="yebT" /locus_tag="b1834" /gene_synonym="ECK1833" /gene_synonym="JW1823" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="MCE domain protein" /protein_id="AAC74904.2" /db_xref="GI:87081984" /db_xref="ASAP:ABE-0006101" /db_xref="UniProtKB/Swiss-Prot:P76272" /db_xref="EcoGene:EG14022" /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIASWLIWDSYQD RGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV LTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY ASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY PEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK HFLLQESEPKEWREWGTALPK" gene 1789744..1791183 /gene="rsmF" /locus_tag="b1835" /gene_synonym="ECK1834" /gene_synonym="JW5301" /gene_synonym="yebU" /db_xref="EcoGene:EG14023" CDS 1789744..1791183 /gene="rsmF" /locus_tag="b1835" /gene_synonym="ECK1834" /gene_synonym="JW5301" /gene_synonym="yebU" /function="enzyme; rRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA m(5)C1407 methyltransferase, SAM-dependent" /protein_id="AAC74905.2" /db_xref="GI:87081985" /db_xref="ASAP:ABE-0006106" /db_xref="UniProtKB/Swiss-Prot:P76273" /db_xref="EcoGene:EG14023" /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHA NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD REAGQIRQAATGVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHN KGYRWQHEAVIALASPDNMNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI GLAKRIGSRLKNSYPRELVRDGKLFTGNA" gene 1791301..1791537 /gene="yebV" /locus_tag="b1836" /gene_synonym="ECK1835" /gene_synonym="JW5302" /db_xref="EcoGene:EG14024" CDS 1791301..1791537 /gene="yebV" /locus_tag="b1836" /gene_synonym="ECK1835" /gene_synonym="JW5302" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74906.2" /db_xref="GI:87081986" /db_xref="ASAP:ABE-0006110" /db_xref="UniProtKB/Swiss-Prot:P64503" /db_xref="EcoGene:EG14024" /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA" gene 1791642..1791833 /gene="yebW" /locus_tag="b1837" /gene_synonym="ECK1836" /gene_synonym="JW5303" /db_xref="EcoGene:EG14025" CDS 1791642..1791833 /gene="yebW" /locus_tag="b1837" /gene_synonym="ECK1836" /gene_synonym="JW5303" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74907.2" /db_xref="GI:87081987" /db_xref="ASAP:ABE-0006112" /db_xref="UniProtKB/Swiss-Prot:P76275" /db_xref="EcoGene:EG14025" /translation="MFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRQGGCF PIEDFIDGFWRPAQEYGDF" gene complement(1791834..1792490) /gene="pphA" /locus_tag="b1838" /gene_synonym="ECK1837" /gene_synonym="JW1827" /gene_synonym="prpA" /gene_synonym="yebX" /db_xref="EcoGene:EG14026" CDS complement(1791834..1792490) /gene="pphA" /locus_tag="b1838" /gene_synonym="ECK1837" /gene_synonym="JW1827" /gene_synonym="prpA" /gene_synonym="yebX" /EC_number="3.1.3.16" /function="regulator; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="serine/threonine-specific protein phosphatase 1" /protein_id="AAC74908.2" /db_xref="GI:87081988" /db_xref="ASAP:ABE-0006114" /db_xref="UniProtKB/Swiss-Prot:P55798" /db_xref="EcoGene:EG14026" /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ " gene 1792587..1792835 /gene="ryeA" /locus_tag="b4432" /gene_synonym="ECK1838" /gene_synonym="IS091" /gene_synonym="JWR0237" /gene_synonym="psrA8" /gene_synonym="sraC" /gene_synonym="tpke79" /db_xref="EcoGene:EG31146" ncRNA 1792587..1792835 /ncRNA_class="other" /gene="ryeA" /locus_tag="b4432" /gene_synonym="ECK1838" /gene_synonym="IS091" /gene_synonym="JWR0237" /gene_synonym="psrA8" /gene_synonym="sraC" /gene_synonym="tpke79" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047252" /db_xref="EcoGene:EG31146" gene complement(1792685..1792805) /gene="sdsR" /locus_tag="b4433" /gene_synonym="ECK1839" /gene_synonym="JWR0238" /gene_synonym="ryeB" /gene_synonym="tpke79" /db_xref="EcoGene:EG31147" ncRNA complement(1792685..1792805) /ncRNA_class="other" /gene="sdsR" /locus_tag="b4433" /gene_synonym="ECK1839" /gene_synonym="JWR0238" /gene_synonym="ryeB" /gene_synonym="tpke79" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047253" /db_xref="EcoGene:EG31147" gene complement(1792886..1793227) /gene="yebY" /locus_tag="b1839" /gene_synonym="ECK1840" /gene_synonym="JW1828" /db_xref="EcoGene:EG14027" CDS complement(1792886..1793227) /gene="yebY" /locus_tag="b1839" /gene_synonym="ECK1840" /gene_synonym="JW1828" /codon_start=1 /transl_table=11 /product="DUF2511 family protein" /protein_id="AAC74909.1" /db_xref="GI:1788144" /db_xref="ASAP:ABE-0006118" /db_xref="UniProtKB/Swiss-Prot:P64506" /db_xref="EcoGene:EG14027" /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL APFIERAEKLC" gene complement(1793240..1794112) /gene="yebZ" /locus_tag="b1840" /gene_synonym="ECK1841" /gene_synonym="JW1829" /db_xref="EcoGene:EG14028" CDS complement(1793240..1794112) /gene="yebZ" /locus_tag="b1840" /gene_synonym="ECK1841" /gene_synonym="JW1829" /function="putative transport; Drug/analog sensitivity" /note="putative resistance protein; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC74910.1" /db_xref="GI:1788145" /db_xref="ASAP:ABE-0006120" /db_xref="UniProtKB/Swiss-Prot:P76278" /db_xref="EcoGene:EG14028" /translation="MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFL RLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLAL VTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAA WFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPT LTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAV VLVIISLLATLEPF" gene complement(1794116..1794490) /gene="yobA" /locus_tag="b1841" /gene_synonym="ECK1842" /gene_synonym="JW1830" /db_xref="EcoGene:EG14029" CDS complement(1794116..1794490) /gene="yobA" /locus_tag="b1841" /gene_synonym="ECK1842" /gene_synonym="JW1830" /codon_start=1 /transl_table=11 /product="CopC family protein" /protein_id="AAC74911.1" /db_xref="GI:1788146" /db_xref="ASAP:ABE-0006123" /db_xref="UniProtKB/Swiss-Prot:P0AA57" /db_xref="EcoGene:EG14029" /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT VDWHVVSVDGHKTKGHYTFSVK" gene 1794629..1794859 /gene="holE" /locus_tag="b1842" /gene_synonym="ECK1843" /gene_synonym="JW1831" /db_xref="EcoGene:EG11505" CDS 1794629..1794859 /gene="holE" /locus_tag="b1842" /gene_synonym="ECK1843" /gene_synonym="JW1831" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 8246893,8505306" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III, theta subunit" /protein_id="AAC74912.1" /db_xref="GI:1788147" /db_xref="ASAP:ABE-0006126" /db_xref="UniProtKB/Swiss-Prot:P0ABS8" /db_xref="EcoGene:EG11505" /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ PEHLRSWFRERLIAHRLASVNLSRLPYEPKLK" gene 1794961..1795617 /gene="yobB" /locus_tag="b1843" /gene_synonym="ECK1844" /gene_synonym="JW1832" /db_xref="EcoGene:EG14030" CDS 1794961..1795617 /gene="yobB" /locus_tag="b1843" /gene_synonym="ECK1844" /gene_synonym="JW1832" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="C-N hydrolase family protein" /protein_id="AAC74913.1" /db_xref="GI:1788148" /db_xref="ASAP:ABE-0006129" /db_xref="UniProtKB/Swiss-Prot:P76280" /db_xref="EcoGene:EG14030" /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS LSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR " gene 1795641..1796303 /gene="exoX" /locus_tag="b1844" /gene_synonym="ECK1845" /gene_synonym="JW1833" /gene_synonym="yobC" /db_xref="EcoGene:EG14031" CDS 1795641..1796303 /gene="exoX" /locus_tag="b1844" /gene_synonym="ECK1845" /gene_synonym="JW1833" /gene_synonym="yobC" /EC_number="3.1.11.-" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease 10; DNA exonuclease X" /protein_id="AAC74914.1" /db_xref="GI:1788149" /db_xref="ASAP:ABE-0006131" /db_xref="UniProtKB/Swiss-Prot:P0AEK0" /db_xref="EcoGene:EG14031" /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLE NT" gene complement(1796300..1798360) /gene="ptrB" /locus_tag="b1845" /gene_synonym="ECK1846" /gene_synonym="JW1834" /gene_synonym="opdB" /gene_synonym="tlp" /db_xref="EcoGene:EG11004" CDS complement(1796300..1798360) /gene="ptrB" /locus_tag="b1845" /gene_synonym="ECK1846" /gene_synonym="JW1834" /gene_synonym="opdB" /gene_synonym="tlp" /EC_number="3.4.21.83" /function="enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 1769955" /codon_start=1 /transl_table=11 /product="protease II" /protein_id="AAC74915.1" /db_xref="GI:1788150" /db_xref="ASAP:ABE-0006133" /db_xref="UniProtKB/Swiss-Prot:P24555" /db_xref="EcoGene:EG11004" /translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQEN SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL ETGNWYPELLDNVEPSFVWANDSWIFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYE EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD HYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQ RGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETARLRYGYSSMTTPDTLFELD MDTGERRVLKQTEVPGFYAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVY GYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDY LDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML DESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWE PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQGTLPA TPAD" gene complement(1798569..1799228) /gene="yebE" /locus_tag="b1846" /gene_synonym="ECK1847" /gene_synonym="JW1835" /db_xref="EcoGene:EG11806" CDS complement(1798569..1799228) /gene="yebE" /locus_tag="b1846" /gene_synonym="ECK1847" /gene_synonym="JW1835" /codon_start=1 /transl_table=11 /product="DUF533 family inner membrane protein" /protein_id="AAC74916.1" /db_xref="GI:1788151" /db_xref="ASAP:ABE-0006137" /db_xref="UniProtKB/Swiss-Prot:P33218" /db_xref="EcoGene:EG11806" /translation="MANWLNQLQSLLGQSSSSTSSSADQGLVKLLVPGALGGLAGLLV ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT ARLILALVFAAKSDGHIDAKERAAIDQQLRGAGVEEQGRVLIEQAIEQPLDPQRLATG VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA E" repeat_region 1799444..1799527 /note="REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1799555..1799911) /gene="yebF" /locus_tag="b1847" /gene_synonym="ECK1848" /gene_synonym="JW1836" /db_xref="EcoGene:EG11807" CDS complement(1799555..1799911) /gene="yebF" /locus_tag="b1847" /gene_synonym="ECK1848" /gene_synonym="JW1836" /codon_start=1 /transl_table=11 /product="extracellular Colicin M immunity family protein" /protein_id="AAC74917.2" /db_xref="GI:145693150" /db_xref="ASAP:ABE-0006141" /db_xref="UniProtKB/Swiss-Prot:P33219" /db_xref="EcoGene:EG11807" /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIA ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY QVSVDCKAGMAEYQRR" gene complement(1799978..1800268) /gene="yebG" /locus_tag="b1848" /gene_synonym="ECK1849" /gene_synonym="JW1837" /db_xref="EcoGene:EG11808" CDS complement(1799978..1800268) /gene="yebG" /locus_tag="b1848" /gene_synonym="ECK1849" /gene_synonym="JW1837" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA damage-inducible protein regulated by LexA" /protein_id="AAC74918.1" /db_xref="GI:1788153" /db_xref="ASAP:ABE-0006145" /db_xref="UniProtKB/Swiss-Prot:P0ACY9" /db_xref="EcoGene:EG11808" /translation="MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTN SPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA" gene 1800402..1801580 /gene="purT" /locus_tag="b1849" /gene_synonym="ECK1850" /gene_synonym="JW1838" /db_xref="EcoGene:EG11809" CDS 1800402..1801580 /gene="purT" /locus_tag="b1849" /gene_synonym="ECK1850" /gene_synonym="JW1838" /EC_number="2.7.2.1" /function="enzyme; Purine ribonucleotide biosynthesis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase 2" /protein_id="AAC74919.1" /db_xref="GI:1788155" /db_xref="ASAP:ABE-0006162" /db_xref="UniProtKB/Swiss-Prot:P33221" /db_xref="EcoGene:EG11809" /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG " repeat_region 1801607..1801625 /note="REP136 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1801636..1802277) /gene="eda" /locus_tag="b1850" /gene_synonym="ECK1851" /gene_synonym="hga" /gene_synonym="JW1839" /gene_synonym="kdgA" /gene_synonym="kga" /db_xref="EcoGene:EG10256" CDS complement(1801636..1802277) /gene="eda" /locus_tag="b1850" /gene_synonym="ECK1851" /gene_synonym="hga" /gene_synonym="JW1839" /gene_synonym="kdgA" /gene_synonym="kga" /EC_number="4.1.2.14" /EC_number="4.1.3.16" /function="enzyme; Central intermediary metabolism: Entner-Douderoff" /experiment="N-terminus verified by Edman degradation: PMID 3136164" /note="2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009255 - Entner-Doudoroff pathway; GO_process: GO:0009436 - glyoxylate catabolic process" /codon_start=1 /transl_table=11 /product="KHG/KDPG aldolase; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase" /protein_id="AAC74920.1" /db_xref="GI:1788156" /db_xref="ASAP:ABE-0006164" /db_xref="UniProtKB/Swiss-Prot:P0A955" /db_xref="EcoGene:EG10256" /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL" gene complement(1802314..1804125) /gene="edd" /locus_tag="b1851" /gene_synonym="ECK1852" /gene_synonym="JW1840" /db_xref="EcoGene:EG10257" CDS complement(1802314..1804125) /gene="edd" /locus_tag="b1851" /gene_synonym="ECK1852" /gene_synonym="JW1840" /EC_number="4.2.1.12" /function="enzyme; Central intermediary metabolism: Entner-Douderoff" /note="GO_process: GO:0009255 - Entner-Doudoroff pathway" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydratase" /protein_id="AAC74921.1" /db_xref="GI:1788157" /db_xref="ASAP:ABE-0006166" /db_xref="UniProtKB/Swiss-Prot:P0ADF6" /db_xref="EcoGene:EG10257" /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP GTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF" gene complement(1804360..1805835) /gene="zwf" /locus_tag="b1852" /gene_synonym="ECK1853" /gene_synonym="JW1841" /db_xref="EcoGene:EG11221" CDS complement(1804360..1805835) /gene="zwf" /locus_tag="b1852" /gene_synonym="ECK1853" /gene_synonym="JW1841" /EC_number="1.1.1.49" /function="enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009051 - pentose-phosphate shunt, oxidative branch" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="AAC74922.1" /db_xref="GI:1788158" /db_xref="ASAP:ABE-0006171" /db_xref="UniProtKB/Swiss-Prot:P0AC53" /db_xref="EcoGene:EG11221" /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRL GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE" gene 1806173..1807042 /gene="yebK" /locus_tag="b1853" /gene_synonym="ECK1854" /gene_synonym="hexR" /gene_synonym="JW1842" /db_xref="EcoGene:EG12860" CDS 1806173..1807042 /gene="yebK" /locus_tag="b1853" /gene_synonym="ECK1854" /gene_synonym="hexR" /gene_synonym="JW1842" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC74923.1" /db_xref="GI:1788159" /db_xref="ASAP:ABE-0006179" /db_xref="UniProtKB/Swiss-Prot:P46118" /db_xref="EcoGene:EG12860" /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEA NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES RFDKQLLNLSDDR" gene 1807170..1808612 /gene="pykA" /locus_tag="b1854" /gene_synonym="ECK1855" /gene_synonym="JW1843" /db_xref="EcoGene:EG10803" CDS 1807170..1808612 /gene="pykA" /locus_tag="b1854" /gene_synonym="ECK1855" /gene_synonym="JW1843" /EC_number="2.7.1.40" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="pyruvate kinase II, glucose stimulated; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="pyruvate kinase II" /protein_id="AAC74924.1" /db_xref="GI:1788160" /db_xref="ASAP:ABE-0006182" /db_xref="UniProtKB/Swiss-Prot:P21599" /db_xref="EcoGene:EG10803" /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY LMSGDLVIVTQGDVMSTVGSTNTTRILTVE" repeat_region 1808620..1808649 /note="REP137 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1808743..1809714) /gene="lpxM" /locus_tag="b1855" /gene_synonym="ECK1856" /gene_synonym="JW1844" /gene_synonym="mlt" /gene_synonym="msbB" /gene_synonym="waaN" /db_xref="EcoGene:EG10614" CDS complement(1808743..1809714) /gene="lpxM" /locus_tag="b1855" /gene_synonym="ECK1856" /gene_synonym="JW1844" /gene_synonym="mlt" /gene_synonym="msbB" /gene_synonym="waaN" /EC_number="2.3.1.-" /function="putative factor; Adaptations, atypical conditions" /note="suppressor of htrB, heat shock protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process" /codon_start=1 /transl_table=11 /product="myristoyl-acyl carrier protein (ACP)-dependent acyltransferase" /protein_id="AAC74925.1" /db_xref="GI:1788161" /db_xref="ASAP:ABE-0006185" /db_xref="UniProtKB/Swiss-Prot:P24205" /db_xref="EcoGene:EG10614" /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFR DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE LAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT IARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK" gene complement(1809834..1811156) /gene="mepM" /locus_tag="b1856" /gene_synonym="ECK1857" /gene_synonym="JW5304" /gene_synonym="yebA" /db_xref="EcoGene:EG10013" CDS complement(1809834..1811156) /gene="mepM" /locus_tag="b1856" /gene_synonym="ECK1857" /gene_synonym="JW5304" /gene_synonym="yebA" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="murein DD-endopeptidase, space-maker hydrolase, septation protein" /protein_id="AAC74926.2" /db_xref="GI:87081989" /db_xref="ASAP:ABE-0006189" /db_xref="UniProtKB/Swiss-Prot:P0AFS9" /db_xref="EcoGene:EG10013" /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD" gene complement(1811172..1812104) /gene="znuA" /locus_tag="b1857" /gene_synonym="ECK1858" /gene_synonym="JW5831" /gene_synonym="yebL" /gene_synonym="yzzP" /db_xref="EcoGene:EG12678" CDS complement(1811172..1812104) /gene="znuA" /locus_tag="b1857" /gene_synonym="ECK1858" /gene_synonym="JW5831" /gene_synonym="yebL" /gene_synonym="yzzP" /function="putative factor; Not classified" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="zinc ABC transporter periplasmic binding protein" /protein_id="AAC74927.2" /db_xref="GI:87081990" /db_xref="ASAP:ABE-0006191" /db_xref="UniProtKB/Swiss-Prot:P39172" /db_xref="EcoGene:EG12678" /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQV TIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHG KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD" gene 1812183..1812938 /gene="znuC" /locus_tag="b1858" /gene_synonym="ECK1859" /gene_synonym="JW1847" /gene_synonym="yebM" /db_xref="EcoGene:EG13132" CDS 1812183..1812938 /gene="znuC" /locus_tag="b1858" /gene_synonym="ECK1859" /gene_synonym="JW1847" /gene_synonym="yebM" /function="putative transport; Not classified" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="zinc ABC transporter ATPase" /protein_id="AAC74928.1" /db_xref="GI:1788165" /db_xref="ASAP:ABE-0006198" /db_xref="UniProtKB/Swiss-Prot:P0A9X1" /db_xref="EcoGene:EG13132" /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS" gene 1812935..1813720 /gene="znuB" /locus_tag="b1859" /gene_synonym="ECK1860" /gene_synonym="JW1848" /gene_synonym="yebI" /db_xref="EcoGene:EG12368" CDS 1812935..1813720 /gene="znuB" /locus_tag="b1859" /gene_synonym="ECK1860" /gene_synonym="JW1848" /gene_synonym="yebI" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="zinc ABC transporter permease" /protein_id="AAC74929.1" /db_xref="GI:1788166" /db_xref="ASAP:ABE-0006201" /db_xref="UniProtKB/Swiss-Prot:P39832" /db_xref="EcoGene:EG12368" /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVS LMSNIRVDLMAYLFGDLLAVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFV DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV LVGMVAVTGGLTFSAVYDTPAGPSVVLCAALLFILSMMKKQAS" repeat_region 1813740..1813866 /note="REP138 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(1813867..1814877) /gene="ruvB" /locus_tag="b1860" /gene_synonym="ECK1861" /gene_synonym="JW1849" /db_xref="EcoGene:EG10924" CDS complement(1813867..1814877) /gene="ruvB" /locus_tag="b1860" /gene_synonym="ECK1861" /gene_synonym="JW1849" /EC_number="3.1.22.4" /function="enzyme; DNA - replication, repair, restriction/modification" /note="Holliday junction helicase subunit A; branch migration; repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase, component of RuvABC resolvasome" /protein_id="AAC74930.1" /db_xref="GI:1788167" /db_xref="ASAP:ABE-0006204" /db_xref="UniProtKB/Swiss-Prot:P0A812" /db_xref="EcoGene:EG10924" /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE MP" gene complement(1814886..1815497) /gene="ruvA" /locus_tag="b1861" /gene_synonym="ECK1862" /gene_synonym="JW1850" /db_xref="EcoGene:EG10923" CDS complement(1814886..1815497) /gene="ruvA" /locus_tag="b1861" /gene_synonym="ECK1862" /gene_synonym="JW1850" /EC_number="3.1.22.4" /function="enzyme; DNA - replication, repair, restriction/modification" /note="Holliday junction helicase subunit B; branch migration; repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="component of RuvABC resolvasome, regulatory subunit" /protein_id="AAC74931.1" /db_xref="GI:1788168" /db_xref="ASAP:ABE-0006206" /db_xref="UniProtKB/Swiss-Prot:P0A809" /db_xref="EcoGene:EG10923" /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL" gene complement(1815636..1815701) /gene="yobI" /locus_tag="b4677" /gene_synonym="ECK4492" /db_xref="EcoGene:EG14482" CDS complement(1815636..1815701) /gene="yobI" /locus_tag="b4677" /gene_synonym="ECK4492" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO59996.1" /db_xref="GI:226510952" /db_xref="UniProtKB/Swiss-Prot:C1P604" /db_xref="EcoGene:EG14482" /translation="MYIFITHFFTEYVILKYLLPI" gene 1815772..1816374 /gene="yebB" /locus_tag="b1862" /gene_synonym="ECK1863" /gene_synonym="JW5306" /db_xref="EcoGene:EG11136" CDS 1815772..1816374 /gene="yebB" /locus_tag="b1862" /gene_synonym="ECK1863" /gene_synonym="JW5306" /codon_start=1 /transl_table=11 /product="DUF830 family protein" /protein_id="AAC74932.2" /db_xref="GI:87081991" /db_xref="ASAP:ABE-0006213" /db_xref="UniProtKB/Swiss-Prot:P24238" /db_xref="EcoGene:EG11136" /translation="MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGH NGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLR KLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFL GSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV" gene complement(1816376..1816897) /gene="ruvC" /locus_tag="b1863" /gene_synonym="ECK1864" /gene_synonym="JW1852" /db_xref="EcoGene:EG10925" CDS complement(1816376..1816897) /gene="ruvC" /locus_tag="b1863" /gene_synonym="ECK1864" /gene_synonym="JW1852" /EC_number="3.1.22.4" /function="enzyme; DNA - replication, repair, restriction/modification" /note="Holliday junction nuclease; resolution of structures; repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="component of RuvABC resolvasome, endonuclease" /protein_id="AAC74933.1" /db_xref="GI:1788170" /db_xref="ASAP:ABE-0006215" /db_xref="UniProtKB/Swiss-Prot:P0A814" /db_xref="EcoGene:EG10925" /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM SESRLNLARGRLR" gene complement(1816932..1817672) /gene="yebC" /locus_tag="b1864" /gene_synonym="ECK1865" /gene_synonym="JW1853" /db_xref="EcoGene:EG11137" CDS complement(1816932..1817672) /gene="yebC" /locus_tag="b1864" /gene_synonym="ECK1865" /gene_synonym="JW1853" /codon_start=1 /transl_table=11 /product="UPF0082 family protein" /protein_id="AAC74934.1" /db_xref="GI:1788171" /db_xref="ASAP:ABE-0006219" /db_xref="UniProtKB/Swiss-Prot:P0A8A0" /db_xref="EcoGene:EG11137" /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR LIDMLEDCDDVQEVYHNGEISDEVAATL" gene complement(1817701..1818153) /gene="nudB" /locus_tag="b1865" /gene_synonym="ECK1866" /gene_synonym="JW1854" /gene_synonym="ntpA" /gene_synonym="orf17" /gene_synonym="yebD" /db_xref="EcoGene:EG11138" CDS complement(1817701..1818153) /gene="nudB" /locus_tag="b1865" /gene_synonym="ECK1866" /gene_synonym="JW1854" /gene_synonym="ntpA" /gene_synonym="orf17" /gene_synonym="yebD" /EC_number="3.6.1.-" /function="enzyme; folate metabolism" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="dihydroneopterin triphosphate pyrophosphatase" /protein_id="AAC74935.1" /db_xref="GI:1788172" /db_xref="ASAP:ABE-0006223" /db_xref="UniProtKB/Swiss-Prot:P0AFC0" /db_xref="EcoGene:EG11138" /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE EGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESW FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA" gene complement(1818271..1820043) /gene="aspS" /locus_tag="b1866" /gene_synonym="ECK1867" /gene_synonym="JW1855" /gene_synonym="tls" /db_xref="EcoGene:EG10097" CDS complement(1818271..1820043) /gene="aspS" /locus_tag="b1866" /gene_synonym="ECK1867" /gene_synonym="JW1855" /gene_synonym="tls" /EC_number="6.1.1.12" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2129559" /note="aspartate tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /protein_id="AAC74936.1" /db_xref="GI:1788173" /db_xref="ASAP:ABE-0006226" /db_xref="UniProtKB/Swiss-Prot:P21889" /db_xref="EcoGene:EG10097" /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMI FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE APSFANPTALAELSIQVVKKAENN" gene 1820353..1820919 /gene="yecD" /locus_tag="b1867" /gene_synonym="ECK1868" /gene_synonym="JW5307" /db_xref="EcoGene:EG12378" CDS 1820353..1820919 /gene="yecD" /locus_tag="b1867" /gene_synonym="ECK1868" /gene_synonym="JW5307" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /protein_id="AAC74937.2" /db_xref="GI:87081992" /db_xref="ASAP:ABE-0006231" /db_xref="UniProtKB/Swiss-Prot:P0ADI7" /db_xref="EcoGene:EG12378" /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF RASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKR QWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAAS AEQHNNSINHIYPRIARVRSVEEILNAL" gene 1820916..1821734 /gene="yecE" /locus_tag="b1868" /gene_synonym="ECK1869" /gene_synonym="JW1857" /db_xref="EcoGene:EG12379" CDS 1820916..1821734 /gene="yecE" /locus_tag="b1868" /gene_synonym="ECK1869" /gene_synonym="JW1857" /codon_start=1 /transl_table=11 /product="UPF0759 family protein" /protein_id="AAC74938.1" /db_xref="GI:1788175" /db_xref="ASAP:ABE-0006233" /db_xref="UniProtKB/Swiss-Prot:P37348" /db_xref="EcoGene:EG12379" /translation="MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKP EVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQL PATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVIL DSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQ KLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF" gene 1821787..1822182 /gene="yecN" /locus_tag="b1869" /gene_synonym="ECK1870" /gene_synonym="JW5308" /db_xref="EcoGene:EG14032" CDS 1821787..1822182 /gene="yecN" /locus_tag="b1869" /gene_synonym="ECK1870" /gene_synonym="JW5308" /codon_start=1 /transl_table=11 /product="MAPEG family inner membrane protein" /protein_id="AAC74939.2" /db_xref="GI:87081993" /db_xref="ASAP:ABE-0006235" /db_xref="UniProtKB/Swiss-Prot:P64515" /db_xref="EcoGene:EG14032" /translation="MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAI RIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRS GMSATWCALLLMVLANLWYMPWELVFSLR" gene 1822223..1822966 /gene="cmoA" /locus_tag="b1870" /gene_synonym="ECK1871" /gene_synonym="JW1859" /gene_synonym="yecO" /db_xref="EcoGene:EG14033" CDS 1822223..1822966 /gene="cmoA" /locus_tag="b1870" /gene_synonym="ECK1871" /gene_synonym="JW1859" /gene_synonym="yecO" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="carboxy-SAM synthase" /protein_id="AAC74940.1" /db_xref="GI:1788177" /db_xref="ASAP:ABE-0006237" /db_xref="UniProtKB/Swiss-Prot:P76290" /db_xref="EcoGene:EG14033" /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL HNAGFEHSELWFQCFNFGSLVALKAEDAA" gene 1822963..1823934 /gene="cmoB" /locus_tag="b1871" /gene_synonym="ECK1872" /gene_synonym="JW1860" /gene_synonym="yecP" /db_xref="EcoGene:EG14034" CDS 1822963..1823934 /gene="cmoB" /locus_tag="b1871" /gene_synonym="ECK1872" /gene_synonym="JW1860" /gene_synonym="yecP" /function="enzyme; tRNA modification" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent" /protein_id="AAC74941.1" /db_xref="GI:1788178" /db_xref="ASAP:ABE-0006241" /db_xref="UniProtKB/Swiss-Prot:P76291" /db_xref="EcoGene:EG14034" /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN AVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNID TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVS VTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARKP" repeat_region 1823950..1824047 /note="RIP139 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1824099..1826528) /gene="torZ" /locus_tag="b1872" /gene_synonym="bisZ" /gene_synonym="ECK1873" /gene_synonym="JW1861" /db_xref="EcoGene:EG13276" CDS complement(1824099..1826528) /gene="torZ" /locus_tag="b1872" /gene_synonym="bisZ" /gene_synonym="ECK1873" /gene_synonym="JW1861" /EC_number="1.6.6.9" /function="enzyme; Central intermediary metabolism" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="trimethylamine N-oxide reductase system III, catalytic subunit" /protein_id="AAC74942.2" /db_xref="GI:87081994" /db_xref="ASAP:ABE-0006244" /db_xref="UniProtKB/Swiss-Prot:P46923" /db_xref="EcoGene:EG13276" /translation="MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRW GAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPA KGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPL NTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFDDNATWIAPNMGTDVA LMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQ IVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYS NGGNPTRVGGVLPEMSAAIAGHASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQ TYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTS FERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDE MAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRHSEKNEQYVRYGDFRADPVK NALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLH SQLNYAELRKKYAIADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIK KGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPK LTAFDQPAVQA" gene complement(1826553..1827653) /gene="torY" /locus_tag="b1873" /gene_synonym="ECK1874" /gene_synonym="JW1862" /gene_synonym="yecK" /db_xref="EcoGene:EG13277" CDS complement(1826553..1827653) /gene="torY" /locus_tag="b1873" /gene_synonym="ECK1874" /gene_synonym="JW1862" /gene_synonym="yecK" /function="putative enzyme; Not classified" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="TMAO reductase III (TorYZ), cytochrome c-type subunit" /protein_id="AAC74943.1" /db_xref="GI:1788181" /db_xref="ASAP:ABE-0006246" /db_xref="UniProtKB/Swiss-Prot:P52005" /db_xref="EcoGene:EG13277" /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKVLHKTSDTAFCLSCHS MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS DDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDSET CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSHIGELATVNPGTD LTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADE YGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIA KGMGARTSMSENELDILTRYFQYNAKDITEKQ" gene complement(1828041..1828787) /gene="cutC" /locus_tag="b1874" /gene_synonym="dinY?" /gene_synonym="ECK1875" /gene_synonym="JW1863" /db_xref="EcoGene:EG12956" CDS complement(1828041..1828787) /gene="cutC" /locus_tag="b1874" /gene_synonym="dinY?" /gene_synonym="ECK1875" /gene_synonym="JW1863" /function="putative transport; Detoxification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="copper homeostasis protein" /protein_id="AAC74944.2" /db_xref="GI:87081995" /db_xref="ASAP:ABE-0006252" /db_xref="UniProtKB/Swiss-Prot:P67826" /db_xref="EcoGene:EG12956" /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK SVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD MPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSK IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS DEHADEYSRYIVDGAAVAEMKGIIERHQAK" gene complement(1828801..1829367) /gene="yecM" /locus_tag="b1875" /gene_synonym="ECK1876" /gene_synonym="JW5309" /gene_synonym="yecL" /db_xref="EcoGene:EG13405" CDS complement(1828801..1829367) /gene="yecM" /locus_tag="b1875" /gene_synonym="ECK1876" /gene_synonym="JW5309" /gene_synonym="yecL" /codon_start=1 /transl_table=11 /product="putative metal-binding enzyme" /protein_id="AAC74945.2" /db_xref="GI:87081996" /db_xref="ASAP:ABE-0006257" /db_xref="UniProtKB/Swiss-Prot:P52007" /db_xref="EcoGene:EG13405" /translation="MANWQSIDELQDIASDLPRFIHALDELSRRLGLNITPLTADHIS LRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNP TLAVTDGKTTIKFHPWSIEEIVASEQSA" gene 1829583..1831316 /gene="argS" /locus_tag="b1876" /gene_synonym="ECK1877" /gene_synonym="JW1865" /gene_synonym="lov" /db_xref="EcoGene:EG10071" CDS 1829583..1831316 /gene="argS" /locus_tag="b1876" /gene_synonym="ECK1877" /gene_synonym="JW1865" /gene_synonym="lov" /EC_number="6.1.1.19" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 2668891" /note="arginine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="AAC74946.1" /db_xref="GI:1788184" /db_xref="ASAP:ABE-0006264" /db_xref="UniProtKB/Swiss-Prot:P11875" /db_xref="EcoGene:EG10071" /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML AFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAAPVIIREDREAQLAARLLQFEETLT VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL DTLGIETVERM" gene 1831493..1831981 /gene="yecT" /locus_tag="b1877" /gene_synonym="ECK1878" /gene_synonym="JW5310" /db_xref="EcoGene:EG14316" CDS 1831493..1831981 /gene="yecT" /locus_tag="b1877" /gene_synonym="ECK1878" /gene_synonym="JW5310" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC74947.2" /db_xref="GI:87081997" /db_xref="ASAP:ABE-0006268" /db_xref="UniProtKB/Swiss-Prot:P76296" /db_xref="EcoGene:EG14316" /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT DVNVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWL DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT RG" gene complement(1832101..1832493) /gene="flhE" /locus_tag="b1878" /gene_synonym="ECK1879" /gene_synonym="JW1867" /db_xref="EcoGene:EG14013" CDS complement(1832101..1832493) /gene="flhE" /locus_tag="b1878" /gene_synonym="ECK1879" /gene_synonym="JW1867" /function="structural component; Surface structures" /note="flagellar protein" /codon_start=1 /transl_table=11 /product="proton seal during flagellar secretion" /protein_id="AAC74948.1" /db_xref="GI:1788186" /db_xref="ASAP:ABE-0006270" /db_xref="UniProtKB/Swiss-Prot:P76297" /db_xref="EcoGene:EG14013" /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL RFIWEVPGGGRLIPPLKVQRNEVIVNYR" gene complement(1832493..1834571) /gene="flhA" /locus_tag="b1879" /gene_synonym="ECK1880" /gene_synonym="flaH" /gene_synonym="JW1868" /db_xref="EcoGene:EG14273" CDS complement(1832493..1834571) /gene="flhA" /locus_tag="b1879" /gene_synonym="ECK1880" /gene_synonym="flaH" /gene_synonym="JW1868" /function="putative structural component; Surface structures" /note="flagellar biosynthesis; possible export of flagellar proteins; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="putative flagellar export pore protein" /protein_id="AAC74949.1" /db_xref="GI:1788187" /db_xref="ASAP:ABE-0006272" /db_xref="UniProtKB/Swiss-Prot:P76298" /db_xref="EcoGene:EG14273" /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI NIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKA PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE AQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH IRMTATIGGK" gene complement(1834564..1835712) /gene="flhB" /locus_tag="b1880" /gene_synonym="ECK1881" /gene_synonym="flaG" /gene_synonym="JW1869" /gene_synonym="yecQ" /db_xref="EcoGene:EG14035" CDS complement(1834564..1835712) /gene="flhB" /locus_tag="b1880" /gene_synonym="ECK1881" /gene_synonym="flaG" /gene_synonym="JW1869" /gene_synonym="yecQ" /function="structural component; Not classified" /note="putative part of export apparatus for flagellar proteins; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="flagellin export apparatus, substrate specificity protein" /protein_id="AAC74950.1" /db_xref="GI:1788188" /db_xref="ASAP:ABE-0006275" /db_xref="UniProtKB/Swiss-Prot:P76299" /db_xref="EcoGene:EG14035" /translation="MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSV IWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLV ALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTG FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK LRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVAL QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQ LYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHLPVPEALDFINEKPTHE" repeat_region 1835843..1835905 /note="REP140 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(1835914..1836558) /gene="cheZ" /locus_tag="b1881" /gene_synonym="ECK1882" /gene_synonym="JW1870" /db_xref="EcoGene:EG10151" CDS complement(1835914..1836558) /gene="cheZ" /locus_tag="b1881" /gene_synonym="ECK1882" /gene_synonym="JW1870" /function="regulator; Chemotaxis and mobility" /note="chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator; GO_process: GO:0006464 - protein modification process; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="chemotaxis regulator, protein phosphatase for CheY" /protein_id="AAC74951.1" /db_xref="GI:1788190" /db_xref="ASAP:ABE-0006278" /db_xref="UniProtKB/Swiss-Prot:P0A9H9" /db_xref="EcoGene:EG10151" /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF" gene complement(1836569..1836958) /gene="cheY" /locus_tag="b1882" /gene_synonym="ECK1883" /gene_synonym="JW1871" /db_xref="EcoGene:EG10150" CDS complement(1836569..1836958) /gene="cheY" /locus_tag="b1882" /gene_synonym="ECK1883" /gene_synonym="JW1871" /function="regulator; Chemotaxis and mobility" /note="chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="chemotaxis regulator transmitting signal to flagellar motor component" /protein_id="AAC74952.1" /db_xref="GI:1788191" /db_xref="ASAP:ABE-0006280" /db_xref="UniProtKB/Swiss-Prot:P0AE67" /db_xref="EcoGene:EG10150" /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG ASGYVVKPFTAATLEEKLNKIFEKLGM" gene complement(1836973..1838022) /gene="cheB" /locus_tag="b1883" /gene_synonym="ECK1884" /gene_synonym="JW1872" /db_xref="EcoGene:EG10147" CDS complement(1836973..1838022) /gene="cheB" /locus_tag="b1883" /gene_synonym="ECK1884" /gene_synonym="JW1872" /EC_number="3.1.1.61" /function="enzyme; Chemotaxis and mobility" /note="response regulator for chemotaxis (cheA sensor); protein methylesterase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA" /protein_id="AAC74953.1" /db_xref="GI:1788192" /db_xref="ASAP:ABE-0006284" /db_xref="UniProtKB/Swiss-Prot:P07330" /db_xref="EcoGene:EG10147" /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI DFVTKPQLGIREGMLAYNEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE RVLPGHAYIAPGDRHMELSRSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAV GVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVS QQMLAKISAGQAIRI" gene complement(1838025..1838885) /gene="cheR" /locus_tag="b1884" /gene_synonym="cheX" /gene_synonym="ECK1885" /gene_synonym="JW1873" /db_xref="EcoGene:EG10148" CDS complement(1838025..1838885) /gene="cheR" /locus_tag="b1884" /gene_synonym="cheX" /gene_synonym="ECK1885" /gene_synonym="JW1873" /EC_number="2.1.1.80" /function="enzyme; Chemotaxis and mobility" /note="response regulator for chemotaxis; protein glutamate methyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="chemotaxis regulator, protein-glutamate methyltransferase" /protein_id="AAC74954.1" /db_xref="GI:1788193" /db_xref="ASAP:ABE-0006286" /db_xref="UniProtKB/Swiss-Prot:P07364" /db_xref="EcoGene:EG10148" /translation="MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLAD HKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHH FPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVL EKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQY TVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLR GQTVYALSKD" gene complement(1838904..1840505) /gene="tap" /locus_tag="b1885" /gene_synonym="ECK1886" /gene_synonym="JW1874" /db_xref="EcoGene:EG10987" CDS complement(1838904..1840505) /gene="tap" /locus_tag="b1885" /gene_synonym="ECK1886" /gene_synonym="JW1874" /function="regulator; Chemotaxis and mobility" /note="methyl-accepting chemotaxis protein IV, peptide sensor receptor; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="methyl-accepting protein IV" /protein_id="AAC74955.1" /db_xref="GI:1788194" /db_xref="ASAP:ABE-0006288" /db_xref="UniProtKB/Swiss-Prot:P07018" /db_xref="EcoGene:EG10987" /translation="MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVE QSNQQRAALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFK SFMAMTAGNEHVRGLQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFD VNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPL AIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIG IAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQ AGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGF AVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVND IMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADHLSSRV AVFTLEEHEVARHESVQLQIAPVVS" gene complement(1840551..1842212) /gene="tar" /locus_tag="b1886" /gene_synonym="cheM" /gene_synonym="ECK1887" /gene_synonym="JW1875" /db_xref="EcoGene:EG10988" CDS complement(1840551..1842212) /gene="tar" /locus_tag="b1886" /gene_synonym="cheM" /gene_synonym="ECK1887" /gene_synonym="JW1875" /function="regulator; Chemotaxis and mobility" /note="methyl-accepting chemotaxis protein II, aspartate sensor receptor; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein II" /protein_id="AAC74956.1" /db_xref="GI:1788195" /db_xref="ASAP:ABE-0006290" /db_xref="UniProtKB/Swiss-Prot:P07017" /db_xref="EcoGene:EG10988" /translation="MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSN QLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAAT HYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNA MGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLT PLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIY AGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDT AQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR GFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRV TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQ AVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF" gene complement(1842357..1842860) /gene="cheW" /locus_tag="b1887" /gene_synonym="ECK1888" /gene_synonym="JW1876" /db_xref="EcoGene:EG10149" CDS complement(1842357..1842860) /gene="cheW" /locus_tag="b1887" /gene_synonym="ECK1888" /gene_synonym="JW1876" /function="regulator; Chemotaxis and mobility" /note="positive regulator of CheA protein activity; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="purine-binding chemotaxis protein" /protein_id="AAC74957.1" /db_xref="GI:1788196" /db_xref="ASAP:ABE-0006292" /db_xref="UniProtKB/Swiss-Prot:P0A964" /db_xref="EcoGene:EG10149" /translation="MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ VTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVV DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD SAASEVA" gene complement(1842881..1844845) /gene="cheA" /locus_tag="b1888" /gene_synonym="ECK1889" /gene_synonym="JW1877" /db_xref="EcoGene:EG10146" CDS complement(1842881..1844845) /gene="cheA" /locus_tag="b1888" /gene_synonym="ECK1889" /gene_synonym="JW1877" /function="enzyme; Chemotaxis and mobility" /note="sensory transducer kinase between chemo- signal receptors and CheB and CheY; GO_process: GO:0006464 - protein modification process; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein" /protein_id="AAC74958.1" /db_xref="GI:1788197" /db_xref="ASAP:ABE-0006294" /db_xref="UniProtKB/Swiss-Prot:P07363" /db_xref="EcoGene:EG10146" /translation="MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF RAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT ILGDGSVALIVDVSALQAINREQRMANTAA" gene complement(1844850..1845776) /gene="motB" /locus_tag="b1889" /gene_synonym="ECK1890" /gene_synonym="flaJ" /gene_synonym="JW1878" /db_xref="EcoGene:EG10602" CDS complement(1844850..1845776) /gene="motB" /locus_tag="b1889" /gene_synonym="ECK1890" /gene_synonym="flaJ" /gene_synonym="JW1878" /function="structural component; Chemotaxis and mobility" /note="enables flagellar motor rotation, linking torque machinery to cell wall; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="protein that enables flagellar motor rotation" /protein_id="AAC74959.1" /db_xref="GI:1788198" /db_xref="ASAP:ABE-0006297" /db_xref="UniProtKB/Swiss-Prot:P0AF06" /db_xref="EcoGene:EG10602" /translation="MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVM WLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPN IEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPM FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRA NASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHE NAESQNEPVSALEKPEVAPQVSVPTMPSAEPR" gene complement(1845773..1846660) /gene="motA" /locus_tag="b1890" /gene_synonym="ECK1891" /gene_synonym="flaJ" /gene_synonym="JW1879" /db_xref="EcoGene:EG10601" CDS complement(1845773..1846660) /gene="motA" /locus_tag="b1890" /gene_synonym="ECK1891" /gene_synonym="flaJ" /gene_synonym="JW1879" /function="phenotype; Chemotaxis and mobility" /note="proton conductor component of motor; no effect on switching; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="proton conductor component of flagella motor" /protein_id="AAC74960.1" /db_xref="GI:1788199" /db_xref="ASAP:ABE-0006299" /db_xref="UniProtKB/Swiss-Prot:P09348" /db_xref="EcoGene:EG10601" /translation="MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGS FIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIE NPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEV PANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYG FISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL EEHVRAVKNPQQQTTTEEA" gene complement(1846787..1847365) /gene="flhC" /locus_tag="b1891" /gene_synonym="ECK1892" /gene_synonym="flaI" /gene_synonym="JW1880" /db_xref="EcoGene:EG10319" CDS complement(1846787..1847365) /gene="flhC" /locus_tag="b1891" /gene_synonym="ECK1892" /gene_synonym="flaI" /gene_synonym="JW1880" /function="regulator; Surface structures" /note="regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?; GO_component: GO:0019861 - flagellum; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006350 - transcription; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar class II regulon transcriptional activator, with FlhD" /protein_id="AAC74961.1" /db_xref="GI:1788201" /db_xref="ASAP:ABE-0006301" /db_xref="UniProtKB/Swiss-Prot:P0ABY7" /db_xref="EcoGene:EG10319" /translation="MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLY KELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLY LEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLC QPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV" gene complement(1847368..1847718) /gene="flhD" /locus_tag="b1892" /gene_synonym="ECK1893" /gene_synonym="flbB" /gene_synonym="JW1881" /db_xref="EcoGene:EG10320" CDS complement(1847368..1847718) /gene="flhD" /locus_tag="b1892" /gene_synonym="ECK1893" /gene_synonym="flbB" /gene_synonym="JW1881" /function="regulator; Surface structures" /note="regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?; GO_component: GO:0019861 - flagellum; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006350 - transcription; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar class II regulon transcriptional activator, with FlhC" /protein_id="AAC74962.2" /db_xref="GI:145693151" /db_xref="ASAP:ABE-0006303" /db_xref="UniProtKB/Swiss-Prot:P0A8S9" /db_xref="EcoGene:EG10320" /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLN DVNQPEEALRKKRA" mobile_element complement(1848024..1848791) /mobile_element_type="insertion sequence:IS1H" gene complement(1848039..1848542) /gene="insB1" /locus_tag="b1893" /gene_synonym="ECK0022" /db_xref="EcoGene:EG40002" CDS complement(1848039..1848542) /gene="insB1" /locus_tag="b1893" /gene_synonym="ECK0022" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 transposase B" /protein_id="AAC74963.1" /db_xref="GI:1788203" /db_xref="ASAP:ABE-0006308" /db_xref="UniProtKB/Swiss-Prot:P0CF30" /db_xref="EcoGene:EG40002" /translation="MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(1848461..1848736) /gene="insA" /locus_tag="b1894" /gene_synonym="ECK4541" /note="insA8" /db_xref="EcoGene:EG40001" CDS complement(1848461..1848736) /gene="insA" /locus_tag="b1894" /gene_synonym="ECK4541" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS1 repressor TnpA" /protein_id="AAC74964.1" /db_xref="GI:1788204" /db_xref="ASAP:ABE-0006311" /db_xref="UniProtKB/Swiss-Prot:P0CF13" /db_xref="EcoGene:EG40001" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR" gene 1849274..1849702 /gene="uspC" /locus_tag="b1895" /gene_synonym="ECK1894" /gene_synonym="JW1884" /gene_synonym="yecG" /db_xref="EcoGene:EG12862" CDS 1849274..1849702 /gene="uspC" /locus_tag="b1895" /gene_synonym="ECK1894" /gene_synonym="JW1884" /gene_synonym="yecG" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="universal stress protein" /protein_id="AAC74965.1" /db_xref="GI:1788205" /db_xref="ASAP:ABE-0006316" /db_xref="UniProtKB/Swiss-Prot:P46888" /db_xref="EcoGene:EG12862" /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE MYNQLAAPMLEDLRSVMHEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD" gene complement(1849709..1851133) /gene="otsA" /locus_tag="b1896" /gene_synonym="ECK1895" /gene_synonym="JW5312" /gene_synonym="pexA" /db_xref="EcoGene:EG11751" CDS complement(1849709..1851133) /gene="otsA" /locus_tag="b1896" /gene_synonym="ECK1895" /gene_synonym="JW5312" /gene_synonym="pexA" /EC_number="2.4.1.15" /function="enzyme; Osmotic adaptation" /note="GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="trehalose-6-phosphate synthase" /protein_id="AAC74966.1" /db_xref="GI:1788206" /db_xref="ASAP:ABE-0006318" /db_xref="UniProtKB/Swiss-Prot:P31677" /db_xref="EcoGene:EG11751" /translation="MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSG ETGNEDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPA WDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT PEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKA FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLA YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLY YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA NELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISD LKQIVPRSAESQQRDKVATFPKLA" gene complement(1851108..1851908) /gene="otsB" /locus_tag="b1897" /gene_synonym="ECK1896" /gene_synonym="JW1886" /gene_synonym="otsP" /db_xref="EcoGene:EG11752" CDS complement(1851108..1851908) /gene="otsB" /locus_tag="b1897" /gene_synonym="ECK1896" /gene_synonym="JW1886" /gene_synonym="otsP" /EC_number="3.1.3.12" /function="enzyme; Osmotic adaptation" /experiment="N-terminus verified by Edman degradation: PMID 8045430" /note="trehalose-6-phosphate phophatase, biosynthetic; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="trehalose-6-phosphate phosphatase, biosynthetic" /protein_id="AAC74967.1" /db_xref="GI:1788207" /db_xref="ASAP:ABE-0006320" /db_xref="UniProtKB/Swiss-Prot:P31678" /db_xref="EcoGene:EG11752" /translation="MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQG LQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAI ARDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVK IGTGATQASWRLAGVPDVWSWLEMITTALQQKRENNRSDDYESFSRSI" gene complement(1852075..1853061) /gene="araH" /locus_tag="b4460" /gene_synonym="ECK1897" /gene_synonym="JW1887" /db_xref="EcoGene:EG10059" CDS complement(1852075..1853061) /gene="araH" /locus_tag="b4460" /gene_synonym="ECK1897" /gene_synonym="JW1887" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="high-affinity L-arabinose transport protein (ABC superfamily, membrane); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose ABC transporter permease" /protein_id="AAT48138.2" /db_xref="GI:145693152" /db_xref="ASAP:ABE-0174093" /db_xref="UniProtKB/Swiss-Prot:P0AE26" /db_xref="EcoGene:EG10059" /translation="MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPN FATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESL WIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDE SFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVV RTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKI SYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV" gene complement(1853076..1854590) /gene="araG" /locus_tag="b1900" /gene_synonym="ECK1898" /gene_synonym="JW1888" /db_xref="EcoGene:EG10058" CDS complement(1853076..1854590) /gene="araG" /locus_tag="b1900" /gene_synonym="ECK1898" /gene_synonym="JW1888" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="ATP-binding component of high-affinity L-arabinose transport system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose ABC transporter ATPase" /protein_id="AAC74970.1" /db_xref="GI:1788210" /db_xref="ASAP:ABE-0006328" /db_xref="UniProtKB/Swiss-Prot:P0AAF3" /db_xref="EcoGene:EG10058" /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPIS LAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPG AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA" gene complement(1854660..1855649) /gene="araF" /locus_tag="b1901" /gene_synonym="ECK1899" /gene_synonym="JW1889" /db_xref="EcoGene:EG10057" CDS complement(1854660..1855649) /gene="araF" /locus_tag="b1901" /gene_synonym="ECK1899" /gene_synonym="JW1889" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="L-arabinose-binding periplasmic protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-arabinose ABC transporter periplasmic binding protein" /protein_id="AAC74971.1" /db_xref="GI:1788211" /db_xref="ASAP:ABE-0006330" /db_xref="UniProtKB/Swiss-Prot:P02924" /db_xref="EcoGene:EG10057" /translation="MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEW KFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR GYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAV MAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPE VKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLL PSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK" gene 1856446..1856949 /gene="ftnB" /locus_tag="b1902" /gene_synonym="ECK1900" /gene_synonym="JW1890" /gene_synonym="yecI" /db_xref="EcoGene:EG13175" CDS 1856446..1856949 /gene="ftnB" /locus_tag="b1902" /gene_synonym="ECK1900" /gene_synonym="JW1890" /gene_synonym="yecI" /function="putative carrier; Transport of small molecules: Cations" /note="ferritin-like protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferritin B, putative ferrous iron reservoir" /protein_id="AAC74972.1" /db_xref="GI:1788212" /db_xref="ASAP:ABE-0006333" /db_xref="UniProtKB/Swiss-Prot:P0A9A2" /db_xref="EcoGene:EG13175" /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN VVSHQLH" gene complement(1857028..1857279) /gene="yecJ" /locus_tag="b4537" /gene_synonym="ECK1901" /gene_synonym="JW1891" /db_xref="EcoGene:EG13242" CDS complement(1857028..1857279) /gene="yecJ" /locus_tag="b4537" /gene_synonym="ECK1901" /gene_synonym="JW1891" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DUF2766 family protein" /protein_id="AAC74973.2" /db_xref="GI:87081998" /db_xref="ASAP:ABE-0285058" /db_xref="UniProtKB/Swiss-Prot:P0AD10" /db_xref="EcoGene:EG13242" /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ LKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGESH" gene complement(1857394..1857480) /gene="azuC" /locus_tag="b4663" /gene_synonym="ECK4478" /gene_synonym="IS092" /gene_synonym="isrB" /db_xref="EcoGene:EG14468" CDS complement(1857394..1857480) /gene="azuC" /locus_tag="b4663" /gene_synonym="ECK4478" /gene_synonym="IS092" /gene_synonym="isrB" /codon_start=1 /transl_table=11 /product="acid-inducible small membrane-associated protein" /protein_id="ACO59997.1" /db_xref="GI:226510953" /db_xref="UniProtKB/Swiss-Prot:C1P605" /db_xref="EcoGene:EG14468" /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR" gene 1857743..1858066 /gene="yecR" /locus_tag="b1904" /gene_synonym="ECK1903" /gene_synonym="JW1892" /db_xref="EcoGene:EG14036" CDS 1857743..1858066 /gene="yecR" /locus_tag="b1904" /gene_synonym="ECK1903" /gene_synonym="JW1892" /codon_start=1 /transl_table=11 /product="lipoprotein, function unknown" /protein_id="AAC74974.1" /db_xref="GI:1788215" /db_xref="ASAP:ABE-0006338" /db_xref="UniProtKB/Swiss-Prot:P76308" /db_xref="EcoGene:EG14036" /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ HAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA FPVFL" gene 1858237..1858734 /gene="ftnA" /locus_tag="b1905" /gene_synonym="ECK1904" /gene_synonym="ftn" /gene_synonym="gen-165" /gene_synonym="JW1893" /gene_synonym="rsgA" /db_xref="EcoGene:EG10921" CDS 1858237..1858734 /gene="ftnA" /locus_tag="b1905" /gene_synonym="ECK1904" /gene_synonym="ftn" /gene_synonym="gen-165" /gene_synonym="JW1893" /gene_synonym="rsgA" /function="carrier; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 8281950" /note="cytoplasmic ferritin (an iron storage protein); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="ferritin iron storage protein (cytoplasmic)" /protein_id="AAC74975.1" /db_xref="GI:1788216" /db_xref="ASAP:ABE-0006342" /db_xref="UniProtKB/Swiss-Prot:P0A998" /db_xref="EcoGene:EG10921" /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR RHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST LDTQN" gene complement(1858772..1859011) /gene="yecH" /locus_tag="b1906" /gene_synonym="ECK1905" /gene_synonym="JW1894" /db_xref="EcoGene:EG12863" CDS complement(1858772..1859011) /gene="yecH" /locus_tag="b1906" /gene_synonym="ECK1905" /gene_synonym="JW1894" /codon_start=1 /transl_table=11 /product="DUF2492 family protein" /protein_id="AAC74976.1" /db_xref="GI:1788217" /db_xref="ASAP:ABE-0006344" /db_xref="UniProtKB/Swiss-Prot:P46887" /db_xref="EcoGene:EG12863" /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH" gene 1859202..1860413 /gene="tyrP" /locus_tag="b1907" /gene_synonym="ECK1906" /gene_synonym="JW1895" /db_xref="EcoGene:EG11041" CDS 1859202..1860413 /gene="tyrP" /locus_tag="b1907" /gene_synonym="ECK1906" /gene_synonym="JW1895" /function="transport; Transport of small molecules: Amino acids, amines" /note="tyrosine-specific transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006571 - tyrosine biosynthetic process" /codon_start=1 /transl_table=11 /product="tyrosine transporter" /protein_id="AAC74977.1" /db_xref="GI:1788218" /db_xref="ASAP:ABE-0006355" /db_xref="UniProtKB/Swiss-Prot:P0AAD4" /db_xref="EcoGene:EG11041" /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVF IIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF LIAAGLLPEVG" gene complement(1860475..1861140) /gene="yecA" /locus_tag="b1908" /gene_synonym="ECK1907" /gene_synonym="JW1896" /db_xref="EcoGene:EG11139" CDS complement(1860475..1861140) /gene="yecA" /locus_tag="b1908" /gene_synonym="ECK1907" /gene_synonym="JW1896" /codon_start=1 /transl_table=11 /product="UPF0149 family protein" /protein_id="AAC74978.1" /db_xref="GI:1788219" /db_xref="ASAP:ABE-0006357" /db_xref="UniProtKB/Swiss-Prot:P0AD05" /db_xref="EcoGene:EG11139" /translation="MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSP QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC CLH" gene complement(1861336..1861422) /gene="leuZ" /locus_tag="b1909" /gene_synonym="ECK1908" /gene_synonym="JWR0033" /db_xref="EcoGene:EG30054" tRNA complement(1861336..1861422) /gene="leuZ" /locus_tag="b1909" /gene_synonym="ECK1908" /gene_synonym="JWR0033" /product="tRNA-Leu" /note="anticodon: GAG" /db_xref="ASAP:ABE-0006361" /db_xref="EcoGene:EG30054" gene complement(1861435..1861508) /gene="cysT" /locus_tag="b1910" /gene_synonym="ECK1909" /gene_synonym="JWR0034" /db_xref="EcoGene:EG30026" tRNA complement(1861435..1861508) /gene="cysT" /locus_tag="b1910" /gene_synonym="ECK1909" /gene_synonym="JWR0034" /product="tRNA-Cys" /note="anticodon: GCA" /db_xref="ASAP:ABE-0006363" /db_xref="EcoGene:EG30026" gene complement(1861563..1861638) /gene="glyW" /locus_tag="b1911" /gene_synonym="ECK1910" /gene_synonym="ins" /gene_synonym="JWR0035" /gene_synonym="mutC" /gene_synonym="suA58" /gene_synonym="suA78" /db_xref="EcoGene:EG30039" tRNA complement(1861563..1861638) /gene="glyW" /locus_tag="b1911" /gene_synonym="ECK1910" /gene_synonym="ins" /gene_synonym="JWR0035" /gene_synonym="mutC" /gene_synonym="suA58" /gene_synonym="suA78" /product="tRNA-Gly" /note="anticodon: GCC" /db_xref="ASAP:ABE-0006365" /db_xref="EcoGene:EG30039" gene complement(1861790..1862338) /gene="pgsA" /locus_tag="b1912" /gene_synonym="ECK1911" /gene_synonym="JW1897" /db_xref="EcoGene:EG10706" CDS complement(1861790..1862338) /gene="pgsA" /locus_tag="b1912" /gene_synonym="ECK1911" /gene_synonym="JW1897" /EC_number="2.7.8.5" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /note="phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphate synthetase" /protein_id="AAC74979.1" /db_xref="GI:1788220" /db_xref="ASAP:ABE-0006367" /db_xref="UniProtKB/Swiss-Prot:P0ABF8" /db_xref="EcoGene:EG10706" /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA AVLTLWSMLQYLSAARADLLDQ" gene complement(1862395..1864227) /gene="uvrC" /locus_tag="b1913" /gene_synonym="ECK1912" /gene_synonym="JW1898" /db_xref="EcoGene:EG11063" CDS complement(1862395..1864227) /gene="uvrC" /locus_tag="b1913" /gene_synonym="ECK1912" /gene_synonym="JW1898" /function="enzyme; Degradation of DNA" /note="excinuclease ABC, subunit C; repair of UV damage to DNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009314 - response to radiation" /codon_start=1 /transl_table=11 /product="excinuclease UvrABC, endonuclease subunit" /protein_id="AAC74980.2" /db_xref="GI:87081999" /db_xref="ASAP:ABE-0006370" /db_xref="UniProtKB/Swiss-Prot:P0A8G0" /db_xref="EcoGene:EG11063" /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET LFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH" gene complement(1864224..1864880) /gene="uvrY" /locus_tag="b1914" /gene_synonym="ECK1913" /gene_synonym="gacA" /gene_synonym="JW1899" /gene_synonym="sirA" /gene_synonym="yecB" /db_xref="EcoGene:EG11140" CDS complement(1864224..1864880) /gene="uvrY" /locus_tag="b1914" /gene_synonym="ECK1913" /gene_synonym="gacA" /gene_synonym="JW1899" /gene_synonym="sirA" /gene_synonym="yecB" /function="putative regulator; Not classified" /note="putative 2-component transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with BarA" /protein_id="AAC74981.1" /db_xref="GI:1788222" /db_xref="ASAP:ABE-0006373" /db_xref="UniProtKB/Swiss-Prot:P0AED5" /db_xref="EcoGene:EG11140" /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ " gene 1865339..1865563 /gene="yecF" /locus_tag="b1915" /gene_synonym="ECK1914" /gene_synonym="JW1900" /db_xref="EcoGene:EG12861" CDS 1865339..1865563 /gene="yecF" /locus_tag="b1915" /gene_synonym="ECK1914" /gene_synonym="JW1900" /codon_start=1 /transl_table=11 /product="DUF2594 family protein" /protein_id="AAC74982.1" /db_xref="GI:1788223" /db_xref="ASAP:ABE-0006379" /db_xref="UniProtKB/Swiss-Prot:P0AD07" /db_xref="EcoGene:EG12861" /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK MEKQLALIEDETQAAVFSKTVKQIKQAYRQ" gene complement(1865631..1866353) /gene="sdiA" /locus_tag="b1916" /gene_synonym="ECK1915" /gene_synonym="JW1901" /gene_synonym="uvrX" /db_xref="EcoGene:EG10935" CDS complement(1865631..1866353) /gene="sdiA" /locus_tag="b1916" /gene_synonym="ECK1915" /gene_synonym="JW1901" /gene_synonym="uvrX" /function="regulator; Cell division" /note="transcriptional regulator of ftsQAZ gene cluster; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="quorum-sensing transcriptional activator" /protein_id="AAC74983.1" /db_xref="GI:1788224" /db_xref="ASAP:ABE-0006381" /db_xref="UniProtKB/Swiss-Prot:P07026" /db_xref="EcoGene:EG10935" /translation="MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSL CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRE SLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNM QKKINAPNKTQVACYAAATGLI" gene complement(1866583..1867335) /gene="yecC" /locus_tag="b1917" /gene_synonym="ECK1916" /gene_synonym="JW1902" /db_xref="EcoGene:EG12347" CDS complement(1866583..1867335) /gene="yecC" /locus_tag="b1917" /gene_synonym="ECK1916" /gene_synonym="JW1902" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC74984.1" /db_xref="GI:1788225" /db_xref="ASAP:ABE-0006384" /db_xref="UniProtKB/Swiss-Prot:P37774" /db_xref="EcoGene:EG12347" /translation="MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD QGRIVEQGAAKALFADPEQPRTRQFLEKFLLQ" gene complement(1867332..1868000) /gene="yecS" /locus_tag="b1918" /gene_synonym="ECK1917" /gene_synonym="JW1903" /db_xref="EcoGene:EG14037" CDS complement(1867332..1868000) /gene="yecS" /locus_tag="b1918" /gene_synonym="ECK1917" /gene_synonym="JW1903" /function="putative transport; Not classified" /note="putative transport system permease protein (former yecC); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="ABC family putative inner membrane permease" /protein_id="AAC74985.1" /db_xref="GI:1788226" /db_xref="ASAP:ABE-0006386" /db_xref="UniProtKB/Swiss-Prot:P0AFT2" /db_xref="EcoGene:EG14037" /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAY AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE REPK" gene complement(1868015..1869001) /gene="dcyD" /locus_tag="b1919" /gene_synonym="ECK1918" /gene_synonym="JW5313" /gene_synonym="yedO" /db_xref="EcoGene:EG14038" CDS complement(1868015..1869001) /gene="dcyD" /locus_tag="b1919" /gene_synonym="ECK1918" /gene_synonym="JW5313" /gene_synonym="yedO" /EC_number="4.4.1.15" /function="putative enzyme; Not classified" /note="putative 1-aminocyclopropane-1-carboxylate deaminase" /codon_start=1 /transl_table=11 /product="D-cysteine desulfhydrase, PLP-dependent" /protein_id="AAC74986.2" /db_xref="GI:87082000" /db_xref="ASAP:ABE-0006389" /db_xref="UniProtKB/Swiss-Prot:P76316" /db_xref="EcoGene:EG14038" /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP IGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV" gene complement(1869106..1869906) /gene="fliY" /locus_tag="b1920" /gene_synonym="ECK1919" /gene_synonym="JW1905" /gene_synonym="yzzR" /db_xref="EcoGene:EG12680" CDS complement(1869106..1869906) /gene="fliY" /locus_tag="b1920" /gene_synonym="ECK1919" /gene_synonym="JW1905" /gene_synonym="yzzR" /function="putative transport; Not classified" /note="putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0019344 - cysteine biosynthetic process; GO_process: GO:0042883 - cysteine transport" /codon_start=1 /transl_table=11 /product="cystine transporter subunit" /protein_id="AAC74987.1" /db_xref="GI:1788228" /db_xref="ASAP:ABE-0006392" /db_xref="UniProtKB/Swiss-Prot:P0AEM9" /db_xref="EcoGene:EG12680" /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNY EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK" gene complement(1869994..1870545) /gene="fliZ" /locus_tag="b1921" /gene_synonym="ECK1920" /gene_synonym="JW1906" /gene_synonym="yedH" /db_xref="EcoGene:EG11356" CDS complement(1869994..1870545) /gene="fliZ" /locus_tag="b1921" /gene_synonym="ECK1920" /gene_synonym="JW1906" /gene_synonym="yedH" /function="structural component; Unknown" /codon_start=1 /transl_table=11 /product="RpoS antagonist; putative regulator of FliA activity" /protein_id="AAC74988.2" /db_xref="GI:87082001" /db_xref="ASAP:ABE-0006394" /db_xref="UniProtKB/Swiss-Prot:P52627" /db_xref="EcoGene:EG11356" /translation="MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIV NKIEISRLDTLLDENGWQTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ HYQRQTCTRLVQKSSSLPSSDIY" gene complement(1870591..1871310) /gene="fliA" /locus_tag="b1922" /gene_synonym="ECK1921" /gene_synonym="flaD" /gene_synonym="JW1907" /gene_synonym="rpoF" /db_xref="EcoGene:EG11355" CDS complement(1870591..1871310) /gene="fliA" /locus_tag="b1922" /gene_synonym="ECK1921" /gene_synonym="flaD" /gene_synonym="JW1907" /gene_synonym="rpoF" /function="factor; Surface structures" /note="flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons; GO_component: GO:0019861 - flagellum; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 28 (sigma F) factor" /protein_id="AAC74989.1" /db_xref="GI:1788231" /db_xref="ASAP:ABE-0006396" /db_xref="UniProtKB/Swiss-Prot:P0AEM6" /db_xref="EcoGene:EG11355" /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE SRVSQLHSQAIKRLRTKLGKL" repeat_region 1871489..1871587 /note="RIP141 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(1871631..1873127) /gene="fliC" /locus_tag="b1923" /gene_synonym="ECK1922" /gene_synonym="flaF" /gene_synonym="H" /gene_synonym="hag" /gene_synonym="JW1908" /db_xref="EcoGene:EG10321" CDS complement(1871631..1873127) /gene="fliC" /locus_tag="b1923" /gene_synonym="ECK1922" /gene_synonym="flaF" /gene_synonym="H" /gene_synonym="hag" /gene_synonym="JW1908" /function="structural component; Surface structures" /note="flagellar biosynthesis; flagellin, filament structural protein; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar filament structural protein (flagellin)" /protein_id="AAC74990.1" /db_xref="GI:1788232" /db_xref="ASAP:ABE-0006402" /db_xref="UniProtKB/Swiss-Prot:P04949" /db_xref="EcoGene:EG10321" /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTG TNSESDLSSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDL KQIDAKTLGLDGFSVKNNDTVTTSAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNP ASIEGVYTDNGNDYYAKITGGDNDGKYYAVTVANDGTVTMATGATANATVTDANTTKA TTITSGGTPVQIDNTAGSATANLGAVSLVKLQDSKGNDTDTYALKDTNGNLYAADVNE TTGAVSVKTITYTDSSGAASSPTAVKLGGDDGKTEVVDIDGKTYDSADLNGGNLQTGL TAGGEALTAVANGKTTDPLKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLS EAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG" gene 1873393..1874799 /gene="fliD" /locus_tag="b1924" /gene_synonym="ECK1923" /gene_synonym="flbC" /gene_synonym="JW1909" /gene_synonym="rfs" /db_xref="EcoGene:EG10841" CDS 1873393..1874799 /gene="fliD" /locus_tag="b1924" /gene_synonym="ECK1923" /gene_synonym="flbC" /gene_synonym="JW1909" /gene_synonym="rfs" /function="putative structure; Surface structures" /note="flagellar biosynthesis; filament capping protein; enables filament assembly; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar filament capping protein" /protein_id="AAC74991.1" /db_xref="GI:1788233" /db_xref="ASAP:ABE-0006407" /db_xref="UniProtKB/Swiss-Prot:P24216" /db_xref="EcoGene:EG10841" /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL NSTSSYLTQQFENNSNSK" gene 1874824..1875234 /gene="fliS" /locus_tag="b1925" /gene_synonym="ECK1924" /gene_synonym="JW1910" /db_xref="EcoGene:EG11388" CDS 1874824..1875234 /gene="fliS" /locus_tag="b1925" /gene_synonym="ECK1924" /gene_synonym="JW1910" /function="regulator; Surface structures" /note="flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar protein potentiates polymerization" /protein_id="AAC74992.1" /db_xref="GI:1788234" /db_xref="ASAP:ABE-0006409" /db_xref="UniProtKB/Swiss-Prot:P26608" /db_xref="EcoGene:EG11388" /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRASL FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV" gene 1875234..1875599 /gene="fliT" /locus_tag="b1926" /gene_synonym="ECK1925" /gene_synonym="JW1911" /db_xref="EcoGene:EG11389" CDS 1875234..1875599 /gene="fliT" /locus_tag="b1926" /gene_synonym="ECK1925" /gene_synonym="JW1911" /function="regulator; Surface structures" /note="flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0006457 - protein folding; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="putative flagellar synthesis and assembly chaperone" /protein_id="AAC74993.1" /db_xref="GI:1788235" /db_xref="ASAP:ABE-0006411" /db_xref="UniProtKB/Swiss-Prot:P0ABY2" /db_xref="EcoGene:EG11389" /translation="MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAV QEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSV LSAYGDQGGFVLAPQDNLF" gene 1875677..1877164 /gene="amyA" /locus_tag="b1927" /gene_synonym="ECK1926" /gene_synonym="JW1912" /gene_synonym="yedC" /db_xref="EcoGene:EG11387" CDS 1875677..1877164 /gene="amyA" /locus_tag="b1927" /gene_synonym="ECK1926" /gene_synonym="JW1912" /gene_synonym="yedC" /EC_number="3.2.1.1" /function="enzyme; Degradation of polysaccharides" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0000272 - polysaccharide catabolic process" /codon_start=1 /transl_table=11 /product="cytoplasmic alpha-amylase" /protein_id="AAC74994.1" /db_xref="GI:1788236" /db_xref="ASAP:ABE-0006414" /db_xref="UniProtKB/Swiss-Prot:P26612" /db_xref="EcoGene:EG11387" /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA YKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVV VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEFPGCVVVMSNGDDGEKTIHLG ENYGNKTWRDFLGNRQERVVTDENGEATFFCNGGSVSVWVIEEVI" gene complement(1877198..1877611) /gene="yedD" /locus_tag="b1928" /gene_synonym="ECK1927" /gene_synonym="JW1913" /db_xref="EcoGene:EG11659" CDS complement(1877198..1877611) /gene="yedD" /locus_tag="b1928" /gene_synonym="ECK1927" /gene_synonym="JW1913" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC74995.1" /db_xref="GI:1788237" /db_xref="ASAP:ABE-0006416" /db_xref="UniProtKB/Swiss-Prot:P31063" /db_xref="EcoGene:EG11659" /translation="MKKLAIAGALLLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERD GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP" gene 1877798..1879003 /gene="yedE" /locus_tag="b1929" /gene_synonym="ECK1928" /gene_synonym="JW1914" /db_xref="EcoGene:EG11660" CDS 1877798..1879003 /gene="yedE" /locus_tag="b1929" /gene_synonym="ECK1928" /gene_synonym="JW1914" /function="putative transport; Not classified" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="UPF0394 family sulphur transport domain-containing inner membrane protein" /protein_id="AAC74996.1" /db_xref="GI:1788238" /db_xref="ASAP:ABE-0006422" /db_xref="UniProtKB/Swiss-Prot:P31064" /db_xref="EcoGene:EG11660" /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFAALMLIIGWEKRFFRRA APQTAKEIA" gene 1879000..1879233 /gene="yedF" /locus_tag="b1930" /gene_synonym="ECK1929" /gene_synonym="JW1915" /db_xref="EcoGene:EG11661" CDS 1879000..1879233 /gene="yedF" /locus_tag="b1930" /gene_synonym="ECK1929" /gene_synonym="JW1915" /codon_start=1 /transl_table=11 /product="putative TusA family sulfurtransferase" /protein_id="AAC74997.1" /db_xref="GI:1788239" /db_xref="ASAP:ABE-0006425" /db_xref="UniProtKB/Swiss-Prot:P0AA31" /db_xref="EcoGene:EG11661" /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP QSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK" gene 1879342..1880010 /gene="yedK" /locus_tag="b1931" /gene_synonym="ECK1930" /gene_synonym="JW1916" /gene_synonym="yedG" /db_xref="EcoGene:EG13278" CDS 1879342..1880010 /gene="yedK" /locus_tag="b1931" /gene_synonym="ECK1930" /gene_synonym="JW1916" /gene_synonym="yedG" /codon_start=1 /transl_table=11 /product="DUF159 family protein" /protein_id="AAT48139.1" /db_xref="GI:48994894" /db_xref="ASAP:ABE-0006428" /db_xref="UniProtKB/Swiss-Prot:P76318" /db_xref="EcoGene:EG13278" /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIH DRRPLVLSPEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAEL IQPV" gene 1880121..1880600 /gene="yedL" /locus_tag="b1932" /gene_synonym="ECK1931" /gene_synonym="JW1917" /db_xref="EcoGene:EG13279" CDS 1880121..1880600 /gene="yedL" /locus_tag="b1932" /gene_synonym="ECK1931" /gene_synonym="JW1917" /codon_start=1 /transl_table=11 /product="GNAT family putative N-acetyltransferase" /protein_id="AAC74999.1" /db_xref="GI:1788242" /db_xref="ASAP:ABE-0006433" /db_xref="UniProtKB/Swiss-Prot:P76319" /db_xref="EcoGene:EG13279" /translation="MFTIKTDDLTHPAVQALVAYHISGMLQQSPPESSHALDVQKLRN PTVTFWSVWEGEQLAGIGALKLLDDKHGELKSMRTAPNYLRRGVASLILRHILQVAQD RCLHRLSLETGTQAGFTACHQLYLKHGFADCEPFADYRLDPHSRFLSLTLCENNELP" gene complement(1880744..1881872) /gene="yedN" /locus_tag="b4495" /gene_synonym="ECK1932" /gene_synonym="JW1918" /gene_synonym="JW5912" /gene_synonym="yedM" /pseudo /db_xref="EcoGene:EG13281" CDS complement(join(1880744..1880878,1880884..1881561, 1881561..1881872)) /gene="yedN" /locus_tag="b4495" /gene_synonym="ECK1932" /gene_synonym="JW1918" /gene_synonym="JW5912" /gene_synonym="yedM" /note="pseudogene, IpaH/YopM family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006435" /db_xref="ASAP:ABE-0006437" /db_xref="ASAP:ABE-0006440" /db_xref="ASAP:ABE-0285096" /db_xref="UniProtKB/Swiss-Prot:P76321" /db_xref="EcoGene:EG13281" gene 1882023..1882184 /gene="intG" /locus_tag="b1936" /gene_synonym="ECK1934" /gene_synonym="JW5913" /pseudo /db_xref="EcoGene:EG14259" CDS 1882023..1882184 /gene="intG" /locus_tag="b1936" /gene_synonym="ECK1934" /gene_synonym="JW5913" /note="pseudogene, phage integrase family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006445" /db_xref="UniProtKB/Swiss-Prot:P76323" /db_xref="EcoGene:EG14259" gene complement(1882221..1882535) /gene="fliE" /locus_tag="b1937" /gene_synonym="ECK1935" /gene_synonym="flaAI" /gene_synonym="flaN" /gene_synonym="JW1921" /db_xref="EcoGene:EG11346" CDS complement(1882221..1882535) /gene="fliE" /locus_tag="b1937" /gene_synonym="ECK1935" /gene_synonym="flaAI" /gene_synonym="flaN" /gene_synonym="JW1921" /function="structural component; Surface structures" /note="flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar basal-body component" /protein_id="AAC75004.1" /db_xref="GI:1788247" /db_xref="ASAP:ABE-0006447" /db_xref="UniProtKB/Swiss-Prot:P0A8T5" /db_xref="EcoGene:EG11346" /translation="MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDR ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM QV" gene 1882750..1884408 /gene="fliF" /locus_tag="b1938" /gene_synonym="ECK1936" /gene_synonym="flaAII.1" /gene_synonym="flaBI" /gene_synonym="JW1922" /db_xref="EcoGene:EG11347" CDS 1882750..1884408 /gene="fliF" /locus_tag="b1938" /gene_synonym="ECK1936" /gene_synonym="flaAII.1" /gene_synonym="flaBI" /gene_synonym="JW1922" /function="structural component; Surface structures" /note="flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein; GO_component: GO:0019861 - flagellum; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar basal-body MS-ring and collar protein" /protein_id="AAC75005.1" /db_xref="GI:1788248" /db_xref="ASAP:ABE-0006454" /db_xref="UniProtKB/Swiss-Prot:P25798" /db_xref="EcoGene:EG11347" /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS LFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT QSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK PLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ LLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAVEVRLSKDE QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE" gene 1884401..1885396 /gene="fliG" /locus_tag="b1939" /gene_synonym="ECK1937" /gene_synonym="flaAII.2" /gene_synonym="flaBII" /gene_synonym="JW1923" /db_xref="EcoGene:EG11654" CDS 1884401..1885396 /gene="fliG" /locus_tag="b1939" /gene_synonym="ECK1937" /gene_synonym="flaAII.2" /gene_synonym="flaBII" /gene_synonym="JW1923" /function="structural component; Surface structures" /note="flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar motor switching and energizing component" /protein_id="AAC75006.1" /db_xref="GI:1788249" /db_xref="ASAP:ABE-0006456" /db_xref="UniProtKB/Swiss-Prot:P0ABZ1" /db_xref="EcoGene:EG11654" /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV" gene 1885389..1886075 /gene="fliH" /locus_tag="b1940" /gene_synonym="ECK1938" /gene_synonym="flaAII.3" /gene_synonym="flaBIII" /gene_synonym="JW1924" /db_xref="EcoGene:EG11656" CDS 1885389..1886075 /gene="fliH" /locus_tag="b1940" /gene_synonym="ECK1938" /gene_synonym="flaAII.3" /gene_synonym="flaBIII" /gene_synonym="JW1924" /function="transport; Surface structures" /note="flagellar biosynthesis; export of flagellar proteins?; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="negative regulator of FliI ATPase activity" /protein_id="AAC75007.2" /db_xref="GI:87082004" /db_xref="ASAP:ABE-0006458" /db_xref="UniProtKB/Swiss-Prot:P31068" /db_xref="EcoGene:EG11656" /translation="MSDNLPWKTWTPDDLAPPQAEFVPIVEPEETIIEEAEPSLEQQL AQLQMQAHEQGYQAGIAEGRQQGHKQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLV SEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE LCRLAAPGVV" gene 1886075..1887448 /gene="fliI" /locus_tag="b1941" /gene_synonym="ECK1939" /gene_synonym="flaC" /gene_synonym="JW1925" /db_xref="EcoGene:EG20266" CDS 1886075..1887448 /gene="fliI" /locus_tag="b1941" /gene_synonym="ECK1939" /gene_synonym="flaC" /gene_synonym="JW1925" /EC_number="3.6.3.14" /function="enzyme; Surface structures" /note="GO_component: GO:0019861 - flagellum; GO_process: GO:0015986 - ATP synthesis coupled proton transport" /codon_start=1 /transl_table=11 /product="flagellum-specific ATP synthase" /protein_id="AAC75008.1" /db_xref="GI:1788251" /db_xref="ASAP:ABE-0006460" /db_xref="UniProtKB/Swiss-Prot:P52612" /db_xref="EcoGene:EG20266" /translation="MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGL QLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAE GLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLD TGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKD FIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTR YAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDD QQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFK QLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLE RIFPTVS" gene 1887467..1887910 /gene="fliJ" /locus_tag="b1942" /gene_synonym="ECK1940" /gene_synonym="flaO" /gene_synonym="JW1926" /db_xref="EcoGene:EG20267" CDS 1887467..1887910 /gene="fliJ" /locus_tag="b1942" /gene_synonym="ECK1940" /gene_synonym="flaO" /gene_synonym="JW1926" /function="structural component; Surface structures" /note="flagellar fliJ protein; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar protein" /protein_id="AAC75009.1" /db_xref="GI:1788252" /db_xref="ASAP:ABE-0006462" /db_xref="UniProtKB/Swiss-Prot:P52613" /db_xref="EcoGene:EG20267" /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID YQNEYRNNLNSDMSAGITSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR EKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE" gene 1887907..1889034 /gene="fliK" /locus_tag="b1943" /gene_synonym="ECK1941" /gene_synonym="flaE" /gene_synonym="JW1927" /db_xref="EcoGene:EG20268" CDS 1887907..1889034 /gene="fliK" /locus_tag="b1943" /gene_synonym="ECK1941" /gene_synonym="flaE" /gene_synonym="JW1927" /function="structural component; Surface structures" /note="GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /protein_id="AAC75010.1" /db_xref="GI:1788253" /db_xref="ASAP:ABE-0006464" /db_xref="UniProtKB/Swiss-Prot:P52614" /db_xref="EcoGene:EG20268" /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD KAAPQLLVATDKPTTKGEPLISDIVSDAQQANLLIPVDETPPVINDEQSTSTPLTTAQ TMALAAVADKNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKP TLFTKLTSEQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ QQQSQRTANHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA" gene 1889139..1889603 /gene="fliL" /locus_tag="b1944" /gene_synonym="cheC1" /gene_synonym="ECK1942" /gene_synonym="flaAI" /gene_synonym="flaQI" /gene_synonym="JW1928" /db_xref="EcoGene:EG10322" CDS 1889139..1889603 /gene="fliL" /locus_tag="b1944" /gene_synonym="cheC1" /gene_synonym="ECK1942" /gene_synonym="flaAI" /gene_synonym="flaQI" /gene_synonym="JW1928" /function="putative structure; Surface structures" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein" /protein_id="AAC75011.1" /db_xref="GI:1788254" /db_xref="ASAP:ABE-0006467" /db_xref="UniProtKB/Swiss-Prot:P0ABX8" /db_xref="EcoGene:EG10322" /translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD KAQQRVVPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR" gene 1889608..1890612 /gene="fliM" /locus_tag="b1945" /gene_synonym="cheC2" /gene_synonym="ECK1943" /gene_synonym="flaA" /gene_synonym="flaAII" /gene_synonym="flaQII" /gene_synonym="JW1929" /db_xref="EcoGene:EG10323" CDS 1889608..1890612 /gene="fliM" /locus_tag="b1945" /gene_synonym="cheC2" /gene_synonym="ECK1943" /gene_synonym="flaA" /gene_synonym="flaAII" /gene_synonym="flaQII" /gene_synonym="JW1929" /function="structural component; Surface structures" /note="flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar motor switching and energizing component" /protein_id="AAC75012.1" /db_xref="GI:1788255" /db_xref="ASAP:ABE-0006469" /db_xref="UniProtKB/Swiss-Prot:P06974" /db_xref="EcoGene:EG10323" /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL KLNPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK " gene 1890609..1891022 /gene="fliN" /locus_tag="b1946" /gene_synonym="ECK1944" /gene_synonym="JW1930" /gene_synonym="motD" /db_xref="EcoGene:EG10324" CDS 1890609..1891022 /gene="fliN" /locus_tag="b1946" /gene_synonym="ECK1944" /gene_synonym="JW1930" /gene_synonym="motD" /function="structural component; Surface structures" /note="flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar motor switching and energizing component" /protein_id="AAC75013.1" /db_xref="GI:1788256" /db_xref="ASAP:ABE-0006471" /db_xref="UniProtKB/Swiss-Prot:P15070" /db_xref="EcoGene:EG10324" /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGG GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR" gene 1891025..1891390 /gene="fliO" /locus_tag="b1947" /gene_synonym="ECK1945" /gene_synonym="flbD" /gene_synonym="JW5316" /db_xref="EcoGene:EG11224" CDS 1891025..1891390 /gene="fliO" /locus_tag="b1947" /gene_synonym="ECK1945" /gene_synonym="flbD" /gene_synonym="JW5316" /function="putative structure; Surface structures" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein" /protein_id="AAC75014.2" /db_xref="GI:87082005" /db_xref="ASAP:ABE-0006473" /db_xref="UniProtKB/Swiss-Prot:P22586" /db_xref="EcoGene:EG11224" /translation="MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGF APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI PQTDFQSVMKNLLKRSGRS" gene 1891390..1892127 /gene="fliP" /locus_tag="b1948" /gene_synonym="ECK1946" /gene_synonym="flaR" /gene_synonym="JW1932" /db_xref="EcoGene:EG11975" CDS 1891390..1892127 /gene="fliP" /locus_tag="b1948" /gene_synonym="ECK1946" /gene_synonym="flaR" /gene_synonym="JW1932" /function="putative structure; Surface structures" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009296 - flagellum assembly; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein" /protein_id="AAC75015.1" /db_xref="GI:1788259" /db_xref="ASAP:ABE-0006475" /db_xref="UniProtKB/Swiss-Prot:P0AC05" /db_xref="EcoGene:EG11975" /translation="MRRLLSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQT LVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMS PVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQ GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIA LPFKLMLFVLVDGWQLLVGSLAQSFYS" gene 1892137..1892406 /gene="fliQ" /locus_tag="b1949" /gene_synonym="ECK1947" /gene_synonym="flaQ" /gene_synonym="JW1933" /db_xref="EcoGene:EG11976" CDS 1892137..1892406 /gene="fliQ" /locus_tag="b1949" /gene_synonym="ECK1947" /gene_synonym="flaQ" /gene_synonym="JW1933" /function="putative structure; Surface structures" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009101 - glycoprotein biosynthetic process; GO_process: GO:0009296 - flagellum assembly" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein" /protein_id="AAC75016.1" /db_xref="GI:1788260" /db_xref="ASAP:ABE-0006477" /db_xref="UniProtKB/Swiss-Prot:P0AC07" /db_xref="EcoGene:EG11976" /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG" gene 1892414..1893199 /gene="fliR" /locus_tag="b1950" /gene_synonym="ECK1948" /gene_synonym="flaP" /gene_synonym="JW1934" /db_xref="EcoGene:EG11977" CDS 1892414..1893199 /gene="fliR" /locus_tag="b1950" /gene_synonym="ECK1948" /gene_synonym="flaP" /gene_synonym="JW1934" /function="putative enzyme; Surface structures" /note="flagellar biosynthesis; GO_component: GO:0019861 - flagellum; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="flagellar export pore protein" /protein_id="AAC75017.1" /db_xref="GI:1788261" /db_xref="ASAP:ABE-0006479" /db_xref="UniProtKB/Swiss-Prot:P33135" /db_xref="EcoGene:EG11977" /translation="MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKL GLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF PLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI" gene 1893489..1894112 /gene="rcsA" /locus_tag="b1951" /gene_synonym="cpsR" /gene_synonym="ECK1949" /gene_synonym="JW1935" /db_xref="EcoGene:EG10820" CDS 1893489..1894112 /gene="rcsA" /locus_tag="b1951" /gene_synonym="cpsR" /gene_synonym="ECK1949" /gene_synonym="JW1935" /function="regulator; Surface polysaccharides & antigens" /note="positive regulator for ctr capsule biosynthesis, positive transcription factor; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009248 - K antigen biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional regulator of colanic acid capsular biosynthesis" /protein_id="AAC75018.1" /db_xref="GI:1788262" /db_xref="ASAP:ABE-0006482" /db_xref="UniProtKB/Swiss-Prot:P69405" /db_xref="EcoGene:EG10820" /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD SQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR" gene complement(1894156..1894344) /gene="dsrB" /locus_tag="b1952" /gene_synonym="ECK1950" /gene_synonym="JW1936" /db_xref="EcoGene:EG12636" CDS complement(1894156..1894344) /gene="dsrB" /locus_tag="b1952" /gene_synonym="ECK1950" /gene_synonym="JW1936" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75019.1" /db_xref="GI:1788263" /db_xref="ASAP:ABE-0006484" /db_xref="UniProtKB/Swiss-Prot:P0AEG8" /db_xref="EcoGene:EG12636" /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGI WFFNEAGHQDGIFVEKAE" gene 1894507..1894734 /gene="yodD" /locus_tag="b1953" /gene_synonym="ECK1951" /gene_synonym="JW5317" /db_xref="EcoGene:EG14387" CDS 1894507..1894734 /gene="yodD" /locus_tag="b1953" /gene_synonym="ECK1951" /gene_synonym="JW5317" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75020.2" /db_xref="GI:87082006" /db_xref="ASAP:ABE-0006488" /db_xref="UniProtKB/Swiss-Prot:P64519" /db_xref="EcoGene:EG14387" /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHV SVDGREYHTWRELADAFELDIHDFSVSEVNR" gene complement(1894748..1894834) /gene="dsrA" /locus_tag="b1954" /gene_synonym="ECK1952" /gene_synonym="IS095" /gene_synonym="JWR0036" /db_xref="EcoGene:EG31118" ncRNA complement(1894748..1894834) /ncRNA_class="antisense_RNA" /gene="dsrA" /locus_tag="b1954" /gene_synonym="ECK1952" /gene_synonym="IS095" /gene_synonym="JWR0036" /product="sRNA antisense regulator enhances translation of RpoS, Hfq-dependent" /note="silencer of rcsA gene, interacts with rpoS translation; component of acid resistance regulatory circuit" /function="2.2.7 information transfer; RNA related; antisense RNA" /function="3.1.3.6 regulation; type of regulation; posttranscriptional; antisense RNA" /function="6.3 cell structure; surface antigens (ECA, O antigen of LPS)" /function="7.1 location of gene products; cytoplasm" /function="regulatory RNA; regulates transcriptional silencing by H-NS protein, and enhances translation of RpoS" /function="RNA; Surface polysaccharides & antigens" /db_xref="ASAP:ABE-0006490" /db_xref="EcoGene:EG31118" gene 1895032..1895847 /gene="yedP" /locus_tag="b1955" /gene_synonym="ECK1953" /gene_synonym="JW1938" /db_xref="EcoGene:EG14039" CDS 1895032..1895847 /gene="yedP" /locus_tag="b1955" /gene_synonym="ECK1953" /gene_synonym="JW1938" /codon_start=1 /transl_table=11 /product="putative mannosyl-3-phosphoglycerate phosphatase" /protein_id="AAC75021.1" /db_xref="GI:1788265" /db_xref="ASAP:ABE-0006493" /db_xref="UniProtKB/Swiss-Prot:P76329" /db_xref="EcoGene:EG14039" /translation="MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVI LCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISL VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPND APLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR" gene complement(1895844..1897538) /gene="yedQ" /locus_tag="b1956" /gene_synonym="ECK1954" /gene_synonym="JW5832" /db_xref="EcoGene:EG14040" CDS complement(1895844..1897538) /gene="yedQ" /locus_tag="b1956" /gene_synonym="ECK1954" /gene_synonym="JW5832" /codon_start=1 /transl_table=11 /product="putative membrane-anchored diguanylate cyclase" /protein_id="AAC75022.2" /db_xref="GI:87082007" /db_xref="ASAP:ABE-0006495" /db_xref="UniProtKB/Swiss-Prot:P76330" /db_xref="EcoGene:EG14040" /translation="MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWRE VVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAV TEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLD GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA" gene complement(1897709..1897891) /gene="yodC" /locus_tag="b1957" /gene_synonym="ECK1955" /gene_synonym="JW1940" /db_xref="EcoGene:EG14307" CDS complement(1897709..1897891) /gene="yodC" /locus_tag="b1957" /gene_synonym="ECK1955" /gene_synonym="JW1940" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75023.1" /db_xref="GI:1788267" /db_xref="ASAP:ABE-0006498" /db_xref="UniProtKB/Swiss-Prot:P64517" /db_xref="EcoGene:EG14307" /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH ETELVPGEGSRSAEEV" gene complement(1897970..1898887) /gene="yedI" /locus_tag="b1958" /gene_synonym="ECK1956" /gene_synonym="JW1941" /db_xref="EcoGene:EG12709" CDS complement(1897970..1898887) /gene="yedI" /locus_tag="b1958" /gene_synonym="ECK1956" /gene_synonym="JW1941" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF808 family inner membrane protein" /protein_id="AAC75024.1" /db_xref="GI:1788268" /db_xref="ASAP:ABE-0006500" /db_xref="UniProtKB/Swiss-Prot:P46125" /db_xref="EcoGene:EG12709" /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT VLNLILGFIIGGIVVLGVKAVEKMRGQAH" gene 1899060..1899980 /gene="yedA" /locus_tag="b1959" /gene_synonym="ECK1957" /gene_synonym="JW1942" /db_xref="EcoGene:EG11141" CDS 1899060..1899980 /gene="yedA" /locus_tag="b1959" /gene_synonym="ECK1957" /gene_synonym="JW1942" /function="putative membrane; Not classified" /note="putative transmembrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="amino acid exporter for phenylalanine, threonine" /protein_id="AAC75025.1" /db_xref="GI:1788269" /db_xref="ASAP:ABE-0006505" /db_xref="UniProtKB/Swiss-Prot:P0AA70" /db_xref="EcoGene:EG11141" /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF LAAGILLLAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI VFAVVLVTLGKYLFPAKPVVAPVIQDASSE" gene complement(1899969..1900439) /gene="vsr" /locus_tag="b1960" /gene_synonym="ECK1958" /gene_synonym="JW1943" /db_xref="EcoGene:EG11068" CDS complement(1899969..1900439) /gene="vsr" /locus_tag="b1960" /gene_synonym="ECK1958" /gene_synonym="JW1943" /EC_number="3.1.-.-" /function="enzyme; Degradation of DNA" /note="DNA mismatch endonuclease, patch repair protein; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="DNA mismatch endonuclease of very short patch repair" /protein_id="AAC75026.1" /db_xref="GI:1788270" /db_xref="ASAP:ABE-0006507" /db_xref="UniProtKB/Swiss-Prot:P09184" /db_xref="EcoGene:EG11068" /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA SLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA" gene complement(1900420..1901838) /gene="dcm" /locus_tag="b1961" /gene_synonym="ECK1959" /gene_synonym="JW1944" /gene_synonym="mec" /db_xref="EcoGene:EG10211" CDS complement(1900420..1901838) /gene="dcm" /locus_tag="b1961" /gene_synonym="ECK1959" /gene_synonym="JW1944" /gene_synonym="mec" /EC_number="2.1.1.37" /function="enzyme; DNA - replication, repair, restriction/modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006306 - DNA methylation" /codon_start=1 /transl_table=11 /product="DNA cytosine methyltransferase" /protein_id="AAC75027.1" /db_xref="GI:1788271" /db_xref="ASAP:ABE-0006509" /db_xref="UniProtKB/Swiss-Prot:P0AED9" /db_xref="EcoGene:EG10211" /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDP LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL EPKIKQAVALRQQEAQHGRRSR" gene complement(1901905..1902600) /gene="yedJ" /locus_tag="b1962" /gene_synonym="ECK1960" /gene_synonym="JW1945" /db_xref="EcoGene:EG12710" CDS complement(1901905..1902600) /gene="yedJ" /locus_tag="b1962" /gene_synonym="ECK1960" /gene_synonym="JW1945" /codon_start=1 /transl_table=11 /product="putative HD superfamily phosphohydrolase" /protein_id="AAC75028.1" /db_xref="GI:1788273" /db_xref="ASAP:ABE-0006512" /db_xref="UniProtKB/Swiss-Prot:P46144" /db_xref="EcoGene:EG12710" /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH AIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG VDHKVIDAFSSAG" gene complement(1902640..1903005) /gene="yedR" /locus_tag="b1963" /gene_synonym="ECK1961" /gene_synonym="JW1946" /db_xref="EcoGene:EG14041" CDS complement(1902640..1903005) /gene="yedR" /locus_tag="b1963" /gene_synonym="ECK1961" /gene_synonym="JW1946" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC75029.2" /db_xref="GI:87082008" /db_xref="ASAP:ABE-0006514" /db_xref="UniProtKB/Swiss-Prot:P76334" /db_xref="EcoGene:EG14041" /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL LGSIAWYTRPRPARSRRYE" gene 1903170..1903260 /gene="rseX" /locus_tag="b4603" /gene_synonym="ECK4412" /gene_synonym="IS96" /db_xref="EcoGene:EG31170" ncRNA 1903170..1903260 /ncRNA_class="antisense_RNA" /gene="rseX" /locus_tag="b4603" /gene_synonym="ECK4412" /gene_synonym="IS96" /product="sRNA antisense regulator of ompA and ompC translation, Hfq-dependent" /db_xref="EcoGene:EG31170" gene 1903572..1904764 /gene="yedS" /locus_tag="b4496" /gene_synonym="ECK1962" /gene_synonym="JW1948" /gene_synonym="JW1949" /gene_synonym="JW5319" /gene_synonym="yedT" /pseudo /db_xref="EcoGene:EG14042" CDS join(1903572..1904234,1904234..1904764) /gene="yedS" /locus_tag="b4496" /gene_synonym="ECK1962" /gene_synonym="JW1948" /gene_synonym="JW1949" /gene_synonym="JW5319" /gene_synonym="yedT" /note="pseudogene, outer membrane protein homology; putative outer membrane protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006518" /db_xref="ASAP:ABE-0006521" /db_xref="ASAP:ABE-0006526" /db_xref="ASAP:ABE-0285097" /db_xref="UniProtKB/Swiss-Prot:P76335" /db_xref="EcoGene:EG14042" gene 1905356..1906207 /gene="hchA" /locus_tag="b1967" /gene_synonym="ECK1963" /gene_synonym="gloC" /gene_synonym="JW1950" /gene_synonym="yedU" /gene_synonym="yzzC" /db_xref="EcoGene:EG11755" CDS 1905356..1906207 /gene="hchA" /locus_tag="b1967" /gene_synonym="ECK1963" /gene_synonym="gloC" /gene_synonym="JW1950" /gene_synonym="yedU" /gene_synonym="yzzC" /codon_start=1 /transl_table=11 /product="glyoxalase III and Hsp31 molecular chaperone" /protein_id="AAC75033.1" /db_xref="GI:1788278" /db_xref="ASAP:ABE-0006529" /db_xref="UniProtKB/Swiss-Prot:P31658" /db_xref="EcoGene:EG11755" /translation="MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKP YRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMT KFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIG LPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTP EIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQE MLAAYAG" gene complement(1906315..1907673) /gene="yedV" /locus_tag="b1968" /gene_synonym="ECK1964" /gene_synonym="JW1951" /db_xref="EcoGene:EG14044" CDS complement(1906315..1907673) /gene="yedV" /locus_tag="b1968" /gene_synonym="ECK1964" /gene_synonym="JW1951" /function="putative regulator; Not classified" /note="putative 2-component sensor protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="putative sensory kinase in two-component regulatory system with YedW" /protein_id="AAC75034.1" /db_xref="GI:1788279" /db_xref="ASAP:ABE-0006531" /db_xref="UniProtKB/Swiss-Prot:P76339" /db_xref="EcoGene:EG14044" /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLN NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL GQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTK INEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQ RN" gene complement(1907673..1908344) /gene="yedW" /locus_tag="b1969" /gene_synonym="ECK1965" /gene_synonym="JW5322" /db_xref="EcoGene:EG14045" CDS complement(1907673..1908344) /gene="yedW" /locus_tag="b1969" /gene_synonym="ECK1965" /gene_synonym="JW5322" /function="putative regulator; Not classified" /note="putative 2-component transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator family protein" /protein_id="AAC75035.2" /db_xref="GI:87082012" /db_xref="ASAP:ABE-0006533" /db_xref="UniProtKB/Swiss-Prot:P76340" /db_xref="EcoGene:EG14045" /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLA SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF VAVKK" gene 1908477..1908890 /gene="hiuH" /locus_tag="b1970" /gene_synonym="ECK1966" /gene_synonym="JW1953" /gene_synonym="yedX" /db_xref="EcoGene:EG14046" CDS 1908477..1908890 /gene="hiuH" /locus_tag="b1970" /gene_synonym="ECK1966" /gene_synonym="JW1953" /gene_synonym="yedX" /function="enzyme; Purine catabolism" /codon_start=1 /transl_table=11 /product="hydroxyisourate hydrolase" /protein_id="AAC75036.1" /db_xref="GI:1788281" /db_xref="ASAP:ABE-0006537" /db_xref="UniProtKB/Swiss-Prot:P76341" /db_xref="EcoGene:EG14046" /translation="MLKRYLVLSVATAAFSLPSLVNAAQQNILSVHILNQQTGKPAAD VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS" gene 1908999..1910003 /gene="yedY" /locus_tag="b1971" /gene_synonym="ECK1967" /gene_synonym="JW1954" /db_xref="EcoGene:EG14047" CDS 1908999..1910003 /gene="yedY" /locus_tag="b1971" /gene_synonym="ECK1967" /gene_synonym="JW1954" /function="putative enzyme; Not classified" /note="putative reductase" /codon_start=1 /transl_table=11 /product="membrane-anchored, periplasmic TMAO, DMSO reductase" /protein_id="AAC75037.1" /db_xref="GI:1788282" /db_xref="ASAP:ABE-0006540" /db_xref="UniProtKB/Swiss-Prot:P76342" /db_xref="EcoGene:EG14047" /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISATALSLPHAAHA DLLSWFKGNDRPPAPAGKALEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAA NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG FYANVNPYVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYAAQVASLYRGLDLRENF " gene 1910004..1910639 /gene="yedZ" /locus_tag="b1972" /gene_synonym="ECK1968" /gene_synonym="JW1955" /db_xref="EcoGene:EG14048" CDS 1910004..1910639 /gene="yedZ" /locus_tag="b1972" /gene_synonym="ECK1968" /gene_synonym="JW1955" /codon_start=1 /transl_table=11 /product="inner membrane heme subunit for periplasmic YedYZ reductase" /protein_id="AAC75038.1" /db_xref="GI:1788283" /db_xref="ASAP:ABE-0006542" /db_xref="UniProtKB/Swiss-Prot:P76343" /db_xref="EcoGene:EG14048" /translation="MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQ HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV" repeat_region 1910673..1910706 /note="REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 1910896..1911546 /gene="zinT" /locus_tag="b1973" /gene_synonym="ECK1969" /gene_synonym="JW1956" /gene_synonym="yodA" /db_xref="EcoGene:EG14049" CDS 1910896..1911546 /gene="zinT" /locus_tag="b1973" /gene_synonym="ECK1969" /gene_synonym="JW1956" /gene_synonym="yodA" /codon_start=1 /transl_table=11 /product="zinc and cadmium binding protein, periplasmic" /protein_id="AAC75039.1" /db_xref="GI:1788284" /db_xref="ASAP:ABE-0006546" /db_xref="UniProtKB/Swiss-Prot:P76344" /db_xref="EcoGene:EG14049" /translation="MAIRLYKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH" gene 1911889..1912419 /gene="yodB" /locus_tag="b1974" /gene_synonym="ECK1970" /gene_synonym="JW5323" /db_xref="EcoGene:EG14050" CDS 1911889..1912419 /gene="yodB" /locus_tag="b1974" /gene_synonym="ECK1970" /gene_synonym="JW5323" /function="putative enzyme; Not classified" /note="cytochrome b561 homolog 1; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="cytochrome b561 homolog" /protein_id="AAC75040.2" /db_xref="GI:87082013" /db_xref="ASAP:ABE-0006552" /db_xref="UniProtKB/Swiss-Prot:P76345" /db_xref="EcoGene:EG14050" /translation="MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRE THYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLG IALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHH YIQKDNTLLRMMPRRK" gene complement(1912989..1913078) /gene="serU" /locus_tag="b1975" /gene_synonym="ECK1971" /gene_synonym="ftsM" /gene_synonym="JWR0037" /gene_synonym="Su-1" /gene_synonym="su1" /gene_synonym="supD" /gene_synonym="supH" /db_xref="EcoGene:EG30094" tRNA complement(1912989..1913078) /gene="serU" /locus_tag="b1975" /gene_synonym="ECK1971" /gene_synonym="ftsM" /gene_synonym="JWR0037" /gene_synonym="Su-1" /gene_synonym="su1" /gene_synonym="supD" /gene_synonym="supH" /product="tRNA-Ser" /note="anticodon: CGA" /db_xref="ASAP:ABE-0006554" /db_xref="EcoGene:EG30094" gene 1913172..1913969 /gene="mtfA" /locus_tag="b1976" /gene_synonym="ECK1972" /gene_synonym="JW1958" /gene_synonym="yeeI" /db_xref="EcoGene:EG13377" CDS 1913172..1913969 /gene="mtfA" /locus_tag="b1976" /gene_synonym="ECK1972" /gene_synonym="JW1958" /gene_synonym="yeeI" /codon_start=1 /transl_table=11 /product="anti-repressor for DgsA(Mlc)" /protein_id="AAC75041.2" /db_xref="GI:87082014" /db_xref="ASAP:ABE-0006558" /db_xref="UniProtKB/Swiss-Prot:P76346" /db_xref="EcoGene:EG13377" /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH" gene 1914070..1914145 /gene="asnT" /locus_tag="b1977" /gene_synonym="ECK1973" /gene_synonym="JWR0038" /db_xref="EcoGene:EG30020" tRNA 1914070..1914145 /gene="asnT" /locus_tag="b1977" /gene_synonym="ECK1973" /gene_synonym="JWR0038" /product="tRNA-Asn" /note="anticodon: GUU" /db_xref="ASAP:ABE-0006560" /db_xref="EcoGene:EG30020" gene 1914459..1921535 /gene="yeeJ" /locus_tag="b1978" /gene_synonym="ECK1974" /gene_synonym="JW5833" /db_xref="EcoGene:EG13378" CDS 1914459..1921535 /gene="yeeJ" /locus_tag="b1978" /gene_synonym="ECK1974" /gene_synonym="JW5833" /function="putative factor; Not classified" /note="putative factor; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative adhesin" /protein_id="AAC75042.4" /db_xref="GI:145693153" /db_xref="ASAP:ABE-0006563" /db_xref="UniProtKB/Swiss-Prot:P76347" /db_xref="EcoGene:EG13378" /translation="MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAA AQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTF ARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQ AANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLF FSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYL KLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDE VALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAM QKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLV SSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTA EDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPV VGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAV VNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNV KPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKI ATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTD VNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGN DSVTMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYR VTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQYMTATLQDKNGNPLK DKEITFSVPNDVASKFSISNGGKGMTDSNGVAIASLTGTLAGTHMIMARLANSNVSDA QPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITVNFTMPQDV AANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFVADKASA QVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVSNTNE SGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIELAPVPDSIIAGT PQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTNEQGKATVTYTNT RSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALFDTVSAGETTSLY IEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASFTATKAGVYQLTA TLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTE VTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTASMTGGKSEQLVVN FIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTFTLPADVSASF TLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIADAGTAKLAS LTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEI LVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVK AHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKAS LPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSV TPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSST AHVASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVT DQNGIATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGD YTDSAELRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTG GGEGIATLIPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGA YYQLNNDNFAPGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSY VYEIRVKSWWVNAGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDM GHYTTDAGFQSNMYWSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL" gene complement(1921797..1922849) /gene="yeeL" /locus_tag="b4497" /gene_synonym="ECK1975" /gene_synonym="JW1961" /gene_synonym="JW5325" /gene_synonym="yeeK" /pseudo /db_xref="EcoGene:EG13380" CDS complement(1921797..1922849) /gene="yeeL" /locus_tag="b4497" /gene_synonym="ECK1975" /gene_synonym="JW1961" /gene_synonym="JW5325" /gene_synonym="yeeK" /note="pseudogene, glycosyltransferase homology" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006565" /db_xref="ASAP:ABE-0006568" /db_xref="ASAP:ABE-0285098" /db_xref="UniProtKB/Swiss-Prot:P76349" /db_xref="EcoGene:EG13380" gene 1923164..1924480 /gene="shiA" /locus_tag="b1981" /gene_synonym="ECK1976" /gene_synonym="JW1962" /gene_synonym="yeeM" /db_xref="EcoGene:EG20205" CDS 1923164..1924480 /gene="shiA" /locus_tag="b1981" /gene_synonym="ECK1976" /gene_synonym="JW1962" /gene_synonym="yeeM" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="shikimate transporter" /protein_id="AAC75045.1" /db_xref="GI:1788292" /db_xref="ASAP:ABE-0006572" /db_xref="UniProtKB/Swiss-Prot:P76350" /db_xref="EcoGene:EG20205" /translation="MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGIT AALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVW MMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKA FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNG MEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNY STQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGTLIGTLSAFPFF MALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVG GGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLMKDSQRA" gene 1924582..1926036 /gene="amn" /locus_tag="b1982" /gene_synonym="ECK1977" /gene_synonym="JW1963" /db_xref="EcoGene:EG10039" CDS 1924582..1926036 /gene="amn" /locus_tag="b1982" /gene_synonym="ECK1977" /gene_synonym="JW1963" /EC_number="3.2.2.4" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 2690948" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="AMP nucleosidase" /protein_id="AAC75046.1" /db_xref="GI:1788293" /db_xref="ASAP:ABE-0006579" /db_xref="UniProtKB/Swiss-Prot:P0AE12" /db_xref="EcoGene:EG10039" /translation="MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDE NARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLT LLYQDYGAHISVQPSQHEIPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETAD GIYHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGC SQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLV NIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAV LPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASAL RFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAIS EHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR" gene 1926379..1927095 /gene="yeeN" /locus_tag="b1983" /gene_synonym="ECK1978" /gene_synonym="JW1964" /db_xref="EcoGene:EG13382" CDS 1926379..1927095 /gene="yeeN" /locus_tag="b1983" /gene_synonym="ECK1978" /gene_synonym="JW1964" /codon_start=1 /transl_table=11 /product="UPF0082 family protein" /protein_id="AAC75047.1" /db_xref="GI:1788294" /db_xref="ASAP:ABE-0006582" /db_xref="UniProtKB/Swiss-Prot:P0A8A2" /db_xref="EcoGene:EG13382" /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRD VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL VDALEDDDDVQKVYHNVANL" gene complement(1927548..1927623) /gene="asnW" /locus_tag="b1984" /gene_synonym="ECK1979" /gene_synonym="JWR0039" /db_xref="EcoGene:EG31120" tRNA complement(1927548..1927623) /gene="asnW" /locus_tag="b1984" /gene_synonym="ECK1979" /gene_synonym="JWR0039" /product="tRNA-Asn" /note="anticodon: GUU" /db_xref="ASAP:ABE-0006584" /db_xref="EcoGene:EG31120" gene complement(1927724..1929211) /gene="yeeO" /locus_tag="b1985" /gene_synonym="ECK1980" /gene_synonym="JW1965" /db_xref="EcoGene:EG13383" CDS complement(1927724..1929211) /gene="yeeO" /locus_tag="b1985" /gene_synonym="ECK1980" /gene_synonym="JW1965" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative multdrug exporter, MATE family" /protein_id="AAC75048.2" /db_xref="GI:226510954" /db_xref="ASAP:ABE-0006586" /db_xref="UniProtKB/Swiss-Prot:P76352" /db_xref="EcoGene:EG13383" /translation="MWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITP LAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVV VAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALA LTYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSW PGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIG IPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITG RRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILI WLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVG VWMGMFADWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKPVVSE" gene 1929372..1929447 /gene="asnU" /locus_tag="b1986" /gene_synonym="ECK1981" /gene_synonym="JWR0040" /db_xref="EcoGene:EG30021" tRNA 1929372..1929447 /gene="asnU" /locus_tag="b1986" /gene_synonym="ECK1981" /gene_synonym="JWR0040" /product="tRNA-Asn" /note="anticodon: GUU" /db_xref="ASAP:ABE-0006588" /db_xref="EcoGene:EG30021" gene complement(1929485..1930435) /gene="cbl" /locus_tag="b1987" /gene_synonym="ECK1982" /gene_synonym="JW1966" /db_xref="EcoGene:EG14264" CDS complement(1929485..1930435) /gene="cbl" /locus_tag="b1987" /gene_synonym="ECK1982" /gene_synonym="JW1966" /function="regulator; Amino acid biosynthesis: Cysteine" /note="transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0019344 - cysteine biosynthetic process; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="ssuEADCB/tauABCD operon transcriptional activator" /protein_id="AAC75049.1" /db_xref="GI:1788296" /db_xref="ASAP:ABE-0006590" /db_xref="UniProtKB/Swiss-Prot:Q47083" /db_xref="EcoGene:EG14264" /translation="MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEL GIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHT QARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVA FPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLA DIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKR GQLQRNYVWRFLELCNAGLSVEDIKRQVMESSEEEIDYQI" gene complement(1930537..1931454) /gene="nac" /locus_tag="b1988" /gene_synonym="ECK1983" /gene_synonym="JW1967" /db_xref="EcoGene:EG14265" CDS complement(1930537..1931454) /gene="nac" /locus_tag="b1988" /gene_synonym="ECK1983" /gene_synonym="JW1967" /function="regulator; Central intermediary metabolism" /note="nitrogen assimilation control protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="nitrogen assimilation regulon transcriptional regulator; autorepressor" /protein_id="AAC75050.1" /db_xref="GI:1788297" /db_xref="ASAP:ABE-0006594" /db_xref="UniProtKB/Swiss-Prot:Q47005" /db_xref="EcoGene:EG14265" /translation="MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELN QQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTA ASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQA LLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGE IESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANL SPQAQAVKELLMSVISSPVMEKRQWQLVS" gene 1931781..1931856 /gene="asnV" /locus_tag="b1989" /gene_synonym="ECK1984" /gene_synonym="JWR0041" /db_xref="EcoGene:EG30022" tRNA 1931781..1931856 /gene="asnV" /locus_tag="b1989" /gene_synonym="ECK1984" /gene_synonym="JWR0041" /product="tRNA-Asn" /note="anticodon: GUU" /db_xref="ASAP:ABE-0006605" /db_xref="EcoGene:EG30022" gene complement(1931912..1932844) /gene="ldtA" /locus_tag="b1990" /gene_synonym="ECK1985" /gene_synonym="erfK" /gene_synonym="JW1968" /gene_synonym="srfK" /gene_synonym="yeeG" /gene_synonym="yzzT" /db_xref="EcoGene:EG12682" CDS complement(1931912..1932844) /gene="ldtA" /locus_tag="b1990" /gene_synonym="ECK1985" /gene_synonym="erfK" /gene_synonym="JW1968" /gene_synonym="srfK" /gene_synonym="yeeG" /gene_synonym="yzzT" /function="enzyme; Murein sacculus, peptidoglycan" /codon_start=1 /transl_table=11 /product="L,D-transpeptidase linking Lpp to murein" /protein_id="AAC75051.1" /db_xref="GI:1788299" /db_xref="ASAP:ABE-0006607" /db_xref="UniProtKB/Swiss-Prot:P39176" /db_xref="EcoGene:EG12682" /translation="MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPD HNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNV AEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAK RGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYL FDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRA FINGQEVDVNRANAALQRRSGMPVQISSGSRQMF" gene complement(1932909..1933988) /gene="cobT" /locus_tag="b1991" /gene_synonym="ECK1986" /gene_synonym="JW1969" /db_xref="EcoGene:EG12151" CDS complement(1932909..1933988) /gene="cobT" /locus_tag="b1991" /gene_synonym="ECK1986" /gene_synonym="JW1969" /EC_number="2.4.2.21" /function="enzyme; Biosynthesis of cofactors, carriers: Cobalamin" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase" /protein_id="AAC75052.1" /db_xref="GI:1788300" /db_xref="ASAP:ABE-0006611" /db_xref="UniProtKB/Swiss-Prot:P36562" /db_xref="EcoGene:EG12151" /translation="MQILADLLNTIPAIDSTAMSRAQRHIDGLLKPVGSLGKLEVLAI QLAGMPGLNGIPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVL AEQAGANVHVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYT QELAKNGVTLFGVGELGMANTTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVV RRAITLNQPNPQDGVDVLAKVGGFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAAC QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA IYNNMGELAASNIVLPGNTTSDLNS" gene complement(1934000..1934743) /gene="cobS" /locus_tag="b1992" /gene_synonym="ECK1987" /gene_synonym="JW1970" /db_xref="EcoGene:EG12150" CDS complement(1934000..1934743) /gene="cobS" /locus_tag="b1992" /gene_synonym="ECK1987" /gene_synonym="JW1970" /EC_number="2.-.-.-" /function="enzyme; Biosynthesis of cofactors, carriers: Cobalamin" /codon_start=1 /transl_table=11 /product="cobalamin synthase" /protein_id="AAC75053.1" /db_xref="GI:1788301" /db_xref="ASAP:ABE-0006613" /db_xref="UniProtKB/Swiss-Prot:P36561" /db_xref="EcoGene:EG12150" /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL GAISGLVFMVLQAWCGAPLAALFSVLVLVLMTGGFHLDGLADTCDGVFSARSRDRMLE IMRDSRLGTHGGLALIFVVLAKILVLSELALRGESILASLAAACAVSRGTAALLMYRH RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL LKRTLGGQTGDTLGAAIELGELVFLLALL" gene complement(1934740..1935285) /gene="cobU" /locus_tag="b1993" /gene_synonym="ECK1988" /gene_synonym="JW1971" /db_xref="EcoGene:EG13238" CDS complement(1934740..1935285) /gene="cobU" /locus_tag="b1993" /gene_synonym="ECK1988" /gene_synonym="JW1971" /function="enzyme; Biosynthesis of cofactors, carriers: Cobalamin" /note="cobinamide kinase/cobinamide phosphate guanylyltransferase" /codon_start=1 /transl_table=11 /product="cobinamide kinase and cobinamide phosphate guanylyltransferase" /protein_id="AAC75054.1" /db_xref="GI:1788302" /db_xref="ASAP:ABE-0006616" /db_xref="UniProtKB/Swiss-Prot:P0AE76" /db_xref="EcoGene:EG13238" /translation="MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARI EHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDE WDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQ QLAAAANEVWLVVSGIGVKIK" gene complement(1935589..1935675) /gene="yeeH" /locus_tag="b4639" /gene_synonym="ECK4437" /pseudo /db_xref="EcoGene:EG13239" CDS complement(1935589..1935675) /gene="yeeH" /locus_tag="b4639" /gene_synonym="ECK4437" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG13239" mobile_element complement(1935680..1936874) /mobile_element_type="insertion sequence:IS5H" gene complement(1935826..1936842) /gene="insH1" /locus_tag="b1994" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(1935826..1936842) /gene="insH1" /locus_tag="b1994" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC75055.1" /db_xref="GI:1788303" /db_xref="ASAP:ABE-0006619" /db_xref="UniProtKB/Swiss-Prot:P0CE53" /db_xref="EcoGene:EG40008" /translation="MFVIWSHGTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" misc_feature 1936875..1948552 /note="cryptic prophage CP4-44" gene complement(1936881..1937413) /gene="yoeG" /locus_tag="b4640" /gene_synonym="ECK4451" /pseudo /db_xref="EcoGene:EG14440" CDS complement(join(1936881..1936979,1936979..1937413)) /gene="yoeG" /locus_tag="b4640" /gene_synonym="ECK4451" /note="pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14440" gene complement(1937782..1937940) /gene="yoeH" /locus_tag="b4641" /gene_synonym="ECK4452" /pseudo /db_xref="EcoGene:EG14441" CDS complement(1937782..1937940) /gene="yoeH" /locus_tag="b4641" /gene_synonym="ECK4452" /note="pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14441" gene join(1938156..1938461,1939798..1939995) /gene="yoeA" /locus_tag="b4582" /gene_synonym="ECK1989" /gene_synonym="JW5326" /gene_synonym="yoeE" /pseudo /db_xref="EcoGene:EG14308" CDS join(1938156..1938461,1939798..1939995) /gene="yoeA" /locus_tag="b4582" /gene_synonym="ECK1989" /gene_synonym="JW5326" /gene_synonym="yoeE" /note="CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006626" /db_xref="ASAP:ABE-0006636" /db_xref="ASAP:ABE-0285114" /db_xref="UniProtKB/Swiss-Prot:P76356" /db_xref="EcoGene:EG14308" mobile_element complement(1938462..1939792) /mobile_element_type="insertion sequence:IS2F" gene complement(1938473..1939378) /gene="insD1" /locus_tag="b1996" /gene_synonym="ECK0358" /db_xref="EcoGene:EG40004" CDS complement(1938473..1939378) /gene="insD1" /locus_tag="b1996" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="AAC75057.1" /db_xref="GI:1788305" /db_xref="ASAP:ABE-0006629" /db_xref="UniProtKB/Swiss-Prot:P0CF55" /db_xref="EcoGene:EG40004" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(1939336..1939701) /gene="insC1" /locus_tag="b1997" /gene_synonym="ECK0357" /db_xref="EcoGene:EG40003" CDS complement(1939336..1939701) /gene="insC1" /locus_tag="b1997" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="AAT48140.2" /db_xref="GI:145693154" /db_xref="ASAP:ABE-0006631" /db_xref="UniProtKB/Swiss-Prot:P0CF42" /db_xref="EcoGene:EG40003" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" gene 1940181..1940732 /gene="yeeP" /locus_tag="b1999" /gene_synonym="ECK1991" /gene_synonym="JW5327" /pseudo /db_xref="EcoGene:EG13384" CDS 1940181..1940732 /gene="yeeP" /locus_tag="b1999" /gene_synonym="ECK1991" /gene_synonym="JW5327" /note="pseudogene, CP4-44 prophage; 50S ribosome-binding GTPase family;Phage or Prophage Related; putative histone" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006639" /db_xref="UniProtKB/Swiss-Prot:P76359" /db_xref="EcoGene:EG13384" gene 1940838..1941032 /gene="isrC" /locus_tag="b4435" /gene_synonym="ECK1992" /gene_synonym="IS102" /gene_synonym="JWR0240" /db_xref="EcoGene:EG31150" ncRNA 1940838..1941032 /ncRNA_class="other" /gene="isrC" /locus_tag="b4435" /gene_synonym="ECK1992" /gene_synonym="IS102" /gene_synonym="JWR0240" /product="novel sRNA, CP4-44; putative prophage remnant" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047255" /db_xref="EcoGene:EG31150" gene 1941060..1944179 /gene="flu" /locus_tag="b2000" /gene_synonym="agn" /gene_synonym="agn43" /gene_synonym="ECK1993" /gene_synonym="JW1982" /gene_synonym="yeeQ" /gene_synonym="yzzX" /db_xref="EcoGene:EG12686" CDS 1941060..1944179 /gene="flu" /locus_tag="b2000" /gene_synonym="agn" /gene_synonym="agn43" /gene_synonym="ECK1993" /gene_synonym="JW1982" /gene_synonym="yeeQ" /gene_synonym="yzzX" /function="membrane; Outer membrane constituents; Phage or Prophage Related" /note="antigen 43, phase-variable bipartite outer membrane fluffing protein" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter" /protein_id="AAT48141.1" /db_xref="GI:48994897" /db_xref="ASAP:ABE-0006642" /db_xref="UniProtKB/Swiss-Prot:P39180" /db_xref="EcoGene:EG12686" /translation="MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGVAVALSLAA VTSLPVLAADIVVHPGETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQ WVQDGGTANKTTVTSGGLQRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHE GAIATGTVINDKGWQVVKPGTVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINK NGRQIVRAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQ IVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVV EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSG AAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAG TTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT QKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP DNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNA DRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFVQGNRLQ AGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRIVAGSRSHQTGVNGE NNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLMRTEVAGMSVTAGVYG AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSD NNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS AQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRTFSSRGD MRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYN GQATLNVTF" gene 1944300..1945832 /gene="yeeR" /locus_tag="b2001" /gene_synonym="ECK1994" /gene_synonym="JW1983" /db_xref="EcoGene:EG13385" CDS 1944300..1945832 /gene="yeeR" /locus_tag="b2001" /gene_synonym="ECK1994" /gene_synonym="JW1983" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; putative membrane protein" /protein_id="AAC75062.2" /db_xref="GI:87082020" /db_xref="ASAP:ABE-0006648" /db_xref="UniProtKB/Swiss-Prot:P76361" /db_xref="EcoGene:EG13385" /translation="MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPA LLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTT ALAGGLLAVPLQIKNIQQNGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYD ISPSLMWWGGLLYWLAALVTLLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQ NDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWYERNMAGFNEQLKEN LSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICA SCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDATANGLILMKL PETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEI QTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKVE ER" gene 1945829..1946275 /gene="yeeS" /locus_tag="b2002" /gene_synonym="ECK1995" /gene_synonym="JW1984" /db_xref="EcoGene:EG13386" CDS 1945829..1946275 /gene="yeeS" /locus_tag="b2002" /gene_synonym="ECK1995" /gene_synonym="JW1984" /function="Phage or Prophage Related" /note="putative DNA repair protein, RADC family" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; putative DNA repair protein" /protein_id="AAC75063.1" /db_xref="GI:1788312" /db_xref="ASAP:ABE-0006650" /db_xref="UniProtKB/Swiss-Prot:P76362" /db_xref="EcoGene:EG13386" /translation="MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGL EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSG EVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL" gene 1946338..1946559 /gene="yeeT" /locus_tag="b2003" /gene_synonym="ECK1996" /gene_synonym="JW1985" /db_xref="EcoGene:EG13387" CDS 1946338..1946559 /gene="yeeT" /locus_tag="b2003" /gene_synonym="ECK1996" /gene_synonym="JW1985" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; uncharacterized protein" /protein_id="AAC75064.1" /db_xref="GI:1788313" /db_xref="ASAP:ABE-0006653" /db_xref="UniProtKB/Swiss-Prot:P64521" /db_xref="EcoGene:EG13387" /translation="MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQ DIPGVLAVFAERRKDSFGPYVRLMSVTLN" gene 1946633..1947001 /gene="cbeA" /locus_tag="b2004" /gene_synonym="ECK1997" /gene_synonym="JW1986" /gene_synonym="yeeU" /db_xref="EcoGene:EG13388" CDS 1946633..1947001 /gene="cbeA" /locus_tag="b2004" /gene_synonym="ECK1997" /gene_synonym="JW1986" /gene_synonym="yeeU" /function="Phage or Prophage Related" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; cytoskeleton bundling-enhancing factor A; CbtA antitoxin" /protein_id="AAC75065.1" /db_xref="GI:1788314" /db_xref="ASAP:ABE-0006656" /db_xref="UniProtKB/Swiss-Prot:P76364" /db_xref="EcoGene:EG13388" /translation="MSDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYL ADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKAD TLSSCDYVYLAVYPTPEMKN" gene 1947090..1947464 /gene="cbtA" /locus_tag="b2005" /gene_synonym="ECK1998" /gene_synonym="JW1987" /gene_synonym="yeeV" /db_xref="EcoGene:EG13389" CDS 1947090..1947464 /gene="cbtA" /locus_tag="b2005" /gene_synonym="ECK1998" /gene_synonym="JW1987" /gene_synonym="yeeV" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system" /protein_id="AAC75066.1" /db_xref="GI:1788315" /db_xref="ASAP:ABE-0006659" /db_xref="UniProtKB/Swiss-Prot:P64524" /db_xref="EcoGene:EG13389" /translation="MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFA DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATG LMTRDNYRTVNNITLGKYPEAK" gene 1947461..1947628 /gene="yeeW" /locus_tag="b2006" /gene_synonym="ECK1999" /gene_synonym="JW1988" /pseudo /db_xref="EcoGene:EG13390" CDS 1947461..1947628 /gene="yeeW" /locus_tag="b2006" /gene_synonym="ECK1999" /gene_synonym="JW1988" /note="CP4-44 prophage; uncharacterized protein;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006661" /db_xref="UniProtKB/Swiss-Prot:P64526" /db_xref="EcoGene:EG13390" gene complement(1948070..1948198) /gene="yoeD" /locus_tag="b4642" /gene_synonym="ECK4443" /pseudo /db_xref="EcoGene:EG14362" CDS complement(1948070..1948198) /gene="yoeD" /locus_tag="b4642" /gene_synonym="ECK4443" /note="pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14362" gene 1948267..1948452 /gene="yoeF" /locus_tag="b4538" /gene_synonym="ECK2000" /gene_synonym="JW5328" /pseudo /db_xref="EcoGene:EG14425" CDS 1948267..1948452 /gene="yoeF" /locus_tag="b4538" /gene_synonym="ECK2000" /gene_synonym="JW5328" /note="pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285059" /db_xref="UniProtKB/Swiss-Prot:Q2EES3" /db_xref="EcoGene:EG14425" gene complement(1948553..1948882) /gene="yeeX" /locus_tag="b2007" /gene_synonym="ECK2001" /gene_synonym="JW1989" /db_xref="EcoGene:EG13391" CDS complement(1948553..1948882) /gene="yeeX" /locus_tag="b2007" /gene_synonym="ECK2001" /gene_synonym="JW1989" /function="phenotype; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /note="putative alpha helix protein" /codon_start=1 /transl_table=11 /product="UPF0265 family protein" /protein_id="AAC75068.2" /db_xref="GI:145693155" /db_xref="ASAP:ABE-0006663" /db_xref="UniProtKB/Swiss-Prot:P0A8M6" /db_xref="EcoGene:EG13391" /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE MKNGEAK" gene complement(1949054..1950112) /gene="yeeA" /locus_tag="b2008" /gene_synonym="ECK2002" /gene_synonym="JW1990" /db_xref="EcoGene:EG11891" CDS complement(1949054..1950112) /gene="yeeA" /locus_tag="b2008" /gene_synonym="ECK2002" /gene_synonym="JW1990" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative transporter, FUSC family inner membrane protein" /protein_id="AAC75069.1" /db_xref="GI:1788318" /db_xref="ASAP:ABE-0006667" /db_xref="UniProtKB/Swiss-Prot:P33011" /db_xref="EcoGene:EG11891" /translation="MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPE STWPLVTMVVIMGPISFWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCA AAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTG IWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIA PASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQ QILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNME TAHQLELLSNLICRALRK" gene complement(1950310..1950783) /gene="sbmC" /locus_tag="b2009" /gene_synonym="dgi" /gene_synonym="ECK2003" /gene_synonym="gyrI" /gene_synonym="JW1991" /gene_synonym="yeeB" /db_xref="EcoGene:EG11892" CDS complement(1950310..1950783) /gene="sbmC" /locus_tag="b2009" /gene_synonym="dgi" /gene_synonym="ECK2003" /gene_synonym="gyrI" /gene_synonym="JW1991" /gene_synonym="yeeB" /experiment="N-terminus verified by Edman degradation: PMID 9442027" /note="SbmC protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA gyrase inhibitor" /protein_id="AAC75070.1" /db_xref="GI:1788319" /db_xref="ASAP:ABE-0006670" /db_xref="UniProtKB/Swiss-Prot:P33012" /db_xref="EcoGene:EG11892" /translation="MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVP KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVV GDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH" gene complement(1950902..1952068) /gene="dacD" /locus_tag="b2010" /gene_synonym="ECK2004" /gene_synonym="JW5329" /gene_synonym="phsE" /gene_synonym="phsF" /gene_synonym="yeeC" /db_xref="EcoGene:EG11893" CDS complement(1950902..1952068) /gene="dacD" /locus_tag="b2010" /gene_synonym="ECK2004" /gene_synonym="JW5329" /gene_synonym="phsE" /gene_synonym="phsF" /gene_synonym="yeeC" /EC_number="3.4.16.4" /function="putative enzyme; Murein sacculus, peptidoglycan" /note="penicillin binding protein 6b; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b" /protein_id="AAC75071.2" /db_xref="GI:87082022" /db_xref="ASAP:ABE-0006680" /db_xref="UniProtKB/Swiss-Prot:P33013" /db_xref="EcoGene:EG11893" /translation="MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDY TTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVF VGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLH LKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRN GLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLR WGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLD GKELTAPISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDYFHHKA" gene 1952277..1953704 /gene="sbcB" /locus_tag="b2011" /gene_synonym="cpeA" /gene_synonym="ECK2005" /gene_synonym="JW1993" /gene_synonym="xonA" /db_xref="EcoGene:EG10926" CDS 1952277..1953704 /gene="sbcB" /locus_tag="b2011" /gene_synonym="cpeA" /gene_synonym="ECK2005" /gene_synonym="JW1993" /gene_synonym="xonA" /EC_number="3.1.11.1" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 3539937" /note="exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease I; exonuclease I" /protein_id="AAC75072.1" /db_xref="GI:1788321" /db_xref="ASAP:ABE-0006686" /db_xref="UniProtKB/Swiss-Prot:P04995" /db_xref="EcoGene:EG10926" /translation="MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG EPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGY NNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDG LPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLM ALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDS DTLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNL KILRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLP ALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQML VQQYADDKEKVALLKALWQYAEEIV" gene complement(1953747..1953974) /gene="yeeD" /locus_tag="b2012" /gene_synonym="ECK2006" /gene_synonym="JW1994" /db_xref="EcoGene:EG11894" CDS complement(1953747..1953974) /gene="yeeD" /locus_tag="b2012" /gene_synonym="ECK2006" /gene_synonym="JW1994" /codon_start=1 /transl_table=11 /product="putative TusA family sulfurtransferase" /protein_id="AAC75073.1" /db_xref="GI:1788322" /db_xref="ASAP:ABE-0006688" /db_xref="UniProtKB/Swiss-Prot:P33014" /db_xref="EcoGene:EG11894" /translation="MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATE AIPQWAAEEGHAITDYQQIGDAAWSITVQKA" gene complement(1953988..1955046) /gene="yeeE" /locus_tag="b2013" /gene_synonym="ECK2007" /gene_synonym="JW1995" /db_xref="EcoGene:EG11895" CDS complement(1953988..1955046) /gene="yeeE" /locus_tag="b2013" /gene_synonym="ECK2007" /gene_synonym="JW1995" /function="putative transport; Not classified" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="UPF0394 family inner membrane protein" /protein_id="AAC75074.1" /db_xref="GI:1788323" /db_xref="ASAP:ABE-0006691" /db_xref="UniProtKB/Swiss-Prot:P33015" /db_xref="EcoGene:EG11895" /translation="MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIVKNNRMFYA LLIAISVQSVGVFALIQAGLLTYEAGAFPWLGTVIGGYIFGLGIVLAGGCATGTWYRA GEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVL LVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLS EATGRMFGLGITSPTANILQFLVAGDMKYINWGVFLVLGIFVGSFIAAKASREFRVRA ADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASW LVYVRPQRKARLATAAAN" gene complement(1955225..1956583) /gene="plaP" /locus_tag="b2014" /gene_synonym="ECK2008" /gene_synonym="JW5330" /gene_synonym="yeeF" /db_xref="EcoGene:EG11896" CDS complement(1955225..1956583) /gene="plaP" /locus_tag="b2014" /gene_synonym="ECK2008" /gene_synonym="JW5330" /gene_synonym="yeeF" /function="transport; Not classified" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putrescine importer, low affinity" /protein_id="AAC75075.2" /db_xref="GI:87082023" /db_xref="ASAP:ABE-0006696" /db_xref="UniProtKB/Swiss-Prot:P0AA47" /db_xref="EcoGene:EG11896" /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED VA" gene complement(1956573..1956635) /gene="yoeI" /locus_tag="b4678" /gene_synonym="ECK4493" /db_xref="EcoGene:EG14483" CDS complement(1956573..1956635) /gene="yoeI" /locus_tag="b4678" /gene_synonym="ECK4493" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO59998.1" /db_xref="GI:226510955" /db_xref="UniProtKB/Swiss-Prot:C1P606" /db_xref="EcoGene:EG14483" /translation="MGQFFAYATVITVKENDHVA" gene complement(1956850..1957779) /gene="yeeY" /locus_tag="b2015" /gene_synonym="ECK2009" /gene_synonym="JW5834" /db_xref="EcoGene:EG13392" CDS complement(1956850..1957779) /gene="yeeY" /locus_tag="b2015" /gene_synonym="ECK2009" /gene_synonym="JW5834" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC75076.2" /db_xref="GI:87082024" /db_xref="ASAP:ABE-0006700" /db_xref="UniProtKB/Swiss-Prot:P76369" /db_xref="EcoGene:EG13392" /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE AITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI" gene complement(1957825..1958649) /gene="yeeZ" /locus_tag="b2016" /gene_synonym="ECK2010" /gene_synonym="JW1998" /db_xref="EcoGene:EG13393" CDS complement(1957825..1958649) /gene="yeeZ" /locus_tag="b2016" /gene_synonym="ECK2010" /gene_synonym="JW1998" /function="putative enzyme; Not classified" /note="putative enzyme of sugar metabolism; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative epimerase" /protein_id="AAC75077.1" /db_xref="GI:1788327" /db_xref="ASAP:ABE-0006702" /db_xref="UniProtKB/Swiss-Prot:P0AD12" /db_xref="EcoGene:EG13393" /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAH RIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE" gene complement(1958732..1958986) /gene="yoeB" /locus_tag="b4539" /gene_synonym="ECK2011" /gene_synonym="JW5331" /db_xref="EcoGene:EG14356" CDS complement(1958732..1958986) /gene="yoeB" /locus_tag="b4539" /gene_synonym="ECK2011" /gene_synonym="JW5331" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="toxin of the YoeB-YefM toxin-antitoxin system" /protein_id="ABD18681.1" /db_xref="GI:87082025" /db_xref="ASAP:ABE-0285060" /db_xref="UniProtKB/Swiss-Prot:P69348" /db_xref="EcoGene:EG14356" /translation="MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGK PEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY" gene complement(1958983..1959234) /gene="yefM" /locus_tag="b2017" /gene_synonym="ECK2012" /gene_synonym="JW5835" /db_xref="EcoGene:EG12844" CDS complement(1958983..1959234) /gene="yefM" /locus_tag="b2017" /gene_synonym="ECK2012" /gene_synonym="JW5835" /codon_start=1 /transl_table=11 /product="antitoxin of the YoeB-YefM toxin-antitoxin system" /protein_id="AAC75078.2" /db_xref="GI:87082026" /db_xref="ASAP:ABE-0006705" /db_xref="UniProtKB/Swiss-Prot:P69346" /db_xref="EcoGene:EG12844" /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE" gene 1959517..1959567 /gene="hisL" /locus_tag="b2018" /gene_synonym="ECK2013" /gene_synonym="JW2000" /db_xref="EcoGene:EG11269" CDS 1959517..1959567 /gene="hisL" /locus_tag="b2018" /gene_synonym="ECK2013" /gene_synonym="JW2000" /function="leader; Amino acid biosynthesis: Histidine" /note="GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="his operon leader peptide" /protein_id="AAC75079.1" /db_xref="GI:1788329" /db_xref="ASAP:ABE-0006710" /db_xref="UniProtKB/Swiss-Prot:P60995" /db_xref="EcoGene:EG11269" /translation="MTRVQFKHHHHHHHPD" gene 1959713..1960612 /gene="hisG" /locus_tag="b2019" /gene_synonym="ECK2014" /gene_synonym="JW2001" /db_xref="EcoGene:EG10449" CDS 1959713..1960612 /gene="hisG" /locus_tag="b2019" /gene_synonym="ECK2014" /gene_synonym="JW2001" /EC_number="2.4.2.17" /function="enzyme; Amino acid biosynthesis: Histidine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="AAC75080.1" /db_xref="GI:1788330" /db_xref="ASAP:ABE-0006713" /db_xref="UniProtKB/Swiss-Prot:P60757" /db_xref="EcoGene:EG10449" /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE TMEKLKALGASSILVLPIEKMME" gene 1960618..1961922 /gene="hisD" /locus_tag="b2020" /gene_synonym="ECK2015" /gene_synonym="JW2002" /db_xref="EcoGene:EG10447" CDS 1960618..1961922 /gene="hisD" /locus_tag="b2020" /gene_synonym="ECK2015" /gene_synonym="JW2002" /EC_number="1.1.1.23" /function="enzyme; Amino acid biosynthesis: Histidine" /note="L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="bifunctional histidinal dehydrogenase/ histidinol dehydrogenase" /protein_id="AAC75081.1" /db_xref="GI:1788331" /db_xref="ASAP:ABE-0006715" /db_xref="UniProtKB/Swiss-Prot:P06988" /db_xref="EcoGene:EG10447" /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLC SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN ARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA" gene 1961919..1962989 /gene="hisC" /locus_tag="b2021" /gene_synonym="ECK2016" /gene_synonym="JW2003" /db_xref="EcoGene:EG10446" CDS 1961919..1962989 /gene="hisC" /locus_tag="b2021" /gene_synonym="ECK2016" /gene_synonym="JW2003" /EC_number="2.6.1.9" /function="enzyme; Amino acid biosynthesis: Histidine" /note="GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="AAC75082.1" /db_xref="GI:1788332" /db_xref="ASAP:ABE-0006717" /db_xref="UniProtKB/Swiss-Prot:P06986" /db_xref="EcoGene:EG10446" /translation="MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA ILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTG QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER EYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL RITVGTREESQRVIDALRAEQV" gene 1962989..1964056 /gene="hisB" /locus_tag="b2022" /gene_synonym="ECK2017" /gene_synonym="JW2004" /db_xref="EcoGene:EG10445" CDS 1962989..1964056 /gene="hisB" /locus_tag="b2022" /gene_synonym="ECK2017" /gene_synonym="JW2004" /EC_number="3.1.3.15" /EC_number="4.2.1.19" /function="enzyme; Amino acid biosynthesis: Histidine" /note="imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase" /protein_id="AAC75083.2" /db_xref="GI:87082027" /db_xref="ASAP:ABE-0006720" /db_xref="UniProtKB/Swiss-Prot:P06987" /db_xref="EcoGene:EG10445" /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE QLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG RTLRQAIRVEGDTLPSSKGVL" gene 1964056..1964646 /gene="hisH" /locus_tag="b2023" /gene_synonym="ECK2018" /gene_synonym="JW2005" /db_xref="EcoGene:EG10450" CDS 1964056..1964646 /gene="hisH" /locus_tag="b2023" /gene_synonym="ECK2018" /gene_synonym="JW2005" /EC_number="2.4.2.-" /function="enzyme; Amino acid biosynthesis: Histidine" /experiment="N-terminus verified by Edman degradation: PMID 17366475" /note="glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" /protein_id="AAC75084.1" /db_xref="GI:1788334" /db_xref="ASAP:ABE-0006722" /db_xref="UniProtKB/Swiss-Prot:P60595" /db_xref="EcoGene:EG10450" /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM" gene 1964646..1965383 /gene="hisA" /locus_tag="b2024" /gene_synonym="ECK2019" /gene_synonym="JW2006" /db_xref="EcoGene:EG10444" CDS 1964646..1965383 /gene="hisA" /locus_tag="b2024" /gene_synonym="ECK2019" /gene_synonym="JW2006" /EC_number="5.3.1.16" /function="enzyme; Amino acid biosynthesis: Histidine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase" /protein_id="AAC75085.2" /db_xref="GI:87082028" /db_xref="ASAP:ABE-0006725" /db_xref="UniProtKB/Swiss-Prot:P10371" /db_xref="EcoGene:EG10444" /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG STAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTG VRGVIVGRALLEGKFTVKEAIACWQNA" gene 1965365..1966141 /gene="hisF" /locus_tag="b2025" /gene_synonym="ECK2020" /gene_synonym="JW2007" /db_xref="EcoGene:EG10448" CDS 1965365..1966141 /gene="hisF" /locus_tag="b2025" /gene_synonym="ECK2020" /gene_synonym="JW2007" /EC_number="2.4.2.-" /function="enzyme; Amino acid biosynthesis: Histidine" /note="imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase, catalytic subunit with HisH" /protein_id="AAC75086.1" /db_xref="GI:1788336" /db_xref="ASAP:ABE-0006727" /db_xref="UniProtKB/Swiss-Prot:P60664" /db_xref="EcoGene:EG10448" /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC" gene 1966135..1966746 /gene="hisI" /locus_tag="b2026" /gene_synonym="ECK2021" /gene_synonym="hisE" /gene_synonym="hisIE" /gene_synonym="JW2008" /db_xref="EcoGene:EG10451" CDS 1966135..1966746 /gene="hisI" /locus_tag="b2026" /gene_synonym="ECK2021" /gene_synonym="hisE" /gene_synonym="hisIE" /gene_synonym="JW2008" /EC_number="3.5.4.19" /EC_number="3.6.1.31" /function="enzyme; Amino acid biosynthesis: Histidine" /note="phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase" /protein_id="AAC75087.1" /db_xref="GI:2367128" /db_xref="ASAP:ABE-0006729" /db_xref="UniProtKB/Swiss-Prot:P06989" /db_xref="EcoGene:EG10451" /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK TLESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTS SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA ATVHDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKRHQ" repeat_region 1966758..1966787 /note="REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(1966842..1967822) /gene="wzzB" /locus_tag="b2027" /gene_synonym="cld" /gene_synonym="ECK2022" /gene_synonym="JW5836" /gene_synonym="rol" /gene_synonym="wzz" /db_xref="EcoGene:EG13406" CDS complement(1966842..1967822) /gene="wzzB" /locus_tag="b2027" /gene_synonym="cld" /gene_synonym="ECK2022" /gene_synonym="JW5836" /gene_synonym="rol" /gene_synonym="wzz" /function="regulator; Outer membrane constituents" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009243 - O antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="regulator of length of O-antigen component of lipopolysaccharide chains" /protein_id="AAC75088.2" /db_xref="GI:87082029" /db_xref="ASAP:ABE-0006731" /db_xref="UniProtKB/Swiss-Prot:P76372" /db_xref="EcoGene:EG13406" /translation="MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIAL AIGYLAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSA FSALAETLDNQEEREKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVN QELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQ QTGEDITQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIESLKVDDLDIH AYRYVMKPMLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK" gene complement(1967968..1969134) /gene="ugd" /locus_tag="b2028" /gene_synonym="ECK2023" /gene_synonym="JW2010" /gene_synonym="pagA" /gene_synonym="pmrE" /gene_synonym="udg" /gene_synonym="yefA" /db_xref="EcoGene:EG13407" CDS complement(1967968..1969134) /gene="ugd" /locus_tag="b2028" /gene_synonym="ECK2023" /gene_synonym="JW2010" /gene_synonym="pagA" /gene_synonym="pmrE" /gene_synonym="udg" /gene_synonym="yefA" /EC_number="1.1.1.22" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="UDP-glucose 6-dehydrogenase" /protein_id="AAC75089.1" /db_xref="GI:1788340" /db_xref="ASAP:ABE-0006734" /db_xref="UniProtKB/Swiss-Prot:P76373" /db_xref="EcoGene:EG13407" /translation="MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISP IVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIATPTDYDPKTNYFNTSSVESVIK DVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI GERSERAERFAALLQEGAIKQNIPMLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI VDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVII YEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD" gene complement(1969383..1970789) /gene="gnd" /locus_tag="b2029" /gene_synonym="ECK2024" /gene_synonym="JW2011" /db_xref="EcoGene:EG10411" CDS complement(1969383..1970789) /gene="gnd" /locus_tag="b2029" /gene_synonym="ECK2024" /gene_synonym="JW2011" /EC_number="1.1.1.44" /function="enzyme; Energy metabolism, carbon: Oxidative branch, pentose pathway" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009051 - pentose-phosphate shunt, oxidative branch; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase, decarboxylating" /protein_id="AAC75090.1" /db_xref="GI:1788341" /db_xref="ASAP:ABE-0006737" /db_xref="UniProtKB/Swiss-Prot:P00350" /db_xref="EcoGene:EG10411" /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQT FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP LSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYA QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY FKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGA HTYKRIDKEGVFHTEWLD" gene complement(join(1970917..1971265,1972465..1972910)) /gene="wbbL" /locus_tag="b4571" /gene_synonym="ECK2025" /gene_synonym="JW2012" /gene_synonym="JW2016" /gene_synonym="yefJ" /pseudo /db_xref="EcoGene:EG11986" CDS complement(join(1970917..1971265,1972465..1972910)) /gene="wbbL" /locus_tag="b4571" /gene_synonym="ECK2025" /gene_synonym="JW2012" /gene_synonym="JW2016" /gene_synonym="yefJ" /note="pseudogene, lipopolysaccharide biosynthesis protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006744" /db_xref="ASAP:ABE-0285061" /db_xref="ASAP:ABE-0285104" /db_xref="UniProtKB/Swiss-Prot:P36667" /db_xref="EcoGene:EG11986" mobile_element complement(1971270..1972464) /mobile_element_type="insertion sequence:IS5I" gene complement(1971416..1972432) /gene="insH1" /locus_tag="b2030" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(1971416..1972432) /gene="insH1" /locus_tag="b2030" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC75091.1" /db_xref="GI:1788342" /db_xref="ASAP:ABE-0006742" /db_xref="UniProtKB/Swiss-Prot:P0CE54" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene complement(1972912..1974030) /gene="wbbK" /locus_tag="b2032" /gene_synonym="ECK2026" /gene_synonym="JW2017" /gene_synonym="yefI" /db_xref="EcoGene:EG11985" CDS complement(1972912..1974030) /gene="wbbK" /locus_tag="b2032" /gene_synonym="ECK2026" /gene_synonym="JW2017" /gene_synonym="yefI" /function="putative enzyme; Not classified" /note="putative glucose transferase" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthesis protein" /protein_id="AAC75093.1" /db_xref="GI:1788344" /db_xref="ASAP:ABE-0006747" /db_xref="UniProtKB/Swiss-Prot:P37751" /db_xref="EcoGene:EG11985" /translation="MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSA KELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTK KRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEK FIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIIS AARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDI VCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLII DFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH" gene complement(1974015..1974605) /gene="wbbJ" /locus_tag="b2033" /gene_synonym="ECK2027" /gene_synonym="JW2018" /gene_synonym="yefH" /db_xref="EcoGene:EG11984" CDS complement(1974015..1974605) /gene="wbbJ" /locus_tag="b2033" /gene_synonym="ECK2027" /gene_synonym="JW2018" /gene_synonym="yefH" /function="putative enzyme; Not classified" /note="putative O-acetyl transferase; GO_process: GO:0009103 - lipopolysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="putative lipopolysaccharide biosynthesis O-acetyl transferase" /protein_id="AAC75094.1" /db_xref="GI:1788345" /db_xref="ASAP:ABE-0006749" /db_xref="UniProtKB/Swiss-Prot:P37750" /db_xref="EcoGene:EG11984" /translation="MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDG SINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFI TDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVG ANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA" gene complement(1974586..1975578) /gene="wbbI" /locus_tag="b2034" /gene_synonym="ECK2028" /gene_synonym="JW2019" /gene_synonym="yefG" /db_xref="EcoGene:EG11983" CDS complement(1974586..1975578) /gene="wbbI" /locus_tag="b2034" /gene_synonym="ECK2028" /gene_synonym="JW2019" /gene_synonym="yefG" /function="enzyme; Lipopolysaccharide biosynthesis" /note="putative Galf transferase" /codon_start=1 /transl_table=11 /product="d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase" /protein_id="AAC75095.1" /db_xref="GI:1788346" /db_xref="ASAP:ABE-0006751" /db_xref="UniProtKB/Swiss-Prot:P37749" /db_xref="EcoGene:EG11983" /translation="MYFLNDLNFSRRDAGFKARKDALDIASDYENISVVNIPLWGGVV QRIISSVKLSTFLCGLENKDVLIFNFPMAKPFWHILSFFHRLLKFRIVPLIHDIDELR GGGGSDSVRLATCDMVISHNPQMTKYLSKYMSQDKIKDIKIFDYLVSSDVEHRDVTDK QRGVIYAGNLSRHKCSFIYTEGCDFTLFGVNYENKDNPKYLGSFDAQSPEKINLPGMQ FGLIWDGDSVETCSGAFGDYLKFNNPHKTSLYLSMELPVFIWDKAALADFIVDNRIGY AVGSIKEMQEIVDSMTIETYKQISENTKIISQKIRTGSYFRDVLEEVIDDLKTR" gene complement(1975581..1976747) /gene="wbbH" /locus_tag="b2035" /gene_synonym="ECK2029" /gene_synonym="JW2020" /gene_synonym="rfc" /gene_synonym="yefF" /db_xref="EcoGene:EG11982" CDS complement(1975581..1976747) /gene="wbbH" /locus_tag="b2035" /gene_synonym="ECK2029" /gene_synonym="JW2020" /gene_synonym="rfc" /gene_synonym="yefF" /function="enzyme; Macromolecule metabolism: Lipopolysaccharide" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_function: GO:0008755 - O antigen polymerase activity; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0009103 - lipopolysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="O-antigen polymerase" /protein_id="AAC75096.1" /db_xref="GI:1788347" /db_xref="ASAP:ABE-0006753" /db_xref="UniProtKB/Swiss-Prot:P37748" /db_xref="EcoGene:EG11982" /translation="MIYLVISVFLITAFICLYLKKDIFYPAVCVNIIFALVLLGYEIT SDIYAFQLNDATLIFLLCNVLTFTLSCLLTESVLDLNIRKVNNAIYSIPSKKVHNVGL LVISFSMIYICMRLSNYQFGTSLLSYMNLIRDADVEDTSRNFSAYMQPIILTTFALFI WSKKFTNTKVSKTFTLLVFIVFIFAIILNTGKQIVFMVIISYAFIVGVNRVKHYVYLI TAVGVLFSLYMLFLRGLPGGMAYYLSMYLVSPIIAFQEFYFQQVSNSASSHVFWFFER LMGLLTGGVSMSLHKEFVWVGLPTNVYTAFSDYVYISAELSYLMMVIHGCISGVLWRL SRNYISVKIFYSYFIYTFSFIFYHESFMTNISSWIQITLCIIVFSQFLKAQKIK" gene complement(1976747..1977850) /gene="glf" /locus_tag="b2036" /gene_synonym="ECK2030" /gene_synonym="JW2021" /gene_synonym="yefE" /db_xref="EcoGene:EG11981" CDS complement(1976747..1977850) /gene="glf" /locus_tag="b2036" /gene_synonym="ECK2030" /gene_synonym="JW2021" /gene_synonym="yefE" /EC_number="5.4.99.9" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8576037" /note="UDP-galactopyranose mutase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009243 - O antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-galactopyranose mutase, FAD/NAD(P)-binding" /protein_id="AAC75097.1" /db_xref="GI:1788348" /db_xref="ASAP:ABE-0006755" /db_xref="UniProtKB/Swiss-Prot:P37747" /db_xref="EcoGene:EG11981" /translation="MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQ MWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSA KELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKD SLASKAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEFPNFQGNAVINFTDANVPY TRIIEHKHFDYVETKHTVVTKEYPLEWKVGDEPYYPVNDNKNMELFKKYRELASREDK VIFGGRLAEYKYYDMHQVISAALYQVKNIMSTD" gene complement(1977858..1979105) /gene="wzxB" /locus_tag="b2037" /gene_synonym="ECK2031" /gene_synonym="JW2022" /gene_synonym="rfbX" /gene_synonym="wzx" /db_xref="EcoGene:EG11980" CDS complement(1977858..1979105) /gene="wzxB" /locus_tag="b2037" /gene_synonym="ECK2031" /gene_synonym="JW2022" /gene_synonym="rfbX" /gene_synonym="wzx" /function="putative transport; Surface polysaccharides & antigens" /note="putative O-antigen transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009243 - O antigen biosynthetic process" /codon_start=1 /transl_table=11 /product="putative polisoprenol-linked O-antigen transporter" /protein_id="AAC75098.1" /db_xref="GI:1788349" /db_xref="ASAP:ABE-0006757" /db_xref="UniProtKB/Swiss-Prot:P37746" /db_xref="EcoGene:EG11980" /translation="MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGI FGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIF LTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIP LTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGF HVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRIS STLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMII SPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITL LATECLVTSLMLMFVRNNKLLVC" gene complement(1979102..1979659) /gene="rfbC" /locus_tag="b2038" /gene_synonym="ECK2032" /gene_synonym="JW2023" /gene_synonym="rfbD" /gene_synonym="rmlC" /db_xref="EcoGene:EG11979" CDS complement(1979102..1979659) /gene="rfbC" /locus_tag="b2038" /gene_synonym="ECK2032" /gene_synonym="JW2023" /gene_synonym="rfbD" /gene_synonym="rmlC" /EC_number="5.1.3.13" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="dTDP-6-deoxy-D-glucose-3,5 epimerase; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042803 - protein homodimerization activity; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0009103 - lipopolysaccharide biosynthetic process; GO_process: GO:0019305 - dTDP-rhamnose biosynthetic process" /codon_start=1 /transl_table=11 /product="dTDP-4-deoxyrhamnose-3,5-epimerase" /protein_id="AAC75099.1" /db_xref="GI:1788350" /db_xref="ASAP:ABE-0006759" /db_xref="UniProtKB/Swiss-Prot:P37745" /db_xref="EcoGene:EG11979" /translation="MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVS FVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVL LSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQT SGLILSPKDERLFTLDELIRLKLIA" gene complement(1979659..1980540) /gene="rfbA" /locus_tag="b2039" /gene_synonym="ECK2033" /gene_synonym="JW2024" /gene_synonym="rmlA" /gene_synonym="som" /db_xref="EcoGene:EG11978" CDS complement(1979659..1980540) /gene="rfbA" /locus_tag="b2039" /gene_synonym="ECK2033" /gene_synonym="JW2024" /gene_synonym="rmlA" /gene_synonym="som" /EC_number="2.7.7.24" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="dTDP-glucose pyrophosphorylase; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_function: GO:0000287 - magnesium ion binding; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0019305 - dTDP-rhamnose biosynthetic process; GO_process: GO:0009103 - lipopolysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /protein_id="AAC75100.1" /db_xref="GI:1788351" /db_xref="ASAP:ABE-0006762" /db_xref="UniProtKB/Swiss-Prot:P37744" /db_xref="EcoGene:EG11978" /translation="MKMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGG DDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISL EEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMM GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKGFIDVEQVRKLAVPL IKNNYGQYLYKMTKDSN" gene complement(1980598..1981496) /gene="rfbD" /locus_tag="b2040" /gene_synonym="ECK2034" /gene_synonym="JW2025" /gene_synonym="rmlD" /db_xref="EcoGene:EG12411" CDS complement(1980598..1981496) /gene="rfbD" /locus_tag="b2040" /gene_synonym="ECK2034" /gene_synonym="JW2025" /gene_synonym="rmlD" /EC_number="1.1.1.133" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="dTDP-6-deoxy-L-mannose-dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit" /protein_id="AAC75101.1" /db_xref="GI:1788352" /db_xref="ASAP:ABE-0006764" /db_xref="UniProtKB/Swiss-Prot:P37760" /db_xref="EcoGene:EG12411" /translation="MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPE GVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHY STDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGN NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVAS GTTTWYDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFA LVLPDWQVGVKRMLNELFTTTAI" gene complement(1981496..1982581) /gene="rfbB" /locus_tag="b2041" /gene_synonym="ECK2035" /gene_synonym="JW2026" /gene_synonym="rmlB" /gene_synonym="som" /db_xref="EcoGene:EG12412" CDS complement(1981496..1982581) /gene="rfbB" /locus_tag="b2041" /gene_synonym="ECK2035" /gene_synonym="JW2026" /gene_synonym="rmlB" /gene_synonym="som" /EC_number="4.2.1.46" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="dTDP-glucose 4,6 dehydratase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6 dehydratase, NAD(P)-binding" /protein_id="AAC75102.1" /db_xref="GI:1788353" /db_xref="ASAP:ABE-0006766" /db_xref="UniProtKB/Swiss-Prot:P37759" /db_xref="EcoGene:EG12412" /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLA DVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV GTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTA YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG KALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDL LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWY LSNTKWVDNVKSGAYQSWIEQNYEGRQ" gene complement(1982954..1983847) /gene="wcaN" /locus_tag="b2042" /gene_synonym="ECK2036" /gene_synonym="galF" /gene_synonym="JW2027" /db_xref="EcoGene:EG13578" CDS complement(1982954..1983847) /gene="wcaN" /locus_tag="b2042" /gene_synonym="ECK2036" /gene_synonym="galF" /gene_synonym="JW2027" /function="putative enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="putative regulatory subunit for GalU" /protein_id="AAC75103.1" /db_xref="GI:1788355" /db_xref="ASAP:ABE-0006771" /db_xref="UniProtKB/Swiss-Prot:P0AAB6" /db_xref="EcoGene:EG13578" /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY GLRNLKEGAKFRKGIEKLLSE" gene complement(1984022..1985416) /gene="wcaM" /locus_tag="b2043" /gene_synonym="ECK2037" /gene_synonym="JW2028" /gene_synonym="yefK" /db_xref="EcoGene:EG12651" CDS complement(1984022..1985416) /gene="wcaM" /locus_tag="b2043" /gene_synonym="ECK2037" /gene_synonym="JW2028" /gene_synonym="yefK" /note="putative colanic acid biosynthesis protein; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="colanic acid biosynthesis protein" /protein_id="AAC75104.1" /db_xref="GI:1788356" /db_xref="ASAP:ABE-0006774" /db_xref="UniProtKB/Swiss-Prot:P71244" /db_xref="EcoGene:EG12651" /translation="MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD WIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS QVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTV SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCT NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF RVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINV MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIV NVEKINFRLPELRE" gene complement(1985427..1986647) /gene="wcaL" /locus_tag="b2044" /gene_synonym="ECK2038" /gene_synonym="JW2029" /gene_synonym="yefL" /db_xref="EcoGene:EG12652" CDS complement(1985427..1986647) /gene="wcaL" /locus_tag="b2044" /gene_synonym="ECK2038" /gene_synonym="JW2029" /gene_synonym="yefL" /function="putative enzyme; Not classified" /note="putative colanic acid biosynthesis glycosyl transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="AAC75105.1" /db_xref="GI:1788357" /db_xref="ASAP:ABE-0006777" /db_xref="UniProtKB/Swiss-Prot:P71243" /db_xref="EcoGene:EG12652" /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEILALQKGDTQN THAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESR NLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST LHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQ QVINRELASLLQAL" gene complement(1986644..1987924) /gene="wcaK" /locus_tag="b2045" /gene_synonym="ECK2039" /gene_synonym="JW2030" /db_xref="EcoGene:EG13577" CDS complement(1986644..1987924) /gene="wcaK" /locus_tag="b2045" /gene_synonym="ECK2039" /gene_synonym="JW2030" /function="putative enzyme; Not classified" /note="putative galactokinase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="colanic acid biosynthesis protein" /protein_id="AAC75106.1" /db_xref="GI:1788358" /db_xref="ASAP:ABE-0006780" /db_xref="UniProtKB/Swiss-Prot:P71242" /db_xref="EcoGene:EG13577" /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPV SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDF TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT RLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ LPALNARLSEAVSRERQTGMQMVQSVLERIGEVK" repeat_region 1987986..1988171 /note="REP144 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(1988200..1989678) /gene="wzxC" /locus_tag="b2046" /gene_synonym="ECK2040" /gene_synonym="JW2031" /gene_synonym="wzx" /db_xref="EcoGene:EG13576" CDS complement(1988200..1989678) /gene="wzxC" /locus_tag="b2046" /gene_synonym="ECK2040" /gene_synonym="JW2031" /gene_synonym="wzx" /function="putative transport; Protein, peptide secretion" /note="probable export protein" /codon_start=1 /transl_table=11 /product="putative colanic acid exporter" /protein_id="AAC75107.1" /db_xref="GI:1788359" /db_xref="ASAP:ABE-0006783" /db_xref="UniProtKB/Swiss-Prot:P77377" /db_xref="EcoGene:EG13576" /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLI GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTCTV VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVG LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA VQIATGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG" gene complement(1989680..1991074) /gene="wcaJ" /locus_tag="b2047" /gene_synonym="ECK2041" /gene_synonym="JW2032" /db_xref="EcoGene:EG13575" CDS complement(1989680..1991074) /gene="wcaJ" /locus_tag="b2047" /gene_synonym="ECK2041" /gene_synonym="JW2032" /function="putative enzyme; Not classified" /note="putative UDP-glucose lipid carrier transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="colanic biosynthesis UDP-glucose lipid carrier transferase" /protein_id="AAC75108.1" /db_xref="GI:1788360" /db_xref="ASAP:ABE-0006785" /db_xref="UniProtKB/Swiss-Prot:P71241" /db_xref="EcoGene:EG13575" /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF LYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFN NDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM ESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRA EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR QLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV FLTVFKGFVNKAAY" gene complement(1991129..1992499) /gene="cpsG" /locus_tag="b2048" /gene_synonym="ECK2042" /gene_synonym="JW2033" /gene_synonym="manB" /gene_synonym="rfbK" /db_xref="EcoGene:EG10162" CDS complement(1991129..1992499) /gene="cpsG" /locus_tag="b2048" /gene_synonym="ECK2042" /gene_synonym="JW2033" /gene_synonym="manB" /gene_synonym="rfbK" /EC_number="5.4.2.8" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="phosphomannomutase" /protein_id="AAC75109.1" /db_xref="GI:1788361" /db_xref="ASAP:ABE-0006788" /db_xref="UniProtKB/Swiss-Prot:P24175" /db_xref="EcoGene:EG10162" /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE KNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY FRDFAYCDSGMIPWLLVAELVCLKDKTLGELVRDRMAAFPASGEINSKLAQPVEAINR VEQHFSREALAVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTL LTLLNE" gene complement(1992604..1994040) /gene="cpsB" /locus_tag="b2049" /gene_synonym="ECK2043" /gene_synonym="JW2034" /gene_synonym="manC" /gene_synonym="mni" /gene_synonym="rfbM" /db_xref="EcoGene:EG10161" CDS complement(1992604..1994040) /gene="cpsB" /locus_tag="b2049" /gene_synonym="ECK2043" /gene_synonym="JW2034" /gene_synonym="manC" /gene_synonym="mni" /gene_synonym="rfbM" /EC_number="2.7.7.22" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="mannose-1-phosphate guanyltransferase" /protein_id="AAC75110.1" /db_xref="GI:1788362" /db_xref="ASAP:ABE-0006791" /db_xref="UniProtKB/Swiss-Prot:P24174" /db_xref="EcoGene:EG10161" /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY IRRGEVSAGEQDMVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK KYRPDILDACEKAMSAVDPDLNFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI PLDLIEVRSGSYLEEDDVVRFADRYGRV" gene complement(1994043..1995266) /gene="wcaI" /locus_tag="b2050" /gene_synonym="ECK2044" /gene_synonym="JW2035" /gene_synonym="yefD" /db_xref="EcoGene:EG11790" CDS complement(1994043..1995266) /gene="wcaI" /locus_tag="b2050" /gene_synonym="ECK2044" /gene_synonym="JW2035" /gene_synonym="yefD" /function="putative enzyme; Not classified" /note="putative colanic biosynthesis glycosyl transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="AAC75111.1" /db_xref="GI:1788363" /db_xref="ASAP:ABE-0006794" /db_xref="UniProtKB/Swiss-Prot:P32057" /db_xref="EcoGene:EG11790" /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR RWKPDRIIGVVPTLFCAPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADV DALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN AVITAEAYTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL DKENVLRQFINDIRG" gene complement(1995263..1995742) /gene="wcaH" /locus_tag="b2051" /gene_synonym="ECK2045" /gene_synonym="gmm" /gene_synonym="JW5335" /gene_synonym="nudD" /gene_synonym="yefC" /db_xref="EcoGene:EG11789" CDS complement(1995263..1995742) /gene="wcaH" /locus_tag="b2051" /gene_synonym="ECK2045" /gene_synonym="gmm" /gene_synonym="JW5335" /gene_synonym="nudD" /gene_synonym="yefC" /EC_number="1.1.1.271" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="GO_process: GO:0009226 - nucleotide-sugar biosynthetic process; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="GDP-mannose mannosyl hydrolase" /protein_id="AAC75112.2" /db_xref="GI:87082031" /db_xref="ASAP:ABE-0006796" /db_xref="UniProtKB/Swiss-Prot:P32056" /db_xref="EcoGene:EG11789" /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGY WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY VVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL" gene complement(1995745..1996710) /gene="wcaG" /locus_tag="b2052" /gene_synonym="ECK2046" /gene_synonym="fcl" /gene_synonym="JW2037" /gene_synonym="yefB" /db_xref="EcoGene:EG11788" CDS complement(1995745..1996710) /gene="wcaG" /locus_tag="b2052" /gene_synonym="ECK2046" /gene_synonym="fcl" /gene_synonym="JW2037" /gene_synonym="yefB" /EC_number="1.1.1.271" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase" /protein_id="AAC75113.1" /db_xref="GI:1788365" /db_xref="ASAP:ABE-0006801" /db_xref="UniProtKB/Swiss-Prot:P32055" /db_xref="EcoGene:EG11788" /translation="MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDS RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG" gene complement(1996713..1997834) /gene="gmd" /locus_tag="b2053" /gene_synonym="ECK2047" /gene_synonym="JW2038" /gene_synonym="yefA" /gene_synonym="yefN" /db_xref="EcoGene:EG11787" CDS complement(1996713..1997834) /gene="gmd" /locus_tag="b2053" /gene_synonym="ECK2047" /gene_synonym="JW2038" /gene_synonym="yefA" /gene_synonym="yefN" /EC_number="4.2.1.47" /function="enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0009435 - NAD biosynthetic process; GO_process: GO:0009269 - response to desiccation" /codon_start=1 /transl_table=11 /product="GDP-D-mannose dehydratase, NAD(P)-binding" /protein_id="AAC75114.1" /db_xref="GI:1788366" /db_xref="ASAP:ABE-0006803" /db_xref="UniProtKB/Swiss-Prot:P0AC88" /db_xref="EcoGene:EG11787" /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES" gene complement(1997860..1998408) /gene="wcaF" /locus_tag="b2054" /gene_synonym="ECK2048" /gene_synonym="JW2039" /db_xref="EcoGene:EG13574" CDS complement(1997860..1998408) /gene="wcaF" /locus_tag="b2054" /gene_synonym="ECK2048" /gene_synonym="JW2039" /function="putative enzyme; Not classified" /note="putative transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative acyl transferase" /protein_id="AAC75115.1" /db_xref="GI:1788367" /db_xref="ASAP:ABE-0006805" /db_xref="UniProtKB/Swiss-Prot:P0ACD2" /db_xref="EcoGene:EG13574" /translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKS LPANVVCRGNPAVVIRERVETE" gene complement(1998424..1999170) /gene="wcaE" /locus_tag="b2055" /gene_synonym="ECK2049" /gene_synonym="JW2040" /db_xref="EcoGene:EG13573" CDS complement(1998424..1999170) /gene="wcaE" /locus_tag="b2055" /gene_synonym="ECK2049" /gene_synonym="JW2040" /function="putative enzyme; Not classified" /note="putative colanic acid biosynthesis glycosyl transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="AAC75116.1" /db_xref="GI:1788368" /db_xref="ASAP:ABE-0006807" /db_xref="UniProtKB/Swiss-Prot:P71239" /db_xref="EcoGene:EG13573" /translation="MLLSIITVAFRNLEGIVKTHASLAHLAQVEDISFEWIVVDGGSN DGTREYLENLNGIFNLRFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQNAANF VRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKW RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQ ILHVPGFWAELSWHLRQRTTSKTKALYNKV" gene complement(1999181..2000398) /gene="wcaD" /locus_tag="b2056" /gene_synonym="ECK2050" /gene_synonym="JW2041" /db_xref="EcoGene:EG13572" CDS complement(1999181..2000398) /gene="wcaD" /locus_tag="b2056" /gene_synonym="ECK2050" /gene_synonym="JW2041" /function="putative enzyme; Phage-related functions and prophages" /codon_start=1 /transl_table=11 /product="putative colanic acid polymerase" /protein_id="AAC75117.1" /db_xref="GI:1788369" /db_xref="ASAP:ABE-0006809" /db_xref="UniProtKB/Swiss-Prot:P71238" /db_xref="EcoGene:EG13572" /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR FKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVL NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGV MTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS SSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY FSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV CPFILRKALNITR" gene complement(2000373..2001590) /gene="wcaC" /locus_tag="b2057" /gene_synonym="ECK2051" /gene_synonym="JW2042" /db_xref="EcoGene:EG13571" CDS complement(2000373..2001590) /gene="wcaC" /locus_tag="b2057" /gene_synonym="ECK2051" /gene_synonym="JW2042" /function="putative enzyme; Not classified" /note="GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="AAC75118.1" /db_xref="GI:1788370" /db_xref="ASAP:ABE-0006811" /db_xref="UniProtKB/Swiss-Prot:P71237" /db_xref="EcoGene:EG13571" /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHV LHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI ATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQ QMLEEYVNFYQNL" gene complement(2001587..2002075) /gene="wcaB" /locus_tag="b2058" /gene_synonym="ECK2052" /gene_synonym="JW2043" /db_xref="EcoGene:EG13570" CDS complement(2001587..2002075) /gene="wcaB" /locus_tag="b2058" /gene_synonym="ECK2052" /gene_synonym="JW2043" /function="putative enzyme; Not classified" /note="putative transferase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative acyl transferase" /protein_id="AAC75119.1" /db_xref="GI:1788371" /db_xref="ASAP:ABE-0006813" /db_xref="UniProtKB/Swiss-Prot:P0ACC9" /db_xref="EcoGene:EG13570" /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG ADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV IK" gene complement(2002078..2002917) /gene="wcaA" /locus_tag="b2059" /gene_synonym="ECK2053" /gene_synonym="JW2044" /db_xref="EcoGene:EG13569" CDS complement(2002078..2002917) /gene="wcaA" /locus_tag="b2059" /gene_synonym="ECK2053" /gene_synonym="JW2044" /function="putative regulator; Not classified" /note="putative regulator; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase" /protein_id="AAC75120.1" /db_xref="GI:1788372" /db_xref="ASAP:ABE-0006816" /db_xref="UniProtKB/Swiss-Prot:P77414" /db_xref="EcoGene:EG13569" /translation="MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNR LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI RGR" repeat_region 2002952..2002985 /note="REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2003010..2005172) /gene="wzc" /locus_tag="b2060" /gene_synonym="ECK2054" /gene_synonym="JW2045" /db_xref="EcoGene:EG13568" CDS complement(2003010..2005172) /gene="wzc" /locus_tag="b2060" /gene_synonym="ECK2054" /gene_synonym="JW2045" /EC_number="2.7.10.2" /function="enzyme; Not classified" /note="GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase" /protein_id="AAC75121.2" /db_xref="GI:87082032" /db_xref="ASAP:ABE-0006819" /db_xref="UniProtKB/Swiss-Prot:P76387" /db_xref="EcoGene:EG13568" /translation="MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITTVFALC AVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGK TVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDNK NYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHASPGSEFTVTKYSTLGMINQLQNSL TVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQL PEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLY TKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNK EQELKITEASTVGDVRIVDPAITQPGVLKPKKGLIILGAIILGLMLSIVGVLLRSLFN RGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIE AIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR KGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSER FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSR FEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK" gene complement(2005175..2005618) /gene="wzb" /locus_tag="b2061" /gene_synonym="ECK2055" /gene_synonym="JW2046" /db_xref="EcoGene:EG13567" CDS complement(2005175..2005618) /gene="wzb" /locus_tag="b2061" /gene_synonym="ECK2055" /gene_synonym="JW2046" /EC_number="3.1.3.48" /function="enzyme; Not classified" /note="low molecular weight protein-tyrosine-phosphatase; GO_process: GO:0009242 - colanic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase" /protein_id="AAC75122.1" /db_xref="GI:1788375" /db_xref="ASAP:ABE-0006822" /db_xref="UniProtKB/Swiss-Prot:P0AAB2" /db_xref="EcoGene:EG13567" /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM LFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV" gene complement(2005624..2006763) /gene="wza" /locus_tag="b2062" /gene_synonym="ECK2056" /gene_synonym="JW2047" /db_xref="EcoGene:EG13566" CDS complement(2005624..2006763) /gene="wza" /locus_tag="b2062" /gene_synonym="ECK2056" /gene_synonym="JW2047" /function="transport; Not classified" /note="putative polysaccharide export protein" /codon_start=1 /transl_table=11 /product="colanic acid export protein; outer membrane auxillary lipoprotein" /protein_id="AAC75123.1" /db_xref="GI:1788376" /db_xref="ASAP:ABE-0006825" /db_xref="UniProtKB/Swiss-Prot:P0A930" /db_xref="EcoGene:EG13566" /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ VDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN GREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW" gene 2007422..2009005 /gene="yegH" /locus_tag="b2063" /gene_synonym="ECK2057" /gene_synonym="JW5336" /db_xref="EcoGene:EG14051" CDS 2007422..2009005 /gene="yegH" /locus_tag="b2063" /gene_synonym="ECK2057" /gene_synonym="JW5336" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC75124.2" /db_xref="GI:87082033" /db_xref="ASAP:ABE-0006830" /db_xref="UniProtKB/Swiss-Prot:P76389" /db_xref="EcoGene:EG14051" /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHT RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR VQKVQIIPLRKDGEMEYEV" repeat_region 2009222..2009258 /note="REP146 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2009279..2011132) /gene="asmA" /locus_tag="b2064" /gene_synonym="ECK2058" /gene_synonym="JW2049" /gene_synonym="yegA" /db_xref="EcoGene:EG11361" CDS complement(2009279..2011132) /gene="asmA" /locus_tag="b2064" /gene_synonym="ECK2058" /gene_synonym="JW2049" /gene_synonym="yegA" /function="phenotype; Outer membrane constituents" /note="suppressor of ompF assembly mutants; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009103 - lipopolysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein" /protein_id="AAC75125.1" /db_xref="GI:1788378" /db_xref="ASAP:ABE-0006833" /db_xref="UniProtKB/Swiss-Prot:P28249" /db_xref="EcoGene:EG11361" /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSG YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK QVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA AIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT LNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM" gene complement(2011154..2011735) /gene="dcd" /locus_tag="b2065" /gene_synonym="dus" /gene_synonym="ECK2059" /gene_synonym="JW2050" /gene_synonym="paxA" /db_xref="EcoGene:EG11418" CDS complement(2011154..2011735) /gene="dcd" /locus_tag="b2065" /gene_synonym="dus" /gene_synonym="ECK2059" /gene_synonym="JW2050" /gene_synonym="paxA" /EC_number="3.5.4.13" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /experiment="N-terminus verified by Edman degradation: PMID 1324907" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="deoxycytidine triphosphate deaminase; dCTP deaminase" /protein_id="AAC75126.1" /db_xref="GI:1788379" /db_xref="ASAP:ABE-0006835" /db_xref="UniProtKB/Swiss-Prot:P28248" /db_xref="EcoGene:EG11418" /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF EPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD" gene complement(2011827..2012468) /gene="udk" /locus_tag="b2066" /gene_synonym="ECK2060" /gene_synonym="JW2051" /db_xref="EcoGene:EG11701" CDS complement(2011827..2012468) /gene="udk" /locus_tag="b2066" /gene_synonym="ECK2060" /gene_synonym="JW2051" /EC_number="2.7.1.48" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="uridine/cytidine kinase" /protein_id="AAC75127.2" /db_xref="GI:87082034" /db_xref="ASAP:ABE-0006840" /db_xref="UniProtKB/Swiss-Prot:P0A8F4" /db_xref="EcoGene:EG11701" /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI PEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTR MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE" gene 2012786..2016103 /gene="yegE" /locus_tag="b2067" /gene_synonym="ECK2061" /gene_synonym="JW2052" /db_xref="EcoGene:EG12396" CDS 2012786..2016103 /gene="yegE" /locus_tag="b2067" /gene_synonym="ECK2061" /gene_synonym="JW2052" /function="putative regulator; Not classified" /note="putative sensor-type protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="putative diguanylate cyclase" /protein_id="AAC75128.1" /db_xref="GI:1788381" /db_xref="ASAP:ABE-0006845" /db_xref="UniProtKB/Swiss-Prot:P38097" /db_xref="EcoGene:EG12396" /translation="MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLA PLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAV VGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWV LSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTF IIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLI LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA SHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL RELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFS DPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPL PPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA DAQPLDLLVNSSYFAIN" repeat_region 2016120..2016203 /note="REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2016212..2017060) /gene="alkA" /locus_tag="b2068" /gene_synonym="aidA" /gene_synonym="ECK2062" /gene_synonym="JW2053" /db_xref="EcoGene:EG11222" CDS complement(2016212..2017060) /gene="alkA" /locus_tag="b2068" /gene_synonym="aidA" /gene_synonym="ECK2062" /gene_synonym="JW2053" /EC_number="3.2.2.21" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 6094528" /note="3-methyl-adenine DNA glycosylase II, inducible; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="3-methyl-adenine DNA glycosylase II" /protein_id="AAC75129.1" /db_xref="GI:1788383" /db_xref="ASAP:ABE-0006848" /db_xref="UniProtKB/Swiss-Prot:P04395" /db_xref="EcoGene:EG11222" /translation="MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEY RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAAR PGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQR LAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRW TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG WQPDEA" gene 2017194..2018546 /gene="yegD" /locus_tag="b2069" /gene_synonym="ECK2063" /gene_synonym="JW2054" /db_xref="EcoGene:EG12200" CDS 2017194..2018546 /gene="yegD" /locus_tag="b2069" /gene_synonym="ECK2063" /gene_synonym="JW2054" /function="putative regulator; Not classified" /note="putative heat shock protein; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="Hsp70 chaperone family protein" /protein_id="AAC75130.2" /db_xref="GI:87082035" /db_xref="ASAP:ABE-0006856" /db_xref="UniProtKB/Swiss-Prot:P36928" /db_xref="EcoGene:EG12200" /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF QGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS YRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLA LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR " gene complement(2018559..2020505) /gene="yegI" /locus_tag="b2070" /gene_synonym="ECK2064" /gene_synonym="JW2055" /db_xref="EcoGene:EG14052" CDS complement(2018559..2020505) /gene="yegI" /locus_tag="b2070" /gene_synonym="ECK2064" /gene_synonym="JW2055" /function="putative enzyme; Not classified" /note="putative chaperonin" /codon_start=1 /transl_table=11 /product="protein kinase-related putative non-specific DNA-binding protein" /protein_id="AAC75131.1" /db_xref="GI:1788385" /db_xref="ASAP:ABE-0006858" /db_xref="UniProtKB/Swiss-Prot:P76393" /db_xref="EcoGene:EG14052" /translation="MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYH TPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMI YSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLI DSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFG GRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMF QQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGV IYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRRE YIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFN RAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQ KQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVID WKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPART MPLMEPLRQAAEKLAQAQADLSRC" gene 2020705..2021166 /gene="yegJ" /locus_tag="b2071" /gene_synonym="ECK2065" /gene_synonym="JW2056" /db_xref="EcoGene:EG14053" CDS 2020705..2021166 /gene="yegJ" /locus_tag="b2071" /gene_synonym="ECK2065" /gene_synonym="JW2056" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75132.1" /db_xref="GI:1788386" /db_xref="ASAP:ABE-0006863" /db_xref="UniProtKB/Swiss-Prot:P76394" /db_xref="EcoGene:EG14053" /translation="MKKILLMLSLLFFTTAGFSEVSDTLVTGGYDKQAMSDAIKHARK ETDKFIEVMNKKDADTFAVKAPITDHGRTEHFWLTDVTYSNGMFIGVISNDPGIVTNV EYGQEWKIKKEDISDWMYTRGDKIYGGYTIDPLLVTYPKEEADELRAKLVR" repeat_region 2021194..2021221 /note="REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2021231..2021992) /gene="yegK" /locus_tag="b2072" /gene_synonym="ECK2066" /gene_synonym="JW2057" /db_xref="EcoGene:EG14054" CDS complement(2021231..2021992) /gene="yegK" /locus_tag="b2072" /gene_synonym="ECK2066" /gene_synonym="JW2057" /codon_start=1 /transl_table=11 /product="ser/thr phosphatase-related protein" /protein_id="AAC75133.1" /db_xref="GI:1788387" /db_xref="ASAP:ABE-0006865" /db_xref="UniProtKB/Swiss-Prot:P76395" /db_xref="EcoGene:EG14054" /translation="MSWRLVYASTVGTSHISADLPCQDACQMQIAWLNDQQPLLSVFV ADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLNDVLATNMVLTIRQRLFAEAEA KELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMAGEYANMTHFI TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLAAATQE QLDLLPELLKQFLSSPAVNERTDDDKTLALALWAE" gene complement(2021989..2022648) /gene="yegL" /locus_tag="b2073" /gene_synonym="ECK2067" /gene_synonym="JW2058" /db_xref="EcoGene:EG14055" CDS complement(2021989..2022648) /gene="yegL" /locus_tag="b2073" /gene_synonym="ECK2067" /gene_synonym="JW2058" /codon_start=1 /transl_table=11 /product="VMA domain protein" /protein_id="AAC75134.1" /db_xref="GI:1788388" /db_xref="ASAP:ABE-0006867" /db_xref="UniProtKB/Swiss-Prot:P76396" /db_xref="EcoGene:EG14055" /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGL VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIG VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS V" gene 2022829..2022971 /gene="sibA" /locus_tag="b4436" /gene_synonym="ECK2068" /gene_synonym="JWR0241" /gene_synonym="QUAD1a" /gene_synonym="ryeC" /gene_synonym="tp11" /db_xref="EcoGene:EG31151" ncRNA 2022829..2022971 /ncRNA_class="antisense_RNA" /gene="sibA" /locus_tag="b4436" /gene_synonym="ECK2068" /gene_synonym="JWR0241" /gene_synonym="QUAD1a" /gene_synonym="ryeC" /gene_synonym="tp11" /product="sRNA antisense regulator of toxic IbsA protein" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047256" /db_xref="EcoGene:EG31151" gene complement(2022869..2022928) /gene="ibsA" /locus_tag="b4667" /gene_synonym="ECK4482" /db_xref="EcoGene:EG14472" CDS complement(2022869..2022928) /gene="ibsA" /locus_tag="b4667" /gene_synonym="ECK4482" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO59999.1" /db_xref="GI:226510956" /db_xref="UniProtKB/Swiss-Prot:C1P607" /db_xref="EcoGene:EG14472" /translation="MMKHVIILVILLVISFQAY" gene 2023164..2023299 /gene="sibB" /locus_tag="b4437" /gene_synonym="ECK2069" /gene_synonym="JWR0242" /gene_synonym="QUAD1b" /gene_synonym="ryeD" /gene_synonym="tpe60" /db_xref="EcoGene:EG31152" ncRNA 2023164..2023299 /ncRNA_class="antisense_RNA" /gene="sibB" /locus_tag="b4437" /gene_synonym="ECK2069" /gene_synonym="JWR0242" /gene_synonym="QUAD1b" /gene_synonym="ryeD" /gene_synonym="tpe60" /product="sRNA antisense regulator of toxic IbsB protein" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047257" /db_xref="EcoGene:EG31152" gene complement(2023201..2023257) /gene="ibsB" /locus_tag="b4668" /gene_synonym="ECK4483" /db_xref="EcoGene:EG14473" CDS complement(2023201..2023257) /gene="ibsB" /locus_tag="b4668" /gene_synonym="ECK4483" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO60000.1" /db_xref="GI:226510957" /db_xref="UniProtKB/Swiss-Prot:C1P608" /db_xref="EcoGene:EG14473" /translation="MMKLLIIVVLLVISFPAY" gene 2023536..2024783 /gene="mdtA" /locus_tag="b2074" /gene_synonym="ECK2070" /gene_synonym="JW5338" /gene_synonym="yegM" /db_xref="EcoGene:EG14056" CDS 2023536..2024783 /gene="mdtA" /locus_tag="b2074" /gene_synonym="ECK2070" /gene_synonym="JW5338" /gene_synonym="yegM" /function="putative membrane; Not classified" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="multidrug efflux system, subunit A" /protein_id="AAC75135.2" /db_xref="GI:87082036" /db_xref="ASAP:ABE-0006872" /db_xref="UniProtKB/Swiss-Prot:P76397" /db_xref="EcoGene:EG14056" /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQ QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALH FQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLV SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL LSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNE GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE AQSATTPEEKATSREYAKKGARS" gene 2024783..2027905 /gene="mdtB" /locus_tag="b2075" /gene_synonym="ECK2071" /gene_synonym="JW2060" /gene_synonym="yegN" /db_xref="EcoGene:EG14057" CDS 2024783..2027905 /gene="mdtB" /locus_tag="b2075" /gene_synonym="ECK2071" /gene_synonym="JW2060" /gene_synonym="yegN" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="multidrug efflux system, subunit B" /protein_id="AAC75136.1" /db_xref="GI:1788390" /db_xref="ASAP:ABE-0006874" /db_xref="UniProtKB/Swiss-Prot:P76398" /db_xref="EcoGene:EG14057" /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA LYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIAKI EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGST LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALLIAGS ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQACLLRFRPILMTT LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK SRFARHEEEA" gene 2027906..2030983 /gene="mdtC" /locus_tag="b2076" /gene_synonym="ECK2072" /gene_synonym="JW2061" /gene_synonym="yegO" /db_xref="EcoGene:EG14058" CDS 2027906..2030983 /gene="mdtC" /locus_tag="b2076" /gene_synonym="ECK2072" /gene_synonym="JW2061" /gene_synonym="yegO" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="multidrug efflux system, subunit C" /protein_id="AAC75137.1" /db_xref="GI:1788391" /db_xref="ASAP:ABE-0006877" /db_xref="UniProtKB/Swiss-Prot:P76399" /db_xref="EcoGene:EG14058" /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV IIVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQG ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV EQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMAL TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE" gene 2030984..2032399 /gene="iceT" /locus_tag="b2077" /gene_synonym="ECK2073" /gene_synonym="JW2062" /gene_synonym="mdtD" /gene_synonym="yegB" /db_xref="EcoGene:EG12136" CDS 2030984..2032399 /gene="iceT" /locus_tag="b2077" /gene_synonym="ECK2073" /gene_synonym="JW2062" /gene_synonym="mdtD" /gene_synonym="yegB" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative citrate/iron-citrate/zinc-citrate efflux transporter" /protein_id="AAC75138.1" /db_xref="GI:1788392" /db_xref="ASAP:ABE-0006879" /db_xref="UniProtKB/Swiss-Prot:P36554" /db_xref="EcoGene:EG12136" /translation="MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESP LHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELL LARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY ASWHWIFLINIPVGIIGAIATLLLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSK GTGLSPLTIAGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT LGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS LLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDSGTTQTVFMYTWLSMALIIALPAFIF ARVPNDTHQNVAISRRKRSAQ" gene 2032396..2033799 /gene="baeS" /locus_tag="b2078" /gene_synonym="ECK2074" /gene_synonym="JW2063" /db_xref="EcoGene:EG11617" CDS 2032396..2033799 /gene="baeS" /locus_tag="b2078" /gene_synonym="ECK2074" /gene_synonym="JW2063" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="sensor protein (for BaeR); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with BaeR" /protein_id="AAC75139.1" /db_xref="GI:1788393" /db_xref="ASAP:ABE-0006882" /db_xref="UniProtKB/Swiss-Prot:P30847" /db_xref="EcoGene:EG11617" /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLQISAGQRDKTVRLTFAD SAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG VSITVELPLERDLQREV" gene 2033796..2034518 /gene="baeR" /locus_tag="b2079" /gene_synonym="ECK2075" /gene_synonym="JW2064" /db_xref="EcoGene:EG11618" CDS 2033796..2034518 /gene="baeR" /locus_tag="b2079" /gene_synonym="ECK2075" /gene_synonym="JW2064" /function="regulator; RNA synthesis, modification, DNA transcription" /note="transcriptional response regulatory protein (sensor BaeS); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with BaeS" /protein_id="AAC75140.1" /db_xref="GI:1788394" /db_xref="ASAP:ABE-0006884" /db_xref="UniProtKB/Swiss-Prot:P69228" /db_xref="EcoGene:EG11618" /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE QSFIRAVYGVGYRWEADACRIV" repeat_region 2034537..2034616 /note="REP149 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 2034709..2035041 /gene="yegP" /locus_tag="b2080" /gene_synonym="ECK2076" /gene_synonym="JW5339" /db_xref="EcoGene:EG14059" CDS 2034709..2035041 /gene="yegP" /locus_tag="b2080" /gene_synonym="ECK2076" /gene_synonym="JW5339" /codon_start=1 /transl_table=11 /product="UPF0339 family protein" /protein_id="AAC75141.2" /db_xref="GI:87082037" /db_xref="ASAP:ABE-0006888" /db_xref="UniProtKB/Swiss-Prot:P76402" /db_xref="EcoGene:EG14059" /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKTSAEKGIA SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT SQTVKDNT" gene 2035188..2036549 /gene="yegQ" /locus_tag="b2081" /gene_synonym="ECK2077" /gene_synonym="JW2066" /db_xref="EcoGene:EG14060" CDS 2035188..2036549 /gene="yegQ" /locus_tag="b2081" /gene_synonym="ECK2077" /gene_synonym="JW2066" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC75142.1" /db_xref="GI:1788397" /db_xref="ASAP:ABE-0006891" /db_xref="UniProtKB/Swiss-Prot:P76403" /db_xref="EcoGene:EG14060" /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM LVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM TPQGNINFTLEHMENAKGEAMPIAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP HGK" gene 2036634..2036720 /gene="cyaR" /locus_tag="b4438" /gene_synonym="ECK2078" /gene_synonym="JWR0243" /gene_synonym="ryeE" /db_xref="EcoGene:EG31153" ncRNA 2036634..2036720 /ncRNA_class="antisense_RNA" /gene="cyaR" /locus_tag="b4438" /gene_synonym="ECK2078" /gene_synonym="JWR0243" /gene_synonym="ryeE" /product="sRNA antisense regulator of ompX mRNA instability, Hfq-dependent, cAMP-induced" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047258" /db_xref="EcoGene:EG31153" misc_feature complement(2036718..2037346) /note="cryptic prophage PR-X" gene complement(2036822..2037040) /gene="ogrK" /locus_tag="b2082" /gene_synonym="ECK2079" /gene_synonym="JW2067" /db_xref="EcoGene:EG12425" CDS complement(2036822..2037040) /gene="ogrK" /locus_tag="b2082" /gene_synonym="ECK2079" /gene_synonym="JW2067" /function="Phage or Prophage Related" /note="prophage P2 ogr protein" /codon_start=1 /transl_table=11 /product="orphan Ogr protein, positive regulator of P2 growth" /protein_id="AAC75143.1" /db_xref="GI:1788398" /db_xref="ASAP:ABE-0006893" /db_xref="UniProtKB/Swiss-Prot:P37057" /db_xref="EcoGene:EG12425" /translation="MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYES VQRYIVKPGEVHVVRPHPLPSGQQIMWM" gene complement(2037122..2037334) /gene="yegZ" /locus_tag="b2083" /gene_synonym="ECK2080" /gene_synonym="JW5886" /pseudo /db_xref="EcoGene:EG14309" CDS complement(2037122..2037334) /gene="yegZ" /locus_tag="b2083" /gene_synonym="ECK2080" /gene_synonym="JW5886" /note="pseudogene, gpD phage P2-like protein D" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006896" /db_xref="EcoGene:EG14309" gene complement(2037509..2037826) /gene="yegR" /locus_tag="b2085" /gene_synonym="ECK2081" /gene_synonym="JW5837" /db_xref="EcoGene:EG14061" CDS complement(2037509..2037826) /gene="yegR" /locus_tag="b2085" /gene_synonym="ECK2081" /gene_synonym="JW5837" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75146.2" /db_xref="GI:87082038" /db_xref="ASAP:ABE-0006907" /db_xref="UniProtKB/Swiss-Prot:P76406" /db_xref="EcoGene:EG14061" /translation="MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDN QYYTEAEASLARGRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFK CGE" gene 2038232..2039131 /gene="yegS" /locus_tag="b2086" /gene_synonym="ECK2082" /gene_synonym="JW2070" /db_xref="EcoGene:EG14367" CDS 2038232..2039131 /gene="yegS" /locus_tag="b2086" /gene_synonym="ECK2082" /gene_synonym="JW2070" /codon_start=1 /transl_table=11 /product="phosphatidylglycerol kinase, metal-dependent" /protein_id="AAC75147.1" /db_xref="GI:1788402" /db_xref="ASAP:ABE-0006911" /db_xref="UniProtKB/Swiss-Prot:P76407" /db_xref="EcoGene:EG14367" /translation="MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG DAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATS VGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALG SVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALIND GLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQ NFHIEILPAALRCRLPPDCPLLR" repeat_region 2039170..2039203 /note="REP150 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(join(2039213..2039687,2040949..2041247)) /gene="gatR" /locus_tag="b4498" /gene_synonym="ECK2083" /gene_synonym="JW2074" /gene_synonym="JW5340" /pseudo /db_xref="EcoGene:EG12162" CDS complement(join(2039213..2039687,2040949..2041247)) /gene="gatR" /locus_tag="b4498" /gene_synonym="ECK2083" /gene_synonym="JW2074" /gene_synonym="JW5340" /note="pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006914" /db_xref="ASAP:ABE-0006921" /db_xref="ASAP:ABE-0285099" /db_xref="UniProtKB/Swiss-Prot:P36930" /db_xref="EcoGene:EG12162" mobile_element 2039691..2040948 /mobile_element_type="insertion sequence:IS3E" gene 2039756..2040055 /gene="insE1" /locus_tag="b2088" /gene_synonym="ECK0298" /db_xref="EcoGene:EG40005" CDS 2039756..2040055 /gene="insE1" /locus_tag="b2088" /gene_synonym="ECK0298" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase A" /protein_id="AAC75149.2" /db_xref="GI:226510958" /db_xref="ASAP:ABE-0006917" /db_xref="UniProtKB/Swiss-Prot:P0CF70" /db_xref="EcoGene:EG40005" /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK" gene 2040052..2040918 /gene="insF1" /locus_tag="b2089" /gene_synonym="ECK0299" /db_xref="EcoGene:EG40006" CDS 2040052..2040918 /gene="insF1" /locus_tag="b2089" /gene_synonym="ECK0299" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS3 transposase B" /protein_id="AAC75150.1" /db_xref="GI:1788405" /db_xref="ASAP:ABE-0006919" /db_xref="UniProtKB/Swiss-Prot:P0CF83" /db_xref="EcoGene:EG40006" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(2041353..2042393) /gene="gatD" /locus_tag="b2091" /gene_synonym="ECK2084" /gene_synonym="JW2075" /db_xref="EcoGene:EG12417" CDS complement(2041353..2042393) /gene="gatD" /locus_tag="b2091" /gene_synonym="ECK2084" /gene_synonym="JW2075" /EC_number="1.1.1.251" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="galactitol-1-phosphate dehydrogenase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding" /protein_id="AAC75152.1" /db_xref="GI:1788407" /db_xref="ASAP:ABE-0006924" /db_xref="UniProtKB/Swiss-Prot:P0A9S3" /db_xref="EcoGene:EG12417" /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAP QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIA RNAMPGKVLLIP" gene complement(2042441..2043796) /gene="gatC" /locus_tag="b2092" /gene_synonym="ECK2085" /gene_synonym="JW2076" /pseudo /db_xref="EcoGene:EG12416" CDS complement(join(2042441..2042882,2042885..2043796)) /gene="gatC" /locus_tag="b2092" /gene_synonym="ECK2085" /gene_synonym="JW2076" /note="pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006928" /db_xref="UniProtKB/Swiss-Prot:P69831" /db_xref="EcoGene:EG12416" gene complement(2043800..2044084) /gene="gatB" /locus_tag="b2093" /gene_synonym="ECK2086" /gene_synonym="JW2077" /db_xref="EcoGene:EG12415" CDS complement(2043800..2044084) /gene="gatB" /locus_tag="b2093" /gene_synonym="ECK2086" /gene_synonym="JW2077" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /note="galactitol-specific enzyme IIB of phosphotransferase system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="galactitol-specific enzyme IIB component of PTS" /protein_id="AAC75154.1" /db_xref="GI:1788409" /db_xref="ASAP:ABE-0006930" /db_xref="UniProtKB/Swiss-Prot:P37188" /db_xref="EcoGene:EG12415" /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI ETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG" gene complement(2044115..2044567) /gene="gatA" /locus_tag="b2094" /gene_synonym="ECK2087" /gene_synonym="JW2078" /gene_synonym="JW2081" /db_xref="EcoGene:EG12414" CDS complement(2044115..2044567) /gene="gatA" /locus_tag="b2094" /gene_synonym="ECK2087" /gene_synonym="JW2078" /gene_synonym="JW2081" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="galactitol-specific enzyme IIA of phosphotransferase system; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="galactitol-specific enzyme IIA component of PTS" /protein_id="AAC75155.1" /db_xref="GI:1788410" /db_xref="ASAP:ABE-0006932" /db_xref="UniProtKB/Swiss-Prot:P69828" /db_xref="EcoGene:EG12414" /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALI VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE" gene complement(2044577..2045839) /gene="gatZ" /locus_tag="b2095" /gene_synonym="ECK2088" /gene_synonym="JW2082" /db_xref="EcoGene:EG12418" CDS complement(2044577..2045839) /gene="gatZ" /locus_tag="b2095" /gene_synonym="ECK2088" /gene_synonym="JW2082" /EC_number="4.1.2.40" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 17895580" /note="putative tagatose 6-phosphate kinase 1; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="D-tagatose 1,6-bisphosphate aldolase 2, subunit" /protein_id="AAC75156.1" /db_xref="GI:1788411" /db_xref="ASAP:ABE-0006934" /db_xref="UniProtKB/Swiss-Prot:P0C8J8" /db_xref="EcoGene:EG12418" /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA MEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIA IVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQS GELSAIPHQLIMDKIYDVLRAYRYGCAE" gene complement(2045868..2046722) /gene="gatY" /locus_tag="b2096" /gene_synonym="ECK2089" /gene_synonym="JW5343" /gene_synonym="yegF" /db_xref="EcoGene:EG12419" CDS complement(2045868..2046722) /gene="gatY" /locus_tag="b2096" /gene_synonym="ECK2089" /gene_synonym="JW5343" /gene_synonym="yegF" /EC_number="4.1.2.40" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 10094700,17895580" /note="tagatose-bisphosphate aldolase 1; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit" /protein_id="AAC75157.2" /db_xref="GI:87082041" /db_xref="ASAP:ABE-0006938" /db_xref="UniProtKB/Swiss-Prot:P0C8J6" /db_xref="EcoGene:EG12419" /translation="MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQA REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIA DCGCEGRA" repeat_region 2046926..2047002 /note="REP151 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2047030..2048082) /gene="fbaB" /locus_tag="b2097" /gene_synonym="dhnA" /gene_synonym="ECK2090" /gene_synonym="JW5344" /db_xref="EcoGene:EG14062" CDS complement(2047030..2048082) /gene="fbaB" /locus_tag="b2097" /gene_synonym="dhnA" /gene_synonym="ECK2090" /gene_synonym="JW5344" /EC_number="4.1.2.13" /note="GO_process: GO:0006096 - glycolysis" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase class I" /protein_id="AAC75158.2" /db_xref="GI:87082042" /db_xref="ASAP:ABE-0006941" /db_xref="UniProtKB/Swiss-Prot:P0A991" /db_xref="EcoGene:EG14062" /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL INAVQDVYLDSKITIA" gene 2048339..2049616 /gene="yegT" /locus_tag="b2098" /gene_synonym="ECK2091" /gene_synonym="JW2085" /db_xref="EcoGene:EG14063" CDS 2048339..2049616 /gene="yegT" /locus_tag="b2098" /gene_synonym="ECK2091" /gene_synonym="JW2085" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="putative nucleoside permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="nucleoside transporter, low affinity" /protein_id="AAC75159.1" /db_xref="GI:1788415" /db_xref="ASAP:ABE-0006946" /db_xref="UniProtKB/Swiss-Prot:P76417" /db_xref="EcoGene:EG14063" /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK" gene 2049613..2050617 /gene="yegU" /locus_tag="b2099" /gene_synonym="ECK2092" /gene_synonym="JW2086" /db_xref="EcoGene:EG14064" CDS 2049613..2050617 /gene="yegU" /locus_tag="b2099" /gene_synonym="ECK2092" /gene_synonym="JW2086" /codon_start=1 /transl_table=11 /product="ADP-ribosylglycohydrolase family protein" /protein_id="AAC75160.1" /db_xref="GI:1788416" /db_xref="ASAP:ABE-0006948" /db_xref="UniProtKB/Swiss-Prot:P76418" /db_xref="EcoGene:EG14064" /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKN VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRITTFSASLAAR LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN LGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV " gene 2050614..2051579 /gene="yegV" /locus_tag="b2100" /gene_synonym="ECK2093" /gene_synonym="JW2087" /db_xref="EcoGene:EG14065" CDS 2050614..2051579 /gene="yegV" /locus_tag="b2100" /gene_synonym="ECK2093" /gene_synonym="JW2087" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative kinase" /protein_id="AAC75161.1" /db_xref="GI:1788417" /db_xref="ASAP:ABE-0006950" /db_xref="UniProtKB/Swiss-Prot:P76419" /db_xref="EcoGene:EG14065" /translation="MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYALPWRGCDIE LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEMIRNRMAKEGLISLIDNAE GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV" gene complement(2051553..2052299) /gene="yegW" /locus_tag="b2101" /gene_synonym="ECK2094" /gene_synonym="JW2088" /db_xref="EcoGene:EG14066" CDS complement(2051553..2052299) /gene="yegW" /locus_tag="b2101" /gene_synonym="ECK2094" /gene_synonym="JW2088" /function="putative regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75162.1" /db_xref="GI:1788418" /db_xref="ASAP:ABE-0006952" /db_xref="UniProtKB/Swiss-Prot:P0ACM5" /db_xref="EcoGene:EG14066" /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI KQVALDQQQRPIEYSISHCRSDLYVFVCEE" gene complement(2052351..2053169) /gene="yegX" /locus_tag="b2102" /gene_synonym="ECK2095" /gene_synonym="JW5345" /db_xref="EcoGene:EG14067" CDS complement(2052351..2053169) /gene="yegX" /locus_tag="b2102" /gene_synonym="ECK2095" /gene_synonym="JW5345" /codon_start=1 /transl_table=11 /product="putative family 25 glycosyl hydrolase" /protein_id="AAC75163.2" /db_xref="GI:87082043" /db_xref="ASAP:ABE-0006955" /db_xref="UniProtKB/Swiss-Prot:P76421" /db_xref="EcoGene:EG14067" /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITD YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVL DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP" gene complement(2053234..2054034) /gene="thiD" /locus_tag="b2103" /gene_synonym="ECK2096" /gene_synonym="JW2090" /gene_synonym="thiA" /gene_synonym="thiJ" /gene_synonym="thiN" /db_xref="EcoGene:EG14068" CDS complement(2053234..2054034) /gene="thiD" /locus_tag="b2103" /gene_synonym="ECK2096" /gene_synonym="JW2090" /gene_synonym="thiA" /gene_synonym="thiJ" /gene_synonym="thiN" /EC_number="2.7.1.49" /EC_number="2.7.4.7" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamine" /note="phosphomethylpyrimidine kinase; GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase" /protein_id="AAC75164.1" /db_xref="GI:1788420" /db_xref="ASAP:ABE-0006958" /db_xref="UniProtKB/Swiss-Prot:P76422" /db_xref="EcoGene:EG14068" /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW" gene complement(2054031..2054819) /gene="thiM" /locus_tag="b2104" /gene_synonym="ECK2097" /gene_synonym="JW2091" /db_xref="EcoGene:EG14069" CDS complement(2054031..2054819) /gene="thiM" /locus_tag="b2104" /gene_synonym="ECK2097" /gene_synonym="JW2091" /EC_number="2.7.1.50" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamine" /note="GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="hydoxyethylthiazole kinase" /protein_id="AAC75165.1" /db_xref="GI:1788421" /db_xref="ASAP:ABE-0006960" /db_xref="UniProtKB/Swiss-Prot:P76423" /db_xref="EcoGene:EG14069" /translation="MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL ARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA" gene complement(2055042..2055314) /gene="rcnR" /locus_tag="b2105" /gene_synonym="ECK2098" /gene_synonym="JW2092" /gene_synonym="yohL" /db_xref="EcoGene:EG14070" CDS complement(2055042..2055314) /gene="rcnR" /locus_tag="b2105" /gene_synonym="ECK2098" /gene_synonym="JW2092" /gene_synonym="yohL" /codon_start=1 /transl_table=11 /product="transcriptional repressor of rcnA" /protein_id="AAC75166.1" /db_xref="GI:1788422" /db_xref="ASAP:ABE-0006964" /db_xref="UniProtKB/Swiss-Prot:P64530" /db_xref="EcoGene:EG14070" /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK" gene 2055435..2056259 /gene="rcnA" /locus_tag="b2106" /gene_synonym="ECK2099" /gene_synonym="JW2093" /gene_synonym="yohM" /db_xref="EcoGene:EG14071" CDS 2055435..2056259 /gene="rcnA" /locus_tag="b2106" /gene_synonym="ECK2099" /gene_synonym="JW2093" /gene_synonym="yohM" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="membrane protein conferring nickel and cobalt resistance" /protein_id="AAC75167.1" /db_xref="GI:1788423" /db_xref="ASAP:ABE-0006968" /db_xref="UniProtKB/Swiss-Prot:P76425" /db_xref="EcoGene:EG14071" /translation="MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIA IKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTA FWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHAND IKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLA LTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR" gene 2056478..2056816 /gene="rcnB" /locus_tag="b2107" /gene_synonym="ECK2100" /gene_synonym="JW5346" /gene_synonym="yohN" /db_xref="EcoGene:EG14072" CDS 2056478..2056816 /gene="rcnB" /locus_tag="b2107" /gene_synonym="ECK2100" /gene_synonym="JW5346" /gene_synonym="yohN" /codon_start=1 /transl_table=11 /product="periplasmic modulator of Ni and Co efflux" /protein_id="AAC75168.2" /db_xref="GI:87082044" /db_xref="ASAP:ABE-0006970" /db_xref="UniProtKB/Swiss-Prot:P64534" /db_xref="EcoGene:EG14072" /translation="MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIA DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK AYDGEIFYHR" gene complement(2056898..2057932) /gene="yehA" /locus_tag="b2108" /gene_synonym="ECK2101" /gene_synonym="JW2095" /db_xref="EcoGene:EG11987" CDS complement(2056898..2057932) /gene="yehA" /locus_tag="b2108" /gene_synonym="ECK2101" /gene_synonym="JW2095" /function="putative structural component; Surface structures" /note="putative type-1 fimbrial protein" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75169.1" /db_xref="GI:1788426" /db_xref="ASAP:ABE-0006972" /db_xref="UniProtKB/Swiss-Prot:P33340" /db_xref="EcoGene:EG11987" /translation="MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQ MATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTS FTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGN KATINSKQGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFIL ESNGSPVTLLNITNSSKGYTNLKEVAAKSKLTDTTVSIPITASYYVYDTNKVKSGALE ATALINVKYD" gene complement(2057948..2060428) /gene="yehB" /locus_tag="b2109" /gene_synonym="ECK2102" /gene_synonym="JW2096" /db_xref="EcoGene:EG11988" CDS complement(2057948..2060428) /gene="yehB" /locus_tag="b2109" /gene_synonym="ECK2102" /gene_synonym="JW2096" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC75170.1" /db_xref="GI:1788427" /db_xref="ASAP:ABE-0006974" /db_xref="UniProtKB/Swiss-Prot:P33341" /db_xref="EcoGene:EG11988" /translation="MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANI RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGK QCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGF AQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVT IEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQ PGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGW NTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRT FNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLW RDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPFDWGDDV STPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANL TWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDA YVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVL VNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVN VAIDKQQGLSCTITFGKEIDESRNYICQ" gene complement(2060444..2061163) /gene="yehC" /locus_tag="b2110" /gene_synonym="ECK2103" /gene_synonym="JW2097" /db_xref="EcoGene:EG11989" CDS complement(2060444..2061163) /gene="yehC" /locus_tag="b2110" /gene_synonym="ECK2103" /gene_synonym="JW2097" /function="putative factor; Surface structures" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC75171.1" /db_xref="GI:1788428" /db_xref="ASAP:ABE-0006978" /db_xref="UniProtKB/Swiss-Prot:P33342" /db_xref="EcoGene:EG11989" /translation="MAAIPWRPFNLRGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIY PAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQV KIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVN KATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSN NANNWHLTIIDDHGNYISDKI" gene complement(2061198..2061740) /gene="yehD" /locus_tag="b2111" /gene_synonym="ECK2104" /gene_synonym="JW2098" /db_xref="EcoGene:EG11990" CDS complement(2061198..2061740) /gene="yehD" /locus_tag="b2111" /gene_synonym="ECK2104" /gene_synonym="JW2098" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75172.1" /db_xref="GI:1788429" /db_xref="ASAP:ABE-0006980" /db_xref="UniProtKB/Swiss-Prot:P33343" /db_xref="EcoGene:EG11990" /translation="MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFE AGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDK ITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLT DNSVQSGDVLSSLVMRVAQD" gene complement(2062033..2062314) /gene="yehE" /locus_tag="b2112" /gene_synonym="ECK2105" /gene_synonym="JW2099" /db_xref="EcoGene:EG11991" CDS complement(2062033..2062314) /gene="yehE" /locus_tag="b2112" /gene_synonym="ECK2105" /gene_synonym="JW2099" /codon_start=1 /transl_table=11 /product="DUF2574 family protein" /protein_id="AAC75173.1" /db_xref="GI:1788430" /db_xref="ASAP:ABE-0006984" /db_xref="UniProtKB/Swiss-Prot:P33344" /db_xref="EcoGene:EG11991" /translation="MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMV NGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD" gene complement(2062577..2063686) /gene="mrp" /locus_tag="b2113" /gene_synonym="apbC" /gene_synonym="ECK2106" /gene_synonym="JW2100" /db_xref="EcoGene:EG10611" CDS complement(2062577..2063686) /gene="mrp" /locus_tag="b2113" /gene_synonym="apbC" /gene_synonym="ECK2106" /gene_synonym="JW2100" /function="putative enzyme; Not classified" /note="putative ATPase" /codon_start=1 /transl_table=11 /product="antiporter inner membrane protein" /protein_id="AAC75174.2" /db_xref="GI:87082045" /db_xref="ASAP:ABE-0006987" /db_xref="UniProtKB/Swiss-Prot:P0AF08" /db_xref="EcoGene:EG10611" /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV" gene 2063818..2065851 /gene="metG" /locus_tag="b2114" /gene_synonym="ECK2107" /gene_synonym="JW2101" /db_xref="EcoGene:EG10586" CDS 2063818..2065851 /gene="metG" /locus_tag="b2114" /gene_synonym="ECK2107" /gene_synonym="JW2101" /EC_number="6.1.1.10" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="methionine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /protein_id="AAC75175.1" /db_xref="GI:1788432" /db_xref="ASAP:ABE-0006991" /db_xref="UniProtKB/Swiss-Prot:P00959" /db_xref="EcoGene:EG10586" /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKM SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN TELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDP IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK" gene 2065992..2069787 /gene="yehH" /locus_tag="b4499" /gene_synonym="dinO" /gene_synonym="ECK2108" /gene_synonym="JW2102" /gene_synonym="JW5915" /gene_synonym="JW5916" /gene_synonym="molR" /gene_synonym="sosF" /gene_synonym="yehF" /gene_synonym="yehG" /pseudo /db_xref="EcoGene:EG11992" CDS join(2065992..2068838,2068840..2069787) /gene="yehH" /locus_tag="b4499" /gene_synonym="dinO" /gene_synonym="ECK2108" /gene_synonym="JW2102" /gene_synonym="JW5915" /gene_synonym="JW5916" /gene_synonym="molR" /gene_synonym="sosF" /gene_synonym="yehF" /gene_synonym="yehG" /note="DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0006997" /db_xref="ASAP:ABE-0006999" /db_xref="ASAP:ABE-0007001" /db_xref="ASAP:ABE-0285100" /db_xref="UniProtKB/Swiss-Prot:P33345" /db_xref="EcoGene:EG11992" gene 2069797..2073429 /gene="yehI" /locus_tag="b2118" /gene_synonym="ECK2109" /gene_synonym="JW2105" /db_xref="EcoGene:EG11995" CDS 2069797..2073429 /gene="yehI" /locus_tag="b2118" /gene_synonym="ECK2109" /gene_synonym="JW2105" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="DUF4132 domain-containing protein" /protein_id="AAC75179.1" /db_xref="GI:1788436" /db_xref="ASAP:ABE-0007003" /db_xref="UniProtKB/Swiss-Prot:P33346" /db_xref="EcoGene:EG11995" /translation="MDKELPWLADNAQLELKYKKGKTPLSHRRWPGEPVSVITGSLIQ TLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQ NDSQQLLDEIVQQEGLEYATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETY NEFDLRLRKHLSLAEESCWQRCADKLIAALPGINKVRRPFIALILPEKPEIANELVGL ECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDIFSDREASYMSHENHFGYAACAALL REQGLAAIPRLAMYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFP HATLAALAELLALTEPPARPGYPIIEDKKLPAQQKARDEYWRTLLQTLMASQPQLAAE VMPWLSTQPQSVLKSYLSAPPKPVIDGTDNSNLPEILVSPPWRSKKKMTAPRLDLAPL ELTPQVYWQPGEQERLAATEPARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNY ILPGKLDAARNSLFVQWHYYQGRVEEILNGWNSPEAQLAEQALRSGHIEALINIWEND NYSHYRPEKSVWNLYLLAQLPREMALTFWLRINEKKHLFAGEDYFLSILGLDALPGLL LAFSHRPKETFPLILNFGATELALPVAHVWRRFAAQRDLARQWILQWPEHTASALIPL VFTKPSDNSEAALLALRLLYEQGHGELLQTVANRWQRTDVWSALEQLLKQGPMDIYPA RIPKAPDFWHPQMWSRPRLITNNQTVTNDALEIIGEMLRFTQGGRFYSGLEQLKTFCQ PQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSAR AVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRL VPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPE ALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFTRLVTQRLIWG VYPANEPRCLLKAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLF ADYEIMPPFRQLSRRTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWESGYEDAF VYNLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSEALSA PDVIFH" gene 2073490..2073807 /gene="yehK" /locus_tag="b4541" /gene_synonym="ECK2110" /gene_synonym="JW2106" /db_xref="EcoGene:EG11997" CDS 2073490..2073807 /gene="yehK" /locus_tag="b4541" /gene_synonym="ECK2110" /gene_synonym="JW2106" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18687.1" /db_xref="GI:87082048" /db_xref="ASAP:ABE-0285062" /db_xref="UniProtKB/Swiss-Prot:P33347" /db_xref="EcoGene:EG11997" /translation="MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLER FRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQ EIE" gene 2074114..2075202 /gene="yehL" /locus_tag="b2119" /gene_synonym="ECK2111" /gene_synonym="JW5349" /db_xref="EcoGene:EG11998" CDS 2074114..2075202 /gene="yehL" /locus_tag="b2119" /gene_synonym="ECK2111" /gene_synonym="JW5349" /note="GO_function: GO:0004009 - ATP-binding cassette (ABC) transporter activity" /codon_start=1 /transl_table=11 /product="putative hexameric AAA+ MoxR family ATPase" /protein_id="AAC75180.2" /db_xref="GI:87082049" /db_xref="ASAP:ABE-0007006" /db_xref="UniProtKB/Swiss-Prot:P33348" /db_xref="EcoGene:EG11998" /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR AFILGDEAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR TPLEVQDCLLGMLSDRVMTGPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEK KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVECIAGTIVKDNEEDRAR LRRYFEQRVATHKEAHWQAYYQARHRLP" gene 2075213..2077492 /gene="yehM" /locus_tag="b2120" /gene_synonym="ECK2112" /gene_synonym="JW2108" /gene_synonym="yehN" /gene_synonym="yehO" /db_xref="EcoGene:EG11999" CDS 2075213..2077492 /gene="yehM" /locus_tag="b2120" /gene_synonym="ECK2112" /gene_synonym="JW2108" /gene_synonym="yehN" /gene_synonym="yehO" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75181.1" /db_xref="GI:1788439" /db_xref="ASAP:ABE-0007008" /db_xref="UniProtKB/Swiss-Prot:P33349" /db_xref="EcoGene:EG11999" /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL PCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFA QLRGDASGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQKIN KPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQKAGEQLLKT ILTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE LTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAAL IEAACFGATLQEAARNKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCATIDRTLWLCESNGRPDEK EFHAHLHSWQALCHILRDLHSGVNLPGVSLSAAVALLERRSQAIHAPALDRGAALGAL MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS EADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH QQLEQQALASLQNWGVFHV" gene 2077485..2078621 /gene="yehP" /locus_tag="b2121" /gene_synonym="ECK2113" /gene_synonym="JW5350" /db_xref="EcoGene:EG12002" CDS 2077485..2078621 /gene="yehP" /locus_tag="b2121" /gene_synonym="ECK2113" /gene_synonym="JW5350" /codon_start=1 /transl_table=11 /product="VMA domain putative YehL ATPase stimulator" /protein_id="AAC75182.1" /db_xref="GI:1788440" /db_xref="ASAP:ABE-0007013" /db_xref="UniProtKB/Swiss-Prot:P33352" /db_xref="EcoGene:EG12002" /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW LYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVV TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFS GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV LLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQ LGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGL AALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS" gene 2078618..2080618 /gene="yehQ" /locus_tag="b2122" /gene_synonym="ECK2114" /gene_synonym="JW2110" /pseudo /db_xref="EcoGene:EG12003" CDS 2078618..2080618 /gene="yehQ" /locus_tag="b2122" /gene_synonym="ECK2114" /gene_synonym="JW2110" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007015" /db_xref="UniProtKB/Swiss-Prot:P33353" /db_xref="EcoGene:EG12003" gene 2080743..2081204 /gene="yehR" /locus_tag="b2123" /gene_synonym="ECK2115" /gene_synonym="JW5351" /db_xref="EcoGene:EG12004" CDS 2080743..2081204 /gene="yehR" /locus_tag="b2123" /gene_synonym="ECK2115" /gene_synonym="JW5351" /function="enzyme; Transport of small molecules: Cations" /codon_start=1 /transl_table=11 /product="lipoprotein, DUF1307 family" /protein_id="AAC75184.2" /db_xref="GI:87082051" /db_xref="ASAP:ABE-0007018" /db_xref="UniProtKB/Swiss-Prot:P33354" /db_xref="EcoGene:EG12004" /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT YVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK" gene complement(2081244..2081714) /gene="yehS" /locus_tag="b2124" /gene_synonym="ECK2116" /gene_synonym="JW2112" /db_xref="EcoGene:EG12005" CDS complement(2081244..2081714) /gene="yehS" /locus_tag="b2124" /gene_synonym="ECK2116" /gene_synonym="JW2112" /codon_start=1 /transl_table=11 /product="DUF1456 family protein" /protein_id="AAC75185.1" /db_xref="GI:1788443" /db_xref="ASAP:ABE-0007021" /db_xref="UniProtKB/Swiss-Prot:P33355" /db_xref="EcoGene:EG12005" /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG" gene complement(2081761..2082480) /gene="yehT" /locus_tag="b2125" /gene_synonym="ECK2117" /gene_synonym="JW5352" /db_xref="EcoGene:EG12006" CDS complement(2081761..2082480) /gene="yehT" /locus_tag="b2125" /gene_synonym="ECK2117" /gene_synonym="JW5352" /codon_start=1 /transl_table=11 /product="putative response regulator in two-component system withYehU" /protein_id="AAC75186.2" /db_xref="GI:87082052" /db_xref="ASAP:ABE-0007023" /db_xref="UniProtKB/Swiss-Prot:P0AFT5" /db_xref="EcoGene:EG12006" /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR NGLTVPVSRRYLKSLKEAIGL" gene complement(2082477..2084162) /gene="yehU" /locus_tag="b2126" /gene_synonym="ECK2118" /gene_synonym="JW5353" /db_xref="EcoGene:EG12007" CDS complement(2082477..2084162) /gene="yehU" /locus_tag="b2126" /gene_synonym="ECK2118" /gene_synonym="JW5353" /function="putative regulator; Not classified" /note="putative 2-component sensor protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="inner membrane putative sensory kinase in two-component system with YehT" /protein_id="AAC75187.1" /db_xref="GI:1788446" /db_xref="ASAP:ABE-0007027" /db_xref="UniProtKB/Swiss-Prot:P0AD14" /db_xref="EcoGene:EG12007" /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA" gene 2084384..2085115 /gene="mlrA" /locus_tag="b2127" /gene_synonym="ECK2119" /gene_synonym="JW2115" /gene_synonym="yehV" /db_xref="EcoGene:EG12008" CDS 2084384..2085115 /gene="mlrA" /locus_tag="b2127" /gene_synonym="ECK2119" /gene_synonym="JW2115" /gene_synonym="yehV" /function="regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of csgD and csgBA" /protein_id="AAC75188.1" /db_xref="GI:1788448" /db_xref="ASAP:ABE-0007030" /db_xref="UniProtKB/Swiss-Prot:P33358" /db_xref="EcoGene:EG12008" /translation="MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFND ADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRT WIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKK QGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGE NRTSAQQQQLTSWQEQGHDIFPLGI" gene 2085175..2085282 /gene="yohO" /locus_tag="b4542" /gene_synonym="ECK2120" /gene_synonym="JW5354" /db_xref="EcoGene:EG14426" CDS 2085175..2085282 /gene="yohO" /locus_tag="b4542" /gene_synonym="ECK2120" /gene_synonym="JW5354" /codon_start=1 /transl_table=11 /product="putative membrane protein" /protein_id="ABD18688.1" /db_xref="GI:87082053" /db_xref="ASAP:ABE-0285063" /db_xref="UniProtKB/Swiss-Prot:Q2EES6" /db_xref="EcoGene:EG14426" /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG" gene complement(2085263..2085994) /gene="yehW" /locus_tag="b2128" /gene_synonym="ECK2121" /gene_synonym="JW2116" /db_xref="EcoGene:EG12009" CDS complement(2085263..2085994) /gene="yehW" /locus_tag="b2128" /gene_synonym="ECK2121" /gene_synonym="JW2116" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC75189.1" /db_xref="GI:1788449" /db_xref="ASAP:ABE-0007032" /db_xref="UniProtKB/Swiss-Prot:P33359" /db_xref="EcoGene:EG12009" /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE SFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRVR KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL LVALAAIIADRLFERLVQALSQHAK" gene complement(2085999..2086925) /gene="yehX" /locus_tag="b2129" /gene_synonym="ECK2122" /gene_synonym="JW2117" /db_xref="EcoGene:EG12010" CDS complement(2085999..2086925) /gene="yehX" /locus_tag="b2129" /gene_synonym="ECK2122" /gene_synonym="JW2117" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATPase" /protein_id="AAC75190.1" /db_xref="GI:1788450" /db_xref="ASAP:ABE-0007034" /db_xref="UniProtKB/Swiss-Prot:P33360" /db_xref="EcoGene:EG12010" /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL KMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERADGEALAEEMTLRDALS LFVARGCEVLPVVNMQGQPCGTLHFQDLLVEA" gene complement(2086918..2088075) /gene="yehY" /locus_tag="b2130" /gene_synonym="ECK2123" /gene_synonym="JW2118" /db_xref="EcoGene:EG12011" CDS complement(2086918..2088075) /gene="yehY" /locus_tag="b2130" /gene_synonym="ECK2123" /gene_synonym="JW2118" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC75191.1" /db_xref="GI:1788451" /db_xref="ASAP:ABE-0007038" /db_xref="UniProtKB/Swiss-Prot:P33361" /db_xref="EcoGene:EG12011" /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV IQTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVV GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND" gene complement(2088082..2088999) /gene="osmF" /locus_tag="b2131" /gene_synonym="ECK2124" /gene_synonym="JW2119" /gene_synonym="yehZ" /db_xref="EcoGene:EG12012" CDS complement(2088082..2088999) /gene="osmF" /locus_tag="b2131" /gene_synonym="ECK2124" /gene_synonym="JW2119" /gene_synonym="yehZ" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative ABC transporter periplasmic binding protein" /protein_id="AAC75192.1" /db_xref="GI:1788452" /db_xref="ASAP:ABE-0007040" /db_xref="UniProtKB/Swiss-Prot:P33362" /db_xref="EcoGene:EG12012" /translation="MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTF KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMA YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLREYPQMAQWLQPVFASLDAKTL QQLNASIAVEGLDAKKVAADYLKQKGWTK" repeat_region 2089143..2089176 /note="REP152 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2089210..2091507) /gene="bglX" /locus_tag="b2132" /gene_synonym="ECK2125" /gene_synonym="glh" /gene_synonym="JW2120" /gene_synonym="yohA" /db_xref="EcoGene:EG12013" CDS complement(2089210..2091507) /gene="bglX" /locus_tag="b2132" /gene_synonym="ECK2125" /gene_synonym="glh" /gene_synonym="JW2120" /gene_synonym="yohA" /EC_number="3.2.1.21" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="beta-D-glucoside glucohydrolase, periplasmic" /protein_id="AAC75193.1" /db_xref="GI:1788453" /db_xref="ASAP:ABE-0007043" /db_xref="UniProtKB/Swiss-Prot:P33363" /db_xref="EcoGene:EG12013" /translation="MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKK MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS GKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAV VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD AEPGKFNVFIGTDSARVKKGEFELL" gene 2091703..2093418 /gene="dld" /locus_tag="b2133" /gene_synonym="ECK2126" /gene_synonym="JW2121" /db_xref="EcoGene:EG10231" CDS 2091703..2093418 /gene="dld" /locus_tag="b2133" /gene_synonym="ECK2126" /gene_synonym="JW2121" /EC_number="1.1.1.28" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="D-lactate dehydrogenase, FAD protein, NADH independent; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="D-lactate dehydrogenase, FAD-binding, NADH independent" /protein_id="AAC75194.1" /db_xref="GI:1788454" /db_xref="ASAP:ABE-0007048" /db_xref="UniProtKB/Swiss-Prot:P06149" /db_xref="EcoGene:EG10231" /translation="MSSMTTTDNKAFLNELARLVGSSHLLTDPAKTARYRKGFRSGQG DALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTL RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD EVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN WQEVE" repeat_region 2093423..2093450 /note="REP153 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2093456..2094388) /gene="pbpG" /locus_tag="b2134" /gene_synonym="ECK2127" /gene_synonym="JW5355" /gene_synonym="psv" /gene_synonym="yohB" /db_xref="EcoGene:EG12015" CDS complement(2093456..2094388) /gene="pbpG" /locus_tag="b2134" /gene_synonym="ECK2127" /gene_synonym="JW5355" /gene_synonym="psv" /gene_synonym="yohB" /function="putative enzyme; Murein sacculus, peptidoglycan" /note="penicillin-binding protein 7; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine endopeptidase" /protein_id="AAC75195.2" /db_xref="GI:87082054" /db_xref="ASAP:ABE-0007050" /db_xref="UniProtKB/Swiss-Prot:P0AFI5" /db_xref="EcoGene:EG12015" /translation="MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAM IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND" gene complement(2094562..2095149) /gene="yohC" /locus_tag="b2135" /gene_synonym="ECK2128" /gene_synonym="JW5356" /db_xref="EcoGene:EG12016" CDS complement(2094562..2095149) /gene="yohC" /locus_tag="b2135" /gene_synonym="ECK2128" /gene_synonym="JW5356" /codon_start=1 /transl_table=11 /product="Yip1 family inner membrane protein" /protein_id="AAC75196.2" /db_xref="GI:87082055" /db_xref="ASAP:ABE-0007053" /db_xref="UniProtKB/Swiss-Prot:P0AD17" /db_xref="EcoGene:EG12016" /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF" gene 2095319..2095897 /gene="yohD" /locus_tag="b2136" /gene_synonym="ECK2129" /gene_synonym="JW2124" /db_xref="EcoGene:EG12017" CDS 2095319..2095897 /gene="yohD" /locus_tag="b2136" /gene_synonym="ECK2129" /gene_synonym="JW2124" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DedA family inner membrane protein" /protein_id="AAC75197.2" /db_xref="GI:87082056" /db_xref="ASAP:ABE-0007059" /db_xref="UniProtKB/Swiss-Prot:P33366" /db_xref="EcoGene:EG12017" /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA" repeat_region 2095903..2095986 /note="REP154 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2096027..2096788) /gene="yohF" /locus_tag="b2137" /gene_synonym="ECK2130" /gene_synonym="JW2125" /gene_synonym="yohE" /db_xref="EcoGene:EG12019" CDS complement(2096027..2096788) /gene="yohF" /locus_tag="b2137" /gene_synonym="ECK2130" /gene_synonym="JW2125" /gene_synonym="yohE" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC75198.1" /db_xref="GI:1788459" /db_xref="ASAP:ABE-0007062" /db_xref="UniProtKB/Swiss-Prot:P33368" /db_xref="EcoGene:EG12019" /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA REVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA SLVVWLCSEGANYTTGQSLIVDGGFMLANPQFNPE" gene complement(2096841..2098276) /gene="mdtQ" /locus_tag="b2139" /gene_synonym="ECK2131" /gene_synonym="JW5838" /gene_synonym="yohG" /gene_synonym="yohH" /pseudo /db_xref="EcoGene:EG12020" CDS complement(join(2096841..2098127,2098127..2098276)) /gene="mdtQ" /locus_tag="b2139" /gene_synonym="ECK2131" /gene_synonym="JW5838" /gene_synonym="yohG" /gene_synonym="yohH" /note="pseudogene; putative channel/filament proteins; GO_component: GO:0009274 - peptidoglycan-based cell wall" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007067" /db_xref="ASAP:ABE-0007071" /db_xref="UniProtKB/Swiss-Prot:P33369" /db_xref="EcoGene:EG12020" gene 2098500..2098583 /gene="yohP" /locus_tag="b4679" /gene_synonym="ECK4494" /db_xref="EcoGene:EG14484" CDS 2098500..2098583 /gene="yohP" /locus_tag="b4679" /gene_synonym="ECK4494" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO60001.1" /db_xref="GI:226510959" /db_xref="UniProtKB/Swiss-Prot:C1P609" /db_xref="EcoGene:EG14484" /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF" gene complement(2098956..2099903) /gene="dusC" /locus_tag="b2140" /gene_synonym="ECK2133" /gene_synonym="JW2128" /gene_synonym="yohI" /db_xref="EcoGene:EG12022" CDS complement(2098956..2099903) /gene="dusC" /locus_tag="b2140" /gene_synonym="ECK2133" /gene_synonym="JW2128" /gene_synonym="yohI" /function="enzyme; tRNA modification" /note="putative regulator protein" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase C" /protein_id="AAC75201.1" /db_xref="GI:1788462" /db_xref="ASAP:ABE-0007074" /db_xref="UniProtKB/Swiss-Prot:P33371" /db_xref="EcoGene:EG12022" /translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKT VNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA GATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGC DAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQW LSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL" gene 2100142..2100540 /gene="yohJ" /locus_tag="b2141" /gene_synonym="ECK2134" /gene_synonym="JW2129" /db_xref="EcoGene:EG12023" CDS 2100142..2100540 /gene="yohJ" /locus_tag="b2141" /gene_synonym="ECK2134" /gene_synonym="JW2129" /codon_start=1 /transl_table=11 /product="UPF0299 family inner membrane protein" /protein_id="AAC75202.1" /db_xref="GI:1788463" /db_xref="ASAP:ABE-0007078" /db_xref="UniProtKB/Swiss-Prot:P60632" /db_xref="EcoGene:EG12023" /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV STLVVFLVVSWSSQLVHGERKVVGQKGSEE" gene 2100537..2101232 /gene="yohK" /locus_tag="b2142" /gene_synonym="ECK2135" /gene_synonym="JW2130" /db_xref="EcoGene:EG12024" CDS 2100537..2101232 /gene="yohK" /locus_tag="b2142" /gene_synonym="ECK2135" /gene_synonym="JW2130" /function="putative transport; Not classified" /note="putative seritonin transporter" /codon_start=1 /transl_table=11 /product="LrgB family inner membrane protein" /protein_id="AAC75203.1" /db_xref="GI:1788464" /db_xref="ASAP:ABE-0007080" /db_xref="UniProtKB/Swiss-Prot:P0AD19" /db_xref="EcoGene:EG12024" /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI APFLFPIILAVMG" gene 2101362..2102246 /gene="cdd" /locus_tag="b2143" /gene_synonym="ECK2136" /gene_synonym="JW2131" /db_xref="EcoGene:EG10137" CDS 2101362..2102246 /gene="cdd" /locus_tag="b2143" /gene_synonym="ECK2136" /gene_synonym="JW2131" /EC_number="3.5.4.5" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 1567863,2692708,8506346,18482579" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="cytidine/deoxycytidine deaminase" /protein_id="AAC75204.1" /db_xref="GI:1788465" /db_xref="ASAP:ABE-0007086" /db_xref="UniProtKB/Swiss-Prot:P0ABF6" /db_xref="EcoGene:EG10137" /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT SATLKALGCHSIDRVLLA" repeat_region 2102254..2102287 /note="REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2102396..2103115 /gene="sanA" /locus_tag="b2144" /gene_synonym="ECK2137" /gene_synonym="JW2132" /gene_synonym="sfiX" /gene_synonym="yeiF" /db_xref="EcoGene:EG12025" CDS 2102396..2103115 /gene="sanA" /locus_tag="b2144" /gene_synonym="ECK2137" /gene_synonym="JW2132" /gene_synonym="sfiX" /gene_synonym="yeiF" /function="transport; Drug/analog sensitivity" /note="vancomycin sensitivity; sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="DUF218 superfamily vancomycin high temperature exclusion protein" /protein_id="AAC75205.1" /db_xref="GI:1788466" /db_xref="ASAP:ABE-0007091" /db_xref="UniProtKB/Swiss-Prot:P0AFY2" /db_xref="EcoGene:EG12025" /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED AQGYPAVTPEQLLELQKKQGK" gene 2103118..2103357 /gene="yeiS" /locus_tag="b2145" /gene_synonym="ECK2138" /gene_synonym="JW5359" /db_xref="EcoGene:EG14073" CDS 2103118..2103357 /gene="yeiS" /locus_tag="b2145" /gene_synonym="ECK2138" /gene_synonym="JW5359" /codon_start=1 /transl_table=11 /product="DUF2542 family protein" /protein_id="AAC75206.1" /db_xref="GI:1788467" /db_xref="ASAP:ABE-0007093" /db_xref="UniProtKB/Swiss-Prot:P64536" /db_xref="EcoGene:EG14073" /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR" gene 2103551..2104789 /gene="preT" /locus_tag="b2146" /gene_synonym="dpdA" /gene_synonym="ECK2139" /gene_synonym="JW2133" /gene_synonym="preB" /gene_synonym="yeiT" /db_xref="EcoGene:EG14074" CDS 2103551..2104789 /gene="preT" /locus_tag="b2146" /gene_synonym="dpdA" /gene_synonym="ECK2139" /gene_synonym="JW2133" /gene_synonym="preB" /gene_synonym="yeiT" /function="enzyme; pyrimidine metabolism" /experiment="N-terminus verified by Edman degradation: PMID 18482579" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="dihydropyrimidine dehydrogenase, NADH-dependent, subunit N" /protein_id="AAC75207.1" /db_xref="GI:1788468" /db_xref="ASAP:ABE-0007096" /db_xref="UniProtKB/Swiss-Prot:P76440" /db_xref="EcoGene:EG14074" /translation="MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDP GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPG GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLG CQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAV KTGKEAAEAIHHYLEGACSC" gene 2104783..2106018 /gene="preA" /locus_tag="b2147" /gene_synonym="ECK2140" /gene_synonym="JW2134" /gene_synonym="yeiA" /db_xref="EcoGene:EG11289" CDS 2104783..2106018 /gene="preA" /locus_tag="b2147" /gene_synonym="ECK2140" /gene_synonym="JW2134" /gene_synonym="yeiA" /function="enzyme; pyrimidine metabolism" /experiment="N-terminus verified by Edman degradation: PMID 18482579" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="dihydropyrimidine dehydrogenase, NADH-dependent, subunit C" /protein_id="AAC75208.2" /db_xref="GI:87082059" /db_xref="ASAP:ABE-0007098" /db_xref="UniProtKB/Swiss-Prot:P25889" /db_xref="EcoGene:EG11289" /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK VLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYC RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMP IVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGA ATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYI VYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGC IELGEVKFKKGEKEHPVTL" repeat_region 2106052..2106201 /note="REP156 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2106261..2107271) /gene="mglC" /locus_tag="b2148" /gene_synonym="ECK2141" /gene_synonym="JW2135" /gene_synonym="mglP" /db_xref="EcoGene:EG10594" CDS complement(2106261..2107271) /gene="mglC" /locus_tag="b2148" /gene_synonym="ECK2141" /gene_synonym="JW2135" /gene_synonym="mglP" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="methyl-galactoside transport and galactose taxis; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="methyl-galactoside transporter subunit" /protein_id="AAC75209.1" /db_xref="GI:1788471" /db_xref="ASAP:ABE-0007101" /db_xref="UniProtKB/Swiss-Prot:P23200" /db_xref="EcoGene:EG10594" /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAR KK" gene complement(2107287..2108807) /gene="mglA" /locus_tag="b2149" /gene_synonym="ECK2142" /gene_synonym="JW2136" /gene_synonym="mglP" /db_xref="EcoGene:EG10592" CDS complement(2107287..2108807) /gene="mglA" /locus_tag="b2149" /gene_synonym="ECK2142" /gene_synonym="JW2136" /gene_synonym="mglP" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="ATP-binding component of methyl-galactoside transport and galactose taxis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="methyl-galactoside ABC transporter ATPase" /protein_id="AAC75210.1" /db_xref="GI:1788472" /db_xref="ASAP:ABE-0007103" /db_xref="UniProtKB/Swiss-Prot:P0AAG8" /db_xref="EcoGene:EG10592" /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDS MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL" gene complement(2108868..2109866) /gene="mglB" /locus_tag="b2150" /gene_synonym="ECK2143" /gene_synonym="JW2137" /db_xref="EcoGene:EG10593" CDS complement(2108868..2109866) /gene="mglB" /locus_tag="b2150" /gene_synonym="ECK2143" /gene_synonym="JW2137" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="galactose-binding transport protein; receptor for galactose taxis; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="methyl-galactoside transporter subunit" /protein_id="AAC75211.1" /db_xref="GI:1788473" /db_xref="ASAP:ABE-0007108" /db_xref="UniProtKB/Swiss-Prot:P0AEE5" /db_xref="EcoGene:EG10593" /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK DGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK" gene complement(2110146..2111186) /gene="galS" /locus_tag="b2151" /gene_synonym="ECK2144" /gene_synonym="JW2138" /gene_synonym="mglD" /db_xref="EcoGene:EG10365" CDS complement(2110146..2111186) /gene="galS" /locus_tag="b2151" /gene_synonym="ECK2144" /gene_synonym="JW2138" /gene_synonym="mglD" /function="regulator; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8982002" /note="mgl repressor, galactose operon inducer; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor" /protein_id="AAC75212.1" /db_xref="GI:1788474" /db_xref="ASAP:ABE-0007110" /db_xref="UniProtKB/Swiss-Prot:P25748" /db_xref="EcoGene:EG10365" /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGAGT PDMPGGEAAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN AAAITNSTNQAM" gene complement(2111328..2112485) /gene="yeiB" /locus_tag="b2152" /gene_synonym="ECK2145" /gene_synonym="JW2139" /db_xref="EcoGene:EG11290" CDS complement(2111328..2112485) /gene="yeiB" /locus_tag="b2152" /gene_synonym="ECK2145" /gene_synonym="JW2139" /codon_start=1 /transl_table=11 /product="DUF418 family putative inner membrane protein" /protein_id="AAC75213.1" /db_xref="GI:1788475" /db_xref="ASAP:ABE-0007115" /db_xref="UniProtKB/Swiss-Prot:P25747" /db_xref="EcoGene:EG11290" /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITP RDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDR LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR" gene complement(2112502..2113170) /gene="folE" /locus_tag="b2153" /gene_synonym="ECK2146" /gene_synonym="JW2140" /db_xref="EcoGene:EG11375" CDS complement(2112502..2113170) /gene="folE" /locus_tag="b2153" /gene_synonym="ECK2146" /gene_synonym="JW2140" /EC_number="3.5.4.16" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="AAC75214.1" /db_xref="GI:1788476" /db_xref="ASAP:ABE-0007117" /db_xref="UniProtKB/Swiss-Prot:P0A6T5" /db_xref="EcoGene:EG11375" /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV RHHN" gene 2113428..2114264 /gene="yeiG" /locus_tag="b2154" /gene_synonym="ECK2147" /gene_synonym="JW2141" /db_xref="EcoGene:EG12026" CDS 2113428..2114264 /gene="yeiG" /locus_tag="b2154" /gene_synonym="ECK2147" /gene_synonym="JW2141" /EC_number="3.1.1.-" /function="enzyme; Formaldehyde degradation" /note="putative esterase" /codon_start=1 /transl_table=11 /product="S-formylglutathione hydrolase" /protein_id="AAC75215.1" /db_xref="GI:1788477" /db_xref="ASAP:ABE-0007124" /db_xref="UniProtKB/Swiss-Prot:P33018" /db_xref="EcoGene:EG12026" /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL LK" gene complement(2114296..2116287) /gene="cirA" /locus_tag="b2155" /gene_synonym="cir" /gene_synonym="ECK2148" /gene_synonym="feuA" /gene_synonym="JW2142" /db_xref="EcoGene:EG10155" CDS complement(2114296..2116287) /gene="cirA" /locus_tag="b2155" /gene_synonym="cir" /gene_synonym="ECK2148" /gene_synonym="feuA" /gene_synonym="JW2142" /function="membrane; Outer membrane constituents" /note="ferric iron outer membrane transporter, TonB-dependent; surface receptor and translocator for colicin I; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter" /protein_id="AAC75216.1" /db_xref="GI:1788478" /db_xref="ASAP:ABE-0007126" /db_xref="UniProtKB/Swiss-Prot:P17315" /db_xref="EcoGene:EG10155" /translation="MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNL KDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL VDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI GQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNS TTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQN YSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLTV GGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPE TSESWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFET GANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGENKPLS DLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVT KDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF" gene complement(2116581..2118050) /gene="lysP" /locus_tag="b2156" /gene_synonym="cadR" /gene_synonym="ECK2149" /gene_synonym="JW2143" /db_xref="EcoGene:EG11337" CDS complement(2116581..2118050) /gene="lysP" /locus_tag="b2156" /gene_synonym="cadR" /gene_synonym="ECK2149" /gene_synonym="JW2143" /function="transport; Transport of small molecules: Amino acids, amines" /note="lysine-specific permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="lysine transporter" /protein_id="AAC75217.1" /db_xref="GI:1788480" /db_xref="ASAP:ABE-0007131" /db_xref="UniProtKB/Swiss-Prot:P25737" /db_xref="EcoGene:EG11337" /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK" gene complement(2118255..2119136) /gene="yeiE" /locus_tag="b2157" /gene_synonym="ECK2150" /gene_synonym="JW2144" /db_xref="EcoGene:EG12105" CDS complement(2118255..2119136) /gene="yeiE" /locus_tag="b2157" /gene_synonym="ECK2150" /gene_synonym="JW2144" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75218.1" /db_xref="GI:1788481" /db_xref="ASAP:ABE-0007138" /db_xref="UniProtKB/Swiss-Prot:P0ACR4" /db_xref="EcoGene:EG12105" /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS NALRRFLDYCDPANVPR" gene 2119235..2120284 /gene="yeiH" /locus_tag="b2158" /gene_synonym="ECK2151" /gene_synonym="JW2145" /db_xref="EcoGene:EG12027" CDS 2119235..2120284 /gene="yeiH" /locus_tag="b2158" /gene_synonym="ECK2151" /gene_synonym="JW2145" /codon_start=1 /transl_table=11 /product="UPF0324 family inner membrane protein" /protein_id="AAC75219.1" /db_xref="GI:1788482" /db_xref="ASAP:ABE-0007142" /db_xref="UniProtKB/Swiss-Prot:P62723" /db_xref="EcoGene:EG12027" /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI VGGGAINYVIQSVIA" gene 2120358..2121215 /gene="nfo" /locus_tag="b2159" /gene_synonym="ECK2152" /gene_synonym="JW2146" /db_xref="EcoGene:EG10651" CDS 2120358..2121215 /gene="nfo" /locus_tag="b2159" /gene_synonym="ECK2152" /gene_synonym="JW2146" /EC_number="3.1.21.2" /function="enzyme; Degradation of DNA" /note="endonuclease IV; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0009314 - response to radiation" /codon_start=1 /transl_table=11 /product="endonuclease IV with intrinsic 3'-5' exonuclease activity" /protein_id="AAC75220.1" /db_xref="GI:1788483" /db_xref="ASAP:ABE-0007146" /db_xref="UniProtKB/Swiss-Prot:P0A6C1" /db_xref="EcoGene:EG10651" /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLN DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK AQQTEKAVA" gene 2121218..2122306 /gene="yeiI" /locus_tag="b2160" /gene_synonym="ECK2153" /gene_synonym="JW2147" /db_xref="EcoGene:EG12028" CDS 2121218..2122306 /gene="yeiI" /locus_tag="b2160" /gene_synonym="ECK2153" /gene_synonym="JW2147" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative kinase" /protein_id="AAC75221.1" /db_xref="GI:1788484" /db_xref="ASAP:ABE-0007149" /db_xref="UniProtKB/Swiss-Prot:P33020" /db_xref="EcoGene:EG12028" /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK GRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHN LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVY LPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVA CAAISRASGSLNNPTLSADNALSLVPMV" repeat_region 2122314..2122404 /note="RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2122413..2123663) /gene="nupX" /locus_tag="b2161" /gene_synonym="ECK2154" /gene_synonym="JW2148" /gene_synonym="yeiJ" /db_xref="EcoGene:EG12029" CDS complement(2122413..2123663) /gene="nupX" /locus_tag="b2161" /gene_synonym="ECK2154" /gene_synonym="JW2148" /gene_synonym="yeiJ" /function="putative transport; Not classified" /note="putative pyrimidine nucleoside transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="nucleoside permease" /protein_id="AAC75222.1" /db_xref="GI:1788485" /db_xref="ASAP:ABE-0007152" /db_xref="UniProtKB/Swiss-Prot:P33021" /db_xref="EcoGene:EG12029" /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG IMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI NGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA YLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGL RALAAATLSNLMSATIAGFFIGLA" gene complement(2123763..2124704) /gene="rihB" /locus_tag="b2162" /gene_synonym="ECK2155" /gene_synonym="JW2149" /gene_synonym="yeiK" /db_xref="EcoGene:EG12030" CDS complement(2123763..2124704) /gene="rihB" /locus_tag="b2162" /gene_synonym="ECK2155" /gene_synonym="JW2149" /gene_synonym="yeiK" /EC_number="3.2.2.-" /codon_start=1 /transl_table=11 /product="ribonucleoside hydrolase 2" /protein_id="AAC75223.1" /db_xref="GI:1788486" /db_xref="ASAP:ABE-0007156" /db_xref="UniProtKB/Swiss-Prot:P33022" /db_xref="EcoGene:EG12030" /translation="MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLD KTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAEST HAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSD IMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD ELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH" gene 2124873..2125532 /gene="yeiL" /locus_tag="b2163" /gene_synonym="ECK2156" /gene_synonym="JW2150" /db_xref="EcoGene:EG12031" CDS 2124873..2125532 /gene="yeiL" /locus_tag="b2163" /gene_synonym="ECK2156" /gene_synonym="JW2150" /function="putative regulator; Not classified" /note="stationary phase nitrogen starvation regulator; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="AAC75224.1" /db_xref="GI:1788487" /db_xref="ASAP:ABE-0007160" /db_xref="UniProtKB/Swiss-Prot:P0A9E9" /db_xref="EcoGene:EG12031" /translation="MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTR GRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYR PLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHT QAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMM Q" repeat_region 2125556..2125592 /note="REP158 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2125603..2126853) /gene="psuT" /locus_tag="b2164" /gene_synonym="ECK2157" /gene_synonym="JW2151" /gene_synonym="pscT" /gene_synonym="yeiM" /db_xref="EcoGene:EG12032" CDS complement(2125603..2126853) /gene="psuT" /locus_tag="b2164" /gene_synonym="ECK2157" /gene_synonym="JW2151" /gene_synonym="pscT" /gene_synonym="yeiM" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative nucleoside transporter" /protein_id="AAC75225.1" /db_xref="GI:1788488" /db_xref="ASAP:ABE-0007163" /db_xref="UniProtKB/Swiss-Prot:P33024" /db_xref="EcoGene:EG12032" /translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA YLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL RALAAATLSNLMSATIAGFFIGLA" gene complement(2126947..2127885) /gene="psuG" /locus_tag="b2165" /gene_synonym="ECK2158" /gene_synonym="JW2152" /gene_synonym="pscG" /gene_synonym="yeiN" /db_xref="EcoGene:EG12033" CDS complement(2126947..2127885) /gene="psuG" /locus_tag="b2165" /gene_synonym="ECK2158" /gene_synonym="JW2152" /gene_synonym="pscG" /gene_synonym="yeiN" /function="enzyme; pseudouridine catabolism" /codon_start=1 /transl_table=11 /product="pseudouridine 5'-phosphate glycosidase" /protein_id="AAC75226.1" /db_xref="GI:1788490" /db_xref="ASAP:ABE-0007165" /db_xref="UniProtKB/Swiss-Prot:P33025" /db_xref="EcoGene:EG12033" /translation="MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQN AQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFV VAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV VCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARA MVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLAR VAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG" gene complement(2127873..2128814) /gene="psuK" /locus_tag="b2166" /gene_synonym="ECK2159" /gene_synonym="JW2153" /gene_synonym="pscK" /gene_synonym="yeiC" /db_xref="EcoGene:EG11646" CDS complement(2127873..2128814) /gene="psuK" /locus_tag="b2166" /gene_synonym="ECK2159" /gene_synonym="JW2153" /gene_synonym="pscK" /gene_synonym="yeiC" /function="enzyme; pseudouridine utilization" /note="putative kinase" /codon_start=1 /transl_table=11 /product="pseudouridine kinase" /protein_id="AAC75227.1" /db_xref="GI:1788491" /db_xref="ASAP:ABE-0007168" /db_xref="UniProtKB/Swiss-Prot:P30235" /db_xref="EcoGene:EG11646" /translation="MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGR NIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLD NTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAANVP VFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLN RLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESV RFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN" gene complement(2129237..2130928) /gene="fruA" /locus_tag="b2167" /gene_synonym="ECK2160" /gene_synonym="JW2154" /gene_synonym="ptsF" /db_xref="EcoGene:EG10336" CDS complement(2129237..2130928) /gene="fruA" /locus_tag="b2167" /gene_synonym="ECK2160" /gene_synonym="JW2154" /gene_synonym="ptsF" /function="regulator; Degradation of small molecules: Carbon compounds" /note="PTS system, fructose-specific transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="fused fructose-specific PTS enzymes: IIBcomponent/IIC components" /protein_id="AAC75228.1" /db_xref="GI:1788492" /db_xref="ASAP:ABE-0007172" /db_xref="UniProtKB/Swiss-Prot:P20966" /db_xref="EcoGene:EG10336" /translation="MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMA IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE SKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA" gene complement(2130945..2131883) /gene="fruK" /locus_tag="b2168" /gene_synonym="ECK2161" /gene_synonym="fpk" /gene_synonym="JW2155" /db_xref="EcoGene:EG10337" CDS complement(2130945..2131883) /gene="fruK" /locus_tag="b2168" /gene_synonym="ECK2161" /gene_synonym="fpk" /gene_synonym="JW2155" /EC_number="2.7.1.56" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_process: GO:0006096 - glycolysis" /codon_start=1 /transl_table=11 /product="fructose-1-phosphate kinase" /protein_id="AAC75229.1" /db_xref="GI:1788493" /db_xref="ASAP:ABE-0007174" /db_xref="UniProtKB/Swiss-Prot:P0AEW9" /db_xref="EcoGene:EG10337" /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN" gene complement(2131883..2133013) /gene="fruB" /locus_tag="b2169" /gene_synonym="ECK2162" /gene_synonym="fpr" /gene_synonym="fruF" /gene_synonym="JW2156" /db_xref="EcoGene:EG10005" CDS complement(2131883..2133013) /gene="fruB" /locus_tag="b2169" /gene_synonym="ECK2162" /gene_synonym="fpr" /gene_synonym="fruF" /gene_synonym="JW2156" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, fructose-specific IIA/fpr component; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="fused fructose-specific PTS enzymes: IIA component/HPr component" /protein_id="AAC75230.1" /db_xref="GI:1788494" /db_xref="ASAP:ABE-0007180" /db_xref="UniProtKB/Swiss-Prot:P69811" /db_xref="EcoGene:EG10005" /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS RAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA" gene 2133381..2134562 /gene="setB" /locus_tag="b2170" /gene_synonym="ECK2163" /gene_synonym="JW2157" /gene_synonym="yeiO" /db_xref="EcoGene:EG12034" CDS 2133381..2134562 /gene="setB" /locus_tag="b2170" /gene_synonym="ECK2163" /gene_synonym="JW2157" /gene_synonym="yeiO" /function="orf; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="lactose/glucose efflux system" /protein_id="AAC75231.1" /db_xref="GI:1788495" /db_xref="ASAP:ABE-0007184" /db_xref="UniProtKB/Swiss-Prot:P33026" /db_xref="EcoGene:EG12034" /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTIEAPRRNRRDT LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA KRLGKRFLMRVAAVGGVCFYAGMLMAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLM PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRIKD V" gene complement(2134559..2134813) /gene="yeiW" /locus_tag="b4502" /gene_synonym="ECK2164" /gene_synonym="JW5361" /db_xref="EcoGene:EG14375" CDS complement(2134559..2134813) /gene="yeiW" /locus_tag="b4502" /gene_synonym="ECK2164" /gene_synonym="JW5361" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="UPF0153 cysteine cluster protein" /protein_id="ABD18689.1" /db_xref="GI:87082060" /db_xref="ASAP:ABE-0285016" /db_xref="UniProtKB/Swiss-Prot:P0AFT8" /db_xref="EcoGene:EG14375" /translation="MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKI FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP" gene 2134968..2135540 /gene="yeiP" /locus_tag="b2171" /gene_synonym="ECK2165" /gene_synonym="JW5362" /db_xref="EcoGene:EG12035" CDS 2134968..2135540 /gene="yeiP" /locus_tag="b2171" /gene_synonym="ECK2165" /gene_synonym="JW5362" /note="putative elongation factor; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="elongation factor P-like protein" /protein_id="AAC75232.2" /db_xref="GI:87082061" /db_xref="ASAP:ABE-0007187" /db_xref="UniProtKB/Swiss-Prot:P0A6N8" /db_xref="EcoGene:EG12035" /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST GLVIQVPEYLSPGEKIRIHIEERRYMGRAD" gene 2135763..2137229 /gene="yeiQ" /locus_tag="b2172" /gene_synonym="ECK2166" /gene_synonym="JW2160" /db_xref="EcoGene:EG12036" CDS 2135763..2137229 /gene="yeiQ" /locus_tag="b2172" /gene_synonym="ECK2166" /gene_synonym="JW2160" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative NAD-dependent D-mannonate oxidoreductase" /protein_id="AAC75233.1" /db_xref="GI:1788497" /db_xref="ASAP:ABE-0007191" /db_xref="UniProtKB/Swiss-Prot:P33029" /db_xref="EcoGene:EG12036" /translation="MNTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV SFPGTMVDRIVPAATDESLVEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDE QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHQGRE TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI" gene 2137347..2138333 /gene="yeiR" /locus_tag="b2173" /gene_synonym="ECK2167" /gene_synonym="JW2161" /db_xref="EcoGene:EG12104" CDS 2137347..2138333 /gene="yeiR" /locus_tag="b2173" /gene_synonym="ECK2167" /gene_synonym="JW2161" /function="enzyme; Not classified" /codon_start=1 /transl_table=11 /product="Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein" /protein_id="AAC75234.1" /db_xref="GI:1788499" /db_xref="ASAP:ABE-0007194" /db_xref="UniProtKB/Swiss-Prot:P33030" /db_xref="EcoGene:EG12104" /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGI DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRTTPE SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA" gene 2138372..2139085 /gene="lpxT" /locus_tag="b2174" /gene_synonym="ECK2168" /gene_synonym="JW2162" /gene_synonym="yeiU" /db_xref="EcoGene:EG14075" CDS 2138372..2139085 /gene="lpxT" /locus_tag="b2174" /gene_synonym="ECK2168" /gene_synonym="JW2162" /gene_synonym="yeiU" /codon_start=1 /transl_table=11 /product="lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase" /protein_id="AAC75235.2" /db_xref="GI:87082062" /db_xref="ASAP:ABE-0007196" /db_xref="UniProtKB/Swiss-Prot:P76445" /db_xref="EcoGene:EG14075" /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQ KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA VVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR LITFFDKSLPGKNKHFQNK" gene 2139497..2140063 /gene="mepS" /locus_tag="b2175" /gene_synonym="ECK2169" /gene_synonym="JW2163" /gene_synonym="spr" /gene_synonym="yeiV" /db_xref="EcoGene:EG14076" CDS 2139497..2140063 /gene="mepS" /locus_tag="b2175" /gene_synonym="ECK2169" /gene_synonym="JW2163" /gene_synonym="spr" /gene_synonym="yeiV" /function="enzyme; Murein sacculus, peptidoglycan" /note="putative lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase" /protein_id="AAC75236.1" /db_xref="GI:1788501" /db_xref="ASAP:ABE-0007200" /db_xref="UniProtKB/Swiss-Prot:P0AFV4" /db_xref="EcoGene:EG14076" /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST SSGVIISSMNEPYWKKRYNEARRVLSRS" gene 2140244..2141800 /gene="rtn" /locus_tag="b2176" /gene_synonym="ECK2170" /gene_synonym="JW2164" /db_xref="EcoGene:EG14077" CDS 2140244..2141800 /gene="rtn" /locus_tag="b2176" /gene_synonym="ECK2170" /gene_synonym="JW2164" /codon_start=1 /transl_table=11 /product="resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase" /protein_id="AAC75237.1" /db_xref="GI:1788502" /db_xref="ASAP:ABE-0007203" /db_xref="UniProtKB/Swiss-Prot:P76446" /db_xref="EcoGene:EG14077" /translation="MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD TLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVR WLKKPYTPQW" gene 2141882..2143696 /gene="yejA" /locus_tag="b2177" /gene_synonym="ECK2171" /gene_synonym="JW2165" /db_xref="EcoGene:EG12037" CDS 2141882..2143696 /gene="yejA" /locus_tag="b2177" /gene_synonym="ECK2171" /gene_synonym="JW2165" /note="periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="microcin C ABC transporter periplasmic binding protein" /protein_id="AAC75238.2" /db_xref="GI:87082063" /db_xref="ASAP:ABE-0007206" /db_xref="UniProtKB/Swiss-Prot:P33913" /db_xref="EcoGene:EG12037" /translation="MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFD YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPV SKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQ HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINST YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW WDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE" gene 2143697..2144791 /gene="yejB" /locus_tag="b2178" /gene_synonym="ECK2172" /gene_synonym="JW2166" /db_xref="EcoGene:EG12038" CDS 2143697..2144791 /gene="yejB" /locus_tag="b2178" /gene_synonym="ECK2172" /gene_synonym="JW2166" /function="putative transport; Not classified" /note="putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="microcin C ABC transporter permease" /protein_id="AAC75239.1" /db_xref="GI:1788504" /db_xref="ASAP:ABE-0007208" /db_xref="UniProtKB/Swiss-Prot:P0AFU0" /db_xref="EcoGene:EG12038" /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV YNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY QKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWK HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL YIFTLIGLLLNIVSDISYTLVDPRIDFEGR" gene 2144791..2145816 /gene="yejE" /locus_tag="b2179" /gene_synonym="ECK2173" /gene_synonym="JW2167" /db_xref="EcoGene:EG12040" CDS 2144791..2145816 /gene="yejE" /locus_tag="b2179" /gene_synonym="ECK2173" /gene_synonym="JW2167" /function="putative transport; Not classified" /note="putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="microcin C ABC transporter permease" /protein_id="AAC75240.1" /db_xref="GI:1788505" /db_xref="ASAP:ABE-0007210" /db_xref="UniProtKB/Swiss-Prot:P33915" /db_xref="EcoGene:EG12040" /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA TSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA FDPNKAV" gene 2145818..2147407 /gene="yejF" /locus_tag="b2180" /gene_synonym="ECK2174" /gene_synonym="JW2168" /db_xref="EcoGene:EG12041" CDS 2145818..2147407 /gene="yejF" /locus_tag="b2180" /gene_synonym="ECK2174" /gene_synonym="JW2168" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="microcin C ABC transporter ATPase" /protein_id="AAC75241.1" /db_xref="GI:1788506" /db_xref="ASAP:ABE-0007212" /db_xref="UniProtKB/Swiss-Prot:P33916" /db_xref="EcoGene:EG12041" /translation="MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES GSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPM VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD EPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIILRQGEVVEQG PCARVFATPQQEYTRQLLALS" gene complement(2147411..2147755) /gene="yejG" /locus_tag="b2181" /gene_synonym="ECK2175" /gene_synonym="JW2169" /db_xref="EcoGene:EG12042" CDS complement(2147411..2147755) /gene="yejG" /locus_tag="b2181" /gene_synonym="ECK2175" /gene_synonym="JW2169" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75242.1" /db_xref="GI:1788507" /db_xref="ASAP:ABE-0007214" /db_xref="UniProtKB/Swiss-Prot:P0AD21" /db_xref="EcoGene:EG12042" /translation="MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVAL KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV AIAEPFSNYNPF" gene complement(2148088..2149278) /gene="bcr" /locus_tag="b2182" /gene_synonym="bicA" /gene_synonym="bicR" /gene_synonym="ECK2176" /gene_synonym="JW5363" /gene_synonym="sur" /gene_synonym="suxA" /db_xref="EcoGene:EG11419" CDS complement(2148088..2149278) /gene="bcr" /locus_tag="b2182" /gene_synonym="bicA" /gene_synonym="bicR" /gene_synonym="ECK2176" /gene_synonym="JW5363" /gene_synonym="sur" /gene_synonym="suxA" /function="transport; Drug/analog sensitivity" /note="bicyclomycin resistance protein; transmembrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="bicyclomycin/cysteine/sulfonamide efflux transporter" /protein_id="AAC75243.1" /db_xref="GI:1788509" /db_xref="ASAP:ABE-0007221" /db_xref="UniProtKB/Swiss-Prot:P28246" /db_xref="EcoGene:EG11419" /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPA GSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLI VMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVW LSWHYIFWILALAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSY MLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRI GALNMFRSGLWIQFIMAAWMVISALLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDE FPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFCLYASR PKKR" gene complement(2149306..2150001) /gene="rsuA" /locus_tag="b2183" /gene_synonym="ECK2177" /gene_synonym="JW2171" /gene_synonym="yejD" /db_xref="EcoGene:EG12044" CDS complement(2149306..2150001) /gene="rsuA" /locus_tag="b2183" /gene_synonym="ECK2177" /gene_synonym="JW2171" /gene_synonym="yejD" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 7612632" /note="16S pseudouridylate 516 synthase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA pseudouridine(516) synthase" /protein_id="AAC75244.1" /db_xref="GI:1788510" /db_xref="ASAP:ABE-0007223" /db_xref="UniProtKB/Swiss-Prot:P0AA43" /db_xref="EcoGene:EG12044" /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE YRPLTEEEIASVV" gene 2150150..2151910 /gene="yejH" /locus_tag="b2184" /gene_synonym="ECK2178" /gene_synonym="JW2172" /gene_synonym="yejI" /gene_synonym="yejJ" /db_xref="EcoGene:EG12045" CDS 2150150..2151910 /gene="yejH" /locus_tag="b2184" /gene_synonym="ECK2178" /gene_synonym="JW2172" /gene_synonym="yejI" /gene_synonym="yejJ" /function="putative enzyme; Not classified" /note="putative ATP-dependent helicase" /codon_start=1 /transl_table=11 /product="putative ATP-dependent DNA or RNA helicase" /protein_id="AAC75245.1" /db_xref="GI:1788511" /db_xref="ASAP:ABE-0007228" /db_xref="UniProtKB/Swiss-Prot:P33919" /db_xref="EcoGene:EG12045" /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS NGLFSEADLNRELKKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAED AALITGDTPGAERDVLIENFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ VREKVFDYEGRFRLAHELRG" gene 2152035..2152319 /gene="rplY" /locus_tag="b2185" /gene_synonym="ECK2179" /gene_synonym="JW2173" /db_xref="EcoGene:EG10885" CDS 2152035..2152319 /gene="rplY" /locus_tag="b2185" /gene_synonym="ECK2179" /gene_synonym="JW2173" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 1093874,1100506,9298646,9868784" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L25" /protein_id="AAC75246.1" /db_xref="GI:1788512" /db_xref="ASAP:ABE-0007231" /db_xref="UniProtKB/Swiss-Prot:P68919" /db_xref="EcoGene:EG10885" /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH DKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA" repeat_region 2152405..2152438 /note="REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2152458..2153465) /gene="yejK" /locus_tag="b2186" /gene_synonym="ECK2180" /gene_synonym="JW2174" /gene_synonym="ndpA" /db_xref="EcoGene:EG12048" CDS complement(2152458..2153465) /gene="yejK" /locus_tag="b2186" /gene_synonym="ECK2180" /gene_synonym="JW2174" /gene_synonym="ndpA" /note="protein present in spermidine nucleoids; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="spermidine nucleoid-associated protein" /protein_id="AAC75247.1" /db_xref="GI:1788513" /db_xref="ASAP:ABE-0007234" /db_xref="UniProtKB/Swiss-Prot:P33920" /db_xref="EcoGene:EG12048" /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE RQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADR STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG N" gene 2153647..2153874 /gene="yejL" /locus_tag="b2187" /gene_synonym="ECK2181" /gene_synonym="JW2175" /db_xref="EcoGene:EG12043" CDS 2153647..2153874 /gene="yejL" /locus_tag="b2187" /gene_synonym="ECK2181" /gene_synonym="JW2175" /codon_start=1 /transl_table=11 /product="UPF0352 family protein" /protein_id="AAC75248.1" /db_xref="GI:1788514" /db_xref="ASAP:ABE-0007238" /db_xref="UniProtKB/Swiss-Prot:P0AD24" /db_xref="EcoGene:EG12043" /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL INTSIAPAQRQAIANSFARALQSSINEDKAH" gene 2153894..2155654 /gene="yejM" /locus_tag="b2188" /gene_synonym="ECK2182" /gene_synonym="JW2176" /gene_synonym="yejN" /db_xref="EcoGene:EG12049" CDS 2153894..2155654 /gene="yejM" /locus_tag="b2188" /gene_synonym="ECK2182" /gene_synonym="JW2176" /gene_synonym="yejN" /function="putative enzyme; Not classified" /note="putative sulfatase" /codon_start=1 /transl_table=11 /product="essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor" /protein_id="AAC75249.1" /db_xref="GI:1788515" /db_xref="ASAP:ABE-0007240" /db_xref="UniProtKB/Swiss-Prot:P0AD27" /db_xref="EcoGene:EG12049" /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNR WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAG RGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE KPQLSLLLQVLTDEKRFIAN" gene 2155729..2155805 /gene="proL" /locus_tag="b2189" /gene_synonym="ECK2183" /gene_synonym="JWR0042" /gene_synonym="proW" /db_xref="EcoGene:EG30067" tRNA 2155729..2155805 /gene="proL" /locus_tag="b2189" /gene_synonym="ECK2183" /gene_synonym="JWR0042" /gene_synonym="proW" /product="tRNA-Pro" /note="anticodon: GGG" /db_xref="ASAP:ABE-0007242" /db_xref="EcoGene:EG30067" gene complement(join(2155908..2158432,2159632..2159698)) /gene="yejO" /locus_tag="b2190" /gene_synonym="ECK2184" /gene_synonym="JW5839" /pseudo /db_xref="EcoGene:EG12051" CDS complement(join(2155908..2158432,2159632..2159698)) /gene="yejO" /locus_tag="b2190" /gene_synonym="ECK2184" /gene_synonym="JW5839" /note="pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP-binding component of a transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007244" /db_xref="UniProtKB/Swiss-Prot:P33924" /db_xref="EcoGene:EG12051" mobile_element complement(2158437..2159631) /mobile_element_type="insertion sequence:IS5K" gene complement(2158583..2159599) /gene="insH1" /locus_tag="b2192" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(2158583..2159599) /gene="insH1" /locus_tag="b2192" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC75252.1" /db_xref="GI:1788518" /db_xref="ASAP:ABE-0007252" /db_xref="UniProtKB/Swiss-Prot:P0CE55" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 2160018..2160665 /gene="narP" /locus_tag="b2193" /gene_synonym="ECK2185" /gene_synonym="JW2181" /db_xref="EcoGene:EG11527" CDS 2160018..2160665 /gene="narP" /locus_tag="b2193" /gene_synonym="ECK2185" /gene_synonym="JW2181" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="nitrate/nitrite response regulator (sensor NarQ); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with NarQ" /protein_id="AAC75253.1" /db_xref="GI:1788521" /db_xref="ASAP:ABE-0007259" /db_xref="UniProtKB/Swiss-Prot:P31802" /db_xref="EcoGene:EG11527" /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASA IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ" repeat_region 2160671..2160869 /note="RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site" gene complement(2160876..2161928) /gene="ccmH" /locus_tag="b2194" /gene_synonym="ECK2186" /gene_synonym="JW2182" /gene_synonym="yejP" /db_xref="EcoGene:EG12052" CDS complement(2160876..2161928) /gene="ccmH" /locus_tag="b2194" /gene_synonym="ECK2186" /gene_synonym="JW2182" /gene_synonym="yejP" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="possible subunit of heme lyase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heme lyase, CcmH subunit" /protein_id="AAC75254.1" /db_xref="GI:1788522" /db_xref="ASAP:ABE-0007262" /db_xref="UniProtKB/Swiss-Prot:P0ABM9" /db_xref="EcoGene:EG12052" /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV LLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIV AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIE RSIAQAMQHLSPQESK" gene complement(2161925..2162482) /gene="dsbE" /locus_tag="b2195" /gene_synonym="ccmG" /gene_synonym="ECK2187" /gene_synonym="JW2183" /gene_synonym="yejQ" /db_xref="EcoGene:EG12053" CDS complement(2161925..2162482) /gene="dsbE" /locus_tag="b2195" /gene_synonym="ccmG" /gene_synonym="ECK2187" /gene_synonym="JW2183" /gene_synonym="yejQ" /function="enzyme; Energy metabolism, carbon: Electron transport" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="periplasmic thioredoxin of cytochrome c-type biogenesis" /protein_id="AAC75255.1" /db_xref="GI:1788523" /db_xref="ASAP:ABE-0007264" /db_xref="UniProtKB/Swiss-Prot:P0AA86" /db_xref="EcoGene:EG12053" /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA GDLNPRVWEEEIKPLWEKYSKEAAQ" gene complement(2162479..2164422) /gene="ccmF" /locus_tag="b2196" /gene_synonym="ECK2188" /gene_synonym="JW2184" /gene_synonym="yejR" /db_xref="EcoGene:EG12054" CDS complement(2162479..2164422) /gene="ccmF" /locus_tag="b2196" /gene_synonym="ECK2188" /gene_synonym="JW2184" /gene_synonym="yejR" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="cytochrome c-type biogenesis protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="heme lyase, CcmF subunit" /protein_id="AAC75256.1" /db_xref="GI:1788524" /db_xref="ASAP:ABE-0007269" /db_xref="UniProtKB/Swiss-Prot:P33927" /db_xref="EcoGene:EG12054" /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRY YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG LLCLFDPRYRKRVSPQKTAPEAV" gene complement(2164419..2164898) /gene="ccmE" /locus_tag="b2197" /gene_synonym="ECK2189" /gene_synonym="JW2185" /gene_synonym="yejS" /db_xref="EcoGene:EG12055" CDS complement(2164419..2164898) /gene="ccmE" /locus_tag="b2197" /gene_synonym="ECK2189" /gene_synonym="JW2185" /gene_synonym="yejS" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /experiment="N-terminus verified by Edman degradation: PMID 9770295" /note="cytochrome c biogenesis, possible subunit of a heme lyase; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="periplasmic heme chaperone" /protein_id="AAC75257.1" /db_xref="GI:1788525" /db_xref="ASAP:ABE-0007271" /db_xref="UniProtKB/Swiss-Prot:P69490" /db_xref="EcoGene:EG12055" /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS" gene complement(2164895..2165104) /gene="ccmD" /locus_tag="b2198" /gene_synonym="ECK2190" /gene_synonym="JW2186" /gene_synonym="yojM" /db_xref="EcoGene:EG12169" CDS complement(2164895..2165104) /gene="ccmD" /locus_tag="b2198" /gene_synonym="ECK2190" /gene_synonym="JW2186" /gene_synonym="yojM" /function="transport; Protein, peptide secretion" /note="heme exporter protein C; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis protein; heme export ABC transporter holo-CcmE release factor" /protein_id="AAC75258.1" /db_xref="GI:1788526" /db_xref="ASAP:ABE-0007273" /db_xref="UniProtKB/Swiss-Prot:P0ABM5" /db_xref="EcoGene:EG12169" /translation="MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR AILRGVAQQRAREARLRAAQQQEAA" gene complement(2165101..2165838) /gene="ccmC" /locus_tag="b2199" /gene_synonym="ECK2191" /gene_synonym="JW2187" /gene_synonym="yejT" /gene_synonym="yejU" /db_xref="EcoGene:EG12057" CDS complement(2165101..2165838) /gene="ccmC" /locus_tag="b2199" /gene_synonym="ECK2191" /gene_synonym="JW2187" /gene_synonym="yejT" /gene_synonym="yejU" /function="transport; Protein, peptide secretion" /note="heme exporter protein C; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heme export ABC transporter permease; CcmE-interacting protein" /protein_id="AAC75259.1" /db_xref="GI:1788527" /db_xref="ASAP:ABE-0007275" /db_xref="UniProtKB/Swiss-Prot:P0ABM1" /db_xref="EcoGene:EG12057" /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL MRMRNLILLMEKRRPWVSELILKRGRK" gene complement(2165880..2166542) /gene="ccmB" /locus_tag="b2200" /gene_synonym="ECK2192" /gene_synonym="JW2188" /gene_synonym="yejV" /db_xref="EcoGene:EG12058" CDS complement(2165880..2166542) /gene="ccmB" /locus_tag="b2200" /gene_synonym="ECK2192" /gene_synonym="JW2188" /gene_synonym="yejV" /function="transport; Protein, peptide secretion" /note="heme exporter protein B, cytochrome c-type biogenesis protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heme export ABC transporter permease" /protein_id="AAC75260.1" /db_xref="GI:1788528" /db_xref="ASAP:ABE-0007277" /db_xref="UniProtKB/Swiss-Prot:P0ABL8" /db_xref="EcoGene:EG12058" /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS IQ" gene complement(2166539..2167162) /gene="ccmA" /locus_tag="b2201" /gene_synonym="ECK2193" /gene_synonym="JW5366" /gene_synonym="yejW" /db_xref="EcoGene:EG12059" CDS complement(2166539..2167162) /gene="ccmA" /locus_tag="b2201" /gene_synonym="ECK2193" /gene_synonym="JW5366" /gene_synonym="yejW" /function="transport; Protein, peptide secretion" /note="ATP binding protein of heme exporter A; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0017004 - cytochrome complex assembly; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heme export ABC transporter ATPase" /protein_id="AAC75261.2" /db_xref="GI:87082064" /db_xref="ASAP:ABE-0007279" /db_xref="UniProtKB/Swiss-Prot:P33931" /db_xref="EcoGene:EG12059" /translation="MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTT LLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHR DGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAID VNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA" gene complement(2167175..2167777) /gene="napC" /locus_tag="b2202" /gene_synonym="ECK2194" /gene_synonym="JW2190" /gene_synonym="yejX" /db_xref="EcoGene:EG12060" CDS complement(2167175..2167777) /gene="napC" /locus_tag="b2202" /gene_synonym="ECK2194" /gene_synonym="JW2190" /gene_synonym="yejX" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="cytochrome c-type protein; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="quinol dehydrogenase, electron source for NapAB" /protein_id="AAC75262.1" /db_xref="GI:1788530" /db_xref="ASAP:ABE-0007281" /db_xref="UniProtKB/Swiss-Prot:P0ABL5" /db_xref="EcoGene:EG12060" /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF" gene complement(2167787..2168236) /gene="napB" /locus_tag="b2203" /gene_synonym="ECK2195" /gene_synonym="JW5367" /gene_synonym="yejY" /db_xref="EcoGene:EG12061" CDS complement(2167787..2168236) /gene="napB" /locus_tag="b2203" /gene_synonym="ECK2195" /gene_synonym="JW5367" /gene_synonym="yejY" /function="carrier; Energy metabolism, carbon: Electron transport" /note="cytochrome c-type protein; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="nitrate reductase, small, cytochrome C550 subunit, periplasmic" /protein_id="AAC75263.2" /db_xref="GI:87082065" /db_xref="ASAP:ABE-0007283" /db_xref="UniProtKB/Swiss-Prot:P0ABL3" /db_xref="EcoGene:EG12061" /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE GAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK" gene complement(2168233..2169096) /gene="napH" /locus_tag="b2204" /gene_synonym="ECK2196" /gene_synonym="JW2192" /gene_synonym="yejZ" /db_xref="EcoGene:EG12062" CDS complement(2168233..2169096) /gene="napH" /locus_tag="b2204" /gene_synonym="ECK2196" /gene_synonym="JW2192" /gene_synonym="yejZ" /function="carrier; Energy metabolism, carbon: Electron transport" /note="ferredoxin-type protein: electron transfer; GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="ferredoxin-type protein" /protein_id="AAC75264.1" /db_xref="GI:1788532" /db_xref="ASAP:ABE-0007285" /db_xref="UniProtKB/Swiss-Prot:P33934" /db_xref="EcoGene:EG12062" /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWI NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV AATDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT ITTRWSSGAKS" gene complement(2169083..2169778) /gene="napG" /locus_tag="b2205" /gene_synonym="ECK2197" /gene_synonym="JW2193" /gene_synonym="yojA" /gene_synonym="yojB" /db_xref="EcoGene:EG12064" CDS complement(2169083..2169778) /gene="napG" /locus_tag="b2205" /gene_synonym="ECK2197" /gene_synonym="JW2193" /gene_synonym="yojA" /gene_synonym="yojB" /function="carrier; Energy metabolism, carbon: Electron transport" /note="ferredoxin-type protein: electron transfer; GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="ferredoxin-type protein" /protein_id="AAC75265.1" /db_xref="GI:1788533" /db_xref="ASAP:ABE-0007287" /db_xref="UniProtKB/Swiss-Prot:P0AAL3" /db_xref="EcoGene:EG12064" /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH YRFGWLEGNNGKS" gene complement(2169785..2172271) /gene="napA" /locus_tag="b2206" /gene_synonym="ECK2198" /gene_synonym="JW2194" /gene_synonym="yojC" /gene_synonym="yojD" /gene_synonym="yojE" /db_xref="EcoGene:EG12067" CDS complement(2169785..2172271) /gene="napA" /locus_tag="b2206" /gene_synonym="ECK2198" /gene_synonym="JW2194" /gene_synonym="yojC" /gene_synonym="yojD" /gene_synonym="yojE" /EC_number="1.7.99.4" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="probable nitrate reductase 3; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrate reductase, periplasmic, large subunit" /protein_id="AAC75266.1" /db_xref="GI:1788534" /db_xref="ASAP:ABE-0007289" /db_xref="UniProtKB/Swiss-Prot:P33937" /db_xref="EcoGene:EG12067" /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL RMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA QLVNKLTLDATDPLSKETDFKKCAVKLEKV" gene complement(2172268..2172531) /gene="napD" /locus_tag="b2207" /gene_synonym="ECK2199" /gene_synonym="JW2195" /gene_synonym="yojF" /db_xref="EcoGene:EG12143" CDS complement(2172268..2172531) /gene="napD" /locus_tag="b2207" /gene_synonym="ECK2199" /gene_synonym="JW2195" /gene_synonym="yojF" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="assembly protein for periplasmic nitrate reductase" /protein_id="AAC75267.1" /db_xref="GI:1788535" /db_xref="ASAP:ABE-0007291" /db_xref="UniProtKB/Swiss-Prot:P0A9I5" /db_xref="EcoGene:EG12143" /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP" gene complement(2172521..2173015) /gene="napF" /locus_tag="b2208" /gene_synonym="ECK2200" /gene_synonym="JW2196" /gene_synonym="yojG" /db_xref="EcoGene:EG12068" CDS complement(2172521..2173015) /gene="napF" /locus_tag="b2208" /gene_synonym="ECK2200" /gene_synonym="JW2196" /gene_synonym="yojG" /function="carrier; Energy metabolism, carbon: Electron transport" /note="ferredoxin-type protein: electron transfer; GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA" /protein_id="AAC75268.1" /db_xref="GI:1788536" /db_xref="ASAP:ABE-0007293" /db_xref="UniProtKB/Swiss-Prot:P0AAL0" /db_xref="EcoGene:EG12068" /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY LHAH" gene 2173423..2173911 /gene="eco" /locus_tag="b2209" /gene_synonym="ECK2201" /gene_synonym="eti" /gene_synonym="JW2197" /db_xref="EcoGene:EG10255" CDS 2173423..2173911 /gene="eco" /locus_tag="b2209" /gene_synonym="ECK2201" /gene_synonym="eti" /gene_synonym="JW2197" /function="regulator; Degradation of proteins, peptides, glyco" /note="GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="ecotin, a serine protease inhibitor" /protein_id="AAC75269.1" /db_xref="GI:1788538" /db_xref="ASAP:ABE-0007297" /db_xref="UniProtKB/Swiss-Prot:P23827" /db_xref="EcoGene:EG10255" /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVS TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAV VR" repeat_region 2173935..2174589 /note="REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences" gene complement(2174626..2176272) /gene="mqo" /locus_tag="b2210" /gene_synonym="ECK2202" /gene_synonym="JW2198" /gene_synonym="yojH" /db_xref="EcoGene:EG12069" CDS complement(2174626..2176272) /gene="mqo" /locus_tag="b2210" /gene_synonym="ECK2202" /gene_synonym="JW2198" /gene_synonym="yojH" /EC_number="1.1.5.4" /note="GO_process: GO:0006099 - tricarboxylic acid cycle" /codon_start=1 /transl_table=11 /product="malate dehydrogenase, FAD/NAD(P)-binding domain" /protein_id="AAC75270.1" /db_xref="GI:1788539" /db_xref="ASAP:ABE-0007300" /db_xref="UniProtKB/Swiss-Prot:P33940" /db_xref="EcoGene:EG12069" /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA TLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIA ALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE LQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL" gene complement(2176490..2178133) /gene="yojI" /locus_tag="b2211" /gene_synonym="ECK2203" /gene_synonym="JW2199" /gene_synonym="yojJ" /db_xref="EcoGene:EG12070" CDS complement(2176490..2178133) /gene="yojI" /locus_tag="b2211" /gene_synonym="ECK2203" /gene_synonym="JW2199" /gene_synonym="yojJ" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="microcin J25 efflux ABC transporter permease/ATPase" /protein_id="AAC75271.1" /db_xref="GI:1788540" /db_xref="ASAP:ABE-0007303" /db_xref="UniProtKB/Swiss-Prot:P33941" /db_xref="EcoGene:EG12070" /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETA DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR TPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFAYQD NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA" gene complement(2178209..2178859) /gene="alkB" /locus_tag="b2212" /gene_synonym="aidD" /gene_synonym="ECK2204" /gene_synonym="JW2200" /db_xref="EcoGene:EG10037" CDS complement(2178209..2178859) /gene="alkB" /locus_tag="b2212" /gene_synonym="aidD" /gene_synonym="ECK2204" /gene_synonym="JW2200" /function="putative enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 3536913" /note="DNA repair system specific for alkylated DNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions" /protein_id="AAC75272.1" /db_xref="GI:1788541" /db_xref="ASAP:ABE-0007308" /db_xref="UniProtKB/Swiss-Prot:P05050" /db_xref="EcoGene:EG10037" /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS PFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQR AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE" gene complement(2178859..2179923) /gene="ada" /locus_tag="b2213" /gene_synonym="ECK2205" /gene_synonym="JW2201" /db_xref="EcoGene:EG10029" CDS complement(2178859..2179923) /gene="ada" /locus_tag="b2213" /gene_synonym="ECK2205" /gene_synonym="JW2201" /EC_number="2.1.1.63" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2987251" /note="O6-methylguanine-DNA methyltransferase; transcription activator/repressor; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase" /protein_id="AAC75273.1" /db_xref="GI:1788542" /db_xref="ASAP:ABE-0007311" /db_xref="UniProtKB/Swiss-Prot:P06134" /db_xref="EcoGene:EG10029" /translation="MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA RHALRENVSFYANASEALAAGFRPCKRCQPEKANAQQHRLDKITHACRLLEQETPVTL EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCELGRCLVAESERGICAILLGDD DATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW QALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIIIPCHRVVRGDGTLSGY RWGVSRKAQLLRREAENEER" gene complement(2179997..2181052) /gene="apbE" /locus_tag="b2214" /gene_synonym="ECK2206" /gene_synonym="JW5368" /gene_synonym="yojK" /gene_synonym="yojL" /db_xref="EcoGene:EG12073" CDS complement(2179997..2181052) /gene="apbE" /locus_tag="b2214" /gene_synonym="ECK2206" /gene_synonym="JW5368" /gene_synonym="yojK" /gene_synonym="yojL" /note="GO_process: GO:0009228 - thiamin biosynthetic process" /codon_start=1 /transl_table=11 /product="putative thiamine-synthetic flavin transferase lipoprotein" /protein_id="AAC75274.1" /db_xref="GI:1788543" /db_xref="ASAP:ABE-0007317" /db_xref="UniProtKB/Swiss-Prot:P0AB85" /db_xref="EcoGene:EG12073" /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA MADIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQH LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR GMNGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF KTWMSPQFKSFLVSEKN" gene complement(2181164..2182267) /gene="ompC" /locus_tag="b2215" /gene_synonym="butR" /gene_synonym="ECK2207" /gene_synonym="JW2203" /gene_synonym="meoA" /gene_synonym="par" /db_xref="EcoGene:EG10670" CDS complement(2181164..2182267) /gene="ompC" /locus_tag="b2215" /gene_synonym="butR" /gene_synonym="ECK2207" /gene_synonym="JW2203" /gene_synonym="meoA" /gene_synonym="par" /function="membrane; Outer membrane constituents" /note="outer membrane protein 1b (Ib;c); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane porin protein C" /protein_id="AAC75275.1" /db_xref="GI:1788544" /db_xref="ASAP:ABE-0007321" /db_xref="UniProtKB/Swiss-Prot:P06996" /db_xref="EcoGene:EG10670" /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF SDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLK FQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGL VDGLNFAVQYQGKNGNPSGEGFTSGVTNNGRDALRQNGDGVGGSITYDYEGFGIGGAI SSSKRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANK AQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTY VDYKINLLDDNQFTRDAGINTDNIVALGLVYQF" gene 2182602..2182694 /gene="micF" /locus_tag="b4439" /gene_synonym="ECK2208" /gene_synonym="IS113" /gene_synonym="JWR0043" /gene_synonym="stc" /db_xref="EcoGene:EG30063" ncRNA 2182602..2182694 /ncRNA_class="antisense_RNA" /gene="micF" /locus_tag="b4439" /gene_synonym="ECK2208" /gene_synonym="IS113" /gene_synonym="JWR0043" /gene_synonym="stc" /product="sRNA antisense regulator affecting ompF expression, Hfq-dependent" /note="regulatory antisense RNA affecting ompF expression; member of soxRS regulon" /db_xref="ASAP:ABE-0047259" /db_xref="EcoGene:EG30063" gene 2183006..2185678 /gene="rcsD" /locus_tag="b2216" /gene_synonym="ECK2209" /gene_synonym="JW2204" /gene_synonym="yojN" /gene_synonym="yojP" /gene_synonym="yojQ" /db_xref="EcoGene:EG12385" CDS 2183006..2185678 /gene="rcsD" /locus_tag="b2216" /gene_synonym="ECK2209" /gene_synonym="JW2204" /gene_synonym="yojN" /gene_synonym="yojP" /gene_synonym="yojQ" /function="putative regulator; Not classified" /note="putative 2-component sensor protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="phosphotransfer intermediate protein in two-component regulatory system with RcsBC" /protein_id="AAC75276.1" /db_xref="GI:1788545" /db_xref="ASAP:ABE-0007330" /db_xref="UniProtKB/Swiss-Prot:P39838" /db_xref="EcoGene:EG12385" /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA WLKDKSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST LPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNS TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS SRSTENVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ AQRLYEKNQQGRMIFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH FPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL" gene 2185695..2186345 /gene="rcsB" /locus_tag="b2217" /gene_synonym="ECK2210" /gene_synonym="JW2205" /gene_synonym="viaA" /db_xref="EcoGene:EG10821" CDS 2185695..2186345 /gene="rcsB" /locus_tag="b2217" /gene_synonym="ECK2210" /gene_synonym="JW2205" /gene_synonym="viaA" /function="regulator; Surface polysaccharides & antigens" /note="positive response regulator for colanic capsule biosynthesis, (sensor, RcsC); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with RcsC and YojN" /protein_id="AAC75277.1" /db_xref="GI:1788546" /db_xref="ASAP:ABE-0007333" /db_xref="UniProtKB/Swiss-Prot:P69407" /db_xref="EcoGene:EG10821" /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD" repeat_region 2186352..2186548 /note="RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site" gene complement(2186545..2189394) /gene="rcsC" /locus_tag="b2218" /gene_synonym="ECK2211" /gene_synonym="JW5917" /gene_synonym="JW5920" /db_xref="EcoGene:EG10822" CDS complement(2186545..2189394) /gene="rcsC" /locus_tag="b2218" /gene_synonym="ECK2211" /gene_synonym="JW5917" /gene_synonym="JW5920" /function="enzyme; Surface polysaccharides & antigens" /note="sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009242 - colanic acid biosynthetic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hybrid sensory kinase in two-component regulatory system with RcsB and YojN" /protein_id="AAC75278.2" /db_xref="GI:145693157" /db_xref="ASAP:ABE-0007336" /db_xref="UniProtKB/Swiss-Prot:P14376" /db_xref="EcoGene:EG10822" /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSW FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC LESGMDSCLSKPVTLDVIKQTLTLYAERVRKSRDS" gene 2189561..2191387 /gene="atoS" /locus_tag="b2219" /gene_synonym="ECK2212" /gene_synonym="JW2213" /db_xref="EcoGene:EG11667" CDS 2189561..2191387 /gene="atoS" /locus_tag="b2219" /gene_synonym="ECK2212" /gene_synonym="JW2213" /function="regulator; Not classified" /note="sensor protein AtoS for response regulator AtoC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with AtoC" /protein_id="AAC75279.1" /db_xref="GI:1788549" /db_xref="ASAP:ABE-0007341" /db_xref="UniProtKB/Swiss-Prot:Q06067" /db_xref="EcoGene:EG11667" /translation="MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVL SEKEKKLSAVVNLLNQALGDRYDLYIDLPREERIRALNAELAPITENITHAFPGIGAG YYNKMLDAIITYAPSALYQNNVGVTIAADHPGREVMRTNTPLVYSGRQVRGDILNSML PIERNGEILGYIWANELTEDIRRQAWKMDVRIIIVLTAGLLISLLLIVLFSRRLSANI DIITDGLSTLAQNIPTRLPQLPGEMGQISQSVNNLAQALRETRTLNDLIIENAADGVI AIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVALE ISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDLTARKETQRRMAQAERLATLGEL MAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQLLEFSRP RHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRELLKQVLLNIL INAVQAISARGKIRIQTWQYSDSQQAISIEDNGCGIDLSLQKKIFDPFFTTKASGTGL GLALSQRIINAHQGDIRVASLPGYGATFTLILPINPQGNQTV" gene 2191384..2192769 /gene="atoC" /locus_tag="b2220" /gene_synonym="Az" /gene_synonym="ECK2213" /gene_synonym="JW2214" /db_xref="EcoGene:EG11668" CDS 2191384..2192769 /gene="atoC" /locus_tag="b2220" /gene_synonym="Az" /gene_synonym="ECK2213" /gene_synonym="JW2214" /function="regulator; Degradation of small molecules: Fatty acids" /note="response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0006596 - polyamine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein" /protein_id="AAC75280.1" /db_xref="GI:1788550" /db_xref="ASAP:ABE-0007343" /db_xref="UniProtKB/Swiss-Prot:Q06065" /db_xref="EcoGene:EG11668" /translation="MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLF ADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDY VIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTA KIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHE KGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIK VDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKF SSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQ PVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYK LQEYGIDPADV" gene 2192965..2193627 /gene="atoD" /locus_tag="b2221" /gene_synonym="ECK2214" /gene_synonym="JW2215" /db_xref="EcoGene:EG11669" CDS 2192965..2193627 /gene="atoD" /locus_tag="b2221" /gene_synonym="ECK2214" /gene_synonym="JW2215" /EC_number="2.8.3.8" /function="enzyme; Degradation of small molecules: Fatty acids" /note="acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit" /protein_id="AAC75281.1" /db_xref="GI:1788551" /db_xref="ASAP:ABE-0007347" /db_xref="UniProtKB/Swiss-Prot:P76458" /db_xref="EcoGene:EG11669" /translation="MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGV RDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGT LIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCD TLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQE SK" gene 2193627..2194277 /gene="atoA" /locus_tag="b2222" /gene_synonym="ECK2215" /gene_synonym="JW2216" /db_xref="EcoGene:EG11670" CDS 2193627..2194277 /gene="atoA" /locus_tag="b2222" /gene_synonym="ECK2215" /gene_synonym="JW2216" /EC_number="2.8.3.8" /function="enzyme; Degradation of small molecules: Fatty acids" /note="acetyl-CoA:acetoacetyl-CoA transferase beta subunit; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acetyl-CoA:acetoacetyl-CoA transferase, beta subunit" /protein_id="AAC75282.1" /db_xref="GI:1788552" /db_xref="ASAP:ABE-0007349" /db_xref="UniProtKB/Swiss-Prot:P76459" /db_xref="EcoGene:EG11670" /translation="MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQ SENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQ VDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTA QHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL" gene 2194274..2195596 /gene="atoE" /locus_tag="b2223" /gene_synonym="ECK2216" /gene_synonym="JW2217" /db_xref="EcoGene:EG11671" CDS 2194274..2195596 /gene="atoE" /locus_tag="b2223" /gene_synonym="ECK2216" /gene_synonym="JW2217" /function="transport; Degradation of small molecules: Fatty acids" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="short chain fatty acid transporter" /protein_id="AAC75283.1" /db_xref="GI:1788553" /db_xref="ASAP:ABE-0007353" /db_xref="UniProtKB/Swiss-Prot:P76460" /db_xref="EcoGene:EG11671" /translation="MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPI SMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVT FFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL LAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPK LLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNL MFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFI NVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYG EQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF" gene 2195627..2196811 /gene="atoB" /locus_tag="b2224" /gene_synonym="ECK2217" /gene_synonym="JW2218" /db_xref="EcoGene:EG11672" CDS 2195627..2196811 /gene="atoB" /locus_tag="b2224" /gene_synonym="ECK2217" /gene_synonym="JW2218" /EC_number="2.3.1.9" /function="enzyme; Degradation of small molecules: Fatty acids" /note="GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="AAC75284.1" /db_xref="GI:1788554" /db_xref="ASAP:ABE-0007355" /db_xref="UniProtKB/Swiss-Prot:P76461" /db_xref="EcoGene:EG11672" /translation="MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKID SQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAI QAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGI TAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDE FPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARI KSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFD SEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIER LN" gene complement(2196885..2197661) /gene="yfaP" /locus_tag="b2225" /gene_synonym="ECK2218" /gene_synonym="JW2219" /db_xref="EcoGene:EG14078" CDS complement(2196885..2197661) /gene="yfaP" /locus_tag="b2225" /gene_synonym="ECK2218" /gene_synonym="JW2219" /codon_start=1 /transl_table=11 /product="DUF2135 family protein, putative host defense protein" /protein_id="AAC75285.1" /db_xref="GI:1788556" /db_xref="ASAP:ABE-0007357" /db_xref="UniProtKB/Swiss-Prot:P76462" /db_xref="EcoGene:EG14078" /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSF ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETE LTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW" gene complement(2197666..2199315) /gene="yfaQ" /locus_tag="b2226" /gene_synonym="ECK2219" /gene_synonym="JW2220" /db_xref="EcoGene:EG14079" CDS complement(2197666..2199315) /gene="yfaQ" /locus_tag="b2226" /gene_synonym="ECK2219" /gene_synonym="JW2220" /codon_start=1 /transl_table=11 /product="tandem DUF2300 domain protein, putative host defense protein" /protein_id="AAC75286.1" /db_xref="GI:1788557" /db_xref="ASAP:ABE-0007359" /db_xref="UniProtKB/Swiss-Prot:P76463" /db_xref="EcoGene:EG14079" /translation="MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGV TKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST TAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE AKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS TCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD" gene complement(2199316..2203920) /gene="yfaS" /locus_tag="b4500" /gene_synonym="ECK2220" /gene_synonym="JW2221" /gene_synonym="JW2222" /gene_synonym="yfaR" /pseudo /db_xref="EcoGene:EG14081" CDS complement(2199316..2203920) /gene="yfaS" /locus_tag="b4500" /gene_synonym="ECK2220" /gene_synonym="JW2221" /gene_synonym="JW2222" /gene_synonym="yfaR" /note="pseudogene, bacterial alpha2-macroglobulin YfaS variant family; putative membrane protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007362" /db_xref="ASAP:ABE-0007364" /db_xref="ASAP:ABE-0285101" /db_xref="UniProtKB/Swiss-Prot:P76464" /db_xref="EcoGene:EG14081" gene complement(2203854..2204477) /gene="yfaT" /locus_tag="b2229" /gene_synonym="ECK2221" /gene_synonym="JW2223" /db_xref="EcoGene:EG14082" CDS complement(2203854..2204477) /gene="yfaT" /locus_tag="b2229" /gene_synonym="ECK2221" /gene_synonym="JW2223" /codon_start=1 /transl_table=11 /product="DUF1175 family protein, putative host defense protein" /protein_id="AAC75289.2" /db_xref="GI:87082068" /db_xref="ASAP:ABE-0007366" /db_xref="UniProtKB/Swiss-Prot:P76466" /db_xref="EcoGene:EG14082" /translation="MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQ GPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNW NQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYH TGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR" gene complement(2204474..2206162) /gene="yfaA" /locus_tag="b2230" /gene_synonym="ECK2222" /gene_synonym="JW2224" /gene_synonym="pufY" /db_xref="EcoGene:EG11142" CDS complement(2204474..2206162) /gene="yfaA" /locus_tag="b2230" /gene_synonym="ECK2222" /gene_synonym="JW2224" /gene_synonym="pufY" /codon_start=1 /transl_table=11 /product="DUF2138 family protein, putative host defense protein" /protein_id="AAC75290.2" /db_xref="GI:87082069" /db_xref="ASAP:ABE-0007368" /db_xref="UniProtKB/Swiss-Prot:P17994" /db_xref="EcoGene:EG11142" /translation="MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSP LVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE GSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL LFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFK DDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMP SFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAE EMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNI GAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLA MQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLT SLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL" gene complement(2206311..2208938) /gene="gyrA" /locus_tag="b2231" /gene_synonym="ECK2223" /gene_synonym="hisW" /gene_synonym="JW2225" /gene_synonym="nalA" /gene_synonym="nfxA" /gene_synonym="norA" /gene_synonym="parD" /db_xref="EcoGene:EG10423" CDS complement(2206311..2208938) /gene="gyrA" /locus_tag="b2231" /gene_synonym="ECK2223" /gene_synonym="hisW" /gene_synonym="JW2225" /gene_synonym="nalA" /gene_synonym="nfxA" /gene_synonym="norA" /gene_synonym="parD" /EC_number="5.99.1.3" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA gyrase, subunit A, type II topoisomerase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DNA gyrase (type II topoisomerase), subunit A" /protein_id="AAC75291.1" /db_xref="GI:1788562" /db_xref="ASAP:ABE-0007370" /db_xref="UniProtKB/Swiss-Prot:P0AES4" /db_xref="EcoGene:EG10423" /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA EGDDEIAPEVDVDDEPEEE" gene 2209085..2209807 /gene="ubiG" /locus_tag="b2232" /gene_synonym="ECK2224" /gene_synonym="JW2226" /gene_synonym="pufX" /gene_synonym="yfaB" /db_xref="EcoGene:EG11143" CDS 2209085..2209807 /gene="ubiG" /locus_tag="b2232" /gene_synonym="ECK2224" /gene_synonym="JW2226" /gene_synonym="pufX" /gene_synonym="yfaB" /EC_number="2.1.1.64" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase" /protein_id="AAC75292.1" /db_xref="GI:1788564" /db_xref="ASAP:ABE-0007374" /db_xref="UniProtKB/Swiss-Prot:P17993" /db_xref="EcoGene:EG11143" /translation="MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP ITNTFKLGPGVDVNYMLHTQNK" repeat_region 2209831..2209912 /note="REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2209935..2213687) /gene="yfaL" /locus_tag="b2233" /gene_synonym="ECK2225" /gene_synonym="JW2227" /gene_synonym="yfaF" /gene_synonym="yfaJ" /gene_synonym="yfaK" /db_xref="EcoGene:EG12850" CDS complement(2209935..2213687) /gene="yfaL" /locus_tag="b2233" /gene_synonym="ECK2225" /gene_synonym="JW2227" /gene_synonym="yfaF" /gene_synonym="yfaJ" /gene_synonym="yfaK" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system" /codon_start=1 /transl_table=11 /product="adhesin" /protein_id="AAC75293.1" /db_xref="GI:1788565" /db_xref="ASAP:ABE-0007377" /db_xref="UniProtKB/Swiss-Prot:P45508" /db_xref="EcoGene:EG12850" /translation="MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQ ASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFAN NTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNA MFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSK HPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSA AGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSG DLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQN QAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSY VLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQS GTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANN NSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHG RDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSA VRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLR LTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNT SGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVN SITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLR SQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAF MMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEW MLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYA WFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAA NRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAV KQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW" gene 2214383..2216668 /gene="nrdA" /locus_tag="b2234" /gene_synonym="dnaF" /gene_synonym="ECK2226" /gene_synonym="JW2228" /db_xref="EcoGene:EG10660" CDS 2214383..2216668 /gene="nrdA" /locus_tag="b2234" /gene_synonym="dnaF" /gene_synonym="ECK2226" /gene_synonym="JW2228" /EC_number="1.17.4.1" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /experiment="N-terminus verified by Edman degradation: PMID 3894026" /note="ribonucleoside diphosphate reductase 1, alpha subunit, B1; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase 1, alpha subunit" /protein_id="AAC75294.1" /db_xref="GI:2367133" /db_xref="ASAP:ABE-0007383" /db_xref="UniProtKB/Swiss-Prot:P00452" /db_xref="EcoGene:EG10660" /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED AQDDLVPSIQDDGCESGACKI" repeat_region 2216678..2216880 /note="REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences" gene 2216902..2218032 /gene="nrdB" /locus_tag="b2235" /gene_synonym="ECK2227" /gene_synonym="ftsB" /gene_synonym="JW2229" /db_xref="EcoGene:EG10661" CDS 2216902..2218032 /gene="nrdB" /locus_tag="b2235" /gene_synonym="ECK2227" /gene_synonym="ftsB" /gene_synonym="JW2229" /EC_number="1.17.4.1" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /note="ribonucleoside-diphosphate reductase 1, beta subunit, B2; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein" /protein_id="AAC75295.1" /db_xref="GI:1788567" /db_xref="ASAP:ABE-0007386" /db_xref="UniProtKB/Swiss-Prot:P69924" /db_xref="EcoGene:EG10661" /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL" gene 2218032..2218286 /gene="yfaE" /locus_tag="b2236" /gene_synonym="ECK2228" /gene_synonym="JW2230" /db_xref="EcoGene:EG12360" CDS 2218032..2218286 /gene="yfaE" /locus_tag="b2236" /gene_synonym="ECK2228" /gene_synonym="JW2230" /codon_start=1 /transl_table=11 /product="ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance" /protein_id="AAC75296.1" /db_xref="GI:1788568" /db_xref="ASAP:ABE-0007390" /db_xref="UniProtKB/Swiss-Prot:P0ABW3" /db_xref="EcoGene:EG12360" /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM" repeat_region 2218299..2218334 /note="REP165 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2218340..2218990) /gene="inaA" /locus_tag="b2237" /gene_synonym="ECK2229" /gene_synonym="JW2231" /gene_synonym="yfaG" /db_xref="EcoGene:EG11422" CDS complement(2218340..2218990) /gene="inaA" /locus_tag="b2237" /gene_synonym="ECK2229" /gene_synonym="JW2231" /gene_synonym="yfaG" /function="phenotype; Adaptations, atypical conditions" /note="pH-inducible protein involved in stress response" /codon_start=1 /transl_table=11 /product="acid-inducible Kdo/WaaP family putative kinase" /protein_id="AAC75297.1" /db_xref="GI:1788569" /db_xref="ASAP:ABE-0007393" /db_xref="UniProtKB/Swiss-Prot:P27294" /db_xref="EcoGene:EG11422" /translation="MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKL YVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIY VKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM" gene 2219169..2219411 /gene="yfaH" /locus_tag="b2238" /gene_synonym="ECK2230" /gene_synonym="JW2232" /pseudo /db_xref="EcoGene:EG12881" CDS 2219169..2219411 /gene="yfaH" /locus_tag="b2238" /gene_synonym="ECK2230" /gene_synonym="JW2232" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007397" /db_xref="UniProtKB/Swiss-Prot:P45505" /db_xref="EcoGene:EG12881" gene complement(2219453..2220529) /gene="glpQ" /locus_tag="b2239" /gene_synonym="ECK2231" /gene_synonym="JW2233" /db_xref="EcoGene:EG10399" CDS complement(2219453..2220529) /gene="glpQ" /locus_tag="b2239" /gene_synonym="ECK2231" /gene_synonym="JW2233" /EC_number="3.1.4.46" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="glycerophosphodiester phosphodiesterase, periplasmic; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="periplasmic glycerophosphodiester phosphodiesterase" /protein_id="AAC75299.1" /db_xref="GI:1788572" /db_xref="ASAP:ABE-0007399" /db_xref="UniProtKB/Swiss-Prot:P09394" /db_xref="EcoGene:EG10399" /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP EHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRY YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL YNKAGVNGLFTDFPDKAVKFLNKE" gene complement(2220534..2221892) /gene="glpT" /locus_tag="b2240" /gene_synonym="ECK2232" /gene_synonym="JW2234" /db_xref="EcoGene:EG10401" CDS complement(2220534..2221892) /gene="glpT" /locus_tag="b2240" /gene_synonym="ECK2232" /gene_synonym="JW2234" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="sn-glycerol-3-phosphate permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="sn-glycerol-3-phosphate transporter" /protein_id="AAC75300.1" /db_xref="GI:1788573" /db_xref="ASAP:ABE-0007401" /db_xref="UniProtKB/Swiss-Prot:P08194" /db_xref="EcoGene:EG10401" /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERN GG" gene 2222165..2223793 /gene="glpA" /locus_tag="b2241" /gene_synonym="ECK2233" /gene_synonym="JW2235" /db_xref="EcoGene:EG10391" CDS 2222165..2223793 /gene="glpA" /locus_tag="b2241" /gene_synonym="ECK2233" /gene_synonym="JW2235" /EC_number="1.1.5.3" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 3286606" /note="sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit" /protein_id="AAC75301.1" /db_xref="GI:1788574" /db_xref="ASAP:ABE-0007422" /db_xref="UniProtKB/Swiss-Prot:P0A9C0" /db_xref="EcoGene:EG10391" /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL" gene 2223783..2225042 /gene="glpB" /locus_tag="b2242" /gene_synonym="ECK2234" /gene_synonym="glpC" /gene_synonym="JW2236" /gene_synonym="psi-51" /db_xref="EcoGene:EG10392" CDS 2223783..2225042 /gene="glpB" /locus_tag="b2242" /gene_synonym="ECK2234" /gene_synonym="glpC" /gene_synonym="JW2236" /gene_synonym="psi-51" /EC_number="1.1.5.3" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 3286606" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit" /protein_id="AAC75302.1" /db_xref="GI:1788575" /db_xref="ASAP:ABE-0007424" /db_xref="UniProtKB/Swiss-Prot:P13033" /db_xref="EcoGene:EG10392" /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS LDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQL QGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR ELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI LMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG DEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLD VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA QGCGGGVCAVSALHAAQQIAQRAGGQQ" gene 2225039..2226229 /gene="glpC" /locus_tag="b2243" /gene_synonym="ECK2235" /gene_synonym="glpB" /gene_synonym="JW2237" /db_xref="EcoGene:EG10393" CDS 2225039..2226229 /gene="glpC" /locus_tag="b2243" /gene_synonym="ECK2235" /gene_synonym="glpB" /gene_synonym="JW2237" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 3286606" /note="sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006071 - glycerol metabolic process" /codon_start=1 /transl_table=11 /product="anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster" /protein_id="AAC75303.1" /db_xref="GI:1788576" /db_xref="ASAP:ABE-0007426" /db_xref="UniProtKB/Swiss-Prot:P0A996" /db_xref="EcoGene:EG10393" /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYK DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAG TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA QALA" gene 2226422..2227321 /gene="yfaD" /locus_tag="b2244" /gene_synonym="ECK2236" /gene_synonym="JW2238" /db_xref="EcoGene:EG12323" CDS 2226422..2227321 /gene="yfaD" /locus_tag="b2244" /gene_synonym="ECK2236" /gene_synonym="JW2238" /codon_start=1 /transl_table=11 /product="transposase_31 family protein" /protein_id="AAC75304.1" /db_xref="GI:1788577" /db_xref="ASAP:ABE-0007429" /db_xref="UniProtKB/Swiss-Prot:P37014" /db_xref="EcoGene:EG12323" /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA MQRHQDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFLLVDIT IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE QGFEREIVLATTQLTDADIPNCH" gene 2227322..2227519 /gene="ypaA" /locus_tag="b4543" /gene_synonym="ECK2237" /gene_synonym="JW5964" /pseudo /db_xref="EcoGene:EG14427" CDS 2227322..2227519 /gene="ypaA" /locus_tag="b4543" /gene_synonym="ECK2237" /gene_synonym="JW5964" /note="pseudogene, C-terminal fragment, Transposase_31 family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285064" /db_xref="EcoGene:EG14427" gene complement(2227560..2228363) /gene="rhmA" /locus_tag="b2245" /gene_synonym="ECK2238" /gene_synonym="JW2239" /gene_synonym="yfaU" /db_xref="EcoGene:EG14083" CDS complement(2227560..2228363) /gene="rhmA" /locus_tag="b2245" /gene_synonym="ECK2238" /gene_synonym="JW2239" /gene_synonym="yfaU" /function="enzyme; Sugar metabolism" /codon_start=1 /transl_table=11 /product="2-keto-3-deoxy-L-rhamnonate aldolase" /protein_id="AAC75305.1" /db_xref="GI:1788578" /db_xref="ASAP:ABE-0007431" /db_xref="UniProtKB/Swiss-Prot:P76469" /db_xref="EcoGene:EG14083" /translation="MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLL IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTA EQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY" gene complement(2228381..2229670) /gene="rhmT" /locus_tag="b2246" /gene_synonym="ECK2239" /gene_synonym="JW2240" /gene_synonym="yfaV" /db_xref="EcoGene:EG14084" CDS complement(2228381..2229670) /gene="rhmT" /locus_tag="b2246" /gene_synonym="ECK2239" /gene_synonym="JW2240" /gene_synonym="yfaV" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative L-rhamnonate transporter" /protein_id="AAC75306.2" /db_xref="GI:87082071" /db_xref="ASAP:ABE-0007433" /db_xref="UniProtKB/Swiss-Prot:P76470" /db_xref="EcoGene:EG14084" /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD TEAKFLIVRTLLRAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQ LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH" gene complement(2229727..2230932) /gene="rhmD" /locus_tag="b2247" /gene_synonym="ECK2240" /gene_synonym="JW2241" /gene_synonym="yfaW" /db_xref="EcoGene:EG14085" CDS complement(2229727..2230932) /gene="rhmD" /locus_tag="b2247" /gene_synonym="ECK2240" /gene_synonym="JW2241" /gene_synonym="yfaW" /function="enzyme; Sugar metabolism" /note="putative racemase" /codon_start=1 /transl_table=11 /product="L-rhamnonate dehydratase" /protein_id="AAC75307.2" /db_xref="GI:226510960" /db_xref="ASAP:ABE-0007436" /db_xref="UniProtKB/Swiss-Prot:P77215" /db_xref="EcoGene:EG14085" /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG KCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGE HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRD CNLKRPYSH" gene complement(2230947..2231729) /gene="rhmR" /locus_tag="b2248" /gene_synonym="ECK2241" /gene_synonym="JW2242" /gene_synonym="yfaX" /db_xref="EcoGene:EG14086" CDS complement(2230947..2231729) /gene="rhmR" /locus_tag="b2248" /gene_synonym="ECK2241" /gene_synonym="JW2242" /gene_synonym="yfaX" /function="putative regulator; Not classified" /note="putative regulator; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator for the rhm operon" /protein_id="AAC75308.1" /db_xref="GI:1788581" /db_xref="ASAP:ABE-0007438" /db_xref="UniProtKB/Swiss-Prot:P77732" /db_xref="EcoGene:EG14086" /translation="MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYL LLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCH LGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGL VWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAIS VVGTRLQINEEYRDYLAGKAIACARDISRLLGWKSPFDLQAS" gene complement(2231949..2233151) /gene="yfaY" /locus_tag="b2249" /gene_synonym="cinA" /gene_synonym="ECK2242" /gene_synonym="JW2243" /db_xref="EcoGene:EG14087" CDS complement(2231949..2233151) /gene="yfaY" /locus_tag="b2249" /gene_synonym="cinA" /gene_synonym="ECK2242" /gene_synonym="JW2243" /codon_start=1 /transl_table=11 /product="inactive PncC family protein" /protein_id="AAC75309.1" /db_xref="GI:1788583" /db_xref="ASAP:ABE-0007441" /db_xref="UniProtKB/Swiss-Prot:P77808" /db_xref="EcoGene:EG14087" /translation="MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVG DNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMER YFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPII ELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQF TGGLLALQLSRAGAPLLACEVVPSQEETLAQTAHWITERRANHFAGLALAVSGFENEH LNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEV VESMTLSV" gene complement(2233251..2233793) /gene="yfaZ" /locus_tag="b2250" /gene_synonym="ECK2243" /gene_synonym="JW5371" /db_xref="EcoGene:EG14088" CDS complement(2233251..2233793) /gene="yfaZ" /locus_tag="b2250" /gene_synonym="ECK2243" /gene_synonym="JW5371" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane protein, putative porin" /protein_id="AAC75310.2" /db_xref="GI:87082072" /db_xref="ASAP:ABE-0007445" /db_xref="UniProtKB/Swiss-Prot:P76471" /db_xref="EcoGene:EG14088" /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTETT GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK DGNRDNAVADGPYVGVNASF" gene 2234072..2234497 /gene="nudI" /locus_tag="b2251" /gene_synonym="ECK2244" /gene_synonym="JW2245" /gene_synonym="yfaO" /db_xref="EcoGene:EG13275" CDS 2234072..2234497 /gene="nudI" /locus_tag="b2251" /gene_synonym="ECK2244" /gene_synonym="JW2245" /gene_synonym="yfaO" /codon_start=1 /transl_table=11 /product="nucleoside triphosphatase" /protein_id="AAC75311.1" /db_xref="GI:1788585" /db_xref="ASAP:ABE-0007449" /db_xref="UniProtKB/Swiss-Prot:P52006" /db_xref="EcoGene:EG13275" /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWAISGGGVEPGE RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN REVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLKGLL" gene complement(2234536..2235138) /gene="ais" /locus_tag="b2252" /gene_synonym="ECK2245" /gene_synonym="JW2246" /gene_synonym="pagH" /gene_synonym="pmrG" /db_xref="EcoGene:EG13155" CDS complement(2234536..2235138) /gene="ais" /locus_tag="b2252" /gene_synonym="ECK2245" /gene_synonym="JW2246" /gene_synonym="pagH" /gene_synonym="pmrG" /function="phenotype; Not classified" /note="protein induced by aluminum" /codon_start=1 /transl_table=11 /product="putative LPS core heptose(II)-phosphate phosphatase" /protein_id="AAC75312.1" /db_xref="GI:1788586" /db_xref="ASAP:ABE-0007451" /db_xref="UniProtKB/Swiss-Prot:P45565" /db_xref="EcoGene:EG13155" /translation="MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNK TLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFD LYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNH CLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH" gene 2235446..2236585 /gene="arnB" /locus_tag="b2253" /gene_synonym="ECK2246" /gene_synonym="JW5372" /gene_synonym="pgbP1" /gene_synonym="pmrH" /gene_synonym="yfbE" /db_xref="EcoGene:EG14089" CDS 2235446..2236585 /gene="arnB" /locus_tag="b2253" /gene_synonym="ECK2246" /gene_synonym="JW5372" /gene_synonym="pgbP1" /gene_synonym="pmrH" /gene_synonym="yfbE" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent" /protein_id="AAC75313.3" /db_xref="GI:145693159" /db_xref="ASAP:ABE-0007456" /db_xref="UniProtKB/Swiss-Prot:P77690" /db_xref="EcoGene:EG14089" /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ LTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPF QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR ERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ" gene 2236589..2237557 /gene="arnC" /locus_tag="b2254" /gene_synonym="ECK2247" /gene_synonym="JW2248" /gene_synonym="ORF2" /gene_synonym="pmrF" /gene_synonym="yfbF" /db_xref="EcoGene:EG14090" CDS 2236589..2237557 /gene="arnC" /locus_tag="b2254" /gene_synonym="ECK2247" /gene_synonym="JW2248" /gene_synonym="ORF2" /gene_synonym="pmrF" /gene_synonym="yfbF" /function="putative enzyme; Not classified" /note="putative sugar transferase" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate-L-Ara4FN transferase" /protein_id="AAC75314.1" /db_xref="GI:1788588" /db_xref="ASAP:ABE-0007458" /db_xref="UniProtKB/Swiss-Prot:P77757" /db_xref="EcoGene:EG14090" /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE" gene 2237557..2239539 /gene="arnA" /locus_tag="b2255" /gene_synonym="ECK2248" /gene_synonym="JW2249" /gene_synonym="pbgP3" /gene_synonym="pmrI" /gene_synonym="SAF" /gene_synonym="yfbG" /db_xref="EcoGene:EG14091" CDS 2237557..2239539 /gene="arnA" /locus_tag="b2255" /gene_synonym="ECK2248" /gene_synonym="JW2249" /gene_synonym="pbgP3" /gene_synonym="pmrI" /gene_synonym="SAF" /gene_synonym="yfbG" /EC_number="2.1.2.-" /EC_number="4.1.1.35" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 11248028" /note="putative transformylase" /codon_start=1 /transl_table=11 /product="fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase" /protein_id="AAC75315.1" /db_xref="GI:1788589" /db_xref="ASAP:ABE-0007460" /db_xref="UniProtKB/Swiss-Prot:P77398" /db_xref="EcoGene:EG14091" /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS VARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFN LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAIT LHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEI VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS" gene 2239536..2240426 /gene="arnD" /locus_tag="b2256" /gene_synonym="ECK2249" /gene_synonym="JW2250" /gene_synonym="pbgP4" /gene_synonym="pmrJ" /gene_synonym="yfbH" /db_xref="EcoGene:EG14092" CDS 2239536..2240426 /gene="arnD" /locus_tag="b2256" /gene_synonym="ECK2249" /gene_synonym="JW2250" /gene_synonym="pbgP4" /gene_synonym="pmrJ" /gene_synonym="yfbH" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate-alpha-L-ara4FN deformylase" /protein_id="AAC75316.1" /db_xref="GI:1788590" /db_xref="ASAP:ABE-0007462" /db_xref="UniProtKB/Swiss-Prot:P76472" /db_xref="EcoGene:EG14092" /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLL NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV RGNIAGREGWLGCQQIAGSR" gene 2240426..2242078 /gene="arnT" /locus_tag="b2257" /gene_synonym="ECK2250" /gene_synonym="JW2251" /gene_synonym="pbgE1" /gene_synonym="pmrK" /gene_synonym="pqaB" /gene_synonym="yfbI" /db_xref="EcoGene:EG14093" CDS 2240426..2242078 /gene="arnT" /locus_tag="b2257" /gene_synonym="ECK2250" /gene_synonym="JW2251" /gene_synonym="pbgE1" /gene_synonym="pmrK" /gene_synonym="pqaB" /gene_synonym="yfbI" /note="4-amino-4-deoxy-L-arabinose transferase (lipid A modification); GO_process: GO:0006950 - response to stress" /codon_start=1 /transl_table=11 /product="4-amino-4-deoxy-L-arabinose transferase" /protein_id="AAC75317.1" /db_xref="GI:1788591" /db_xref="ASAP:ABE-0007464" /db_xref="UniProtKB/Swiss-Prot:P76473" /db_xref="EcoGene:EG14093" /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT VLPWGLAIAQREPNFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW AFFGWYTLTNVEKTWPFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK" gene 2242075..2242410 /gene="arnE" /locus_tag="b4544" /gene_synonym="ECK2251" /gene_synonym="JW2252" /gene_synonym="pbgE2" /gene_synonym="pmrL" /gene_synonym="yfbW" /db_xref="EcoGene:EG14344" CDS 2242075..2242410 /gene="arnE" /locus_tag="b4544" /gene_synonym="ECK2251" /gene_synonym="JW2252" /gene_synonym="pbgE2" /gene_synonym="pmrL" /gene_synonym="yfbW" /function="transport; Transport of small molecules: lipids" /note="GO_component: GO:0016021 - integral to membrane" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit" /protein_id="ABD18693.1" /db_xref="GI:87082074" /db_xref="ASAP:ABE-0285065" /db_xref="UniProtKB/Swiss-Prot:Q47377" /db_xref="EcoGene:EG14344" /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG GIVILGSTV" gene 2242410..2242796 /gene="arnF" /locus_tag="b2258" /gene_synonym="ECK2252" /gene_synonym="JW5373" /gene_synonym="pbgE3" /gene_synonym="pmrM" /gene_synonym="yfbJ" /db_xref="EcoGene:EG14094" CDS 2242410..2242796 /gene="arnF" /locus_tag="b2258" /gene_synonym="ECK2252" /gene_synonym="JW5373" /gene_synonym="pbgE3" /gene_synonym="pmrM" /gene_synonym="yfbJ" /function="transport; Transport of small molecules: lipids" /note="putative transport/receptor protein" /codon_start=1 /transl_table=11 /product="undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit" /protein_id="AAC75318.2" /db_xref="GI:87082075" /db_xref="ASAP:ABE-0007466" /db_xref="UniProtKB/Swiss-Prot:P76474" /db_xref="EcoGene:EG14094" /translation="MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS LKALLGVACIMSGLMLIFLPTTKQRY" gene complement(2242790..2243056) /gene="pmrD" /locus_tag="b2259" /gene_synonym="ECK2253" /gene_synonym="JW2254" /db_xref="EcoGene:EG12671" CDS complement(2242790..2243056) /gene="pmrD" /locus_tag="b2259" /gene_synonym="ECK2253" /gene_synonym="JW2254" /function="putative transport; Drug/analog sensitivity" /note="an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS); GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="inactive two-component system connector protein" /protein_id="AAC75319.2" /db_xref="GI:87082076" /db_xref="ASAP:ABE-0007468" /db_xref="UniProtKB/Swiss-Prot:P37590" /db_xref="EcoGene:EG12671" /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ" gene complement(2243166..2244521) /gene="menE" /locus_tag="b2260" /gene_synonym="ECK2254" /gene_synonym="JW2255" /db_xref="EcoGene:EG12437" CDS complement(2243166..2244521) /gene="menE" /locus_tag="b2260" /gene_synonym="ECK2254" /gene_synonym="JW2255" /EC_number="6.2.1.26" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="O-succinylbenzoate-CoA ligase" /protein_id="AAC75320.1" /db_xref="GI:1788595" /db_xref="ASAP:ABE-0007471" /db_xref="UniProtKB/Swiss-Prot:P37353" /db_xref="EcoGene:EG12437" /translation="MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGF AVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQF ALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT RDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH RPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ Q" gene complement(2244518..2245480) /gene="menC" /locus_tag="b2261" /gene_synonym="ECK2255" /gene_synonym="JW2256" /db_xref="EcoGene:EG11532" CDS complement(2244518..2245480) /gene="menC" /locus_tag="b2261" /gene_synonym="ECK2255" /gene_synonym="JW2256" /EC_number="4.2.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="O-succinylbenzoyl-CoA synthase" /protein_id="AAC75321.1" /db_xref="GI:1788596" /db_xref="ASAP:ABE-0007473" /db_xref="UniProtKB/Swiss-Prot:P29208" /db_xref="EcoGene:EG11532" /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELTDTLPQAA NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL DANRAWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLAR IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL" gene complement(2245480..2246337) /gene="menB" /locus_tag="b2262" /gene_synonym="ECK2256" /gene_synonym="JW2257" /db_xref="EcoGene:EG11368" CDS complement(2245480..2246337) /gene="menB" /locus_tag="b2262" /gene_synonym="ECK2256" /gene_synonym="JW2257" /EC_number="4.1.3.36" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="dihydroxynaphtoic acid synthetase; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="dihydroxynaphthoic acid synthetase" /protein_id="AAC75322.1" /db_xref="GI:1788597" /db_xref="ASAP:ABE-0007476" /db_xref="UniProtKB/Swiss-Prot:P0ABU0" /db_xref="EcoGene:EG11368" /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP DFSKFKRNP" gene complement(2246352..2247110) /gene="menH" /locus_tag="b2263" /gene_synonym="ECK2257" /gene_synonym="JW2258" /gene_synonym="yfbB" /db_xref="EcoGene:EG12438" CDS complement(2246352..2247110) /gene="menH" /locus_tag="b2263" /gene_synonym="ECK2257" /gene_synonym="JW2258" /gene_synonym="yfbB" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase" /protein_id="AAC75323.1" /db_xref="GI:1788598" /db_xref="ASAP:ABE-0007478" /db_xref="UniProtKB/Swiss-Prot:P37355" /db_xref="EcoGene:EG12438" /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG LCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQ RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF" gene complement(2247107..2248777) /gene="menD" /locus_tag="b2264" /gene_synonym="ECK2258" /gene_synonym="JW5374" /db_xref="EcoGene:EG10579" CDS complement(2247107..2248777) /gene="menD" /locus_tag="b2264" /gene_synonym="ECK2258" /gene_synonym="JW5374" /EC_number="2.2.1.9" /EC_number="4.1.1.71" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="2-oxoglutarate decarboxylase; SHCHC synthase; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase" /protein_id="AAC75324.1" /db_xref="GI:1788599" /db_xref="ASAP:ABE-0007482" /db_xref="UniProtKB/Swiss-Prot:P17109" /db_xref="EcoGene:EG10579" /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWR QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSL VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL" gene complement(2248866..2250161) /gene="menF" /locus_tag="b2265" /gene_synonym="ECK2259" /gene_synonym="JW2260" /gene_synonym="yfbA" /db_xref="EcoGene:EG12362" CDS complement(2248866..2250161) /gene="menF" /locus_tag="b2265" /gene_synonym="ECK2259" /gene_synonym="JW2260" /gene_synonym="yfbA" /EC_number="5.4.4.2" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="isochorismate hydroxymutase 2, menaquinone biosynthesis; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="isochorismate synthase 2" /protein_id="AAC75325.2" /db_xref="GI:87082077" /db_xref="ASAP:ABE-0007485" /db_xref="UniProtKB/Swiss-Prot:P38051" /db_xref="EcoGene:EG12362" /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL ASQQTYPQFYWQQRNGDEEAVVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLM ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME" gene complement(2250240..2250545) /gene="elaB" /locus_tag="b2266" /gene_synonym="ECK2260" /gene_synonym="JW2261" /gene_synonym="yfbD" /db_xref="EcoGene:EG13185" CDS complement(2250240..2250545) /gene="elaB" /locus_tag="b2266" /gene_synonym="ECK2260" /gene_synonym="JW2261" /gene_synonym="yfbD" /codon_start=1 /transl_table=11 /product="putative membrane-anchored DUF883 family ribosome-binding protein" /protein_id="AAC75326.1" /db_xref="GI:1788601" /db_xref="ASAP:ABE-0007487" /db_xref="UniProtKB/Swiss-Prot:P0AEH5" /db_xref="EcoGene:EG13185" /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE KALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR" gene complement(2250600..2251061) /gene="elaA" /locus_tag="b2267" /gene_synonym="ECK2261" /gene_synonym="JW2262" /gene_synonym="yfbC" /db_xref="EcoGene:EG13184" CDS complement(2250600..2251061) /gene="elaA" /locus_tag="b2267" /gene_synonym="ECK2261" /gene_synonym="JW2262" /gene_synonym="yfbC" /codon_start=1 /transl_table=11 /product="GNAT family putative N-acetyltransferase" /protein_id="AAC75327.1" /db_xref="GI:1788602" /db_xref="ASAP:ABE-0007489" /db_xref="UniProtKB/Swiss-Prot:P0AEH3" /db_xref="EcoGene:EG13184" /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLET CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA" gene 2251126..2252043 /gene="rbn" /locus_tag="b2268" /gene_synonym="ECK2262" /gene_synonym="ecoZ" /gene_synonym="elaC" /gene_synonym="JW2263" /gene_synonym="rnz" /gene_synonym="zipD" /db_xref="EcoGene:EG14260" CDS 2251126..2252043 /gene="rbn" /locus_tag="b2268" /gene_synonym="ECK2262" /gene_synonym="ecoZ" /gene_synonym="elaC" /gene_synonym="JW2263" /gene_synonym="rnz" /gene_synonym="zipD" /codon_start=1 /transl_table=11 /product="RNase BN, tRNA processing enzyme" /protein_id="AAC75328.2" /db_xref="GI:87082078" /db_xref="ASAP:ABE-0007496" /db_xref="UniProtKB/Swiss-Prot:P0A8V0" /db_xref="EcoGene:EG14260" /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD DKGCQHLLRECRSIFPATELANDFTVFNV" gene 2252231..2253442 /gene="elaD" /locus_tag="b2269" /gene_synonym="ECK2263" /gene_synonym="JW5840" /db_xref="EcoGene:EG14261" CDS 2252231..2253442 /gene="elaD" /locus_tag="b2269" /gene_synonym="ECK2263" /gene_synonym="JW5840" /function="putative enzyme; Not classified" /note="putative sulfatase / phosphatase" /codon_start=1 /transl_table=11 /product="protease, capable of cleaving an AMC-ubiquitin model substrate" /protein_id="AAC75329.1" /db_xref="GI:1788604" /db_xref="ASAP:ABE-0007499" /db_xref="UniProtKB/Swiss-Prot:Q47013" /db_xref="EcoGene:EG14261" /translation="MMVTVVSNYCQLSQTQLSQTFAEKFTVTEELLQSLKKTALSGDE ESIELLHNIALGYDKFGKEAEDILYHIVRTPTNETLSIIRLIKNACLKLYNLAHIATN SPLKSHDSDDLLFKKLFSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDGTNFW DKNRQLTTDEIACYLQKIAANAKNTQVNYPTGLYVPYSTRTHLEDALNENIKSDPSWP NEVQLFPINTGGHWILVSLQKIVNKKNNKLQIKCVIFNSLRALGYDKENSLKRVINSF NSELMGEMSNNNIKVHLNEPEIIFLHADLQQYLSQSCGAFVCMAAQEVIEQRESNSDS APYTLLKNHADRFKKYSAEEQYEIDFQHRLANRNCYLDKYGDANINHYYRNLEIKHSQ PKNRASGKRVS" gene complement(2253513..2255240) /gene="yfbK" /locus_tag="b2270" /gene_synonym="ECK2264" /gene_synonym="JW2265" /db_xref="EcoGene:EG14095" CDS complement(2253513..2255240) /gene="yfbK" /locus_tag="b2270" /gene_synonym="ECK2264" /gene_synonym="JW2265" /codon_start=1 /transl_table=11 /product="Von Willebrand factor domain putative lipoprotein" /protein_id="AAC75330.1" /db_xref="GI:1788606" /db_xref="ASAP:ABE-0007501" /db_xref="UniProtKB/Swiss-Prot:P76481" /db_xref="EcoGene:EG14095" /translation="MRNKNIIMLLMSSLILSGCGPQPENKESQQQQPSTPTEQQVLAA QQAAIKEAEQSAAAAKALAQQEVQQYSDKQALQGRLQEAPTFARAAKAKATHIANPGT ARYQQFDDNPVKQVAQNPLATFSLDVDTGSYANVRRFLNQGLLPPPDAVRVEEIVNYF PSDWDIKDKQSIPASKPIPFAMRYELAPAPWNEQRTLLKVDILAKDRKSEELPASNLV FLIDTSGSMISDERLPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALPSISGSHKAE INAAIDSLDAEGSTNGGAGLELAYQQATKGFIKGGINRILLATDGDFNVGIDDPKSIE SMVKKQRESGVTLSTFGVGNSNYNEAMMVRIADVGNGNYSYIDTLSEAQKVLNSEMRQ MLITVAKDVKAQIEFNPAWVTEYRQIGYEKRQLRVEHFNNDNVDAGDIGAGKHITLLF ELTLNGQKASIDKLRYAPDNKLAKSDKTKELAWLKIRWKYPQGKESQLVEFPLGPTIN APSEDMRFRAAVAAYGQKLRGSEYLNNTSWQQIKQWAQQAKGEDPQGYRAEFIRLIEL ADGVTDISQ" gene 2255378..2256349 /gene="yfbL" /locus_tag="b2271" /gene_synonym="ECK2265" /gene_synonym="JW2266" /db_xref="EcoGene:EG14096" CDS 2255378..2256349 /gene="yfbL" /locus_tag="b2271" /gene_synonym="ECK2265" /gene_synonym="JW2266" /function="putative enzyme; Not classified" /note="putative aminopeptidase" /codon_start=1 /transl_table=11 /product="putative M28A family peptidase" /protein_id="AAC75331.2" /db_xref="GI:87082079" /db_xref="ASAP:ABE-0007506" /db_xref="UniProtKB/Swiss-Prot:P76482" /db_xref="EcoGene:EG14096" /translation="MKKIIFAFIILFVFLLPMIIFYQPWVNALPSTPRHASPEQLEKT VRYLTQTVHPRSADNIDNLNRSAEYIKEVFVSSGARVTSQDVPITGGPYKNIVADYGP ADGPLIIIGAHYDSASSYENDQLTYTPGADDNASGVAGLLELARLLHQQVPKTGVQLV AYASEEPPFFRSDEMGSAVHAASLERPVKLMIALEMIGYYDSAPGSQNYPYPAMSWLY PDRGDFIAVVGRIQDINAVRQVKAALLSSQDLSVYSMNTPGFIPGIDFSDHLNYWQHD IPAIMITDTAFYRNKQYHLPGDTADRLNYQKMAQVVDGVITLLYNSK" gene 2256452..2256955 /gene="yfbM" /locus_tag="b2272" /gene_synonym="ECK2266" /gene_synonym="JW2267" /db_xref="EcoGene:EG14097" CDS 2256452..2256955 /gene="yfbM" /locus_tag="b2272" /gene_synonym="ECK2266" /gene_synonym="JW2267" /codon_start=1 /transl_table=11 /product="DUF1877 family protein" /protein_id="AAC75332.1" /db_xref="GI:1788608" /db_xref="ASAP:ABE-0007509" /db_xref="UniProtKB/Swiss-Prot:P76483" /db_xref="EcoGene:EG14097" /translation="MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDK RWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLES LDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNH ALTVIVG" gene complement(2257228..2257944) /gene="yfbN" /locus_tag="b2273" /gene_synonym="ECK2267" /gene_synonym="JW2268" /db_xref="EcoGene:EG14098" CDS complement(2257228..2257944) /gene="yfbN" /locus_tag="b2273" /gene_synonym="ECK2267" /gene_synonym="JW2268" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75333.1" /db_xref="GI:1788609" /db_xref="ASAP:ABE-0007511" /db_xref="UniProtKB/Swiss-Prot:P76484" /db_xref="EcoGene:EG14098" /translation="MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQI NILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIA LAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQ QLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSIL LQFVKDNIDVFPCRHNRHEL" gene 2258153..2258575 /gene="yfbO" /locus_tag="b2274" /gene_synonym="ECK2268" /gene_synonym="JW2269" /db_xref="EcoGene:EG14099" CDS 2258153..2258575 /gene="yfbO" /locus_tag="b2274" /gene_synonym="ECK2268" /gene_synonym="JW2269" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75334.2" /db_xref="GI:226510961" /db_xref="ASAP:ABE-0007518" /db_xref="UniProtKB/Swiss-Prot:P76485" /db_xref="EcoGene:EG14099" /translation="MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICC NVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQS WFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD" gene 2258634..2259482 /gene="yfbP" /locus_tag="b2275" /gene_synonym="ECK2269" /gene_synonym="JW2270" /db_xref="EcoGene:EG14100" CDS 2258634..2259482 /gene="yfbP" /locus_tag="b2275" /gene_synonym="ECK2269" /gene_synonym="JW2270" /codon_start=1 /transl_table=11 /product="TPR-like repeats-containing protein" /protein_id="AAC75335.2" /db_xref="GI:345297176" /db_xref="ASAP:ABE-0007524" /db_xref="UniProtKB/Swiss-Prot:P76486" /db_xref="EcoGene:EG14100" /translation="MKLIPRSSDISPGIDGICPGPFPPNGFTVLTDAAYGNGDCFGLY WPIGQEHKLPIVCETYHDEWRIVPAFSSIKKFEEWLEVNDDDPHENGISIEDQDFAAN LFRVARKCLSTGRLDDALPLLQRATEQLPEVSEYWLALAIQYRRCKKTEAAAQAALNA YLGNWAFGVPDNKVIHLLSQAADVPNFQDDPVIQCIKEQGLDLSFGGTKENNNYPLMQ MCVDTYFAQRKPLQALTLLHNYAWIMSSETTAFQERYDFNIDEWRAKFRQLCLEYFGD SRTQFT" gene complement(2259566..2261023) /gene="nuoN" /locus_tag="b2276" /gene_synonym="ECK2270" /gene_synonym="JW2271" /db_xref="EcoGene:EG12093" CDS complement(2259566..2261023) /gene="nuoN" /locus_tag="b2276" /gene_synonym="ECK2270" /gene_synonym="JW2271" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain N; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit N" /protein_id="AAC75336.2" /db_xref="GI:145693160" /db_xref="ASAP:ABE-0007526" /db_xref="UniProtKB/Swiss-Prot:P0AFF0" /db_xref="EcoGene:EG12093" /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKL SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY SAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM" gene complement(2261030..2262559) /gene="nuoM" /locus_tag="b2277" /gene_synonym="ECK2271" /gene_synonym="JW2272" /gene_synonym="nuoA" /db_xref="EcoGene:EG11773" CDS complement(2261030..2262559) /gene="nuoM" /locus_tag="b2277" /gene_synonym="ECK2271" /gene_synonym="JW2272" /gene_synonym="nuoA" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain M; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit M" /protein_id="AAC75337.1" /db_xref="GI:1788613" /db_xref="ASAP:ABE-0007529" /db_xref="UniProtKB/Swiss-Prot:P0AFE8" /db_xref="EcoGene:EG11773" /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSL QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR P" repeat_region 2262649..2262684 /note="REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2262723..2264564) /gene="nuoL" /locus_tag="b2278" /gene_synonym="ECK2272" /gene_synonym="JW2273" /db_xref="EcoGene:EG12092" CDS complement(2262723..2264564) /gene="nuoL" /locus_tag="b2278" /gene_synonym="ECK2272" /gene_synonym="JW2273" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain L; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit L" /protein_id="AAC75338.1" /db_xref="GI:1788614" /db_xref="ASAP:ABE-0007532" /db_xref="UniProtKB/Swiss-Prot:P33607" /db_xref="EcoGene:EG12092" /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV TAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLV TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLA AWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR" gene complement(2264561..2264863) /gene="nuoK" /locus_tag="b2279" /gene_synonym="ECK2273" /gene_synonym="JW2274" /db_xref="EcoGene:EG12091" CDS complement(2264561..2264863) /gene="nuoK" /locus_tag="b2279" /gene_synonym="ECK2273" /gene_synonym="JW2274" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain K; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit K" /protein_id="AAC75339.1" /db_xref="GI:1788615" /db_xref="ASAP:ABE-0007534" /db_xref="UniProtKB/Swiss-Prot:P0AFE4" /db_xref="EcoGene:EG12091" /translation="MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG" gene complement(2264860..2265414) /gene="nuoJ" /locus_tag="b2280" /gene_synonym="ECK2274" /gene_synonym="JW2275" /db_xref="EcoGene:EG12090" CDS complement(2264860..2265414) /gene="nuoJ" /locus_tag="b2280" /gene_synonym="ECK2274" /gene_synonym="JW2275" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain J; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit J" /protein_id="AAC75340.1" /db_xref="GI:1788616" /db_xref="ASAP:ABE-0007536" /db_xref="UniProtKB/Swiss-Prot:P0AFE0" /db_xref="EcoGene:EG12090" /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR EERAGEVLSNRKDDSAKRKTEEHA" gene complement(2265426..2265968) /gene="nuoI" /locus_tag="b2281" /gene_synonym="ECK2275" /gene_synonym="JW2276" /db_xref="EcoGene:EG12089" CDS complement(2265426..2265968) /gene="nuoI" /locus_tag="b2281" /gene_synonym="ECK2275" /gene_synonym="JW2276" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 9298646,11416161" /note="NADH dehydrogenase I chain I; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain I" /protein_id="AAC75341.1" /db_xref="GI:1788617" /db_xref="ASAP:ABE-0007539" /db_xref="UniProtKB/Swiss-Prot:P0AFD6" /db_xref="EcoGene:EG12089" /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG KDKGEAENEAKPIDVKSLLP" gene complement(2265983..2266960) /gene="nuoH" /locus_tag="b2282" /gene_synonym="ECK2276" /gene_synonym="JW2277" /db_xref="EcoGene:EG12088" CDS complement(2265983..2266960) /gene="nuoH" /locus_tag="b2282" /gene_synonym="ECK2276" /gene_synonym="JW2277" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain H; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit H" /protein_id="AAC75342.1" /db_xref="GI:1788618" /db_xref="ASAP:ABE-0007541" /db_xref="UniProtKB/Swiss-Prot:P0AFD4" /db_xref="EcoGene:EG12088" /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ" gene complement(2266957..2269683) /gene="nuoG" /locus_tag="b2283" /gene_synonym="ECK2277" /gene_synonym="JW2278" /db_xref="EcoGene:EG12087" CDS complement(2266957..2269683) /gene="nuoG" /locus_tag="b2283" /gene_synonym="ECK2277" /gene_synonym="JW2278" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain G; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain G" /protein_id="AAC75343.2" /db_xref="GI:145693161" /db_xref="ASAP:ABE-0007543" /db_xref="UniProtKB/Swiss-Prot:P33602" /db_xref="EcoGene:EG12087" /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV LENDLHRHASAIRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ" gene complement(2269736..2271073) /gene="nuoF" /locus_tag="b2284" /gene_synonym="ECK2278" /gene_synonym="JW2279" /gene_synonym="nuoB" /db_xref="EcoGene:EG11774" CDS complement(2269736..2271073) /gene="nuoF" /locus_tag="b2284" /gene_synonym="ECK2278" /gene_synonym="JW2279" /gene_synonym="nuoB" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 11416161,11997136" /note="NADH dehydrogenase I chain F; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain F" /protein_id="AAC75344.1" /db_xref="GI:1788620" /db_xref="ASAP:ABE-0007545" /db_xref="UniProtKB/Swiss-Prot:P31979" /db_xref="EcoGene:EG11774" /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW" gene complement(2271070..2271570) /gene="nuoE" /locus_tag="b2285" /gene_synonym="ECK2279" /gene_synonym="JW2280" /db_xref="EcoGene:EG12086" CDS complement(2271070..2271570) /gene="nuoE" /locus_tag="b2285" /gene_synonym="ECK2279" /gene_synonym="JW2280" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 11416161,11997136" /note="NADH dehydrogenase I chain E; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain E" /protein_id="AAC75345.1" /db_xref="GI:1788621" /db_xref="ASAP:ABE-0007547" /db_xref="UniProtKB/Swiss-Prot:P0AFD1" /db_xref="EcoGene:EG12086" /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE LLERYK" gene complement(2271573..2273363) /gene="nuoC" /locus_tag="b2286" /gene_synonym="ECK2280" /gene_synonym="JW5375" /gene_synonym="nuoCD" /gene_synonym="nuoD" /db_xref="EcoGene:EG12084" CDS complement(2271573..2273363) /gene="nuoC" /locus_tag="b2286" /gene_synonym="ECK2280" /gene_synonym="JW5375" /gene_synonym="nuoCD" /gene_synonym="nuoD" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain C, D; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, fused CD subunit" /protein_id="AAC75346.2" /db_xref="GI:145693162" /db_xref="ASAP:ABE-0007549" /db_xref="UniProtKB/Swiss-Prot:P33599" /db_xref="EcoGene:EG12084" /translation="MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVP VVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTW KGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGP NHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGG CVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFF AFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEK AALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEI PVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHI ETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQ QIPAAIRGSLVSDLIVYLGSIDFVMSDVDR" gene complement(2273469..2274131) /gene="nuoB" /locus_tag="b2287" /gene_synonym="ECK2281" /gene_synonym="JW5875" /db_xref="EcoGene:EG12083" CDS complement(2273469..2274131) /gene="nuoB" /locus_tag="b2287" /gene_synonym="ECK2281" /gene_synonym="JW5875" /EC_number="1.6.5.3" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 7607227,11997136" /note="NADH dehydrogenase I chain B; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, chain B" /protein_id="AAC75347.1" /db_xref="GI:1788624" /db_xref="ASAP:ABE-0007551" /db_xref="UniProtKB/Swiss-Prot:P0AFC7" /db_xref="EcoGene:EG12083" /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD EI" gene complement(2274147..2274590) /gene="nuoA" /locus_tag="b2288" /gene_synonym="ECK2282" /gene_synonym="JW2283" /db_xref="EcoGene:EG12082" CDS complement(2274147..2274590) /gene="nuoA" /locus_tag="b2288" /gene_synonym="ECK2282" /gene_synonym="JW2283" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="NADH dehydrogenase I chain A; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase, membrane subunit A" /protein_id="AAC75348.1" /db_xref="GI:1788625" /db_xref="ASAP:ABE-0007553" /db_xref="UniProtKB/Swiss-Prot:P0AFC3" /db_xref="EcoGene:EG12082" /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR" gene complement(2275221..2276159) /gene="lrhA" /locus_tag="b2289" /gene_synonym="ECK2283" /gene_synonym="genR" /gene_synonym="hexA" /gene_synonym="JW2284" /db_xref="EcoGene:EG12123" CDS complement(2275221..2276159) /gene="lrhA" /locus_tag="b2289" /gene_synonym="ECK2283" /gene_synonym="genR" /gene_synonym="hexA" /gene_synonym="JW2284" /function="regulator; Energy metabolism, carbon: Aerobic respiration" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor of flagellar, motility and chemotaxis genes" /protein_id="AAC75349.1" /db_xref="GI:1788626" /db_xref="ASAP:ABE-0007555" /db_xref="UniProtKB/Swiss-Prot:P36771" /db_xref="EcoGene:EG12123" /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA FKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE" gene 2277079..2278296 /gene="alaA" /locus_tag="b2290" /gene_synonym="ECK2284" /gene_synonym="JW2287" /gene_synonym="yfbQ" /db_xref="EcoGene:EG14101" CDS 2277079..2278296 /gene="alaA" /locus_tag="b2290" /gene_synonym="ECK2284" /gene_synonym="JW2287" /gene_synonym="yfbQ" /EC_number="2.6.1.2" /function="enzyme; Amino acid biosynthesis: Alanine" /note="putative aminotransferase" /codon_start=1 /transl_table=11 /product="glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase" /protein_id="AAC75350.1" /db_xref="GI:1788627" /db_xref="ASAP:ABE-0007560" /db_xref="UniProtKB/Swiss-Prot:P0A959" /db_xref="EcoGene:EG14101" /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL SKFARFLSGYHQL" repeat_region 2278310..2278328 /note="REP167 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2278380..2278979 /gene="yfbR" /locus_tag="b2291" /gene_synonym="ECK2285" /gene_synonym="JW2288" /db_xref="EcoGene:EG14102" CDS 2278380..2278979 /gene="yfbR" /locus_tag="b2291" /gene_synonym="ECK2285" /gene_synonym="JW2288" /function="phenotype; Not classified" /note="putative alpha helix protein" /codon_start=1 /transl_table=11 /product="5'-nucleotidase" /protein_id="AAC75351.1" /db_xref="GI:1788628" /db_xref="ASAP:ABE-0007563" /db_xref="UniProtKB/Swiss-Prot:P76491" /db_xref="EcoGene:EG14102" /translation="MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHAL AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK TRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL" repeat_region 2279014..2279032 /note="REP168 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2279038..2280870) /gene="yfbS" /locus_tag="b2292" /gene_synonym="ECK2286" /gene_synonym="JW2289" /db_xref="EcoGene:EG14103" CDS complement(2279038..2280870) /gene="yfbS" /locus_tag="b2292" /gene_synonym="ECK2286" /gene_synonym="JW2289" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC75352.1" /db_xref="GI:1788629" /db_xref="ASAP:ABE-0007565" /db_xref="UniProtKB/Swiss-Prot:P0AFU2" /db_xref="EcoGene:EG14103" /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV VNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF" gene complement(2280957..2281607) /gene="yfbT" /locus_tag="b2293" /gene_synonym="ECK2287" /gene_synonym="JW5376" /db_xref="EcoGene:EG14104" CDS complement(2280957..2281607) /gene="yfbT" /locus_tag="b2293" /gene_synonym="ECK2287" /gene_synonym="JW5376" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="sugar phosphatas" /protein_id="AAC75353.2" /db_xref="GI:87082080" /db_xref="ASAP:ABE-0007567" /db_xref="UniProtKB/Swiss-Prot:P77625" /db_xref="EcoGene:EG14104" /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH GKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETEGITALPGAIALLSHLNKAGIPW AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ" gene complement(2281618..2282112) /gene="yfbU" /locus_tag="b2294" /gene_synonym="ECK2288" /gene_synonym="JW2291" /db_xref="EcoGene:EG14105" CDS complement(2281618..2282112) /gene="yfbU" /locus_tag="b2294" /gene_synonym="ECK2288" /gene_synonym="JW2291" /codon_start=1 /transl_table=11 /product="UPF0304 family protein" /protein_id="AAC75354.2" /db_xref="GI:87082081" /db_xref="ASAP:ABE-0007571" /db_xref="UniProtKB/Swiss-Prot:P0A8W8" /db_xref="EcoGene:EG14105" /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ IINA" gene complement(2282195..2282650) /gene="yfbV" /locus_tag="b2295" /gene_synonym="ECK2289" /gene_synonym="JW2292" /db_xref="EcoGene:EG14106" CDS complement(2282195..2282650) /gene="yfbV" /locus_tag="b2295" /gene_synonym="ECK2289" /gene_synonym="JW2292" /codon_start=1 /transl_table=11 /product="UPF0208 family inner membrane protein" /protein_id="AAC75355.1" /db_xref="GI:1788632" /db_xref="ASAP:ABE-0007575" /db_xref="UniProtKB/Swiss-Prot:P0A8D9" /db_xref="EcoGene:EG14106" /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL" gene 2282988..2284190 /gene="ackA" /locus_tag="b2296" /gene_synonym="ECK2290" /gene_synonym="JW2293" /db_xref="EcoGene:EG10027" CDS 2282988..2284190 /gene="ackA" /locus_tag="b2296" /gene_synonym="ECK2290" /gene_synonym="JW2293" /EC_number="2.7.2.-" /EC_number="2.7.2.1" /function="enzyme; Energy metabolism, carbon: Electron transport" /note="acetate kinase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0042867 - pyruvate catabolic process; GO_process: GO:0045733 - acetate catabolic process" /codon_start=1 /transl_table=11 /product="acetate kinase A and propionate kinase 2" /protein_id="AAC75356.1" /db_xref="GI:1788633" /db_xref="ASAP:ABE-0007579" /db_xref="UniProtKB/Swiss-Prot:P0A6A3" /db_xref="EcoGene:EG10027" /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA QDASRLTA" gene 2284265..2286409 /gene="pta" /locus_tag="b2297" /gene_synonym="ECK2291" /gene_synonym="JW2294" /db_xref="EcoGene:EG20173" CDS 2284265..2286409 /gene="pta" /locus_tag="b2297" /gene_synonym="ECK2291" /gene_synonym="JW2294" /EC_number="2.3.1.8" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="phosphotransacetylase; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0042867 - pyruvate catabolic process; GO_process: GO:0045733 - acetate catabolic process" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /protein_id="AAC75357.1" /db_xref="GI:1788635" /db_xref="ASAP:ABE-0007582" /db_xref="UniProtKB/Swiss-Prot:P0A9M8" /db_xref="EcoGene:EG20173" /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT NTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ" gene 2286599..2288119 /gene="yfcC" /locus_tag="b2298" /gene_synonym="ECK2292" /gene_synonym="JW2295" /db_xref="EcoGene:EG12607" CDS 2286599..2288119 /gene="yfcC" /locus_tag="b2298" /gene_synonym="ECK2292" /gene_synonym="JW2295" /function="putative enzyme; Not classified" /note="putative S-transferase; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative inner membrane transporter; C4-dicarboxylate anaerobic carrier family protein" /protein_id="AAC75358.2" /db_xref="GI:87082082" /db_xref="ASAP:ABE-0007585" /db_xref="UniProtKB/Swiss-Prot:P39263" /db_xref="EcoGene:EG12607" /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ GIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH" gene complement(2288152..2288694) /gene="yfcD" /locus_tag="b2299" /gene_synonym="ECK2293" /gene_synonym="JW2296" /db_xref="EcoGene:EG14107" CDS complement(2288152..2288694) /gene="yfcD" /locus_tag="b2299" /gene_synonym="ECK2293" /gene_synonym="JW2296" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="putative NUDIX hydrolase" /protein_id="AAC75359.1" /db_xref="GI:1788637" /db_xref="ASAP:ABE-0007587" /db_xref="UniProtKB/Swiss-Prot:P65556" /db_xref="EcoGene:EG14107" /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA LALWMKRNAKNEAVETETAE" gene complement(2288752..2289306) /gene="yfcE" /locus_tag="b2300" /gene_synonym="ECK2294" /gene_synonym="JW5377" /db_xref="EcoGene:EG14108" CDS complement(2288752..2289306) /gene="yfcE" /locus_tag="b2300" /gene_synonym="ECK2294" /gene_synonym="JW5377" /codon_start=1 /transl_table=11 /product="phosphodiesterase activity on bis-pNPP" /protein_id="AAC75360.1" /db_xref="GI:1788638" /db_xref="ASAP:ABE-0007589" /db_xref="UniProtKB/Swiss-Prot:P67095" /db_xref="EcoGene:EG14108" /translation="MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPR NALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLF LTHGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGM LDNDVLSVIALNDQSIIAQVAINP" gene complement(2289359..2290003) /gene="yfcF" /locus_tag="b2301" /gene_synonym="ECK2295" /gene_synonym="JW2298" /db_xref="EcoGene:EG14109" CDS complement(2289359..2290003) /gene="yfcF" /locus_tag="b2301" /gene_synonym="ECK2295" /gene_synonym="JW2298" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="AAC75361.1" /db_xref="GI:1788639" /db_xref="ASAP:ABE-0007593" /db_xref="UniProtKB/Swiss-Prot:P77544" /db_xref="EcoGene:EG14109" /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNL FGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG" gene 2290139..2290786 /gene="yfcG" /locus_tag="b2302" /gene_synonym="ECK2296" /gene_synonym="JW2299" /db_xref="EcoGene:EG14110" CDS 2290139..2290786 /gene="yfcG" /locus_tag="b2302" /gene_synonym="ECK2296" /gene_synonym="JW2299" /note="putative S-transferase" /codon_start=1 /transl_table=11 /product="GSH-dependent disulfide bond oxidoreductase" /protein_id="AAC75362.1" /db_xref="GI:1788640" /db_xref="ASAP:ABE-0007600" /db_xref="UniProtKB/Swiss-Prot:P77526" /db_xref="EcoGene:EG14110" /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF WQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS" gene 2290843..2291205 /gene="folX" /locus_tag="b2303" /gene_synonym="ECK2297" /gene_synonym="JW2300" /db_xref="EcoGene:EG14263" CDS 2290843..2291205 /gene="folX" /locus_tag="b2303" /gene_synonym="ECK2297" /gene_synonym="JW2300" /EC_number="5.-.-.-" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="D-erythro-7,8-dihydroneopterin tri P epimerase" /codon_start=1 /transl_table=11 /product="D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase" /protein_id="AAC75363.1" /db_xref="GI:1788641" /db_xref="ASAP:ABE-0007603" /db_xref="UniProtKB/Swiss-Prot:P0AC19" /db_xref="EcoGene:EG14263" /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK LHALRYADSVSMTLSWQR" gene 2291226..2292119 /gene="yfcH" /locus_tag="b2304" /gene_synonym="ECK2298" /gene_synonym="JW2301" /db_xref="EcoGene:EG14111" CDS 2291226..2292119 /gene="yfcH" /locus_tag="b2304" /gene_synonym="ECK2298" /gene_synonym="JW2301" /function="putative enzyme; Not classified" /note="putative sugar nucleotide epimerase" /codon_start=1 /transl_table=11 /product="putative NAD-dependent nucleotide-sugar epimerase" /protein_id="AAC75364.1" /db_xref="GI:1788642" /db_xref="ASAP:ABE-0007605" /db_xref="UniProtKB/Swiss-Prot:P77775" /db_xref="EcoGene:EG14111" /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL LRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRG PFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL EEAGFAFRWYDLEEALADVVR" gene complement(2292167..2293057) /gene="yfcI" /locus_tag="b2305" /gene_synonym="ECK2299" /gene_synonym="JW2302" /db_xref="EcoGene:EG14112" CDS complement(2292167..2293057) /gene="yfcI" /locus_tag="b2305" /gene_synonym="ECK2299" /gene_synonym="JW2302" /codon_start=1 /transl_table=11 /product="transposase_31 family protein" /protein_id="AAC75365.1" /db_xref="GI:1788643" /db_xref="ASAP:ABE-0007607" /db_xref="UniProtKB/Swiss-Prot:P77768" /db_xref="EcoGene:EG14112" /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA MQNHLDAGYKELPLVLPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQ TGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLDRGLD RELVMMVTRLSPDDLIAQSH" gene complement(2293254..2294027) /gene="hisP" /locus_tag="b2306" /gene_synonym="ECK2300" /gene_synonym="JW2303" /db_xref="EcoGene:EG10452" CDS complement(2293254..2294027) /gene="hisP" /locus_tag="b2306" /gene_synonym="ECK2300" /gene_synonym="JW2303" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of histidine transport; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0000105 - histidine biosynthetic process; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="histidine ABC transporter ATPase" /protein_id="AAC75366.1" /db_xref="GI:1788644" /db_xref="ASAP:ABE-0007610" /db_xref="UniProtKB/Swiss-Prot:P07109" /db_xref="EcoGene:EG10452" /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQRFLKGSLK" gene complement(2294035..2294751) /gene="hisM" /locus_tag="b2307" /gene_synonym="ECK2301" /gene_synonym="JW2304" /db_xref="EcoGene:EG10007" CDS complement(2294035..2294751) /gene="hisM" /locus_tag="b2307" /gene_synonym="ECK2301" /gene_synonym="JW2304" /function="transport; Transport of small molecules: Amino acids, amines" /note="histidine transport, membrane protein M; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="histidine ABC transporter permease" /protein_id="AAC75367.1" /db_xref="GI:1788645" /db_xref="ASAP:ABE-0007613" /db_xref="UniProtKB/Swiss-Prot:P0AEU3" /db_xref="EcoGene:EG10007" /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGL NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIAL PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI SLFRRAEKRWLQHVKPSSTH" gene complement(2294748..2295434) /gene="hisQ" /locus_tag="b2308" /gene_synonym="ECK2302" /gene_synonym="JW2305" /db_xref="EcoGene:EG12125" CDS complement(2294748..2295434) /gene="hisQ" /locus_tag="b2308" /gene_synonym="ECK2302" /gene_synonym="JW2305" /function="transport; Transport of small molecules: Amino acids, amines" /note="histidine transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="histidine ABC transporter permease" /protein_id="AAC75368.1" /db_xref="GI:1788646" /db_xref="ASAP:ABE-0007615" /db_xref="UniProtKB/Swiss-Prot:P52094" /db_xref="EcoGene:EG12125" /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL SGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQV ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR YSVGVKRADL" gene complement(2295524..2296306) /gene="hisJ" /locus_tag="b2309" /gene_synonym="ECK2303" /gene_synonym="JW2306" /db_xref="EcoGene:EG12124" CDS complement(2295524..2296306) /gene="hisJ" /locus_tag="b2309" /gene_synonym="ECK2303" /gene_synonym="JW2306" /function="transport; Transport of small molecules: Amino acids, amines" /note="histidine-binding periplasmic protein of high-affinity histidine transport system; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0000105 - histidine biosynthetic process" /codon_start=1 /transl_table=11 /product="histidine ABC transporter periplasmic binding protein" /protein_id="AAC75369.1" /db_xref="GI:1788648" /db_xref="ASAP:ABE-0007617" /db_xref="UniProtKB/Swiss-Prot:P0AEU0" /db_xref="EcoGene:EG12124" /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG" gene complement(2296527..2297309) /gene="argT" /locus_tag="b2310" /gene_synonym="ECK2304" /gene_synonym="JW2307" /db_xref="EcoGene:EG10072" CDS complement(2296527..2297309) /gene="argT" /locus_tag="b2310" /gene_synonym="ECK2304" /gene_synonym="JW2307" /function="transport; Transport of small molecules: Amino acids, amines" /note="lysine-, arginine-, ornithine-binding periplasmic protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_function: GO:0015597 - histidine/arginine/lysine/ornithine porter activity; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="lysine/arginine/ornithine transporter subunit" /protein_id="AAC75370.1" /db_xref="GI:1788649" /db_xref="ASAP:ABE-0007621" /db_xref="UniProtKB/Swiss-Prot:P09551" /db_xref="EcoGene:EG10072" /translation="MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDA KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD" gene complement(2297575..2298144) /gene="ubiX" /locus_tag="b2311" /gene_synonym="dedF" /gene_synonym="ECK2305" /gene_synonym="JW2308" /db_xref="EcoGene:EG11044" CDS complement(2297575..2298144) /gene="ubiX" /locus_tag="b2311" /gene_synonym="dedF" /gene_synonym="ECK2305" /gene_synonym="JW2308" /EC_number="4.1.1.-" /function="putative enzyme; Not classified" /note="GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" /protein_id="AAC75371.1" /db_xref="GI:1788650" /db_xref="ASAP:ABE-0007628" /db_xref="UniProtKB/Swiss-Prot:P0AG03" /db_xref="EcoGene:EG11044" /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL SLETDFSLREVQALADVTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD DVINQTVNRVLDQFAITLPEDLFARWQGA" gene complement(2298239..2299756) /gene="purF" /locus_tag="b2312" /gene_synonym="ade" /gene_synonym="ECK2306" /gene_synonym="JW2309" /gene_synonym="purC" /db_xref="EcoGene:EG10794" CDS complement(2298239..2299756) /gene="purF" /locus_tag="b2312" /gene_synonym="ade" /gene_synonym="ECK2306" /gene_synonym="JW2309" /gene_synonym="purC" /EC_number="2.4.2.14" /function="enzyme; Purine ribonucleotide biosynthesis" /note="amidophosphoribosyltransferase = PRPP amidotransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="AAC75372.1" /db_xref="GI:1788651" /db_xref="ASAP:ABE-0007631" /db_xref="UniProtKB/Swiss-Prot:P0AG16" /db_xref="EcoGene:EG10794" /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE NPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG" gene complement(2299793..2300281) /gene="cvpA" /locus_tag="b2313" /gene_synonym="dedE" /gene_synonym="ECK2307" /gene_synonym="JW2310" /db_xref="EcoGene:EG10169" CDS complement(2299793..2300281) /gene="cvpA" /locus_tag="b2313" /gene_synonym="dedE" /gene_synonym="ECK2307" /gene_synonym="JW2310" /function="membrane; Colicin-related functions" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="colicin V production protein" /protein_id="AAC75373.1" /db_xref="GI:1788652" /db_xref="ASAP:ABE-0007633" /db_xref="UniProtKB/Swiss-Prot:P08550" /db_xref="EcoGene:EG10169" /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLP RA" repeat_region 2300447..2300530 /note="REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2300540..2301202) /gene="dedD" /locus_tag="b2314" /gene_synonym="ECK2308" /gene_synonym="JW5378" /db_xref="EcoGene:EG10218" CDS complement(2300540..2301202) /gene="dedD" /locus_tag="b2314" /gene_synonym="ECK2308" /gene_synonym="JW5378" /function="putative membrane; Not classified" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="membrane-anchored periplasmic protein involved in septation" /protein_id="AAC75374.2" /db_xref="GI:87082083" /db_xref="ASAP:ABE-0007643" /db_xref="UniProtKB/Swiss-Prot:P09549" /db_xref="EcoGene:EG10218" /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT PN" gene complement(2301192..2302460) /gene="folC" /locus_tag="b2315" /gene_synonym="dedC" /gene_synonym="ECK2309" /gene_synonym="JW2312" /db_xref="EcoGene:EG10327" CDS complement(2301192..2302460) /gene="folC" /locus_tag="b2315" /gene_synonym="dedC" /gene_synonym="ECK2309" /gene_synonym="JW2312" /EC_number="6.3.2.12" /EC_number="6.3.2.17" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 3040739" /note="dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="bifunctional folylpolyglutamate synthase/ dihydrofolate synthase" /protein_id="AAC75375.1" /db_xref="GI:1788654" /db_xref="ASAP:ABE-0007645" /db_xref="UniProtKB/Swiss-Prot:P08192" /db_xref="EcoGene:EG10327" /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSLVAARLGV LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGA LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA KAEDTVLVCGSFHTVAHVMEVIDARRSGGK" gene complement(2302530..2303444) /gene="accD" /locus_tag="b2316" /gene_synonym="dedB" /gene_synonym="ECK2310" /gene_synonym="JW2313" /gene_synonym="usg" /db_xref="EcoGene:EG10217" CDS complement(2302530..2303444) /gene="accD" /locus_tag="b2316" /gene_synonym="dedB" /gene_synonym="ECK2310" /gene_synonym="JW2313" /gene_synonym="usg" /EC_number="6.4.1.2" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="acetylCoA carboxylase, carboxytransferase component, beta subunit; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, beta (carboxyltransferase) subunit" /protein_id="AAC75376.1" /db_xref="GI:1788655" /db_xref="ASAP:ABE-0007648" /db_xref="UniProtKB/Swiss-Prot:P0A9Q5" /db_xref="EcoGene:EG10217" /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE VCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI AEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK LMNLPAPNPEAPREGVVVPPVPDQEPEA" gene complement(2303600..2304259) /gene="dedA" /locus_tag="b2317" /gene_synonym="ECK2311" /gene_synonym="JW2314" /db_xref="EcoGene:EG10216" CDS complement(2303600..2304259) /gene="dedA" /locus_tag="b2317" /gene_synonym="ECK2311" /gene_synonym="JW2314" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DedA family inner membrane protein" /protein_id="AAC75377.1" /db_xref="GI:1788656" /db_xref="ASAP:ABE-0007653" /db_xref="UniProtKB/Swiss-Prot:P0ABP6" /db_xref="EcoGene:EG10216" /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFS NPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN VIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAA K" gene complement(2304342..2305154) /gene="truA" /locus_tag="b2318" /gene_synonym="asuC" /gene_synonym="ECK2312" /gene_synonym="hisT" /gene_synonym="JW2315" /gene_synonym="leuK" /db_xref="EcoGene:EG10454" CDS complement(2304342..2305154) /gene="truA" /locus_tag="b2318" /gene_synonym="asuC" /gene_synonym="ECK2312" /gene_synonym="hisT" /gene_synonym="JW2315" /gene_synonym="leuK" /EC_number="4.2.1.70" /function="enzyme; tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine(38-40) synthase" /protein_id="AAC75378.1" /db_xref="GI:1788657" /db_xref="ASAP:ABE-0007657" /db_xref="UniProtKB/Swiss-Prot:P07649" /db_xref="EcoGene:EG10454" /translation="MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS QVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKT VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD" gene complement(2305154..2306167) /gene="usg" /locus_tag="b2319" /gene_synonym="ECK2313" /gene_synonym="JW2316" /db_xref="EcoGene:EG11059" CDS complement(2305154..2306167) /gene="usg" /locus_tag="b2319" /gene_synonym="ECK2313" /gene_synonym="JW2316" /function="putative transport; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 2681152" /note="putative PTS system enzyme II A component" /codon_start=1 /transl_table=11 /product="putative semialdehyde dehydrogenase" /protein_id="AAC75379.1" /db_xref="GI:1788658" /db_xref="ASAP:ABE-0007660" /db_xref="UniProtKB/Swiss-Prot:P08390" /db_xref="EcoGene:EG11059" /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFVQGEDIVLSEE NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE YLY" gene complement(2306233..2307369) /gene="pdxB" /locus_tag="b2320" /gene_synonym="ECK2314" /gene_synonym="JW2317" /db_xref="EcoGene:EG10692" CDS complement(2306233..2307369) /gene="pdxB" /locus_tag="b2320" /gene_synonym="ECK2314" /gene_synonym="JW2317" /EC_number="1.1.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="erythronate-4-phosphate dehyrogenase; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="erythronate-4-phosphate dehydrogenase" /protein_id="AAC75380.1" /db_xref="GI:1788660" /db_xref="ASAP:ABE-0007663" /db_xref="UniProtKB/Swiss-Prot:P05459" /db_xref="EcoGene:EG10692" /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVR SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS LLMLAERDGFSLYDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS LDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL TCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTSHIAGYTLEGKARGTTQVFEAYSK FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR" gene 2307468..2308463 /gene="flk" /locus_tag="b2321" /gene_synonym="div" /gene_synonym="ECK2315" /gene_synonym="JW2318" /gene_synonym="rflH" /db_xref="EcoGene:EG10229" CDS 2307468..2308463 /gene="flk" /locus_tag="b2321" /gene_synonym="div" /gene_synonym="ECK2315" /gene_synonym="JW2318" /gene_synonym="rflH" /function="putative factor; Surface structures" /note="flagellar assembly protein" /codon_start=1 /transl_table=11 /product="putative flagella assembly protein" /protein_id="AAC75381.1" /db_xref="GI:1788661" /db_xref="ASAP:ABE-0007667" /db_xref="UniProtKB/Swiss-Prot:P15286" /db_xref="EcoGene:EG10229" /translation="MIQPISGPPPGQPPGQGDNLPSGTGNQPLSSQQRTSLESLMTKV TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL QARQTLSQQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL NQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR" gene complement(2308460..2309638) /gene="yfcJ" /locus_tag="b2322" /gene_synonym="ECK2316" /gene_synonym="JW2319" /db_xref="EcoGene:EG14113" CDS complement(2308460..2309638) /gene="yfcJ" /locus_tag="b2322" /gene_synonym="ECK2316" /gene_synonym="JW2319" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative arabinose efflux transporter" /protein_id="AAC75382.1" /db_xref="GI:1788662" /db_xref="ASAP:ABE-0007669" /db_xref="UniProtKB/Swiss-Prot:P77549" /db_xref="EcoGene:EG14113" /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH ELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA ILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGA LAVGAPLGLLIHSHYGFAALAITTMVLPVLAWACNGTVRKVPALAGERPSLWSVVGLI WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG " repeat_region 2309861..2309896 /note="REP170 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2309903..2311123) /gene="fabB" /locus_tag="b2323" /gene_synonym="ECK2317" /gene_synonym="fabC" /gene_synonym="JW2320" /db_xref="EcoGene:EG10274" CDS complement(2309903..2311123) /gene="fabB" /locus_tag="b2323" /gene_synonym="ECK2317" /gene_synonym="fabC" /gene_synonym="JW2320" /EC_number="2.3.1.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3076376" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase I" /protein_id="AAC75383.1" /db_xref="GI:1788663" /db_xref="ASAP:ABE-0007675" /db_xref="UniProtKB/Swiss-Prot:P0A953" /db_xref="EcoGene:EG10274" /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF GGTNATLVMRKLKD" gene 2311282..2313288 /gene="mnmC" /locus_tag="b2324" /gene_synonym="ECK2318" /gene_synonym="JW5380" /gene_synonym="trmC" /gene_synonym="yfcK" /db_xref="EcoGene:EG14114" CDS 2311282..2313288 /gene="mnmC" /locus_tag="b2324" /gene_synonym="ECK2318" /gene_synonym="JW5380" /gene_synonym="trmC" /gene_synonym="yfcK" /function="enzyme; tRNA modification" /note="putative peptidase" /codon_start=1 /transl_table=11 /product="fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme" /protein_id="AAC75384.2" /db_xref="GI:87082084" /db_xref="ASAP:ABE-0007681" /db_xref="UniProtKB/Swiss-Prot:P77182" /db_xref="EcoGene:EG14114" /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAS ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG" repeat_region 2313307..2313386 /note="REP171 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2313409..2313687) /gene="yfcL" /locus_tag="b2325" /gene_synonym="ECK2319" /gene_synonym="JW2322" /db_xref="EcoGene:EG14115" CDS complement(2313409..2313687) /gene="yfcL" /locus_tag="b2325" /gene_synonym="ECK2319" /gene_synonym="JW2322" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75385.1" /db_xref="GI:1788665" /db_xref="ASAP:ABE-0007684" /db_xref="UniProtKB/Swiss-Prot:P64540" /db_xref="EcoGene:EG14115" /translation="MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELES GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ" gene complement(2313721..2314269) /gene="epmC" /locus_tag="b2326" /gene_synonym="ECK2320" /gene_synonym="JW5381" /gene_synonym="yfcM" /db_xref="EcoGene:EG14116" CDS complement(2313721..2314269) /gene="epmC" /locus_tag="b2326" /gene_synonym="ECK2320" /gene_synonym="JW5381" /gene_synonym="yfcM" /function="enzyme; Protein modification" /note="putative transporting ATPase" /codon_start=1 /transl_table=11 /product="Elongation Factor P Lys34 hydroxylase" /protein_id="AAC75386.1" /db_xref="GI:1788666" /db_xref="ASAP:ABE-0007686" /db_xref="UniProtKB/Swiss-Prot:P76938" /db_xref="EcoGene:EG14116" /translation="MNSTHHYEQLIEIFNSCFADDFNTRLIKGDDEPIYLPADAEVPY NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA LQNYYHTPELTAEQFPWPEALN" gene complement(2314269..2315078) /gene="yfcA" /locus_tag="b2327" /gene_synonym="ECK2321" /gene_synonym="JW2324" /db_xref="EcoGene:EG11144" CDS complement(2314269..2315078) /gene="yfcA" /locus_tag="b2327" /gene_synonym="ECK2321" /gene_synonym="JW2324" /function="putative structure; Not classified" /note="putative structural protein" /codon_start=1 /transl_table=11 /product="TauE/TSUP family inner membrane protein" /protein_id="AAC75387.1" /db_xref="GI:1788667" /db_xref="ASAP:ABE-0007689" /db_xref="UniProtKB/Swiss-Prot:P0AD30" /db_xref="EcoGene:EG11144" /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQ YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN" gene complement(2315078..2315902) /gene="mepA" /locus_tag="b2328" /gene_synonym="ECK2322" /gene_synonym="JW2325" /db_xref="EcoGene:EG10580" CDS complement(2315078..2315902) /gene="mepA" /locus_tag="b2328" /gene_synonym="ECK2322" /gene_synonym="JW2325" /EC_number="3.4.24.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="murein DD-endopeptidase, penicillin-insensitive; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="murein DD-endopeptidase" /protein_id="AAC75388.1" /db_xref="GI:1788668" /db_xref="ASAP:ABE-0007691" /db_xref="UniProtKB/Swiss-Prot:P0C0T5" /db_xref="EcoGene:EG10580" /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA DSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI" gene complement(2315906..2316991) /gene="aroC" /locus_tag="b2329" /gene_synonym="ECK2323" /gene_synonym="JW2326" /db_xref="EcoGene:EG10075" CDS complement(2315906..2316991) /gene="aroC" /locus_tag="b2329" /gene_synonym="ECK2323" /gene_synonym="JW2326" /EC_number="4.2.3.5" /function="enzyme; Amino acid biosynthesis: Chorismate" /note="GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="AAC75389.1" /db_xref="GI:1788669" /db_xref="ASAP:ABE-0007693" /db_xref="UniProtKB/Swiss-Prot:P12008" /db_xref="EcoGene:EG10075" /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHD LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM GDIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA MLAIVLMDHLLRQRAQNADVKTDIPRW" gene complement(2317026..2317958) /gene="prmB" /locus_tag="b2330" /gene_synonym="ECK2324" /gene_synonym="JW5841" /gene_synonym="yfcB" /db_xref="EcoGene:EG12449" CDS complement(2317026..2317958) /gene="prmB" /locus_tag="b2330" /gene_synonym="ECK2324" /gene_synonym="JW5841" /gene_synonym="yfcB" /EC_number="2.1.1.-" /function="putative enzyme; Not classified" /note="putative adenine-specific methylase" /codon_start=1 /transl_table=11 /product="N5-glutamine methyltransferase" /protein_id="AAC75390.2" /db_xref="GI:87082085" /db_xref="ASAP:ABE-0007695" /db_xref="UniProtKB/Swiss-Prot:P39199" /db_xref="EcoGene:EG12449" /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV PFTWLEFDNGGDGVFMLTKEQLIAAREHFAIYKD" gene 2318124..2318675 /gene="smrB" /locus_tag="b2331" /gene_synonym="ECK2325" /gene_synonym="JW2328" /gene_synonym="yfcN" /db_xref="EcoGene:EG14117" CDS 2318124..2318675 /gene="smrB" /locus_tag="b2331" /gene_synonym="ECK2325" /gene_synonym="JW2328" /gene_synonym="yfcN" /codon_start=1 /transl_table=11 /product="putative DNA endonuclease" /protein_id="AAC75391.1" /db_xref="GI:1788671" /db_xref="ASAP:ABE-0007698" /db_xref="UniProtKB/Swiss-Prot:P0A8B2" /db_xref="EcoGene:EG14117" /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK EYGGDAALLVLIEVEEWLPPELP" gene complement(2318746..2319567) /gene="yfcO" /locus_tag="b2332" /gene_synonym="ECK2326" /gene_synonym="JW2329" /db_xref="EcoGene:EG14118" CDS complement(2318746..2319567) /gene="yfcO" /locus_tag="b2332" /gene_synonym="ECK2326" /gene_synonym="JW2329" /codon_start=1 /transl_table=11 /product="DUF2544 family putative outer membrane protein" /protein_id="AAC75392.2" /db_xref="GI:87082086" /db_xref="ASAP:ABE-0007700" /db_xref="UniProtKB/Swiss-Prot:P76498" /db_xref="EcoGene:EG14118" /translation="MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNL KIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPS GWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQP YDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQM ITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL" gene complement(2319569..2320108) /gene="yfcP" /locus_tag="b2333" /gene_synonym="ECK2327" /gene_synonym="JW2330" /db_xref="EcoGene:EG14119" CDS complement(2319569..2320108) /gene="yfcP" /locus_tag="b2333" /gene_synonym="ECK2327" /gene_synonym="JW2330" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75393.1" /db_xref="GI:1788674" /db_xref="ASAP:ABE-0007702" /db_xref="UniProtKB/Swiss-Prot:P76499" /db_xref="EcoGene:EG14119" /translation="MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCA LVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSE QPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSG RDVTIGEFTASLTATFEYI" gene complement(2320105..2320593) /gene="yfcQ" /locus_tag="b2334" /gene_synonym="ECK2328" /gene_synonym="JW2331" /db_xref="EcoGene:EG14120" CDS complement(2320105..2320593) /gene="yfcQ" /locus_tag="b2334" /gene_synonym="ECK2328" /gene_synonym="JW2331" /function="putative structural component; Surface structures" /note="GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75394.1" /db_xref="GI:1788675" /db_xref="ASAP:ABE-0007705" /db_xref="UniProtKB/Swiss-Prot:P76500" /db_xref="EcoGene:EG14120" /translation="MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIE VEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVP GFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVD YQ" gene complement(2320590..2321102) /gene="yfcR" /locus_tag="b2335" /gene_synonym="ECK2329" /gene_synonym="JW2332" /db_xref="EcoGene:EG14121" CDS complement(2320590..2321102) /gene="yfcR" /locus_tag="b2335" /gene_synonym="ECK2329" /gene_synonym="JW2332" /function="putative structural component; Surface structures" /note="putative fimbrial protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75395.1" /db_xref="GI:1788676" /db_xref="ASAP:ABE-0007707" /db_xref="UniProtKB/Swiss-Prot:P76501" /db_xref="EcoGene:EG14121" /translation="MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAP PPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGET VLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFN ASLTMVVDYQ" gene complement(2321102..2321854) /gene="yfcS" /locus_tag="b2336" /gene_synonym="ECK2330" /gene_synonym="JW2333" /db_xref="EcoGene:EG14122" CDS complement(2321102..2321854) /gene="yfcS" /locus_tag="b2336" /gene_synonym="ECK2330" /gene_synonym="JW2333" /function="putative factor; Surface structures" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC75396.1" /db_xref="GI:1788677" /db_xref="ASAP:ABE-0007709" /db_xref="UniProtKB/Swiss-Prot:P77599" /db_xref="EcoGene:EG14122" /translation="MSDLLCSAKLGAMTLALLLSATSLSALASVTPDRTRLIFNESDK SISVTLRNNDPKLPYLAQSWIEDEKGNKITSPLTVLPPVQRIDSMMNGQVKVQGMPDI NKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALEKVSMKSPWQHKV TLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVPLNVKMDSVPV LTYVNDFGARMPLFFQCNGNSCQVDEEQSRKG" gene complement(2321874..2324519) /gene="yfcU" /locus_tag="b4661" /gene_synonym="ECK2332" /gene_synonym="JW2334" /gene_synonym="yfcT" /pseudo /db_xref="EcoGene:EG14124" CDS complement(2321874..2324519) /gene="yfcU" /locus_tag="b4661" /gene_synonym="ECK2332" /gene_synonym="JW2334" /gene_synonym="yfcT" /note="pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007711" /db_xref="ASAP:ABE-0007713" /db_xref="UniProtKB/Swiss-Prot:P77196" /db_xref="EcoGene:EG14124" gene complement(2324601..2325164) /gene="yfcV" /locus_tag="b2339" /gene_synonym="ECK2333" /gene_synonym="JW2336" /db_xref="EcoGene:EG14125" CDS complement(2324601..2325164) /gene="yfcV" /locus_tag="b2339" /gene_synonym="ECK2333" /gene_synonym="JW2336" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC75399.1" /db_xref="GI:1788680" /db_xref="ASAP:ABE-0007715" /db_xref="UniProtKB/Swiss-Prot:P77288" /db_xref="EcoGene:EG14125" /translation="MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCS IVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSAN SGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNF KAWLVGAADAPDLGNFEANTTFQITYL" gene complement(2325845..2326330) /gene="sixA" /locus_tag="b2340" /gene_synonym="ECK2334" /gene_synonym="JW2337" /gene_synonym="yfcW" /db_xref="EcoGene:EG14126" CDS complement(2325845..2326330) /gene="sixA" /locus_tag="b2340" /gene_synonym="ECK2334" /gene_synonym="JW2337" /gene_synonym="yfcW" /EC_number="3.1.3.-" /note="GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="phosphohistidine phosphatase" /protein_id="AAC75400.1" /db_xref="GI:1788681" /db_xref="ASAP:ABE-0007720" /db_xref="UniProtKB/Swiss-Prot:P76502" /db_xref="EcoGene:EG14126" /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA I" gene complement(2326533..2328677) /gene="fadJ" /locus_tag="b2341" /gene_synonym="ECK2335" /gene_synonym="JW2338" /gene_synonym="yfcX" /db_xref="EcoGene:EG14127" CDS complement(2326533..2328677) /gene="fadJ" /locus_tag="b2341" /gene_synonym="ECK2335" /gene_synonym="JW2338" /gene_synonym="yfcX" /EC_number="1.1.1.35" /EC_number="4.2.1.17" /EC_number="5.1.2.3" /EC_number="5.3.3.8" /function="putative enzyme; Not classified" /note="putative enzyme; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase" /protein_id="AAC75401.1" /db_xref="GI:1788682" /db_xref="ASAP:ABE-0007723" /db_xref="UniProtKB/Swiss-Prot:P77399" /db_xref="EcoGene:EG14127" /translation="MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIK QLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI QVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG VSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKERPSSRPLPVRERI LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIP VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR MLTQGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRISAPQVAERCVM LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA TQYGSRFTPCERLVEMGARGESFWKTTATDLQ" gene complement(2328677..2329987) /gene="fadI" /locus_tag="b2342" /gene_synonym="ECK2336" /gene_synonym="JW2339" /gene_synonym="yfcY" /db_xref="EcoGene:EG14128" CDS complement(2328677..2329987) /gene="fadI" /locus_tag="b2342" /gene_synonym="ECK2336" /gene_synonym="JW2339" /gene_synonym="yfcY" /EC_number="2.3.1.16" /function="putative enzyme; Not classified" /note="putative acyltransferase" /codon_start=1 /transl_table=11 /product="beta-ketoacyl-CoA thiolase, anaerobic, subunit" /protein_id="AAC75402.1" /db_xref="GI:1788683" /db_xref="ASAP:ABE-0007725" /db_xref="UniProtKB/Swiss-Prot:P76503" /db_xref="EcoGene:EG14128" /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM SDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGH PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE" gene complement(2330168..2330452) /gene="yfcZ" /locus_tag="b2343" /gene_synonym="ECK2337" /gene_synonym="JW2340" /db_xref="EcoGene:EG14129" CDS complement(2330168..2330452) /gene="yfcZ" /locus_tag="b2343" /gene_synonym="ECK2337" /gene_synonym="JW2340" /codon_start=1 /transl_table=11 /product="UPF0381 family protein" /protein_id="AAC75403.2" /db_xref="GI:87082087" /db_xref="ASAP:ABE-0007731" /db_xref="UniProtKB/Swiss-Prot:P0AD33" /db_xref="EcoGene:EG14129" /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL AALTEKARSVESEPCKITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR" gene 2330824..2332164 /gene="fadL" /locus_tag="b2344" /gene_synonym="ECK2338" /gene_synonym="JW2341" /gene_synonym="ttr" /db_xref="EcoGene:EG10280" CDS 2330824..2332164 /gene="fadL" /locus_tag="b2344" /gene_synonym="ECK2338" /gene_synonym="JW2341" /gene_synonym="ttr" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="long-chain fatty acid transport protein (outer membrane flp protein); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="long-chain fatty acid outer membrane transporter" /protein_id="AAC75404.2" /db_xref="GI:145693163" /db_xref="ASAP:ABE-0007740" /db_xref="UniProtKB/Swiss-Prot:P10384" /db_xref="EcoGene:EG10280" /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDS NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST SGDTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF" gene 2332530..2333588 /gene="yfdF" /locus_tag="b2345" /gene_synonym="ECK2339" /gene_synonym="JW2342" /db_xref="EcoGene:EG14130" CDS 2332530..2333588 /gene="yfdF" /locus_tag="b2345" /gene_synonym="ECK2339" /gene_synonym="JW2342" /note="GO_process: GO:0006259 - DNA metabolic process" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75405.1" /db_xref="GI:1788687" /db_xref="ASAP:ABE-0007743" /db_xref="UniProtKB/Swiss-Prot:P76505" /db_xref="EcoGene:EG14130" /translation="MLPSISINNTSAAYPESINENNNDEVNGLVQEFKNLFNGKEGIS TCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIDSNDTDHITIGIDNQEPIELPAN YKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEF DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGD SLTQYCSENARSASAWFESSKAIMAESFATGSDHQVVNELNGERLREPNDVFKRYGRA IRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDLEGKIEERLQNRQAE YQNEINQPSAPGVNFDDI" gene complement(2333770..2334525) /gene="mlaA" /locus_tag="b2346" /gene_synonym="ECK2340" /gene_synonym="JW2343" /gene_synonym="vacJ" /db_xref="EcoGene:EG14276" CDS complement(2333770..2334525) /gene="mlaA" /locus_tag="b2346" /gene_synonym="ECK2340" /gene_synonym="JW2343" /gene_synonym="vacJ" /function="transport; Transport of small molecules: phospholipids; Macromolecule synthesis, modification: Lipoprotein" /note="lipoprotein precursor; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component" /protein_id="AAC75406.1" /db_xref="GI:1788688" /db_xref="ASAP:ABE-0007745" /db_xref="UniProtKB/Swiss-Prot:P76506" /db_xref="EcoGene:EG14276" /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD DGGDMADGFYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE" gene 2334819..2335751 /gene="yfdC" /locus_tag="b2347" /gene_synonym="ECK2341" /gene_synonym="JW2344" /db_xref="EcoGene:EG12420" CDS 2334819..2335751 /gene="yfdC" /locus_tag="b2347" /gene_synonym="ECK2341" /gene_synonym="JW2344" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative inner membrane protein" /protein_id="AAC75407.1" /db_xref="GI:1788689" /db_xref="ASAP:ABE-0007751" /db_xref="UniProtKB/Swiss-Prot:P37327" /db_xref="EcoGene:EG12420" /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGF IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEY MPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS HAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA" gene 2335827..2335901 /gene="argW" /locus_tag="b2348" /gene_synonym="ECK2342" /gene_synonym="JWR0044" /db_xref="EcoGene:EG30016" tRNA 2335827..2335901 /gene="argW" /locus_tag="b2348" /gene_synonym="ECK2342" /gene_synonym="JWR0044" /product="tRNA-Arg" /note="anticodon: CCU" /db_xref="ASAP:ABE-0007753" /db_xref="EcoGene:EG30016" misc_feature 2335903..2346117 /note="cryptic prophage CPS-53" gene 2336063..2337220 /gene="intS" /locus_tag="b2349" /gene_synonym="ECK2343" /gene_synonym="intC" /gene_synonym="JW2345" /gene_synonym="yfdB" /db_xref="EcoGene:EG12413" CDS 2336063..2337220 /gene="intS" /locus_tag="b2349" /gene_synonym="ECK2343" /gene_synonym="intC" /gene_synonym="JW2345" /gene_synonym="yfdB" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase" /protein_id="AAC75408.1" /db_xref="GI:1788690" /db_xref="ASAP:ABE-0007756" /db_xref="UniProtKB/Swiss-Prot:P37326" /db_xref="EcoGene:EG12413" /translation="MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKID GKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYE HKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKA RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGS IVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVE LLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIM NEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE" gene 2337373..2337735 /gene="gtrA" /locus_tag="b2350" /gene_synonym="ECK2344" /gene_synonym="JW2346" /gene_synonym="yfdG" /db_xref="EcoGene:EG14131" CDS 2337373..2337735 /gene="gtrA" /locus_tag="b2350" /gene_synonym="ECK2344" /gene_synonym="JW2346" /gene_synonym="yfdG" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase/flippase" /protein_id="AAC75409.1" /db_xref="GI:1788691" /db_xref="ASAP:ABE-0007761" /db_xref="UniProtKB/Swiss-Prot:P77682" /db_xref="EcoGene:EG14131" /translation="MLKLFAKYTSIGVLNTLIHWVVFGVCIYVAHTNQALANFAGFVV AVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWAADRCALPPMITLVTFSAI SLVCGFVYSKFIVFRDAK" gene 2337732..2338652 /gene="gtrB" /locus_tag="b2351" /gene_synonym="ECK2345" /gene_synonym="JW2347" /gene_synonym="yfdH" /db_xref="EcoGene:EG14132" CDS 2337732..2338652 /gene="gtrB" /locus_tag="b2351" /gene_synonym="ECK2345" /gene_synonym="JW2347" /gene_synonym="yfdH" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase" /protein_id="AAC75410.1" /db_xref="GI:1788692" /db_xref="ASAP:ABE-0007763" /db_xref="UniProtKB/Swiss-Prot:P77293" /db_xref="EcoGene:EG14132" /translation="MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSK DATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVI PHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMS RDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGI TSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQM IGIGVLGEYIGRTYIETKKRPKYIIKRVKK" gene 2338649..2339980 /gene="gtrS" /locus_tag="b2352" /gene_synonym="ECK2346" /gene_synonym="gtrIV" /gene_synonym="JW5382" /gene_synonym="yfdI" /db_xref="EcoGene:EG14133" CDS 2338649..2339980 /gene="gtrS" /locus_tag="b2352" /gene_synonym="ECK2346" /gene_synonym="gtrIV" /gene_synonym="JW5382" /gene_synonym="yfdI" /function="Phage or Prophage Related" /note="putative ligase" /codon_start=1 /transl_table=11 /product="serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage" /protein_id="AAC75411.1" /db_xref="GI:1788693" /db_xref="ASAP:ABE-0007765" /db_xref="UniProtKB/Swiss-Prot:P76507" /db_xref="EcoGene:EG14133" /translation="MNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIP AFTYDLPLLYKLKGHIDSIDSYEYISSYSYILYTYVLFISIFTEYLDARVLSLFLKVI YIYSLYAIFTSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQEQIVIIFLPFLVY SLTCKNNKSMLLLFFSLLIISTAKNQFILTPLIVYSYYIFFDRHKLIIKSVICVVCLL ASIFAISYSKGVVELNKYHATYFGSYLYMKNNGYKMPSYVDDKCVGLDAWGNKFDISF GATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKLPFDDGVMSQYKENYFHVYKKL HVIYGESNILTTITNIKDNIFKNIRFISLLLFFIASIFIRNNKIKASLFVVSLFGISQ FYVSFFGEGYRDLSKHLFGMYFSFDLCLYITVVFLIYKIIQRNQDNSDVKH" gene 2340333..2340623 /gene="tfaS" /locus_tag="b2353" /gene_synonym="ECK2347" /gene_synonym="JW5383" /gene_synonym="yfdJ" /pseudo /db_xref="EcoGene:EG14134" CDS 2340333..2340623 /gene="tfaS" /locus_tag="b2353" /gene_synonym="ECK2347" /gene_synonym="JW5383" /gene_synonym="yfdJ" /note="pseudogene, CPS-53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007768" /db_xref="UniProtKB/Swiss-Prot:P77326" /db_xref="EcoGene:EG14134" gene complement(2340595..2341035) /gene="yfdK" /locus_tag="b2354" /gene_synonym="ECK2348" /gene_synonym="JW2350" /db_xref="EcoGene:EG14135" CDS complement(2340595..2341035) /gene="yfdK" /locus_tag="b2354" /gene_synonym="ECK2348" /gene_synonym="JW2350" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; conserved protein" /protein_id="AAC75413.1" /db_xref="GI:1788696" /db_xref="ASAP:ABE-0007770" /db_xref="UniProtKB/Swiss-Prot:P77656" /db_xref="EcoGene:EG14135" /translation="MNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSG LPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAA IGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR" gene complement(2341062..2341640) /gene="yfdL" /locus_tag="b2355" /gene_synonym="ECK2349" /gene_synonym="JW5384" /pseudo /db_xref="EcoGene:EG14136" CDS complement(2341062..2341640) /gene="yfdL" /locus_tag="b2355" /gene_synonym="ECK2349" /gene_synonym="JW5384" /note="pseudogene, CPS-53 (KpLE1) prophage;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007773" /db_xref="UniProtKB/Swiss-Prot:P76508" /db_xref="EcoGene:EG14136" gene complement(2341636..2341905) /gene="yfdM" /locus_tag="b2356" /gene_synonym="ECK2350" /gene_synonym="JW2352" /gene_synonym="yzyB" /pseudo /db_xref="EcoGene:EG12950" CDS complement(2341636..2341905) /gene="yfdM" /locus_tag="b2356" /gene_synonym="ECK2350" /gene_synonym="JW2352" /gene_synonym="yzyB" /note="CPS-53 (KpLE1) prophage; putative methyltransferase;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007775" /db_xref="UniProtKB/Swiss-Prot:P76509" /db_xref="EcoGene:EG12950" gene complement(2341905..2342399) /gene="yfdN" /locus_tag="b2357" /gene_synonym="ECK2351" /gene_synonym="JW5385" /gene_synonym="yzyA" /db_xref="EcoGene:EG12949" CDS complement(2341905..2342399) /gene="yfdN" /locus_tag="b2357" /gene_synonym="ECK2351" /gene_synonym="JW5385" /gene_synonym="yzyA" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; uncharacterized protein" /protein_id="AAC75416.1" /db_xref="GI:1788699" /db_xref="ASAP:ABE-0007777" /db_xref="UniProtKB/Swiss-Prot:P76510" /db_xref="EcoGene:EG12949" /translation="MSMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLR QSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQA EELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGN YVGA" gene complement(2342396..2343103) /gene="oweS" /locus_tag="b2358" /gene_synonym="ECK2352" /gene_synonym="JW2355" /gene_synonym="yfdO" /pseudo /db_xref="EcoGene:EG14137" CDS complement(2342396..2343103) /gene="oweS" /locus_tag="b2358" /gene_synonym="ECK2352" /gene_synonym="JW2355" /gene_synonym="yfdO" /note="pseudogene, CPS-53 (KpLE1) prophage; bacteriophage replication protein O family;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0007779" /db_xref="UniProtKB/Swiss-Prot:P0AD35" /db_xref="EcoGene:EG14137" gene 2343122..2343484 /gene="yfdP" /locus_tag="b2359" /gene_synonym="ECK2353" /gene_synonym="JW2356" /db_xref="EcoGene:EG14138" CDS 2343122..2343484 /gene="yfdP" /locus_tag="b2359" /gene_synonym="ECK2353" /gene_synonym="JW2356" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; uncharacterized protein" /protein_id="AAC75418.2" /db_xref="GI:145693164" /db_xref="ASAP:ABE-0007785" /db_xref="UniProtKB/Swiss-Prot:P76512" /db_xref="EcoGene:EG14138" /translation="MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGK VSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQG QLLTLAGEPDGKLRAAGH" gene 2343550..2344374 /gene="yfdQ" /locus_tag="b2360" /gene_synonym="ECK2354" /gene_synonym="JW2357" /db_xref="EcoGene:EG14139" CDS 2343550..2344374 /gene="yfdQ" /locus_tag="b2360" /gene_synonym="ECK2354" /gene_synonym="JW2357" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; uncharacterized protein" /protein_id="AAC75419.1" /db_xref="GI:1788702" /db_xref="ASAP:ABE-0007788" /db_xref="UniProtKB/Swiss-Prot:P76513" /db_xref="EcoGene:EG14139" /translation="MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHD LEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEP GHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATK AAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKER PFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA" gene 2344502..2345038 /gene="yfdR" /locus_tag="b2361" /gene_synonym="ECK2355" /gene_synonym="JW2358" /db_xref="EcoGene:EG14140" CDS 2344502..2345038 /gene="yfdR" /locus_tag="b2361" /gene_synonym="ECK2355" /gene_synonym="JW2358" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; conserved protein" /protein_id="AAC75420.2" /db_xref="GI:87082090" /db_xref="ASAP:ABE-0007791" /db_xref="UniProtKB/Swiss-Prot:P76514" /db_xref="EcoGene:EG14140" /translation="MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHF YSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIR EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHA YGMFMERFNDLSELRKCA" gene 2345029..2345391 /gene="yfdS" /locus_tag="b2362" /gene_synonym="ECK2356" /gene_synonym="JW2359" /db_xref="EcoGene:EG14141" CDS 2345029..2345391 /gene="yfdS" /locus_tag="b2362" /gene_synonym="ECK2356" /gene_synonym="JW2359" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; uncharacterized protein" /protein_id="AAC75421.1" /db_xref="GI:1788704" /db_xref="ASAP:ABE-0007793" /db_xref="UniProtKB/Swiss-Prot:P76515" /db_xref="EcoGene:EG14141" /translation="MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAA LENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLE NVNITHWAVMPKAPEAGA" gene 2345391..2345696 /gene="yfdT" /locus_tag="b2363" /gene_synonym="ECK2357" /gene_synonym="JW5887" /db_xref="EcoGene:EG14142" CDS 2345391..2345696 /gene="yfdT" /locus_tag="b2363" /gene_synonym="ECK2357" /gene_synonym="JW5887" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CPS-53 (KpLE1) prophage; uncharacterized protein" /protein_id="AAC75422.1" /db_xref="GI:1788705" /db_xref="ASAP:ABE-0007795" /db_xref="UniProtKB/Swiss-Prot:P76516" /db_xref="EcoGene:EG14142" /translation="MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDE REAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK" gene 2345699..2345749 /gene="ypdJ" /locus_tag="b4545" /gene_synonym="ECK2358" /gene_synonym="JW5386" /pseudo /db_xref="EcoGene:EG14428" CDS 2345699..2345749 /gene="ypdJ" /locus_tag="b4545" /gene_synonym="ECK2358" /gene_synonym="JW5386" /note="exisonase remnant" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285066" /db_xref="UniProtKB/Swiss-Prot:Q2EET0" /db_xref="EcoGene:EG14428" gene 2345828..2346028 /gene="torI" /locus_tag="b4501" /gene_synonym="ECK2359" /gene_synonym="JW5387" /db_xref="EcoGene:EG14411" CDS 2345828..2346028 /gene="torI" /locus_tag="b4501" /gene_synonym="ECK2359" /gene_synonym="JW5387" /codon_start=1 /transl_table=11 /product="response regulator inhibitor for tor operon" /protein_id="ABD18695.1" /db_xref="GI:87082092" /db_xref="ASAP:ABE-0269710" /db_xref="UniProtKB/Swiss-Prot:Q2EES9" /db_xref="EcoGene:EG14411" /translation="MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHG RARWLYRDHCEFKNKLLSRANG" gene 2346102..2346116 /gene="pawZ" /locus_tag="b4643" /gene_synonym="ECK4464" /pseudo /db_xref="EcoGene:EG31173" tRNA 2346102..2346116 /gene="pawZ" /locus_tag="b4643" /gene_synonym="ECK4464" /product="tRNA-OTHER" /pseudo /db_xref="EcoGene:EG31173" gene complement(2346212..2347147) /gene="dsdC" /locus_tag="b2364" /gene_synonym="ECK2360" /gene_synonym="JW2361" /db_xref="EcoGene:EG13161" CDS complement(2346212..2347147) /gene="dsdC" /locus_tag="b2364" /gene_synonym="ECK2360" /gene_synonym="JW2361" /function="regulator; Degradation of small molecules: Amino acids" /note="D-serine dehydratase (deaminase) transcriptional activator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="dsd operon activator; autorepressor" /protein_id="AAC75423.1" /db_xref="GI:1788706" /db_xref="ASAP:ABE-0007797" /db_xref="UniProtKB/Swiss-Prot:P46068" /db_xref="EcoGene:EG13161" /translation="MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPS AVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELS GTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAP SAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHS WAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMT VKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS" gene 2347365..2348702 /gene="dsdX" /locus_tag="b2365" /gene_synonym="dsdC" /gene_synonym="ECK2361" /gene_synonym="JW2362" /gene_synonym="yfdA" /gene_synonym="yfdD" /db_xref="EcoGene:EG10250" CDS 2347365..2348702 /gene="dsdX" /locus_tag="b2365" /gene_synonym="dsdC" /gene_synonym="ECK2361" /gene_synonym="JW2362" /gene_synonym="yfdA" /gene_synonym="yfdD" /function="transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="D-serine transporter" /protein_id="AAC75424.1" /db_xref="GI:1788707" /db_xref="ASAP:ABE-0007801" /db_xref="UniProtKB/Swiss-Prot:P08555" /db_xref="EcoGene:EG10250" /translation="MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMM GMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVD VIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP HPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLK VRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAV FVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVI LSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGS GAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII" gene 2348720..2350048 /gene="dsdA" /locus_tag="b2366" /gene_synonym="ECK2362" /gene_synonym="JW2363" /db_xref="EcoGene:EG10249" CDS 2348720..2350048 /gene="dsdA" /locus_tag="b2366" /gene_synonym="ECK2362" /gene_synonym="JW2363" /EC_number="4.3.1.18" /function="enzyme; Degradation of small molecules: Amino acids" /experiment="N-terminus verified by Edman degradation: PMID 795658,9222324" /note="D-serine dehydratase (deaminase); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="D-serine dehydratase" /protein_id="AAC75425.1" /db_xref="GI:1788708" /db_xref="ASAP:ABE-0007804" /db_xref="UniProtKB/Swiss-Prot:P00926" /db_xref="EcoGene:EG10249" /translation="MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGL TEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQ LLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGV AVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYL PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL TAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMA GPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR" gene complement(2350156..2351694) /gene="emrY" /locus_tag="b2367" /gene_synonym="ECK2363" /gene_synonym="JW2364" /db_xref="EcoGene:EG13283" CDS complement(2350156..2351694) /gene="emrY" /locus_tag="b2367" /gene_synonym="ECK2363" /gene_synonym="JW2364" /function="putative transport; Drug/analog sensitivity" /note="multidrug resistance protein Y; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="putative multidrug efflux system" /protein_id="AAC75426.1" /db_xref="GI:1788710" /db_xref="ASAP:ABE-0007806" /db_xref="UniProtKB/Swiss-Prot:P52600" /db_xref="EcoGene:EG13283" /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA KGVG" gene complement(2351694..2352857) /gene="emrK" /locus_tag="b2368" /gene_synonym="ECK2364" /gene_synonym="JW2365" /db_xref="EcoGene:EG13282" CDS complement(2351694..2352857) /gene="emrK" /locus_tag="b2368" /gene_synonym="ECK2364" /gene_synonym="JW2365" /function="putative transport; Drug/analog sensitivity" /note="multidrug resistance protein K; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux pump membrane fusion protein" /protein_id="AAC75427.1" /db_xref="GI:1788711" /db_xref="ASAP:ABE-0007808" /db_xref="UniProtKB/Swiss-Prot:P52599" /db_xref="EcoGene:EG13282" /translation="MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMIS TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL" gene 2353273..2353887 /gene="evgA" /locus_tag="b2369" /gene_synonym="ECK2365" /gene_synonym="JW2366" /db_xref="EcoGene:EG11609" CDS 2353273..2353887 /gene="evgA" /locus_tag="b2369" /gene_synonym="ECK2365" /gene_synonym="JW2366" /function="putative regulator; Not classified" /note="putative positive transcription regulator (sensor EvgS); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with EvgS" /protein_id="AAC75428.1" /db_xref="GI:1788712" /db_xref="ASAP:ABE-0007817" /db_xref="UniProtKB/Swiss-Prot:P0ACZ4" /db_xref="EcoGene:EG11609" /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG" gene 2353892..2357485 /gene="evgS" /locus_tag="b2370" /gene_synonym="ECK2366" /gene_synonym="JW2367" /db_xref="EcoGene:EG11610" CDS 2353892..2357485 /gene="evgS" /locus_tag="b2370" /gene_synonym="ECK2366" /gene_synonym="JW2367" /function="putative regulator; Not classified" /note="putative sensor for regulator EvgA; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hybrid sensory histidine kinase in two-component regulatory system with EvgA" /protein_id="AAC75429.1" /db_xref="GI:1788713" /db_xref="ASAP:ABE-0007819" /db_xref="UniProtKB/Swiss-Prot:P30855" /db_xref="EcoGene:EG11610" /translation="MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRL SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE YADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLT SPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSS MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWL DTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNI ITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVF VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELD ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYI CGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGS GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS FGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLG HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRL LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI EALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND" gene complement(2357541..2358686) /gene="yfdE" /locus_tag="b2371" /gene_synonym="ECK2367" /gene_synonym="JW2368" /db_xref="EcoGene:EG13284" CDS complement(2357541..2358686) /gene="yfdE" /locus_tag="b2371" /gene_synonym="ECK2367" /gene_synonym="JW2368" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="acetyl-CoA:oxalate CoA-transferase" /protein_id="AAC75430.2" /db_xref="GI:87082093" /db_xref="ASAP:ABE-0007821" /db_xref="UniProtKB/Swiss-Prot:P76518" /db_xref="EcoGene:EG13284" /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFR PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS" gene complement(2358760..2359704) /gene="yfdV" /locus_tag="b2372" /gene_synonym="ECK2368" /gene_synonym="JW2369" /db_xref="EcoGene:EG14144" CDS complement(2358760..2359704) /gene="yfdV" /locus_tag="b2372" /gene_synonym="ECK2368" /gene_synonym="JW2369" /function="putative factor; Not classified" /note="putative receptor protein" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC75431.1" /db_xref="GI:1788715" /db_xref="ASAP:ABE-0007824" /db_xref="UniProtKB/Swiss-Prot:P0AA49" /db_xref="EcoGene:EG14144" /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS" gene complement(2359774..2361468) /gene="oxc" /locus_tag="b2373" /gene_synonym="ECK2369" /gene_synonym="JW2370" /gene_synonym="yfdU" /db_xref="EcoGene:EG14143" CDS complement(2359774..2361468) /gene="oxc" /locus_tag="b2373" /gene_synonym="ECK2369" /gene_synonym="JW2370" /gene_synonym="yfdU" /function="enzyme; Oxalate catabolism" /codon_start=1 /transl_table=11 /product="oxalyl CoA decarboxylase, ThDP-dependent" /protein_id="AAC75432.1" /db_xref="GI:1788716" /db_xref="ASAP:ABE-0007826" /db_xref="UniProtKB/Swiss-Prot:P0AFI0" /db_xref="EcoGene:EG14143" /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELK QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLV NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN" gene complement(2361522..2362772) /gene="frc" /locus_tag="b2374" /gene_synonym="ECK2370" /gene_synonym="JW2371" /gene_synonym="yfdW" /db_xref="EcoGene:EG14145" CDS complement(2361522..2362772) /gene="frc" /locus_tag="b2374" /gene_synonym="ECK2370" /gene_synonym="JW2371" /gene_synonym="yfdW" /function="enzyme; Oxalate catabolism" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="formyl-CoA transferase, NAD(P)-binding" /protein_id="AAC75433.1" /db_xref="GI:1788717" /db_xref="ASAP:ABE-0007828" /db_xref="UniProtKB/Swiss-Prot:P69902" /db_xref="EcoGene:EG14145" /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH TAAVLQELGYSDDEIAAMKQNHAI" gene complement(2363285..2363920) /gene="yfdX" /locus_tag="b2375" /gene_synonym="ECK2371" /gene_synonym="JW2372" /db_xref="EcoGene:EG14146" CDS complement(2363285..2363920) /gene="yfdX" /locus_tag="b2375" /gene_synonym="ECK2371" /gene_synonym="JW2372" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75434.1" /db_xref="GI:1788719" /db_xref="ASAP:ABE-0007835" /db_xref="UniProtKB/Swiss-Prot:P76520" /db_xref="EcoGene:EG14146" /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA AAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKK TNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVM ENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN" gene 2364216..2364491 /gene="ypdI" /locus_tag="b2376" /gene_synonym="ECK2372" /gene_synonym="JW2373" /db_xref="EcoGene:EG14376" CDS 2364216..2364491 /gene="ypdI" /locus_tag="b2376" /gene_synonym="ECK2372" /gene_synonym="JW2373" /codon_start=1 /transl_table=11 /product="putative lipoprotein involved in colanic acid biosynthesis" /protein_id="AAC75435.1" /db_xref="GI:2367134" /db_xref="ASAP:ABE-0007839" /db_xref="UniProtKB/Swiss-Prot:O32528" /db_xref="EcoGene:EG14376" /translation="MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAM TTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR" gene complement(2364568..2364810) /gene="yfdY" /locus_tag="b2377" /gene_synonym="ECK2373" /gene_synonym="JW2374" /db_xref="EcoGene:EG14147" CDS complement(2364568..2364810) /gene="yfdY" /locus_tag="b2377" /gene_synonym="ECK2373" /gene_synonym="JW2374" /codon_start=1 /transl_table=11 /product="DUF2545 family putative inner membrane protein" /protein_id="AAC75436.1" /db_xref="GI:1788720" /db_xref="ASAP:ABE-0007841" /db_xref="UniProtKB/Swiss-Prot:P76521" /db_xref="EcoGene:EG14147" /translation="MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY FTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR" gene 2365163..2366083 /gene="lpxP" /locus_tag="b2378" /gene_synonym="ddg" /gene_synonym="ECK2374" /gene_synonym="JW2375" /db_xref="EcoGene:EG12901" CDS 2365163..2366083 /gene="lpxP" /locus_tag="b2378" /gene_synonym="ddg" /gene_synonym="ECK2374" /gene_synonym="JW2375" /function="enzyme; Not classified" /note="putative heat shock protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009245 - lipid A biosynthetic process; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase" /protein_id="AAC75437.2" /db_xref="GI:87082094" /db_xref="ASAP:ABE-0007848" /db_xref="UniProtKB/Swiss-Prot:P0ACV2" /db_xref="EcoGene:EG12901" /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII EKEIMRAPEQYLWIHRRFKTRPVGESSLYI" gene 2366439..2366510 /gene="ypdK" /locus_tag="b4680" /gene_synonym="ECK4495" /db_xref="EcoGene:EG14485" CDS 2366439..2366510 /gene="ypdK" /locus_tag="b4680" /gene_synonym="ECK4495" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="ACO60002.1" /db_xref="GI:226510962" /db_xref="UniProtKB/Swiss-Prot:C1P610" /db_xref="EcoGene:EG14485" /translation="MKYFFMGISFMVIVWAGTFALMI" gene complement(2366575..2367813) /gene="alaC" /locus_tag="b2379" /gene_synonym="ECK2375" /gene_synonym="JW2376" /gene_synonym="yfdZ" /db_xref="EcoGene:EG14198" CDS complement(2366575..2367813) /gene="alaC" /locus_tag="b2379" /gene_synonym="ECK2375" /gene_synonym="JW2376" /gene_synonym="yfdZ" /EC_number="2.6.1.2" /function="enzyme; Amino acid biosynthesis: Alanine" /note="putative aminotransferase" /codon_start=1 /transl_table=11 /product="glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase" /protein_id="AAC75438.1" /db_xref="GI:1788722" /db_xref="ASAP:ABE-0007850" /db_xref="UniProtKB/Swiss-Prot:P77434" /db_xref="EcoGene:EG14198" /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKI PEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA MFRADGLLPASSKHIHENAE" gene 2368189..2369886 /gene="ypdA" /locus_tag="b2380" /gene_synonym="ECK2376" /gene_synonym="JW5388" /db_xref="EcoGene:EG14148" CDS 2368189..2369886 /gene="ypdA" /locus_tag="b2380" /gene_synonym="ECK2376" /gene_synonym="JW5388" /function="putative regulator; Not classified" /note="putative sensor protein" /codon_start=1 /transl_table=11 /product="sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system" /protein_id="AAC75439.1" /db_xref="GI:1788723" /db_xref="ASAP:ABE-0007855" /db_xref="UniProtKB/Swiss-Prot:P0AA93" /db_xref="EcoGene:EG14148" /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE LLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL" gene 2369901..2370635 /gene="ypdB" /locus_tag="b2381" /gene_synonym="ECK2377" /gene_synonym="JW2378" /db_xref="EcoGene:EG14149" CDS 2369901..2370635 /gene="ypdB" /locus_tag="b2381" /gene_synonym="ECK2377" /gene_synonym="JW2378" /function="putative regulator; Not classified" /note="putative 2-component transcriptional regulator; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator activating yhjX; pyruvate-responsive YpdAB two-component system" /protein_id="AAC75440.1" /db_xref="GI:1788724" /db_xref="ASAP:ABE-0007857" /db_xref="UniProtKB/Swiss-Prot:P0AE39" /db_xref="EcoGene:EG14149" /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI LRLKDLDFEVPVSRSKVKEFRQLMHL" gene 2370648..2371505 /gene="ypdC" /locus_tag="b2382" /gene_synonym="ECK2378" /gene_synonym="JW2379" /db_xref="EcoGene:EG14150" CDS 2370648..2371505 /gene="ypdC" /locus_tag="b2382" /gene_synonym="ECK2378" /gene_synonym="JW2379" /function="putative regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="AAC75441.1" /db_xref="GI:1788725" /db_xref="ASAP:ABE-0007859" /db_xref="UniProtKB/Swiss-Prot:P77396" /db_xref="EcoGene:EG14150" /translation="MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSL CIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPT WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL LHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLF AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP GEYSARFQG" gene complement(2371508..2374003) /gene="fryA" /locus_tag="b2383" /gene_synonym="ECK2379" /gene_synonym="JW2380" /gene_synonym="ypdD" /db_xref="EcoGene:EG14151" CDS complement(2371508..2374003) /gene="fryA" /locus_tag="b2383" /gene_synonym="ECK2379" /gene_synonym="JW2380" /gene_synonym="ypdD" /function="putative transport; Not classified" /note="putative PTS system enzyme IIA component, enzyme I; GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system" /codon_start=1 /transl_table=11 /product="putative PTS enzyme: Hpr, enzyme I and IIA components" /protein_id="AAC75442.1" /db_xref="GI:1788726" /db_xref="ASAP:ABE-0007861" /db_xref="UniProtKB/Swiss-Prot:P77439" /db_xref="EcoGene:EG14151" /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA DAKSSLALIGTGTLFNDSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTQAELTA HPLPRSLSRLNPDLLYGNVLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA TLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNKLVLEKPTILVAEDLTPSQ FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG FGVAIPHTKSQWIRHSSISIARLAKPIGWQSEMGEVELVIMLTLGANEGMNHVKVFSQ LARKLVNKNFRQSLFAAQDAQSILTLLETELTF" gene complement(2374028..2375065) /gene="ypdE" /locus_tag="b2384" /gene_synonym="ECK2380" /gene_synonym="JW2381" /db_xref="EcoGene:EG14152" CDS complement(2374028..2375065) /gene="ypdE" /locus_tag="b2384" /gene_synonym="ECK2380" /gene_synonym="JW2381" /codon_start=1 /transl_table=11 /product="aminopeptidase" /protein_id="AAC75443.1" /db_xref="GI:1788727" /db_xref="ASAP:ABE-0007864" /db_xref="UniProtKB/Swiss-Prot:P77585" /db_xref="EcoGene:EG14152" /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR EECKIPGLLDGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV MGKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAI VLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQAD MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRLT RETVVQLTDFR" gene complement(2375065..2376150) /gene="ypdF" /locus_tag="b2385" /gene_synonym="ECK2381" /gene_synonym="JW2382" /db_xref="EcoGene:EG14153" CDS complement(2375065..2376150) /gene="ypdF" /locus_tag="b2385" /gene_synonym="ECK2381" /gene_synonym="JW2382" /function="putative enzyme; Not classified" /note="putative peptidase" /codon_start=1 /transl_table=11 /product="Xaa-Pro aminopeptidase" /protein_id="AAC75444.1" /db_xref="GI:1788728" /db_xref="ASAP:ABE-0007869" /db_xref="UniProtKB/Swiss-Prot:P76524" /db_xref="EcoGene:EG14153" /translation="MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISR ESAHILVDSRYYVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW ETAHRWQSELNAKLVSATPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSE REIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQ GYCSDMTRTLLVNGEGVSAESHLLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRV ITEAGYGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI EDVVLVTPQGAEVLYAMPKTVLLTGEA" gene complement(2376165..2377412) /gene="fryC" /locus_tag="b2386" /gene_synonym="ECK2382" /gene_synonym="JW2383" /gene_synonym="ypdG" /db_xref="EcoGene:EG14154" CDS complement(2376165..2377412) /gene="fryC" /locus_tag="b2386" /gene_synonym="ECK2382" /gene_synonym="JW2383" /gene_synonym="ypdG" /function="putative transport; Not classified" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative enzyme IIC component of PTS" /protein_id="AAC75445.1" /db_xref="GI:1788729" /db_xref="ASAP:ABE-0007871" /db_xref="UniProtKB/Swiss-Prot:P77579" /db_xref="EcoGene:EG14154" /translation="MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGIS RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP FGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI TALMVVFLRLMMFRKGKLLIDSL" gene complement(2377434..2377760) /gene="fryB" /locus_tag="b2387" /gene_synonym="ECK2383" /gene_synonym="JW5389" /gene_synonym="ypdH" /db_xref="EcoGene:EG14155" CDS complement(2377434..2377760) /gene="fryB" /locus_tag="b2387" /gene_synonym="ECK2383" /gene_synonym="JW5389" /gene_synonym="ypdH" /function="putative transport; Not classified" /note="putative PTS system enzyme IIB component; GO_process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system" /codon_start=1 /transl_table=11 /product="putative enzyme IIB component of PTS" /protein_id="AAC75446.1" /db_xref="GI:1788730" /db_xref="ASAP:ABE-0007873" /db_xref="UniProtKB/Swiss-Prot:P69808" /db_xref="EcoGene:EG14155" /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM IASEQQ" gene complement(2377979..2378944) /gene="glk" /locus_tag="b2388" /gene_synonym="ECK2384" /gene_synonym="JW2385" /db_xref="EcoGene:EG12957" CDS complement(2377979..2378944) /gene="glk" /locus_tag="b2388" /gene_synonym="ECK2384" /gene_synonym="JW2385" /EC_number="2.7.1.2" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucokinase" /protein_id="AAC75447.1" /db_xref="GI:1788732" /db_xref="ASAP:ABE-0007875" /db_xref="UniProtKB/Swiss-Prot:P0A6V8" /db_xref="EcoGene:EG12957" /translation="MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL" gene 2379148..2380404 /gene="yfeO" /locus_tag="b2389" /gene_synonym="ECK2385" /gene_synonym="JW2386" /db_xref="EcoGene:EG14156" CDS 2379148..2380404 /gene="yfeO" /locus_tag="b2389" /gene_synonym="ECK2385" /gene_synonym="JW2386" /codon_start=1 /transl_table=11 /product="putative ion channel protein" /protein_id="AAC75448.1" /db_xref="GI:1788733" /db_xref="ASAP:ABE-0007880" /db_xref="UniProtKB/Swiss-Prot:P67729" /db_xref="EcoGene:EG14156" /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG LIVALILGLAGGVSLGPEHPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALF GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMHQMKNPVLVLGIGGFILGILGVIGG PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML PAWLLLAGKPMMMVNRPKQQPPHDNV" gene 2380519..2380845 /gene="ypeC" /locus_tag="b2390" /gene_synonym="ECK2386" /gene_synonym="JW2387" /db_xref="EcoGene:EG14385" CDS 2380519..2380845 /gene="ypeC" /locus_tag="b2390" /gene_synonym="ECK2386" /gene_synonym="JW2387" /note="the overlapping reading frame (b2391) is no longer thought to be an actual gene, and has been deaccessioned" /codon_start=1 /transl_table=11 /product="DUF2502 family putative periplasmic protein" /protein_id="AAC75449.1" /db_xref="GI:1788734" /db_xref="ASAP:ABE-0007883" /db_xref="UniProtKB/Swiss-Prot:P64542" /db_xref="EcoGene:EG14385" /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR GHGHRH" repeat_region 2380870..2380957 /note="REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2380986..2382224) /gene="mntH" /locus_tag="b2392" /gene_synonym="ECK2387" /gene_synonym="JW2388" /gene_synonym="mntA" /gene_synonym="yfeP" /db_xref="EcoGene:EG14157" CDS complement(2380986..2382224) /gene="mntH" /locus_tag="b2392" /gene_synonym="ECK2387" /gene_synonym="JW2388" /gene_synonym="mntA" /gene_synonym="yfeP" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="manganese/divalent cation transporter" /protein_id="AAC75451.1" /db_xref="GI:1788736" /db_xref="ASAP:ABE-0007889" /db_xref="UniProtKB/Swiss-Prot:P0A769" /db_xref="EcoGene:EG14157" /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV IVVLVVALNIWLLVGTALGL" gene 2382560..2383762 /gene="nupC" /locus_tag="b2393" /gene_synonym="cru" /gene_synonym="ECK2388" /gene_synonym="JW2389" /db_xref="EcoGene:EG11971" CDS 2382560..2383762 /gene="nupC" /locus_tag="b2393" /gene_synonym="cru" /gene_synonym="ECK2388" /gene_synonym="JW2389" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="permease of transport system for 3 nucleosides; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="nucleoside (except guanosine) transporter" /protein_id="AAC75452.1" /db_xref="GI:1788737" /db_xref="ASAP:ABE-0007893" /db_xref="UniProtKB/Swiss-Prot:P0AFF2" /db_xref="EcoGene:EG11971" /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS ASIAALVL" mobile_element 2383791..2385135 /mobile_element_type="insertion sequence:IS186C" gene 2383849..2384961 /gene="insL1" /locus_tag="b2394" /gene_synonym="ECK0016" /db_xref="EcoGene:EG40012" CDS 2383849..2384961 /gene="insL1" /locus_tag="b2394" /gene_synonym="ECK0016" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS186 transposase" /protein_id="AAC75453.2" /db_xref="GI:87082095" /db_xref="ASAP:ABE-0007897" /db_xref="UniProtKB/Swiss-Prot:P0CF93" /db_xref="EcoGene:EG40012" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(2385161..2387350) /gene="yfeA" /locus_tag="b2395" /gene_synonym="ECK2389" /gene_synonym="JW5391" /db_xref="EcoGene:EG11145" CDS complement(2385161..2387350) /gene="yfeA" /locus_tag="b2395" /gene_synonym="ECK2389" /gene_synonym="JW5391" /codon_start=1 /transl_table=11 /product="putative diguanylate cyclase" /protein_id="AAC75454.2" /db_xref="GI:87082096" /db_xref="ASAP:ABE-0007899" /db_xref="UniProtKB/Swiss-Prot:P23842" /db_xref="EcoGene:EG11145" /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD" gene complement(2387559..2387634) /gene="alaX" /locus_tag="b2396" /gene_synonym="alaWbeta" /gene_synonym="ECK2390" /gene_synonym="JWR0046" /db_xref="EcoGene:EG30012" tRNA complement(2387559..2387634) /gene="alaX" /locus_tag="b2396" /gene_synonym="alaWbeta" /gene_synonym="ECK2390" /gene_synonym="JWR0046" /product="tRNA-Ala" /note="anticodon: GGC" /db_xref="ASAP:ABE-0007902" /db_xref="EcoGene:EG30012" gene complement(2387674..2387749) /gene="alaW" /locus_tag="b2397" /gene_synonym="alaWalpha" /gene_synonym="ECK2391" /gene_synonym="JWR0045" /db_xref="EcoGene:EG30011" tRNA complement(2387674..2387749) /gene="alaW" /locus_tag="b2397" /gene_synonym="alaWalpha" /gene_synonym="ECK2391" /gene_synonym="JWR0045" /product="tRNA-Ala" /note="anticodon: GGC" /db_xref="ASAP:ABE-0007904" /db_xref="EcoGene:EG30011" gene 2387985..2388329 /gene="yfeC" /locus_tag="b2398" /gene_synonym="ECK2392" /gene_synonym="JW2393" /db_xref="EcoGene:EG11431" CDS 2387985..2388329 /gene="yfeC" /locus_tag="b2398" /gene_synonym="ECK2392" /gene_synonym="JW2393" /codon_start=1 /transl_table=11 /product="DUF1323 family putative DNA-binding protein" /protein_id="AAC75455.2" /db_xref="GI:87082097" /db_xref="ASAP:ABE-0007907" /db_xref="UniProtKB/Swiss-Prot:P0AD37" /db_xref="EcoGene:EG11431" /translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII GLLQRLGIRDSK" gene 2388331..2388723 /gene="yfeD" /locus_tag="b2399" /gene_synonym="ECK2393" /gene_synonym="JW2394" /db_xref="EcoGene:EG11432" CDS 2388331..2388723 /gene="yfeD" /locus_tag="b2399" /gene_synonym="ECK2393" /gene_synonym="JW2394" /codon_start=1 /transl_table=11 /product="DUF1323 family putative DNA-binding protein" /protein_id="AAC75456.3" /db_xref="GI:226510963" /db_xref="ASAP:ABE-0007909" /db_xref="UniProtKB/Swiss-Prot:P27238" /db_xref="EcoGene:EG11432" /translation="MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGG RARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTD IEQEKVAQFLSREGIRNFLARLDIDESA" gene complement(2388775..2390190) /gene="gltX" /locus_tag="b2400" /gene_synonym="ECK2394" /gene_synonym="JW2395" /db_xref="EcoGene:EG10407" CDS complement(2388775..2390190) /gene="gltX" /locus_tag="b2400" /gene_synonym="ECK2394" /gene_synonym="JW2395" /EC_number="6.1.1.17" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="glutamate tRNA synthetase, catalytic subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="AAC75457.1" /db_xref="GI:1788743" /db_xref="ASAP:ABE-0007911" /db_xref="UniProtKB/Swiss-Prot:P04805" /db_xref="EcoGene:EG10407" /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK TRSIERINKALDFIAERENQQ" gene 2390449..2390524 /gene="valU" /locus_tag="b2401" /gene_synonym="ECK2395" /gene_synonym="JWR0047" /gene_synonym="valUalpha" /db_xref="EcoGene:EG30110" tRNA 2390449..2390524 /gene="valU" /locus_tag="b2401" /gene_synonym="ECK2395" /gene_synonym="JWR0047" /gene_synonym="valUalpha" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0007914" /db_xref="EcoGene:EG30110" gene 2390569..2390644 /gene="valX" /locus_tag="b2402" /gene_synonym="ECK2396" /gene_synonym="JWR0048" /gene_synonym="valUbeta" /db_xref="EcoGene:EG30113" tRNA 2390569..2390644 /gene="valX" /locus_tag="b2402" /gene_synonym="ECK2396" /gene_synonym="JWR0048" /gene_synonym="valUbeta" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0007916" /db_xref="EcoGene:EG30113" gene 2390691..2390766 /gene="valY" /locus_tag="b2403" /gene_synonym="ECK2397" /gene_synonym="JWR0049" /gene_synonym="valUgamma" /db_xref="EcoGene:EG30114" tRNA 2390691..2390766 /gene="valY" /locus_tag="b2403" /gene_synonym="ECK2397" /gene_synonym="JWR0049" /gene_synonym="valUgamma" /product="tRNA-Val" /note="anticodon: UAC" /db_xref="ASAP:ABE-0007918" /db_xref="EcoGene:EG30114" gene 2390771..2390846 /gene="lysV" /locus_tag="b2404" /gene_synonym="ECK2398" /gene_synonym="JWR0050" /gene_synonym="supN" /db_xref="EcoGene:EG30056" tRNA 2390771..2390846 /gene="lysV" /locus_tag="b2404" /gene_synonym="ECK2398" /gene_synonym="JWR0050" /gene_synonym="supN" /product="tRNA-Lys" /note="anticodon: UUU" /db_xref="ASAP:ABE-0007920" /db_xref="EcoGene:EG30056" repeat_region 2391056..2391084 /note="REP173 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2391111..2391995) /gene="xapR" /locus_tag="b2405" /gene_synonym="ECK2399" /gene_synonym="JW2396" /gene_synonym="pRndR" /gene_synonym="yfeB" /db_xref="EcoGene:EG11146" CDS complement(2391111..2391995) /gene="xapR" /locus_tag="b2405" /gene_synonym="ECK2399" /gene_synonym="JW2396" /gene_synonym="pRndR" /gene_synonym="yfeB" /function="regulator; Central intermediary metabolism: Nucleotide interconversions" /note="regulator for xapA; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of xapAB" /protein_id="AAC75458.1" /db_xref="GI:2367136" /db_xref="ASAP:ABE-0007922" /db_xref="UniProtKB/Swiss-Prot:P23841" /db_xref="EcoGene:EG11146" /translation="MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKE LENQLGTQLFIRHSRSVVLTHAGKILMEESRRLLVNANNVLARIEQIGRGEAGRIELG VVGTAMWGRMRPVMRRFLRENPNVDVLFREKMPAMQMALLERRELDAGIWRMATEPPT GFTSLRLHESAFLVAMPEEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQV GFSPVVIREVNEPQTVLAMVSMGIGITLIADSYAQMNWPGVIFRPLKQRIPADLYIVY ETQQVTPAMVKLLAALTQ" gene complement(2392247..2393503) /gene="xapB" /locus_tag="b2406" /gene_synonym="ECK2400" /gene_synonym="JW2397" /db_xref="EcoGene:EG13159" CDS complement(2392247..2393503) /gene="xapB" /locus_tag="b2406" /gene_synonym="ECK2400" /gene_synonym="JW2397" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="xanthosine permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="xanthosine transporter" /protein_id="AAC75459.1" /db_xref="GI:1788745" /db_xref="ASAP:ABE-0007925" /db_xref="UniProtKB/Swiss-Prot:P45562" /db_xref="EcoGene:EG13159" /translation="MSIAMRLKVMSFLQYFIWGSWLVTLGSYMINTLHFTGANVGMVY SSKGIAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVN AMAFMPTIALSNSVSYSCLAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSL QLYIASGASLLLSAYALTLPKIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAM MLGAVLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLK RFGIKTVMLMSMVAWTLRFGFFAYGDPSTTGFILLLLSMIVYGCAFDFFNISGSVFVE QEVDSSIRASAQGLFMTMVNGVGAWVGSILSGMAVDYFSVDGVKDWQTIWLVFAGYAL FLAVIFFFGFKYNHDPEKIKHRAVTH" gene complement(2393563..2394396) /gene="xapA" /locus_tag="b2407" /gene_synonym="ECK2401" /gene_synonym="JW2398" /gene_synonym="pndA" /db_xref="EcoGene:EG20250" CDS complement(2393563..2394396) /gene="xapA" /locus_tag="b2407" /gene_synonym="ECK2401" /gene_synonym="JW2398" /gene_synonym="pndA" /EC_number="2.4.2.1" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="xanthosine phosphorylase; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="purine nucleoside phosphorylase 2; nicotinamide 1-beta-D-riboside synthase" /protein_id="AAC75460.1" /db_xref="GI:1788746" /db_xref="ASAP:ABE-0007927" /db_xref="UniProtKB/Swiss-Prot:P45563" /db_xref="EcoGene:EG20250" /translation="MSQVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIE NAVAISYEKLPGFPVSTVHGHAGELVLGHLQGVPVVCMKGRGHFYEGRGMTIMTDAIR TFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSL ANAYDAEYRALLQKVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVV PEVISARHCDLKVVAVSAITNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKI A" gene 2394645..2395409 /gene="yfeN" /locus_tag="b2408" /gene_synonym="ECK2402" /gene_synonym="JW2399" /db_xref="EcoGene:EG13160" CDS 2394645..2395409 /gene="yfeN" /locus_tag="b2408" /gene_synonym="ECK2402" /gene_synonym="JW2399" /function="putative enzyme; Not classified" /note="putative sugar hydrolase" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC75461.1" /db_xref="GI:1788747" /db_xref="ASAP:ABE-0007930" /db_xref="UniProtKB/Swiss-Prot:P45564" /db_xref="EcoGene:EG13160" /translation="MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTE KSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRI YLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWW NATSHITTGIQYRYADDKLGEDFYQDAIIYSIKFNF" gene complement(2395448..2396374) /gene="yfeR" /locus_tag="b2409" /gene_synonym="ECK2403" /gene_synonym="JW2400" /gene_synonym="osmT" /db_xref="EcoGene:EG14159" CDS complement(2395448..2396374) /gene="yfeR" /locus_tag="b2409" /gene_synonym="ECK2403" /gene_synonym="JW2400" /gene_synonym="osmT" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional regulator of yefH" /protein_id="AAC75462.1" /db_xref="GI:1788748" /db_xref="ASAP:ABE-0007932" /db_xref="UniProtKB/Swiss-Prot:P0ACR7" /db_xref="EcoGene:EG14159" /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR SLSTAAEALWDVVRDQGNALMAGREGDPLYQI" gene 2396464..2397462 /gene="yfeH" /locus_tag="b2410" /gene_synonym="ECK2404" /gene_synonym="JW5876" /db_xref="EcoGene:EG12376" CDS 2396464..2397462 /gene="yfeH" /locus_tag="b2410" /gene_synonym="ECK2404" /gene_synonym="JW5876" /function="putative enzyme; Not classified" /note="putative cytochrome oxidase" /codon_start=1 /transl_table=11 /product="putative inorganic ion transporter" /protein_id="AAC75463.1" /db_xref="GI:1788749" /db_xref="ASAP:ABE-0007936" /db_xref="UniProtKB/Swiss-Prot:P39836" /db_xref="EcoGene:EG12376" /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF LYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLSFNKADEITIVFCGSKKSLANG IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA" gene complement(2397459..2397677) /gene="ypeB" /locus_tag="b4546" /gene_synonym="ECK2405" /gene_synonym="JW5877" /db_xref="EcoGene:EG14366" CDS complement(2397459..2397677) /gene="ypeB" /locus_tag="b4546" /gene_synonym="ECK2405" /gene_synonym="JW5877" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DUF3820 family protein" /protein_id="ABD18696.1" /db_xref="GI:87082098" /db_xref="ASAP:ABE-0285067" /db_xref="UniProtKB/Swiss-Prot:P0AD40" /db_xref="EcoGene:EG14366" /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG KLGELMQITLLIKTEGLTQLVQPLKRPL" gene complement(2397679..2399694) /gene="ligA" /locus_tag="b2411" /gene_synonym="dnaL" /gene_synonym="ECK2406" /gene_synonym="JW2403" /gene_synonym="lig" /gene_synonym="lop" /gene_synonym="pdeC" /db_xref="EcoGene:EG10534" CDS complement(2397679..2399694) /gene="ligA" /locus_tag="b2411" /gene_synonym="dnaL" /gene_synonym="ECK2406" /gene_synonym="JW2403" /gene_synonym="lig" /gene_synonym="lop" /gene_synonym="pdeC" /EC_number="6.5.1.2" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 3018436" /note="DNA ligase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="DNA ligase, NAD(+)-dependent" /protein_id="AAC75464.1" /db_xref="GI:1788750" /db_xref="ASAP:ABE-0007938" /db_xref="UniProtKB/Swiss-Prot:P15042" /db_xref="EcoGene:EG10534" /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED RPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS" gene complement(2399765..2400751) /gene="zipA" /locus_tag="b2412" /gene_synonym="ECK2407" /gene_synonym="JW2404" /db_xref="EcoGene:EG14169" CDS complement(2399765..2400751) /gene="zipA" /locus_tag="b2412" /gene_synonym="ECK2407" /gene_synonym="JW2404" /function="membrane; Cell division" /note="cell division protein involved in FtsZ ring; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="FtsZ stabilizer" /protein_id="AAC75465.1" /db_xref="GI:1788752" /db_xref="ASAP:ABE-0007942" /db_xref="UniProtKB/Swiss-Prot:P77173" /db_xref="EcoGene:EG14169" /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR QPVQQPPEAQVPPQHAPHPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA" gene 2400981..2401742 /gene="cysZ" /locus_tag="b2413" /gene_synonym="ECK2408" /gene_synonym="JW2406" /db_xref="EcoGene:EG10003" CDS 2400981..2401742 /gene="cysZ" /locus_tag="b2413" /gene_synonym="ECK2408" /gene_synonym="JW2406" /function="putative transport; Transport of small molecules: Anions" /note="required for sulfate transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfate transporter, sulfite inhibited" /protein_id="AAC75466.1" /db_xref="GI:1788753" /db_xref="ASAP:ABE-0007953" /db_xref="UniProtKB/Swiss-Prot:P0A6J3" /db_xref="EcoGene:EG10003" /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR" gene 2401927..2402898 /gene="cysK" /locus_tag="b2414" /gene_synonym="cysZ" /gene_synonym="ECK2409" /gene_synonym="JW2407" /db_xref="EcoGene:EG10192" CDS 2401927..2402898 /gene="cysK" /locus_tag="b2414" /gene_synonym="cysZ" /gene_synonym="ECK2409" /gene_synonym="JW2407" /EC_number="2.5.1.47" /function="enzyme; Amino acid biosynthesis: Cysteine" /note="cysteine synthase A, O-acetylserine sulfhydrolase A; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0019344 - cysteine biosynthetic process" /codon_start=1 /transl_table=11 /product="cysteine synthase A, O-acetylserine sulfhydrolase A subunit" /protein_id="AAC75467.1" /db_xref="GI:1788754" /db_xref="ASAP:ABE-0007957" /db_xref="UniProtKB/Swiss-Prot:P0ABK5" /db_xref="EcoGene:EG10192" /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ" gene 2403282..2403539 /gene="ptsH" /locus_tag="b2415" /gene_synonym="ctr" /gene_synonym="ECK2410" /gene_synonym="hpr" /gene_synonym="iex?" /gene_synonym="JW2408" /db_xref="EcoGene:EG10788" CDS 2403282..2403539 /gene="ptsH" /locus_tag="b2415" /gene_synonym="ctr" /gene_synonym="ECK2410" /gene_synonym="hpr" /gene_synonym="iex?" /gene_synonym="JW2408" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9868784,10094700" /note="PTS system protein HPr; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)" /protein_id="AAC75468.1" /db_xref="GI:1788755" /db_xref="ASAP:ABE-0007962" /db_xref="UniProtKB/Swiss-Prot:P0AA04" /db_xref="EcoGene:EG10788" /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE" gene 2403584..2405311 /gene="ptsI" /locus_tag="b2416" /gene_synonym="ctr" /gene_synonym="ECK2411" /gene_synonym="JW2409" /db_xref="EcoGene:EG10789" CDS 2403584..2405311 /gene="ptsI" /locus_tag="b2416" /gene_synonym="ctr" /gene_synonym="ECK2411" /gene_synonym="JW2409" /EC_number="2.7.3.9" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="PEP-protein phosphotransferase system enzyme I; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="PEP-protein phosphotransferase of PTS system (enzyme I)" /protein_id="AAC75469.1" /db_xref="GI:1788756" /db_xref="ASAP:ABE-0007967" /db_xref="UniProtKB/Swiss-Prot:P08839" /db_xref="EcoGene:EG10789" /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPM IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN KFIEEKTIC" gene 2405352..2405861 /gene="crr" /locus_tag="b2417" /gene_synonym="ECK2412" /gene_synonym="gsr" /gene_synonym="iex" /gene_synonym="JW2410" /gene_synonym="tgs" /gene_synonym="treD" /db_xref="EcoGene:EG10165" CDS 2405352..2405861 /gene="crr" /locus_tag="b2417" /gene_synonym="ECK2412" /gene_synonym="gsr" /gene_synonym="iex" /gene_synonym="JW2410" /gene_synonym="tgs" /gene_synonym="treD" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, glucose-specific IIA component; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucose-specific enzyme IIA component of PTS" /protein_id="AAC75470.1" /db_xref="GI:1788757" /db_xref="ASAP:ABE-0007971" /db_xref="UniProtKB/Swiss-Prot:P69783" /db_xref="EcoGene:EG10165" /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG ETPVIRIKK" gene complement(2405904..2406755) /gene="pdxK" /locus_tag="b2418" /gene_synonym="ECK2413" /gene_synonym="JW2411" /gene_synonym="pdxL" /gene_synonym="thiJ" /gene_synonym="yfeI" /db_xref="EcoGene:EG12642" CDS complement(2405904..2406755) /gene="pdxK" /locus_tag="b2418" /gene_synonym="ECK2413" /gene_synonym="JW2411" /gene_synonym="pdxL" /gene_synonym="thiJ" /gene_synonym="yfeI" /EC_number="2.7.1.35" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="pyridoxal/pyridoxine/pyridoxamine kinase" /codon_start=1 /transl_table=11 /product="pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase" /protein_id="AAC75471.1" /db_xref="GI:1788758" /db_xref="ASAP:ABE-0007973" /db_xref="UniProtKB/Swiss-Prot:P40191" /db_xref="EcoGene:EG12642" /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNV ISHSRVKTDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELI LPPLAEA" gene 2406860..2407234 /gene="yfeK" /locus_tag="b2419" /gene_synonym="ECK2414" /gene_synonym="JW2412" /db_xref="EcoGene:EG12644" CDS 2406860..2407234 /gene="yfeK" /locus_tag="b2419" /gene_synonym="ECK2414" /gene_synonym="JW2412" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75472.1" /db_xref="GI:1788759" /db_xref="ASAP:ABE-0007977" /db_xref="UniProtKB/Swiss-Prot:Q47702" /db_xref="EcoGene:EG12644" /translation="MKKIICLVITLLMTLPVYAKLTAHEEARINAMLEGLAQKKDLIF VRNGDEHTCYEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE NAQPFLHALIAQTDKTVPAEGN" gene 2407267..2408001 /gene="yfeS" /locus_tag="b2420" /gene_synonym="ECK2415" /gene_synonym="JW2413" /db_xref="EcoGene:EG14160" CDS 2407267..2408001 /gene="yfeS" /locus_tag="b2420" /gene_synonym="ECK2415" /gene_synonym="JW2413" /codon_start=1 /transl_table=11 /product="WGR domain protein" /protein_id="AAC75473.1" /db_xref="GI:1788760" /db_xref="ASAP:ABE-0007979" /db_xref="UniProtKB/Swiss-Prot:P78271" /db_xref="EcoGene:EG14160" /translation="MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFD NEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDP LYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSI LEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKI LQWGDGQDSPILQKMIDDLTAFPHEN" repeat_region 2408053..2408150 /note="RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2408190..2409101) /gene="cysM" /locus_tag="b2421" /gene_synonym="ECK2416" /gene_synonym="JW2414" /db_xref="EcoGene:EG10193" CDS complement(2408190..2409101) /gene="cysM" /locus_tag="b2421" /gene_synonym="ECK2416" /gene_synonym="JW2414" /EC_number="2.5.1.47" /function="enzyme; Amino acid biosynthesis: Cysteine" /experiment="N-terminus verified by Edman degradation: PMID 8663055" /note="cysteine synthase B, O-acetylserine sulfhydrolase B; GO_process: GO:0019344 - cysteine biosynthetic process" /codon_start=1 /transl_table=11 /product="cysteine synthase B (O-acetylserine sulfhydrolase B)" /protein_id="AAC75474.1" /db_xref="GI:2367138" /db_xref="ASAP:ABE-0007982" /db_xref="UniProtKB/Swiss-Prot:P16703" /db_xref="EcoGene:EG10193" /translation="MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRA ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLP GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDAVVV AIICDRGDRYLSTGVFGEEHFSQGAGI" repeat_region 2409125..2409160 /note="REP175 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2409235..2410332) /gene="cysA" /locus_tag="b2422" /gene_synonym="ECK2417" /gene_synonym="JW2415" /db_xref="EcoGene:EG10183" CDS complement(2409235..2410332) /gene="cysA" /locus_tag="b2422" /gene_synonym="ECK2417" /gene_synonym="JW2415" /EC_number="3.6.3.25" /function="transport; Transport of small molecules: Anions" /note="ATP-binding component of sulfate permease A protein; chromate resistance; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0015419 - sulfate transmembrane-transporting ATPase activity; GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="sulfate/thiosulfate transporter subunit" /protein_id="AAC75475.1" /db_xref="GI:1788761" /db_xref="ASAP:ABE-0007986" /db_xref="UniProtKB/Swiss-Prot:P16676" /db_xref="EcoGene:EG10183" /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE RLFVGLQHARLYNGDERIETRDEELALAQSA" gene complement(2410322..2411197) /gene="cysW" /locus_tag="b2423" /gene_synonym="ECK2418" /gene_synonym="JW2416" /db_xref="EcoGene:EG10198" CDS complement(2410322..2411197) /gene="cysW" /locus_tag="b2423" /gene_synonym="ECK2418" /gene_synonym="JW2416" /function="transport; Transport of small molecules: Anions" /note="sulfate transport system permease W protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfate/thiosulfate ABC transporter permease" /protein_id="AAC75476.2" /db_xref="GI:87082099" /db_xref="ASAP:ABE-0007988" /db_xref="UniProtKB/Swiss-Prot:P0AEB0" /db_xref="EcoGene:EG10198" /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL ENQEKRAQQEEHHEH" gene complement(2411197..2412030) /gene="cysU" /locus_tag="b2424" /gene_synonym="cysT" /gene_synonym="ECK2419" /gene_synonym="JW2417" /db_xref="EcoGene:EG10197" CDS complement(2411197..2412030) /gene="cysU" /locus_tag="b2424" /gene_synonym="cysT" /gene_synonym="ECK2419" /gene_synonym="JW2417" /function="transport; Transport of small molecules: Anions" /note="sulfate, thiosulfate transport system permease T protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfate/thiosulfate ABC transporter permease" /protein_id="AAC75477.1" /db_xref="GI:1788764" /db_xref="ASAP:ABE-0007990" /db_xref="UniProtKB/Swiss-Prot:P16701" /db_xref="EcoGene:EG10197" /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG H" gene complement(2412030..2413046) /gene="cysP" /locus_tag="b2425" /gene_synonym="ECK2420" /gene_synonym="JW2418" /db_xref="EcoGene:EG10195" CDS complement(2412030..2413046) /gene="cysP" /locus_tag="b2425" /gene_synonym="ECK2420" /gene_synonym="JW2418" /function="transport; Transport of small molecules: Anions" /note="thiosulfate binding protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="thiosulfate-binding protein" /protein_id="AAC75478.1" /db_xref="GI:1788765" /db_xref="ASAP:ABE-0007992" /db_xref="UniProtKB/Swiss-Prot:P16700" /db_xref="EcoGene:EG10195" /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY TYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA AGRN" gene complement(2413350..2414141) /gene="ucpA" /locus_tag="b2426" /gene_synonym="ECK2421" /gene_synonym="JW5394" /gene_synonym="yfeF" /db_xref="EcoGene:EG12133" CDS complement(2413350..2414141) /gene="ucpA" /locus_tag="b2426" /gene_synonym="ECK2421" /gene_synonym="JW5394" /gene_synonym="yfeF" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="furfural resistance protein, putative short-chain oxidoreductase" /protein_id="AAC75479.2" /db_xref="GI:87082100" /db_xref="ASAP:ABE-0007996" /db_xref="UniProtKB/Swiss-Prot:P37440" /db_xref="EcoGene:EG12133" /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI" gene complement(2414270..2415127) /gene="murR" /locus_tag="b2427" /gene_synonym="ECK2422" /gene_synonym="JW2420" /gene_synonym="yfeT" /db_xref="EcoGene:EG14161" CDS complement(2414270..2415127) /gene="murR" /locus_tag="b2427" /gene_synonym="ECK2422" /gene_synonym="JW2420" /gene_synonym="yfeT" /codon_start=1 /transl_table=11 /product="repressor for murPQ, MurNAc 6-P inducible" /protein_id="AAC75480.1" /db_xref="GI:1788767" /db_xref="ASAP:ABE-0008000" /db_xref="UniProtKB/Swiss-Prot:P77245" /db_xref="EcoGene:EG14161" /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIA RKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL TDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR SSELTQRLK" gene 2415291..2416187 /gene="murQ" /locus_tag="b2428" /gene_synonym="ECK2423" /gene_synonym="JW2421" /gene_synonym="yfeU" /db_xref="EcoGene:EG14162" CDS 2415291..2416187 /gene="murQ" /locus_tag="b2428" /gene_synonym="ECK2423" /gene_synonym="JW2421" /gene_synonym="yfeU" /function="putative regulator; Not classified" /note="putative regulator" /codon_start=1 /transl_table=11 /product="N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase" /protein_id="AAC75481.1" /db_xref="GI:1788768" /db_xref="ASAP:ABE-0008007" /db_xref="UniProtKB/Swiss-Prot:P76535" /db_xref="EcoGene:EG14162" /translation="MQFEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERV LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK VFGNLMVDVVATNEKLHVRQVNIVKNATGCSAEQAEAALIACERNCKTAIVMVLKNLD AAEAKKRLDQHGGFIRQVLDKE" gene 2416191..2417615 /gene="murP" /locus_tag="b2429" /gene_synonym="ECK2424" /gene_synonym="JW2422" /gene_synonym="yfeV" /db_xref="EcoGene:EG14163" CDS 2416191..2417615 /gene="murP" /locus_tag="b2429" /gene_synonym="ECK2424" /gene_synonym="JW2422" /gene_synonym="yfeV" /function="transport; Murein sacculus, peptidoglycan" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="N-acetylmuramic acid permease, EIIBC component, PTS system" /protein_id="AAC75482.1" /db_xref="GI:1788769" /db_xref="ASAP:ABE-0008009" /db_xref="UniProtKB/Swiss-Prot:P77272" /db_xref="EcoGene:EG14163" /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD PNIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS LFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK PFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG GILVAWVCGFIFTTLFGCRNVNLD" gene 2417620..2418924 /gene="yfeW" /locus_tag="b2430" /gene_synonym="ECK2425" /gene_synonym="JW5395" /gene_synonym="pbp4B" /db_xref="EcoGene:EG14164" CDS 2417620..2418924 /gene="yfeW" /locus_tag="b2430" /gene_synonym="ECK2425" /gene_synonym="JW5395" /gene_synonym="pbp4B" /function="enzyme; Murein sacculus, peptidoglycan" /note="putative beta-lactamase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="penicillin binding protein PBP4B; weak DD-carboxypeptidase activity" /protein_id="AAC75483.2" /db_xref="GI:87082101" /db_xref="ASAP:ABE-0008012" /db_xref="UniProtKB/Swiss-Prot:P77619" /db_xref="EcoGene:EG14164" /translation="MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMD RWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLAS NTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG FPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESV TGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTS TLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMF TTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVML SNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK" repeat_region 2418984..2419081 /note="RIP176 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2419164..2420063) /gene="yfeX" /locus_tag="b2431" /gene_synonym="ECK2426" /gene_synonym="JW2424" /db_xref="EcoGene:EG14165" CDS complement(2419164..2420063) /gene="yfeX" /locus_tag="b2431" /gene_synonym="ECK2426" /gene_synonym="JW2424" /function="enzyme; Transport of small molecules: Cations" /codon_start=1 /transl_table=11 /product="porphyrinogen oxidase, cytoplasmic" /protein_id="AAC75484.2" /db_xref="GI:87082102" /db_xref="ASAP:ABE-0008015" /db_xref="UniProtKB/Swiss-Prot:P76536" /db_xref="EcoGene:EG14165" /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTR VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM LRFTKPVTGGYYFAPSLDKLMAL" gene complement(2420159..2420734) /gene="yfeY" /locus_tag="b2432" /gene_synonym="ECK2427" /gene_synonym="JW2425" /db_xref="EcoGene:EG14166" CDS complement(2420159..2420734) /gene="yfeY" /locus_tag="b2432" /gene_synonym="ECK2427" /gene_synonym="JW2425" /codon_start=1 /transl_table=11 /product="RpoE-regulated lipoprotein" /protein_id="AAC75485.1" /db_xref="GI:1788772" /db_xref="ASAP:ABE-0008017" /db_xref="UniProtKB/Swiss-Prot:P76537" /db_xref="EcoGene:EG14166" /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR" gene complement(2420795..2421244) /gene="yfeZ" /locus_tag="b2433" /gene_synonym="ECK2428" /gene_synonym="JW2426" /db_xref="EcoGene:EG14167" CDS complement(2420795..2421244) /gene="yfeZ" /locus_tag="b2433" /gene_synonym="ECK2428" /gene_synonym="JW2426" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC75486.2" /db_xref="GI:87082103" /db_xref="ASAP:ABE-0008023" /db_xref="UniProtKB/Swiss-Prot:P76538" /db_xref="EcoGene:EG14167" /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASR EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVL LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFYEVKE" gene complement(2421231..2421656) /gene="ypeA" /locus_tag="b2434" /gene_synonym="ECK2429" /gene_synonym="JW2427" /db_xref="EcoGene:EG14168" CDS complement(2421231..2421656) /gene="ypeA" /locus_tag="b2434" /gene_synonym="ECK2429" /gene_synonym="JW2427" /codon_start=1 /transl_table=11 /product="GNAT family putative N-acetyltransferase" /protein_id="AAC75487.2" /db_xref="GI:87082104" /db_xref="ASAP:ABE-0008028" /db_xref="UniProtKB/Swiss-Prot:P76539" /db_xref="EcoGene:EG14168" /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL FLVAEVNGDVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK IQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY" gene 2421870..2422739 /gene="amiA" /locus_tag="b2435" /gene_synonym="ECK2430" /gene_synonym="JW2428" /gene_synonym="yfeE" /db_xref="EcoGene:EG11823" CDS 2421870..2422739 /gene="amiA" /locus_tag="b2435" /gene_synonym="ECK2430" /gene_synonym="JW2428" /gene_synonym="yfeE" /EC_number="3.5.1.28" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-l-alanine amidase I" /protein_id="AAC75488.1" /db_xref="GI:1788776" /db_xref="ASAP:ABE-0008032" /db_xref="UniProtKB/Swiss-Prot:P36548" /db_xref="EcoGene:EG11823" /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDELLKTSNG HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF HWFDNQKAHSKKR" gene 2422743..2423642 /gene="hemF" /locus_tag="b2436" /gene_synonym="ECK2431" /gene_synonym="JW2429" /gene_synonym="popB" /gene_synonym="sec" /db_xref="EcoGene:EG12189" CDS 2422743..2423642 /gene="hemF" /locus_tag="b2436" /gene_synonym="ECK2431" /gene_synonym="JW2429" /gene_synonym="popB" /gene_synonym="sec" /EC_number="1.3.3.3" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="AAC75489.1" /db_xref="GI:1788777" /db_xref="ASAP:ABE-0008034" /db_xref="UniProtKB/Swiss-Prot:P36553" /db_xref="EcoGene:EG12189" /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV PTSHANVRFFIAEKPGADPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY PRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDRCFAFMQAVGKGYTDAYLPIVE RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY DYQPKDGSPEAALSEFIKVRDWV" gene complement(2423648..2424700) /gene="eutR" /locus_tag="b2437" /gene_synonym="ECK2432" /gene_synonym="JW2430" /gene_synonym="yfeG" /db_xref="EcoGene:EG12190" CDS complement(2423648..2424700) /gene="eutR" /locus_tag="b2437" /gene_synonym="ECK2432" /gene_synonym="JW2430" /gene_synonym="yfeG" /function="regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="eut operon transcriptional activator, AraC family" /protein_id="AAC75490.1" /db_xref="GI:1788778" /db_xref="ASAP:ABE-0008036" /db_xref="UniProtKB/Swiss-Prot:P36547" /db_xref="EcoGene:EG12190" /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD RVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA FHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLF SEKPSLTLHQRMREWG" repeat_region 2424710..2424733 /note="REP177 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2424746..2425246) /gene="eutK" /locus_tag="b2438" /gene_synonym="ECK2433" /gene_synonym="JW2431" /gene_synonym="yffI" /db_xref="EcoGene:EG14170" CDS complement(2424746..2425246) /gene="eutK" /locus_tag="b2438" /gene_synonym="ECK2433" /gene_synonym="JW2431" /gene_synonym="yffI" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="putative ethanol utilization carboxysome structural protein" /protein_id="AAC75491.2" /db_xref="GI:87082105" /db_xref="ASAP:ABE-0008039" /db_xref="UniProtKB/Swiss-Prot:P76540" /db_xref="EcoGene:EG14170" /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL VVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR YRLKPH" gene complement(2425259..2425918) /gene="eutL" /locus_tag="b2439" /gene_synonym="ECK2434" /gene_synonym="JW2432" /gene_synonym="yffJ" /db_xref="EcoGene:EG14171" CDS complement(2425259..2425918) /gene="eutL" /locus_tag="b2439" /gene_synonym="ECK2434" /gene_synonym="JW2432" /gene_synonym="yffJ" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="putative ethanol utilization carboxysome structural protein" /protein_id="AAC75492.1" /db_xref="GI:1788780" /db_xref="ASAP:ABE-0008041" /db_xref="UniProtKB/Swiss-Prot:P76541" /db_xref="EcoGene:EG14171" /translation="MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADS DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA MIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY GIDAALKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR A" gene complement(2425928..2426815) /gene="eutC" /locus_tag="b2440" /gene_synonym="ECK2435" /gene_synonym="JW2433" /db_xref="EcoGene:EG50007" CDS complement(2425928..2426815) /gene="eutC" /locus_tag="b2440" /gene_synonym="ECK2435" /gene_synonym="JW2433" /EC_number="4.3.1.7" /function="enzyme; Degradation of small molecules: Amines" /experiment="N-terminus verified by Edman degradation: PMID 2197274" /note="ethanolamine ammonia-lyase, light chain; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase, small subunit (light chain)" /protein_id="AAC75493.1" /db_xref="GI:1788781" /db_xref="ASAP:ABE-0008043" /db_xref="UniProtKB/Swiss-Prot:P19636" /db_xref="EcoGene:EG50007" /translation="MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCA LDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRS KDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPD VQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILG AKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVI VDLAKRMLEQKASGINMTR" gene complement(2426836..2428197) /gene="eutB" /locus_tag="b2441" /gene_synonym="ECK2436" /gene_synonym="JW2434" /db_xref="EcoGene:EG50006" CDS complement(2426836..2428197) /gene="eutB" /locus_tag="b2441" /gene_synonym="ECK2436" /gene_synonym="JW2434" /EC_number="4.3.1.7" /function="enzyme; Degradation of small molecules: Amines" /experiment="N-terminus verified by Edman degradation: PMID 2197274" /note="ethanolamine ammonia-lyase, heavy chain; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="ethanolamine ammonia-lyase, large subunit, heavy chain" /protein_id="AAC75494.2" /db_xref="GI:87082106" /db_xref="ASAP:ABE-0008046" /db_xref="UniProtKB/Swiss-Prot:P0AEJ6" /db_xref="EcoGene:EG50006" /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER VAAKQVLSEMTVADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLS DETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSAR LQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNI PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEY LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPS LFF" gene complement(2428209..2429612) /gene="eutA" /locus_tag="b2451" /gene_synonym="ECK2446" /gene_synonym="JW2435" /gene_synonym="yffT" /db_xref="EcoGene:EG14181" CDS complement(2428209..2429612) /gene="eutA" /locus_tag="b2451" /gene_synonym="ECK2446" /gene_synonym="JW2435" /gene_synonym="yffT" /codon_start=1 /transl_table=11 /product="reactivating factor for ethanolamine ammonia lyase" /protein_id="AAC75504.1" /db_xref="GI:1788793" /db_xref="ASAP:ABE-0008079" /db_xref="UniProtKB/Swiss-Prot:P76551" /db_xref="EcoGene:EG14181" /translation="MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKR EISWQSPVFFTPVDKQGGLKEAELKTLILEQYHAAGIEPESVDSGAIIITGESAKTRN ARPAVMALSQSLGDFVVASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANY ALFDAGKISGTACLNVGGRLLETDSHGRVVYAHKPGQMIVDECFGAGTDARSLTGAQL VQVTRRMAELIVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADP FCFADIGPLLATALHDHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQL PLRNLPVAIPIDETDLVGAWQQALIQLDLDPKTDAYVLALPASLPVRYAAVLTVINAL VDFVARFPNPHPLLVVAGQDFGKALGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPL FGGSVVPVTVKSLAFPS" gene complement(2429609..2430835) /gene="eutH" /locus_tag="b2452" /gene_synonym="ECK2447" /gene_synonym="JW2436" /gene_synonym="yffU" /db_xref="EcoGene:EG14182" CDS complement(2429609..2430835) /gene="eutH" /locus_tag="b2452" /gene_synonym="ECK2447" /gene_synonym="JW2436" /gene_synonym="yffU" /function="putative transport; Degradation of small molecules: Amines" /note="ethanolamine utilization; homolog of Salmonella putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="ethanolamine transporter" /protein_id="AAC75505.1" /db_xref="GI:1788794" /db_xref="ASAP:ABE-0008081" /db_xref="UniProtKB/Swiss-Prot:P76552" /db_xref="EcoGene:EG14182" /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGS GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA GIVTIPIGCIAGGLVAMYSGVQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPE KMINGFQIFAKFLVALITLGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEV IGSISCVLLGAYPMVLLLTRWFEKPLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMK QMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV PKEDATATKTEAEAQS" repeat_region 2430867..2431049 /note="REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences" gene complement(2431052..2432239) /gene="eutG" /locus_tag="b2453" /gene_synonym="ECK2448" /gene_synonym="JW2437" /gene_synonym="yffV" /db_xref="EcoGene:EG14183" CDS complement(2431052..2432239) /gene="eutG" /locus_tag="b2453" /gene_synonym="ECK2448" /gene_synonym="JW2437" /gene_synonym="yffV" /function="putative enzyme; Degradation of small molecules: Amines" /note="ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase" /protein_id="AAC75506.2" /db_xref="GI:87082107" /db_xref="ASAP:ABE-0008087" /db_xref="UniProtKB/Swiss-Prot:P76553" /db_xref="EcoGene:EG14183" /translation="MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQA QTRGLKHLFVMADSFLHQAGMTAGLTRSLTVKGIAMTLWPCPVGEPCITDVCAAVAQL RESGCDGVIAFGGGSVLDAAKAVTLLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGT GSETTNVTVIIDAVSGRKQVLAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAI EAYSALNATPFTDSLAIGAIAMIGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAG LGLCHAMAHQPGAALHIPHGLANAMLLPTVMEFNRMVCRERFSQIGRALRTKKSDDRD AINAVSELIAEVGIGKRLGDVGATSAHYGAWAQAALEDICLRSNPRTASLEQIVGLYA AAQ" gene complement(2432229..2433065) /gene="eutJ" /locus_tag="b2454" /gene_synonym="ECK2449" /gene_synonym="JW2438" /gene_synonym="yffW" /db_xref="EcoGene:EG14184" CDS complement(2432229..2433065) /gene="eutJ" /locus_tag="b2454" /gene_synonym="ECK2449" /gene_synonym="JW2438" /gene_synonym="yffW" /function="putative enzyme; Degradation of small molecules: Amines" /note="ethanolamine utilization; homolog of Salmonella gene; GO_process: GO:0009310 - amine catabolic process; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein, HSP70/actin superfamily protein" /protein_id="AAC75507.1" /db_xref="GI:1788796" /db_xref="ASAP:ABE-0008089" /db_xref="UniProtKB/Swiss-Prot:P77277" /db_xref="EcoGene:EG14184" /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP GTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVT YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPAVKPVYEKMADIVARHIE GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY AK" gene complement(2433076..2434479) /gene="eutE" /locus_tag="b2455" /gene_synonym="ECK2450" /gene_synonym="JW2439" /gene_synonym="yffX" /db_xref="EcoGene:EG14185" CDS complement(2433076..2434479) /gene="eutE" /locus_tag="b2455" /gene_synonym="ECK2450" /gene_synonym="JW2439" /gene_synonym="yffX" /function="putative enzyme; Degradation of small molecules: Amines" /note="ethanolamine utilization; similar to acetaldehyde dehydrogenase; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="aldehyde oxidoreductase, ethanolamine utilization protein" /protein_id="AAC75508.1" /db_xref="GI:1788797" /db_xref="ASAP:ABE-0008091" /db_xref="UniProtKB/Swiss-Prot:P77445" /db_xref="EcoGene:EG14185" /translation="MNQQDIEQVVKAVLLKMQSSDTPSAAVHEMGVFASLDDAVAAAK VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAGKIA AAIGLKVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR TFVRLRRCVLVDAFRIV" gene complement(2434491..2434778) /gene="eutN" /locus_tag="b2456" /gene_synonym="cchB" /gene_synonym="ECK2451" /gene_synonym="JW2440" /gene_synonym="yffY" /db_xref="EcoGene:EG14186" CDS complement(2434491..2434778) /gene="eutN" /locus_tag="b2456" /gene_synonym="cchB" /gene_synonym="ECK2451" /gene_synonym="JW2440" /gene_synonym="yffY" /function="phenotype; Not classified" /note="detox protein; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="Ethanolamine catabolic microcompartment shell protein" /protein_id="AAC75509.1" /db_xref="GI:1788798" /db_xref="ASAP:ABE-0008093" /db_xref="UniProtKB/Swiss-Prot:P0AEJ8" /db_xref="EcoGene:EG14186" /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK" gene complement(2434885..2435178) /gene="eutM" /locus_tag="b2457" /gene_synonym="cchA" /gene_synonym="ECK2452" /gene_synonym="JW2441" /gene_synonym="yffZ" /db_xref="EcoGene:EG14187" CDS complement(2434885..2435178) /gene="eutM" /locus_tag="b2457" /gene_synonym="cchA" /gene_synonym="ECK2452" /gene_synonym="JW2441" /gene_synonym="yffZ" /function="phenotype; Not classified" /note="detox protein; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="ethanolamine utilization protein, putative carboxysome structural protein" /protein_id="AAC75510.2" /db_xref="GI:87082108" /db_xref="ASAP:ABE-0008095" /db_xref="UniProtKB/Swiss-Prot:P0ABF4" /db_xref="EcoGene:EG14187" /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL" gene complement(2435217..2436233) /gene="eutD" /locus_tag="b2458" /gene_synonym="ECK2453" /gene_synonym="eutI" /gene_synonym="JW2442" /gene_synonym="ypfA" /db_xref="EcoGene:EG14188" CDS complement(2435217..2436233) /gene="eutD" /locus_tag="b2458" /gene_synonym="ECK2453" /gene_synonym="eutI" /gene_synonym="JW2442" /gene_synonym="ypfA" /function="putative enzyme; Degradation of small molecules: Amines" /note="ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase; GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /protein_id="AAC75511.1" /db_xref="GI:1788800" /db_xref="ASAP:ABE-0008097" /db_xref="UniProtKB/Swiss-Prot:P77218" /db_xref="EcoGene:EG14188" /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGP ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG YKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ TLVE" gene complement(2436230..2437033) /gene="eutT" /locus_tag="b2459" /gene_synonym="ECK2454" /gene_synonym="JW2443" /gene_synonym="ypfB" /db_xref="EcoGene:EG14189" CDS complement(2436230..2437033) /gene="eutT" /locus_tag="b2459" /gene_synonym="ECK2454" /gene_synonym="JW2443" /gene_synonym="ypfB" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="cobalamin adenosyltransferase involved in ethanolamine utilization" /protein_id="AAC75512.1" /db_xref="GI:1788801" /db_xref="ASAP:ABE-0008100" /db_xref="UniProtKB/Swiss-Prot:P65643" /db_xref="EcoGene:EG14189" /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR IKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC QAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVF ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQ" gene complement(2437030..2437731) /gene="eutQ" /locus_tag="b2460" /gene_synonym="ECK2455" /gene_synonym="JW2444" /gene_synonym="ypfC" /db_xref="EcoGene:EG14190" CDS complement(2437030..2437731) /gene="eutQ" /locus_tag="b2460" /gene_synonym="ECK2455" /gene_synonym="JW2444" /gene_synonym="ypfC" /function="putative enzyme; Not classified" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="RmlC-like cupin domain protein" /protein_id="AAC75513.1" /db_xref="GI:1788802" /db_xref="ASAP:ABE-0008102" /db_xref="UniProtKB/Swiss-Prot:P76555" /db_xref="EcoGene:EG14190" /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG FMQWENAFFPWTLNYDEIDMVLEGELHVRHEGQTMIAKAGDVMFIPKGSSIEFGTTSS VKFLYVAWPANWQSL" gene complement(2437706..2438185) /gene="eutP" /locus_tag="b2461" /gene_synonym="ECK2456" /gene_synonym="JW2445" /gene_synonym="ypfD" /db_xref="EcoGene:EG14191" CDS complement(2437706..2438185) /gene="eutP" /locus_tag="b2461" /gene_synonym="ECK2456" /gene_synonym="JW2445" /gene_synonym="ypfD" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="putative P-loop NTPase ethanolamine utilization protein" /protein_id="AAC75514.1" /db_xref="GI:1788803" /db_xref="ASAP:ABE-0008105" /db_xref="UniProtKB/Swiss-Prot:P76556" /db_xref="EcoGene:EG14191" /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT PGEYFNHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD MPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE" gene complement(2438198..2438533) /gene="eutS" /locus_tag="b2462" /gene_synonym="ECK2457" /gene_synonym="JW2446" /gene_synonym="ypfE" /db_xref="EcoGene:EG14192" CDS complement(2438198..2438533) /gene="eutS" /locus_tag="b2462" /gene_synonym="ECK2457" /gene_synonym="JW2446" /gene_synonym="ypfE" /note="GO_process: GO:0009310 - amine catabolic process" /codon_start=1 /transl_table=11 /product="putative ethanol utilization carboxysome structural protein" /protein_id="AAC75515.2" /db_xref="GI:87082109" /db_xref="ASAP:ABE-0008108" /db_xref="UniProtKB/Swiss-Prot:P63746" /db_xref="EcoGene:EG14192" /translation="MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN YTLCEMTKS" gene complement(2438826..2441105) /gene="maeB" /locus_tag="b2463" /gene_synonym="ECK2458" /gene_synonym="JW2447" /gene_synonym="ypfF" /db_xref="EcoGene:EG14193" CDS complement(2438826..2441105) /gene="maeB" /locus_tag="b2463" /gene_synonym="ECK2458" /gene_synonym="JW2447" /gene_synonym="ypfF" /function="putative enzyme; Not classified" /note="putative multimodular enzyme" /codon_start=1 /transl_table=11 /product="malic enzyme: putative oxidoreductase/phosphotransacetylase" /protein_id="AAC75516.1" /db_xref="GI:1788806" /db_xref="ASAP:ABE-0008111" /db_xref="UniProtKB/Swiss-Prot:P76558" /db_xref="EcoGene:EG14193" /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG EEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG IEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAPELMIDGEMHGDAALVEAIRNDR MPDSSLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV RRIVNMVALAVVEAQTQPL" gene 2441394..2442344 /gene="talA" /locus_tag="b2464" /gene_synonym="ECK2459" /gene_synonym="JW2448" /db_xref="EcoGene:EG11797" CDS 2441394..2442344 /gene="talA" /locus_tag="b2464" /gene_synonym="ECK2459" /gene_synonym="JW2448" /EC_number="2.2.1.2" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="transaldolase A" /protein_id="AAC75517.1" /db_xref="GI:1788807" /db_xref="ASAP:ABE-0008115" /db_xref="UniProtKB/Swiss-Prot:P0A867" /db_xref="EcoGene:EG11797" /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSF AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL" gene 2442364..2444367 /gene="tktB" /locus_tag="b2465" /gene_synonym="ECK2460" /gene_synonym="JW2449" /db_xref="EcoGene:EG12100" CDS 2442364..2444367 /gene="tktB" /locus_tag="b2465" /gene_synonym="ECK2460" /gene_synonym="JW2449" /EC_number="2.2.1.1" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="transketolase 2 isozyme; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="transketolase 2, thiamine triphosphate-binding" /protein_id="AAC75518.1" /db_xref="GI:1788808" /db_xref="ASAP:ABE-0008117" /db_xref="UniProtKB/Swiss-Prot:P33570" /db_xref="EcoGene:EG12100" /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL KHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK DWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGS VSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALM KARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVER HNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQA AEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGL KGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA" repeat_region 2444376..2444444 /note="REP179 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2444462..2445505) /gene="ypfG" /locus_tag="b2466" /gene_synonym="ECK2461" /gene_synonym="JW2450" /db_xref="EcoGene:EG14194" CDS complement(2444462..2445505) /gene="ypfG" /locus_tag="b2466" /gene_synonym="ECK2461" /gene_synonym="JW2450" /codon_start=1 /transl_table=11 /product="DUF1176 family protein" /protein_id="AAC75519.1" /db_xref="GI:1788809" /db_xref="ASAP:ABE-0008120" /db_xref="UniProtKB/Swiss-Prot:P76559" /db_xref="EcoGene:EG14194" /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDK WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVG SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQ ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW HGPDAWPTLWITR" gene complement(2445631..2446206) /gene="nudK" /locus_tag="b2467" /gene_synonym="ECK2462" /gene_synonym="JW2451" /gene_synonym="yffH" /db_xref="EcoGene:EG12410" CDS complement(2445631..2446206) /gene="nudK" /locus_tag="b2467" /gene_synonym="ECK2462" /gene_synonym="JW2451" /gene_synonym="yffH" /codon_start=1 /transl_table=11 /product="GDP-mannose pyrophosphatase" /protein_id="AAC75520.1" /db_xref="GI:1788810" /db_xref="ASAP:ABE-0008123" /db_xref="UniProtKB/Swiss-Prot:P37128" /db_xref="EcoGene:EG12410" /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAI EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD" gene complement(2446274..2448253) /gene="aegA" /locus_tag="b2468" /gene_synonym="ECK2463" /gene_synonym="JW2452" /gene_synonym="yffG" /db_xref="EcoGene:EG12409" CDS complement(2446274..2448253) /gene="aegA" /locus_tag="b2468" /gene_synonym="ECK2463" /gene_synonym="JW2452" /gene_synonym="yffG" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit" /protein_id="AAC75521.1" /db_xref="GI:1788811" /db_xref="ASAP:ABE-0008127" /db_xref="UniProtKB/Swiss-Prot:P37127" /db_xref="EcoGene:EG12409" /translation="MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITV IKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTM QIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRAD QAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITG RVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIG AGPAGLACADVLTRNGVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGI HFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK QVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPG SKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEG SEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGG DAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH" gene 2448459..2450159 /gene="narQ" /locus_tag="b2469" /gene_synonym="ECK2464" /gene_synonym="JW2453" /db_xref="EcoGene:EG11460" CDS 2448459..2450159 /gene="narQ" /locus_tag="b2469" /gene_synonym="ECK2464" /gene_synonym="JW2453" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with NarP" /protein_id="AAC75522.1" /db_xref="GI:1788812" /db_xref="ASAP:ABE-0008132" /db_xref="UniProtKB/Swiss-Prot:P27896" /db_xref="EcoGene:EG11460" /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQM SSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN SVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM " gene 2450323..2453436 /gene="acrD" /locus_tag="b2470" /gene_synonym="ECK2465" /gene_synonym="JW2454" /gene_synonym="yffA" /db_xref="EcoGene:EG10014" CDS 2450323..2453436 /gene="acrD" /locus_tag="b2470" /gene_synonym="ECK2465" /gene_synonym="JW2454" /gene_synonym="yffA" /function="putative transport; Drug/analog sensitivity" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="aminoglycoside/multidrug efflux system" /protein_id="AAC75523.1" /db_xref="GI:1788814" /db_xref="ASAP:ABE-0008136" /db_xref="UniProtKB/Swiss-Prot:P24177" /db_xref="EcoGene:EG10014" /translation="MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVR VTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDE AVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQ LGGTPSVDKQALNATINAQSLLQTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYD YLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVK ASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNT LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS AVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQ KGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLE DRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVA RMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDME LQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVA IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVP FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLE WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT WMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPI LMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF PLKPRPE" gene complement(2453535..2453594) /gene="ypfM" /locus_tag="b4606" /gene_synonym="ECK4415" /db_xref="EcoGene:EG14396" CDS complement(2453535..2453594) /gene="ypfM" /locus_tag="b4606" /gene_synonym="ECK4415" /codon_start=1 /transl_table=11 /product="stress-induced small enterobacterial protein" /protein_id="ABP93450.1" /db_xref="GI:145693170" /db_xref="UniProtKB/Swiss-Prot:A5A621" /db_xref="EcoGene:EG14396" /translation="MIERELGNWKDFIEVMLRK" gene 2453975..2454331 /gene="yffB" /locus_tag="b2471" /gene_synonym="ECK2466" /gene_synonym="JW2455" /db_xref="EcoGene:EG11147" CDS 2453975..2454331 /gene="yffB" /locus_tag="b2471" /gene_synonym="ECK2466" /gene_synonym="JW2455" /codon_start=1 /transl_table=11 /product="putative ArsC family reductase" /protein_id="AAC75524.1" /db_xref="GI:1788815" /db_xref="ASAP:ABE-0008140" /db_xref="UniProtKB/Swiss-Prot:P24178" /db_xref="EcoGene:EG11147" /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLND FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCVPGKPM LLGFSDSSYQQFFHEV" gene 2454335..2455462 /gene="dapE" /locus_tag="b2472" /gene_synonym="ECK2467" /gene_synonym="JW2456" /gene_synonym="msgB" /db_xref="EcoGene:EG10208" CDS 2454335..2455462 /gene="dapE" /locus_tag="b2472" /gene_synonym="ECK2467" /gene_synonym="JW2456" /gene_synonym="msgB" /EC_number="3.5.1.18" /function="enzyme; Amino acid biosynthesis: Lysine" /note="GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="N-succinyl-diaminopimelate deacylase" /protein_id="AAC75525.1" /db_xref="GI:1788816" /db_xref="ASAP:ABE-0008142" /db_xref="UniProtKB/Swiss-Prot:P0AED7" /db_xref="EcoGene:EG10208" /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA" gene 2455490..2455690 /gene="ypfN" /locus_tag="b4547" /gene_synonym="ECK2468" /gene_synonym="JW2457" /db_xref="EcoGene:EG14399" CDS 2455490..2455690 /gene="ypfN" /locus_tag="b4547" /gene_synonym="ECK2468" /gene_synonym="JW2457" /note="GO_component: GO:0031225 - anchored to membrane" /codon_start=1 /transl_table=11 /product="putative membrane protein, UPF0370 family" /protein_id="ABD18697.1" /db_xref="GI:87082110" /db_xref="ASAP:ABE-0285068" /db_xref="UniProtKB/Swiss-Prot:Q2EET2" /db_xref="EcoGene:EG14399" /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP HRDFNDKWDDDDDWPKKDQPKK" repeat_region 2455706..2455788 /note="REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2455800..2456498) /gene="ypfH" /locus_tag="b2473" /gene_synonym="ECK2469" /gene_synonym="JW5396" /db_xref="EcoGene:EG14195" CDS complement(2455800..2456498) /gene="ypfH" /locus_tag="b2473" /gene_synonym="ECK2469" /gene_synonym="JW5396" /codon_start=1 /transl_table=11 /product="palmitoyl-CoA esterase activity, uncertain physiological substrate" /protein_id="AAC75526.2" /db_xref="GI:87082111" /db_xref="ASAP:ABE-0008145" /db_xref="UniProtKB/Swiss-Prot:P76561" /db_xref="EcoGene:EG14195" /translation="MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFP DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA NATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL SGGKPGDDDVIEMM" gene complement(2456572..2458587) /gene="tmcA" /locus_tag="b2474" /gene_synonym="ECK2470" /gene_synonym="JW2459" /gene_synonym="ypfI" /db_xref="EcoGene:EG14196" CDS complement(2456572..2458587) /gene="tmcA" /locus_tag="b2474" /gene_synonym="ECK2470" /gene_synonym="JW2459" /gene_synonym="ypfI" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="elongator methionine tRNA (ac4C34) acetyltransferase" /protein_id="AAC75527.1" /db_xref="GI:1788818" /db_xref="ASAP:ABE-0008150" /db_xref="UniProtKB/Swiss-Prot:P76562" /db_xref="EcoGene:EG14196" /translation="MAELTALHTLTAQMKREGIRRLLVLSGEEGWCFEHTLKLRDALP GDWLWISPRPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNEAILWRQNQPFSL AHFTPRTDWYPATGAPQPEQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRIAG RAIVTAPAKASTDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL VFDDENFTHTPQGNIVISAFEQTLWQSDPETPLKVYQLLSGAHYRTSPLDLRRMMDAP GQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLA ATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQDLDYLSVSFGYTGELWRFWQRCG FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD PLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ LCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQLFH" gene complement(2458602..2459465) /gene="ypfJ" /locus_tag="b2475" /gene_synonym="ECK2471" /gene_synonym="JW2460" /db_xref="EcoGene:EG14197" CDS complement(2458602..2459465) /gene="ypfJ" /locus_tag="b2475" /gene_synonym="ECK2471" /gene_synonym="JW2460" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative neutral zinc metallopeptidase" /protein_id="AAC75528.1" /db_xref="GI:1788819" /db_xref="ASAP:ABE-0008153" /db_xref="UniProtKB/Swiss-Prot:P64429" /db_xref="EcoGene:EG14197" /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQ QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD PAQCNTFGKSI" gene complement(2459633..2460346) /gene="purC" /locus_tag="b2476" /gene_synonym="ade" /gene_synonym="ECK2472" /gene_synonym="JW2461" /db_xref="EcoGene:EG10791" CDS complement(2459633..2460346) /gene="purC" /locus_tag="b2476" /gene_synonym="ade" /gene_synonym="ECK2472" /gene_synonym="JW2461" /EC_number="6.3.2.6" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2120198,9298646" /note="phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthetase" /protein_id="AAC75529.1" /db_xref="GI:1788820" /db_xref="ASAP:ABE-0008156" /db_xref="UniProtKB/Swiss-Prot:P0A7D7" /db_xref="EcoGene:EG10791" /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL GGLIEAYEAVARRLGVQLD" repeat_region 2460401..2460446 /note="REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2460559..2461593) /gene="bamC" /locus_tag="b2477" /gene_synonym="dapX" /gene_synonym="ECK2473" /gene_synonym="JW2462" /gene_synonym="nlpB" /db_xref="EcoGene:EG10658" CDS complement(2460559..2461593) /gene="bamC" /locus_tag="b2477" /gene_synonym="dapX" /gene_synonym="ECK2473" /gene_synonym="JW2462" /gene_synonym="nlpB" /function="membrane; Macromolecule synthesis, modification: Lipoprotein" /note="lipoprotein-34; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="BamABCDE complex OM biogenesis lipoprotein" /protein_id="AAC75530.2" /db_xref="GI:87082112" /db_xref="ASAP:ABE-0008161" /db_xref="UniProtKB/Swiss-Prot:P0A903" /db_xref="EcoGene:EG10658" /translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEA APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGD TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAAN AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL VAVFQAAFSK" gene complement(2461610..2462488) /gene="dapA" /locus_tag="b2478" /gene_synonym="ECK2474" /gene_synonym="JW2463" /db_xref="EcoGene:EG10205" CDS complement(2461610..2462488) /gene="dapA" /locus_tag="b2478" /gene_synonym="ECK2474" /gene_synonym="JW2463" /EC_number="4.3.3.7" /function="enzyme; Amino acid biosynthesis: Lysine" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthase" /protein_id="AAC75531.1" /db_xref="GI:1788823" /db_xref="ASAP:ABE-0008163" /db_xref="UniProtKB/Swiss-Prot:P0A6L2" /db_xref="EcoGene:EG10205" /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD SGRETVRAALKHAGLL" gene 2462634..2463206 /gene="gcvR" /locus_tag="b2479" /gene_synonym="ECK2475" /gene_synonym="JW2464" /gene_synonym="yffD" /db_xref="EcoGene:EG11149" CDS 2462634..2463206 /gene="gcvR" /locus_tag="b2479" /gene_synonym="ECK2475" /gene_synonym="JW2464" /gene_synonym="yffD" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="transcriptional regulation of gcv operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor, regulatory protein accessory to GcvA" /protein_id="AAC75532.2" /db_xref="GI:87082113" /db_xref="ASAP:ABE-0008168" /db_xref="UniProtKB/Swiss-Prot:P0A9I3" /db_xref="EcoGene:EG11149" /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ AFKALCTELNAQGSINVVNYSQHDEQDGVK" gene 2463206..2463676 /gene="bcp" /locus_tag="b2480" /gene_synonym="ECK2476" /gene_synonym="JW2465" /db_xref="EcoGene:EG10108" CDS 2463206..2463676 /gene="bcp" /locus_tag="b2480" /gene_synonym="ECK2476" /gene_synonym="JW2465" /EC_number="1.11.1.-" /EC_number="1.11.1.7" /function="phenotype; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9740056" /note="bacterioferritin comigratory protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="peroxiredoxin; thiol peroxidase, thioredoxin-dependent" /protein_id="AAC75533.1" /db_xref="GI:1788825" /db_xref="ASAP:ABE-0008171" /db_xref="UniProtKB/Swiss-Prot:P0AE52" /db_xref="EcoGene:EG10108" /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA" gene 2463929..2464546 /gene="hyfA" /locus_tag="b2481" /gene_synonym="ECK2477" /gene_synonym="JW2466" /gene_synonym="yffE" /db_xref="EcoGene:EG11150" CDS 2463929..2464546 /gene="hyfA" /locus_tag="b2481" /gene_synonym="ECK2477" /gene_synonym="JW2466" /gene_synonym="yffE" /EC_number="1.-.-.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 Fe-S subunit; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, 4Fe-4S subunit" /protein_id="AAC75534.2" /db_xref="GI:87082114" /db_xref="ASAP:ABE-0008179" /db_xref="UniProtKB/Swiss-Prot:P23481" /db_xref="EcoGene:EG11150" /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST ITAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGS RPVNAHAQYVFQAEGSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVR ACPNQALRLITGDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQR" gene 2464546..2466564 /gene="hyfB" /locus_tag="b2482" /gene_synonym="ECK2478" /gene_synonym="JW2467" /gene_synonym="yffF" /db_xref="EcoGene:EG11282" CDS 2464546..2466564 /gene="hyfB" /locus_tag="b2482" /gene_synonym="ECK2478" /gene_synonym="JW2467" /gene_synonym="yffF" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 membrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, membrane subunit" /protein_id="AAC75535.1" /db_xref="GI:1788827" /db_xref="ASAP:ABE-0008181" /db_xref="UniProtKB/Swiss-Prot:P23482" /db_xref="EcoGene:EG11282" /translation="MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGV IGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY MREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGF GAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLT VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGC LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN TPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW ACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV" gene 2466575..2467522 /gene="hyfC" /locus_tag="b2483" /gene_synonym="ECK2479" /gene_synonym="JW2468" /db_xref="EcoGene:EG14211" CDS 2466575..2467522 /gene="hyfC" /locus_tag="b2483" /gene_synonym="ECK2479" /gene_synonym="JW2468" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 membrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, membrane subunit" /protein_id="AAC75536.2" /db_xref="GI:87082115" /db_xref="ASAP:ABE-0008183" /db_xref="UniProtKB/Swiss-Prot:P77858" /db_xref="EcoGene:EG14211" /translation="MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRG PGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA GSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE YSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL" gene 2467539..2468978 /gene="hyfD" /locus_tag="b2484" /gene_synonym="ECK2480" /gene_synonym="JW2469" /db_xref="EcoGene:EG14212" CDS 2467539..2468978 /gene="hyfD" /locus_tag="b2484" /gene_synonym="ECK2480" /gene_synonym="JW2469" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 membrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, membrane subunit" /protein_id="AAC75537.1" /db_xref="GI:1788829" /db_xref="ASAP:ABE-0008185" /db_xref="UniProtKB/Swiss-Prot:P77416" /db_xref="EcoGene:EG14212" /translation="MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLS LISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTD KNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDK AQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAW GKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGM VMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIV NHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGF FSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAA PLPGSMRLVLIVLIVMSLISSVIAATWLQ" gene 2468990..2469640 /gene="hyfE" /locus_tag="b2485" /gene_synonym="ECK2481" /gene_synonym="JW2470" /db_xref="EcoGene:EG14213" CDS 2468990..2469640 /gene="hyfE" /locus_tag="b2485" /gene_synonym="ECK2481" /gene_synonym="JW2470" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 membrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, membrane subunit" /protein_id="AAC75538.1" /db_xref="GI:1788830" /db_xref="ASAP:ABE-0008188" /db_xref="UniProtKB/Swiss-Prot:P0AEW1" /db_xref="EcoGene:EG14213" /translation="MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG" gene 2469645..2471225 /gene="hyfF" /locus_tag="b2486" /gene_synonym="ECK2482" /gene_synonym="JW2471" /db_xref="EcoGene:EG14214" CDS 2469645..2471225 /gene="hyfF" /locus_tag="b2486" /gene_synonym="ECK2482" /gene_synonym="JW2471" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 membrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, membrane subunit" /protein_id="AAC75539.1" /db_xref="GI:1788831" /db_xref="ASAP:ABE-0008191" /db_xref="UniProtKB/Swiss-Prot:P77437" /db_xref="EcoGene:EG14214" /translation="MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGIT LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEV AHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS SLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM LLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL ALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW HDFLPSGTASVSEKHSER" gene 2471215..2472882 /gene="hyfG" /locus_tag="b2487" /gene_synonym="ECK2483" /gene_synonym="JW2472" /db_xref="EcoGene:EG14215" CDS 2471215..2472882 /gene="hyfG" /locus_tag="b2487" /gene_synonym="ECK2483" /gene_synonym="JW2472" /EC_number="1.-.-.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 subunit; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, subunit" /protein_id="AAC75540.1" /db_xref="GI:1788832" /db_xref="ASAP:ABE-0008194" /db_xref="UniProtKB/Swiss-Prot:P77329" /db_xref="EcoGene:EG14215" /translation="MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL LPDVVQYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRL RPEPTTDSETYPFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGG VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDLRFD HPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSY KPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAP LIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRNRSPLK" gene 2472892..2473437 /gene="hyfH" /locus_tag="b2488" /gene_synonym="ECK2484" /gene_synonym="JW2473" /db_xref="EcoGene:EG14216" CDS 2472892..2473437 /gene="hyfH" /locus_tag="b2488" /gene_synonym="ECK2484" /gene_synonym="JW2473" /EC_number="1.-.-.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 Fe-S subunit; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, Fe-S subunit" /protein_id="AAC75541.1" /db_xref="GI:1788833" /db_xref="ASAP:ABE-0008196" /db_xref="UniProtKB/Swiss-Prot:P77423" /db_xref="EcoGene:EG14216" /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG ACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN KADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPEC KQRATLINDDTDVLLVAKEQL" gene 2473434..2474192 /gene="hyfI" /locus_tag="b2489" /gene_synonym="ECK2485" /gene_synonym="JW5805" /db_xref="EcoGene:EG14217" CDS 2473434..2474192 /gene="hyfI" /locus_tag="b2489" /gene_synonym="ECK2485" /gene_synonym="JW5805" /EC_number="1.-.-.-" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase 4 Fe-S subunit; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 4, Fe-S subunit" /protein_id="AAC75542.1" /db_xref="GI:1788834" /db_xref="ASAP:ABE-0008198" /db_xref="UniProtKB/Swiss-Prot:P77668" /db_xref="EcoGene:EG14217" /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD" gene 2474185..2474598 /gene="hyfJ" /locus_tag="b2490" /gene_synonym="ECK2486" /gene_synonym="JW2475" /db_xref="EcoGene:EG14218" CDS 2474185..2474598 /gene="hyfJ" /locus_tag="b2490" /gene_synonym="ECK2486" /gene_synonym="JW2475" /function="putative factor; Not classified" /note="GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="putative processing element hydrogenase 4" /protein_id="AAC75543.2" /db_xref="GI:87082116" /db_xref="ASAP:ABE-0008200" /db_xref="UniProtKB/Swiss-Prot:P77453" /db_xref="EcoGene:EG14218" /translation="MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGV IDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLA DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA" gene 2474628..2476640 /gene="hyfR" /locus_tag="b2491" /gene_synonym="ECK2487" /gene_synonym="JW2476" /db_xref="EcoGene:EG14219" CDS 2474628..2476640 /gene="hyfR" /locus_tag="b2491" /gene_synonym="ECK2487" /gene_synonym="JW2476" /function="putative regulator; Not classified" /note="putative 2-component regulator, interaction with sigma 54; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="hydrogenase-4 transcriptional activator" /protein_id="AAC75544.2" /db_xref="GI:87082117" /db_xref="ASAP:ABE-0008204" /db_xref="UniProtKB/Swiss-Prot:P71229" /db_xref="EcoGene:EG14219" /translation="MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPL PPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAEL RFIRTHGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDI TNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACL PRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPLTFGN HTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQESLQQENHQL SEQLLSNLGIGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLS PRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGD LPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRL NVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRE LENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEER QRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL" gene 2476662..2477510 /gene="focB" /locus_tag="b2492" /gene_synonym="ECK2488" /gene_synonym="JW2477" /db_xref="EcoGene:EG14220" CDS 2476662..2477510 /gene="focB" /locus_tag="b2492" /gene_synonym="ECK2488" /gene_synonym="JW2477" /function="putative transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="probable formate transporter (formate channel 2); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative formate transporter" /protein_id="AAC75545.1" /db_xref="GI:1788837" /db_xref="ASAP:ABE-0008206" /db_xref="UniProtKB/Swiss-Prot:P77733" /db_xref="EcoGene:EG14220" /translation="MRNKLSFDLQLSARKAAIAERIAAHKIARSKVSVFLMAMSAGVF MAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRG VISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTF TESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPF AIAIRHFAPPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNIIGGAVLVSMCYRAI YLRQEP" gene complement(2477548..2478609) /gene="yfgO" /locus_tag="b2493" /gene_synonym="ECK2489" /gene_synonym="JW2478" /gene_synonym="perM" /db_xref="EcoGene:EG14221" CDS complement(2477548..2478609) /gene="yfgO" /locus_tag="b2493" /gene_synonym="ECK2489" /gene_synonym="JW2478" /gene_synonym="perM" /function="putative transport; Not classified" /note="putative permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative UPF0118 family inner membrane permease" /protein_id="AAC75546.1" /db_xref="GI:1788838" /db_xref="ASAP:ABE-0008208" /db_xref="UniProtKB/Swiss-Prot:P0AFI9" /db_xref="EcoGene:EG14221" /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL ATLIKAVIHAWPDGQIAQE" gene 2478822..2480285 /gene="bepA" /locus_tag="b2494" /gene_synonym="ECK2490" /gene_synonym="JW2479" /gene_synonym="yfgC" /db_xref="EcoGene:EG14199" CDS 2478822..2480285 /gene="bepA" /locus_tag="b2494" /gene_synonym="ECK2490" /gene_synonym="JW2479" /gene_synonym="yfgC" /codon_start=1 /transl_table=11 /product="OM protein maintenance and assembly metalloprotease and chaperone, periplasmic" /protein_id="AAC75547.1" /db_xref="GI:1788840" /db_xref="ASAP:ABE-0008212" /db_xref="UniProtKB/Swiss-Prot:P66948" /db_xref="EcoGene:EG14199" /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTL SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLT WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM" gene 2480306..2480665 /gene="yfgD" /locus_tag="b2495" /gene_synonym="ECK2491" /gene_synonym="JW2480" /db_xref="EcoGene:EG14200" CDS 2480306..2480665 /gene="yfgD" /locus_tag="b2495" /gene_synonym="ECK2491" /gene_synonym="JW2480" /function="putative enzyme; Not classified" /note="GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC75548.1" /db_xref="GI:1788841" /db_xref="ASAP:ABE-0008214" /db_xref="UniProtKB/Swiss-Prot:P76569" /db_xref="EcoGene:EG14200" /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT LRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN GKARIGRPPEQVLEIVG" repeat_region 2480696..2480732 /note="REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2480803..2481504) /gene="hda" /locus_tag="b2496" /gene_synonym="ECK2492" /gene_synonym="idaB" /gene_synonym="JW5397" /gene_synonym="yfgE" /db_xref="EcoGene:EG14201" CDS complement(2480803..2481504) /gene="hda" /locus_tag="b2496" /gene_synonym="ECK2492" /gene_synonym="idaB" /gene_synonym="JW5397" /gene_synonym="yfgE" /function="putative factor; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 18977760" /note="putative DNA replication factor; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="ATPase regulatory factor involved in DnaA inactivation" /protein_id="AAC75549.2" /db_xref="GI:226510964" /db_xref="ASAP:ABE-0008217" /db_xref="UniProtKB/Swiss-Prot:P69931" /db_xref="EcoGene:EG14201" /translation="MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSG YIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCID NIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIY KLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITA QRKLTIPFVKEILKL" gene complement(2481599..2482888) /gene="uraA" /locus_tag="b2497" /gene_synonym="ECK2493" /gene_synonym="JW2482" /db_xref="EcoGene:EG12129" CDS complement(2481599..2482888) /gene="uraA" /locus_tag="b2497" /gene_synonym="ECK2493" /gene_synonym="JW2482" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="uracil transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="uracil permease" /protein_id="AAC75550.1" /db_xref="GI:1788843" /db_xref="ASAP:ABE-0008219" /db_xref="UniProtKB/Swiss-Prot:P0AGM7" /db_xref="EcoGene:EG12129" /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM ALATIVGIGLSLIFKLISVLRPEEVVLDAEDADITDK" gene complement(2482974..2483600) /gene="upp" /locus_tag="b2498" /gene_synonym="ECK2494" /gene_synonym="JW2483" /gene_synonym="uraP" /db_xref="EcoGene:EG11332" CDS complement(2482974..2483600) /gene="upp" /locus_tag="b2498" /gene_synonym="ECK2494" /gene_synonym="JW2483" /gene_synonym="uraP" /EC_number="2.4.2.9" /function="enzyme; Salvage of nucleosides and nucleotides" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="AAC75551.2" /db_xref="GI:87082118" /db_xref="ASAP:ABE-0008224" /db_xref="UniProtKB/Swiss-Prot:P0A8F0" /db_xref="EcoGene:EG11332" /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK" gene 2483925..2484962 /gene="purM" /locus_tag="b2499" /gene_synonym="ECK2495" /gene_synonym="JW2484" /gene_synonym="purG" /gene_synonym="purI" /db_xref="EcoGene:EG10798" CDS 2483925..2484962 /gene="purM" /locus_tag="b2499" /gene_synonym="ECK2495" /gene_synonym="JW2484" /gene_synonym="purG" /gene_synonym="purI" /EC_number="6.3.3.1" /function="enzyme; Purine ribonucleotide biosynthesis" /note="phosphoribosylaminoimidazole synthetase = AIR synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole synthetase" /protein_id="AAC75552.1" /db_xref="GI:1788845" /db_xref="ASAP:ABE-0008230" /db_xref="UniProtKB/Swiss-Prot:P08178" /db_xref="EcoGene:EG10798" /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW PEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK ASDSEQRVVIE" gene 2484962..2485600 /gene="purN" /locus_tag="b2500" /gene_synonym="ade" /gene_synonym="ECK2496" /gene_synonym="JW2485" /db_xref="EcoGene:EG10799" CDS 2484962..2485600 /gene="purN" /locus_tag="b2500" /gene_synonym="ade" /gene_synonym="ECK2496" /gene_synonym="JW2485" /EC_number="2.1.2.2" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2204419" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase 1" /protein_id="AAC75553.1" /db_xref="GI:1788846" /db_xref="ASAP:ABE-0008232" /db_xref="UniProtKB/Swiss-Prot:P08179" /db_xref="EcoGene:EG10799" /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE" gene 2485772..2487838 /gene="ppk" /locus_tag="b2501" /gene_synonym="ECK2497" /gene_synonym="JW2486" /db_xref="EcoGene:EG11510" CDS 2485772..2487838 /gene="ppk" /locus_tag="b2501" /gene_synonym="ECK2497" /gene_synonym="JW2486" /EC_number="2.7.4.1" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /note="polyphosphate kinase; GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="polyphosphate kinase, component of RNA degradosome" /protein_id="AAC75554.1" /db_xref="GI:1788847" /db_xref="ASAP:ABE-0008235" /db_xref="UniProtKB/Swiss-Prot:P0A7B1" /db_xref="EcoGene:EG11510" /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM CSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV ATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK SLEQPE" gene 2487843..2489384 /gene="ppx" /locus_tag="b2502" /gene_synonym="ECK2498" /gene_synonym="JW2487" /db_xref="EcoGene:EG11403" CDS 2487843..2489384 /gene="ppx" /locus_tag="b2502" /gene_synonym="ECK2498" /gene_synonym="JW2487" /EC_number="3.6.1.11" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /note="GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="exopolyphosphatase" /protein_id="AAC75555.1" /db_xref="GI:1788848" /db_xref="ASAP:ABE-0008238" /db_xref="UniProtKB/Swiss-Prot:P0AFL6" /db_xref="EcoGene:EG11403" /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST PEIAA" gene complement(2489423..2491666) /gene="yfgF" /locus_tag="b2503" /gene_synonym="ECK2499" /gene_synonym="JW2488" /db_xref="EcoGene:EG14202" CDS complement(2489423..2491666) /gene="yfgF" /locus_tag="b2503" /gene_synonym="ECK2499" /gene_synonym="JW2488" /function="enzyme; Not classified" /note="putative cytochrome C-type biogenesis protein" /codon_start=1 /transl_table=11 /product="cyclic-di-GMP phosphodiesterase, anaerobic" /protein_id="AAC75556.1" /db_xref="GI:1788849" /db_xref="ASAP:ABE-0008240" /db_xref="UniProtKB/Swiss-Prot:P77172" /db_xref="EcoGene:EG14202" /translation="MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVF LFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGG YRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMP FNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFAL WLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMI SIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDP VVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLE PGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRS PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNH FFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTL QFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALT NVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLD YQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEI EPIRESA" gene 2492018..2492209 /gene="yfgG" /locus_tag="b2504" /gene_synonym="ECK2500" /gene_synonym="JW5399" /db_xref="EcoGene:EG14203" CDS 2492018..2492209 /gene="yfgG" /locus_tag="b2504" /gene_synonym="ECK2500" /gene_synonym="JW5399" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75557.1" /db_xref="GI:1788851" /db_xref="ASAP:ABE-0008247" /db_xref="UniProtKB/Swiss-Prot:P64545" /db_xref="EcoGene:EG14203" /translation="MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHH QSKKEAQQSTLSVESPVQR" gene 2492520..2493038 /gene="yfgH" /locus_tag="b2505" /gene_synonym="ECK2501" /gene_synonym="JW5400" /db_xref="EcoGene:EG14204" CDS 2492520..2493038 /gene="yfgH" /locus_tag="b2505" /gene_synonym="ECK2501" /gene_synonym="JW5400" /function="putative membrane; Not classified" /note="putative outer membrane lipoprotein; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane integrity lipoprotein" /protein_id="AAC75558.1" /db_xref="GI:1788852" /db_xref="ASAP:ABE-0008250" /db_xref="UniProtKB/Swiss-Prot:P65290" /db_xref="EcoGene:EG14204" /translation="MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQE TKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVG GGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNET RIQPNTKCPEKS" gene 2493054..2493593 /gene="yfgI" /locus_tag="b2506" /gene_synonym="ECK2502" /gene_synonym="JW2490" /db_xref="EcoGene:EG14205" CDS 2493054..2493593 /gene="yfgI" /locus_tag="b2506" /gene_synonym="ECK2502" /gene_synonym="JW2490" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="nalidixic acid resistance protein, putative periplasmic protein" /protein_id="AAC75559.1" /db_xref="GI:1788853" /db_xref="ASAP:ABE-0008252" /db_xref="UniProtKB/Swiss-Prot:P76573" /db_xref="EcoGene:EG14205" /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH DEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYE DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR DLMKSVGKAEENKSDSWFN" gene complement(2493686..2495263) /gene="guaA" /locus_tag="b2507" /gene_synonym="ECK2503" /gene_synonym="JW2491" /db_xref="EcoGene:EG10420" CDS complement(2493686..2495263) /gene="guaA" /locus_tag="b2507" /gene_synonym="ECK2503" /gene_synonym="JW2491" /EC_number="6.3.5.2" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 3894345" /note="GMP synthetase (glutamine-hydrolyzing); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="GMP synthetase (glutamine aminotransferase)" /protein_id="AAC75560.1" /db_xref="GI:1788854" /db_xref="ASAP:ABE-0008254" /db_xref="UniProtKB/Swiss-Prot:P04079" /db_xref="EcoGene:EG10420" /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVAST ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS RVVYDISGKPPATIEWE" gene complement(2495332..2496798) /gene="guaB" /locus_tag="b2508" /gene_synonym="ECK2504" /gene_synonym="guaR" /gene_synonym="JW5401" /db_xref="EcoGene:EG10421" CDS complement(2495332..2496798) /gene="guaB" /locus_tag="b2508" /gene_synonym="ECK2504" /gene_synonym="guaR" /gene_synonym="JW5401" /EC_number="1.1.1.205" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9629924,9740056" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="IMP dehydrogenase" /protein_id="AAC75561.1" /db_xref="GI:1788855" /db_xref="ASAP:ABE-0008257" /db_xref="UniProtKB/Swiss-Prot:P0ADG7" /db_xref="EcoGene:EG10421" /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS" gene 2496960..2498330 /gene="xseA" /locus_tag="b2509" /gene_synonym="ECK2505" /gene_synonym="JW2493" /gene_synonym="xse" /db_xref="EcoGene:EG11072" CDS 2496960..2498330 /gene="xseA" /locus_tag="b2509" /gene_synonym="ECK2505" /gene_synonym="JW2493" /gene_synonym="xse" /EC_number="3.1.11.6" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 3021756" /note="GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="exonuclease VII, large subunit" /protein_id="AAC75562.1" /db_xref="GI:1788856" /db_xref="ASAP:ABE-0008263" /db_xref="UniProtKB/Swiss-Prot:P04994" /db_xref="EcoGene:EG11072" /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL KRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND ERVARAIFTSRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRAQLSATRERFGNAVTH LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK SRKKVH" gene complement(2498327..2498542) /gene="yfgJ" /locus_tag="b2510" /gene_synonym="ECK2506" /gene_synonym="JW5402" /db_xref="EcoGene:EG14206" CDS complement(2498327..2498542) /gene="yfgJ" /locus_tag="b2510" /gene_synonym="ECK2506" /gene_synonym="JW5402" /note="GO_process: GO:0042966 - biotin carboxyl carrier protein biosynthetic process" /codon_start=1 /transl_table=11 /product="DUF1407 family protein" /protein_id="AAC75563.2" /db_xref="GI:87082119" /db_xref="ASAP:ABE-0008266" /db_xref="UniProtKB/Swiss-Prot:P76575" /db_xref="EcoGene:EG14206" /translation="MELHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVL KACGAVDYFCQHGHGLISKKRVEFVLA" gene complement(2498612..2500084) /gene="der" /locus_tag="b2511" /gene_synonym="ECK2507" /gene_synonym="engA" /gene_synonym="JW5403" /gene_synonym="yfgK" /db_xref="EcoGene:EG14207" CDS complement(2498612..2500084) /gene="der" /locus_tag="b2511" /gene_synonym="ECK2507" /gene_synonym="engA" /gene_synonym="JW5403" /gene_synonym="yfgK" /function="putative factor; Not classified" /note="putative GTP-binding factor" /codon_start=1 /transl_table=11 /product="GTPase; multicopy suppressor of ftsJ" /protein_id="AAC75564.2" /db_xref="GI:87082120" /db_xref="ASAP:ABE-0008270" /db_xref="UniProtKB/Swiss-Prot:P0A6P5" /db_xref="EcoGene:EG14207" /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL PWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK" gene complement(2500202..2501380) /gene="bamB" /locus_tag="b2512" /gene_synonym="ECK2508" /gene_synonym="JW2496" /gene_synonym="yfgL" /db_xref="EcoGene:EG14208" CDS complement(2500202..2501380) /gene="bamB" /locus_tag="b2512" /gene_synonym="ECK2508" /gene_synonym="JW2496" /gene_synonym="yfgL" /note="putative dehydrogenase; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="BamABCDE complex OM biogenesis lipoprotein" /protein_id="AAC75565.1" /db_xref="GI:1788859" /db_xref="ASAP:ABE-0008272" /db_xref="UniProtKB/Swiss-Prot:P77774" /db_xref="EcoGene:EG14208" /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSA VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYN GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR " gene complement(2501391..2502011) /gene="yfgM" /locus_tag="b2513" /gene_synonym="ECK2509" /gene_synonym="JW2497" /db_xref="EcoGene:EG14209" CDS complement(2501391..2502011) /gene="yfgM" /locus_tag="b2513" /gene_synonym="ECK2509" /gene_synonym="JW2497" /codon_start=1 /transl_table=11 /product="ancillary SecYEG translocon subunit; putative anti-RcsB factor" /protein_id="AAC75566.1" /db_xref="GI:1788860" /db_xref="ASAP:ABE-0008274" /db_xref="UniProtKB/Swiss-Prot:P76576" /db_xref="EcoGene:EG14209" /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI" gene complement(2502029..2503303) /gene="hisS" /locus_tag="b2514" /gene_synonym="ECK2510" /gene_synonym="JW2498" /db_xref="EcoGene:EG10453" CDS complement(2502029..2503303) /gene="hisS" /locus_tag="b2514" /gene_synonym="ECK2510" /gene_synonym="JW2498" /EC_number="6.1.1.21" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="histidine tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="histidyl tRNA synthetase" /protein_id="AAC75567.1" /db_xref="GI:1788861" /db_xref="ASAP:ABE-0008278" /db_xref="UniProtKB/Swiss-Prot:P60906" /db_xref="EcoGene:EG10453" /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLV ASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV ANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG" gene complement(2503414..2504532) /gene="ispG" /locus_tag="b2515" /gene_synonym="ECK2511" /gene_synonym="gcpE" /gene_synonym="JW2499" /db_xref="EcoGene:EG10370" CDS complement(2503414..2504532) /gene="ispG" /locus_tag="b2515" /gene_synonym="ECK2511" /gene_synonym="gcpE" /gene_synonym="JW2499" /EC_number="1.17.7.1" /codon_start=1 /transl_table=11 /product="1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase" /protein_id="AAC75568.1" /db_xref="GI:1788863" /db_xref="ASAP:ABE-0008281" /db_xref="UniProtKB/Swiss-Prot:P62620" /db_xref="EcoGene:EG10370" /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGV DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK" gene complement(2504559..2505572) /gene="rodZ" /locus_tag="b2516" /gene_synonym="ECK2512" /gene_synonym="JW2500" /gene_synonym="yfgA" /db_xref="EcoGene:EG10015" CDS complement(2504559..2505572) /gene="rodZ" /locus_tag="b2516" /gene_synonym="ECK2512" /gene_synonym="JW2500" /gene_synonym="yfgA" /function="putative membrane; Not classified" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="MreB assembly cytoskeletal protein" /protein_id="AAC75569.1" /db_xref="GI:1788864" /db_xref="ASAP:ABE-0008283" /db_xref="UniProtKB/Swiss-Prot:P27434" /db_xref="EcoGene:EG10015" /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQ GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS PAQ" gene complement(2505857..2507011) /gene="rlmN" /locus_tag="b2517" /gene_synonym="ECK2513" /gene_synonym="JW2501" /gene_synonym="yfgB" /db_xref="EcoGene:EG12401" CDS complement(2505857..2507011) /gene="rlmN" /locus_tag="b2517" /gene_synonym="ECK2513" /gene_synonym="JW2501" /gene_synonym="yfgB" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent" /protein_id="AAC75570.1" /db_xref="GI:1788865" /db_xref="ASAP:ABE-0008287" /db_xref="UniProtKB/Swiss-Prot:P36979" /db_xref="EcoGene:EG12401" /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV" gene complement(2507161..2507592) /gene="ndk" /locus_tag="b2518" /gene_synonym="ECK2514" /gene_synonym="JW2502" /db_xref="EcoGene:EG10650" CDS complement(2507161..2507592) /gene="ndk" /locus_tag="b2518" /gene_synonym="ECK2514" /gene_synonym="JW2502" /EC_number="2.7.4.6" /function="enzyme; Purine ribonucleotide biosynthesis" /note="nucleoside diphosphate kinase; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion; GO_process: GO:0009152 - purine ribonucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase" /protein_id="AAC75571.1" /db_xref="GI:1788866" /db_xref="ASAP:ABE-0008291" /db_xref="UniProtKB/Swiss-Prot:P0A763" /db_xref="EcoGene:EG10650" /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR" gene complement(2507741..2510053) /gene="pbpC" /locus_tag="b2519" /gene_synonym="ECK2515" /gene_synonym="JW2503" /gene_synonym="yfgN" /db_xref="EcoGene:EG14210" CDS complement(2507741..2510053) /gene="pbpC" /locus_tag="b2519" /gene_synonym="ECK2515" /gene_synonym="JW2503" /gene_synonym="yfgN" /EC_number="2.4.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="penicillin binding protein 1C (PBP 1C); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain protein" /protein_id="AAC75572.1" /db_xref="GI:1788867" /db_xref="ASAP:ABE-0008294" /db_xref="UniProtKB/Swiss-Prot:P76577" /db_xref="EcoGene:EG14210" /translation="MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARV VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLY LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKITTTL DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV NSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA AYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP PYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ" gene complement(2510054..2515015) /gene="yfhM" /locus_tag="b2520" /gene_synonym="ECK2516" /gene_synonym="JW2504" /db_xref="EcoGene:EG13394" CDS complement(2510054..2515015) /gene="yfhM" /locus_tag="b2520" /gene_synonym="ECK2516" /gene_synonym="JW2504" /codon_start=1 /transl_table=11 /product="bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein" /protein_id="AAC75573.1" /db_xref="GI:1788868" /db_xref="ASAP:ABE-0008296" /db_xref="UniProtKB/Swiss-Prot:P76578" /db_xref="EcoGene:EG13394" /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG PRDLYRPGETVILNGLLRDADGKALPNQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPKDEVKFSV VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGIRPQFASK SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW QEIDVRAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDEN RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVVQQA LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIALALKTPRNSDERIW LGDYGSSLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAR TIQDLPGKWQAQTSFSAEQLTGEKAQNSNLNSDQLVTLQVSNSGDQPLWLRMDASGYP QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP AGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP" gene 2515222..2516067 /gene="sseA" /locus_tag="b2521" /gene_synonym="ECK2517" /gene_synonym="JW2505" /db_xref="EcoGene:EG11600" CDS 2515222..2516067 /gene="sseA" /locus_tag="b2521" /gene_synonym="ECK2517" /gene_synonym="JW2505" /EC_number="2.8.1.2" /function="putative enzyme; Not classified" /note="putative thiosulfate sulfurtransferase; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="3-mercaptopyruvate sulfurtransferase" /protein_id="AAC75574.2" /db_xref="GI:87082121" /db_xref="ASAP:ABE-0008299" /db_xref="UniProtKB/Swiss-Prot:P31142" /db_xref="EcoGene:EG11600" /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN GHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAP RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP VEPVK" gene 2516583..2516886 /gene="ryfA" /locus_tag="b4440" /gene_synonym="ECK2518" /gene_synonym="JWR0244" /gene_synonym="PAIR3b" /gene_synonym="tp1" /db_xref="EcoGene:EG31154" ncRNA 2516583..2516886 /ncRNA_class="other" /gene="ryfA" /locus_tag="b4440" /gene_synonym="ECK2518" /gene_synonym="JWR0244" /gene_synonym="PAIR3b" /gene_synonym="tp1" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047260" /db_xref="EcoGene:EG31154" gene complement(2516885..2517661) /gene="sseB" /locus_tag="b2522" /gene_synonym="ECK2519" /gene_synonym="JW5404" /db_xref="EcoGene:EG11601" CDS complement(2516885..2517661) /gene="sseB" /locus_tag="b2522" /gene_synonym="ECK2519" /gene_synonym="JW5404" /function="phenotype; Not classified" /note="enhanced serine sensitivity; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="rhodanase-like enzyme, sulfur transfer from thiosulfate" /protein_id="AAC75575.2" /db_xref="GI:87082122" /db_xref="ASAP:ABE-0008301" /db_xref="UniProtKB/Swiss-Prot:P0AFZ1" /db_xref="EcoGene:EG11601" /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT LFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPID ICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII" repeat_region 2517698..2517794 /note="RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2517803..2519086) /gene="pepB" /locus_tag="b2523" /gene_synonym="ECK2520" /gene_synonym="JW2507" /gene_synonym="yfhI" /db_xref="EcoGene:EG12310" CDS complement(2517803..2519086) /gene="pepB" /locus_tag="b2523" /gene_synonym="ECK2520" /gene_synonym="JW2507" /gene_synonym="yfhI" /EC_number="3.4.11.23" /function="putative enzyme; Not classified" /note="putative peptidase" /codon_start=1 /transl_table=11 /product="aminopeptidase B" /protein_id="AAC75576.2" /db_xref="GI:87082123" /db_xref="ASAP:ABE-0008305" /db_xref="UniProtKB/Swiss-Prot:P37095" /db_xref="EcoGene:EG12310" /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVVWPDLDDAQRQELDN RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL HTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS AAQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA" gene complement(2519264..2519464) /gene="iscX" /locus_tag="b2524" /gene_synonym="ECK2521" /gene_synonym="JW2508" /gene_synonym="yfhJ" /db_xref="EcoGene:EG12311" CDS complement(2519264..2519464) /gene="iscX" /locus_tag="b2524" /gene_synonym="ECK2521" /gene_synonym="JW2508" /gene_synonym="yfhJ" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="Fe(2+) donor and activity modulator for cysteine desulfurase" /protein_id="AAC75577.1" /db_xref="GI:1788873" /db_xref="ASAP:ABE-0008309" /db_xref="UniProtKB/Swiss-Prot:P0C0L9" /db_xref="EcoGene:EG12311" /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD DPQASNEKILEAILLVWLDEAE" gene complement(2519476..2519811) /gene="fdx" /locus_tag="b2525" /gene_synonym="ECK2522" /gene_synonym="JW2509" /db_xref="EcoGene:EG11328" CDS complement(2519476..2519811) /gene="fdx" /locus_tag="b2525" /gene_synonym="ECK2522" /gene_synonym="JW2509" /function="carrier; Energy metabolism, carbon: Electron transport" /note="[2FE-2S] ferredoxin, electron carrer protein; GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="[2Fe-2S] ferredoxin" /protein_id="AAC75578.1" /db_xref="GI:1788874" /db_xref="ASAP:ABE-0008311" /db_xref="UniProtKB/Swiss-Prot:P0A9R4" /db_xref="EcoGene:EG11328" /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR YTINHAREH" gene complement(2519813..2521663) /gene="hscA" /locus_tag="b2526" /gene_synonym="ECK2523" /gene_synonym="hsc" /gene_synonym="JW2510" /db_xref="EcoGene:EG12130" CDS complement(2519813..2521663) /gene="hscA" /locus_tag="b2526" /gene_synonym="ECK2523" /gene_synonym="hsc" /gene_synonym="JW2510" /function="factor; Chaperones" /note="DnaK-homologue chaperone Hsc66; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="DnaK-like molecular chaperone specific for IscU" /protein_id="AAC75579.1" /db_xref="GI:1788875" /db_xref="ASAP:ABE-0008315" /db_xref="UniProtKB/Swiss-Prot:P0A6Z1" /db_xref="EcoGene:EG12130" /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKI ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAA AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV" gene complement(2521680..2522195) /gene="hscB" /locus_tag="b2527" /gene_synonym="ECK2524" /gene_synonym="JW2511" /gene_synonym="yfhE" /db_xref="EcoGene:EG12131" CDS complement(2521680..2522195) /gene="hscB" /locus_tag="b2527" /gene_synonym="ECK2524" /gene_synonym="JW2511" /gene_synonym="yfhE" /function="factor; Chaperones" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB" /protein_id="AAC75580.1" /db_xref="GI:1788876" /db_xref="ASAP:ABE-0008317" /db_xref="UniProtKB/Swiss-Prot:P0A6L9" /db_xref="EcoGene:EG12131" /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS AEQLEEKLLDF" gene complement(2522291..2522614) /gene="iscA" /locus_tag="b2528" /gene_synonym="ECK2525" /gene_synonym="JW2512" /gene_synonym="yfhF" /db_xref="EcoGene:EG12132" CDS complement(2522291..2522614) /gene="iscA" /locus_tag="b2528" /gene_synonym="ECK2525" /gene_synonym="JW2512" /gene_synonym="yfhF" /function="putative regulator; Not classified" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="FeS cluster assembly protein" /protein_id="AAC75581.1" /db_xref="GI:1788877" /db_xref="ASAP:ABE-0008319" /db_xref="UniProtKB/Swiss-Prot:P0AAC8" /db_xref="EcoGene:EG12132" /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG ESFHV" gene complement(2522631..2523017) /gene="iscU" /locus_tag="b2529" /gene_synonym="ECK2526" /gene_synonym="hsm-5" /gene_synonym="JW2513" /gene_synonym="miaC" /gene_synonym="nifU" /gene_synonym="yfhN" /db_xref="EcoGene:EG13395" CDS complement(2522631..2523017) /gene="iscU" /locus_tag="b2529" /gene_synonym="ECK2526" /gene_synonym="hsm-5" /gene_synonym="JW2513" /gene_synonym="miaC" /gene_synonym="nifU" /gene_synonym="yfhN" /note="GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly scaffold protein" /protein_id="AAC75582.1" /db_xref="GI:1788878" /db_xref="ASAP:ABE-0008321" /db_xref="UniProtKB/Swiss-Prot:P0ACD4" /db_xref="EcoGene:EG13395" /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV KIHCSILAEDAIKAAIADYKSKREAK" gene complement(2523045..2524259) /gene="iscS" /locus_tag="b2530" /gene_synonym="ECK2527" /gene_synonym="JW2514" /gene_synonym="nuvC" /gene_synonym="yfhO" /gene_synonym="yzzO" /db_xref="EcoGene:EG12677" CDS complement(2523045..2524259) /gene="iscS" /locus_tag="b2530" /gene_synonym="ECK2527" /gene_synonym="JW2514" /gene_synonym="nuvC" /gene_synonym="yfhO" /gene_synonym="yzzO" /EC_number="2.8.1.7" /function="enzyme; tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="cysteine desulfurase; cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent" /protein_id="AAT48142.1" /db_xref="GI:48994898" /db_xref="ASAP:ABE-0008324" /db_xref="UniProtKB/Swiss-Prot:P0A6B7" /db_xref="EcoGene:EG12677" /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ GVDLNSIEWAHH" gene complement(2524371..2524859) /gene="iscR" /locus_tag="b2531" /gene_synonym="ECK2528" /gene_synonym="JW2515" /gene_synonym="yfhP" /db_xref="EcoGene:EG13397" CDS complement(2524371..2524859) /gene="iscR" /locus_tag="b2531" /gene_synonym="ECK2528" /gene_synonym="JW2515" /gene_synonym="yfhP" /function="regulation of Fe-S cluster assembly genes" /note="Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor" /protein_id="AAC75584.1" /db_xref="GI:1788880" /db_xref="ASAP:ABE-0008326" /db_xref="UniProtKB/Swiss-Prot:P0AGK8" /db_xref="EcoGene:EG13397" /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL RA" repeat_region 2525037..2525302 /note="REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences" gene complement(2525311..2526051) /gene="trmJ" /locus_tag="b2532" /gene_synonym="ECK2529" /gene_synonym="JW2516" /gene_synonym="yfhQ" /db_xref="EcoGene:EG13452" CDS complement(2525311..2526051) /gene="trmJ" /locus_tag="b2532" /gene_synonym="ECK2529" /gene_synonym="JW2516" /gene_synonym="yfhQ" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent" /protein_id="AAC75585.1" /db_xref="GI:1788881" /db_xref="ASAP:ABE-0008332" /db_xref="UniProtKB/Swiss-Prot:P0AE01" /db_xref="EcoGene:EG13452" /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR ARPESQELNILRGILASIEQQNKGNKAE" gene 2526170..2526973 /gene="suhB" /locus_tag="b2533" /gene_synonym="ECK2530" /gene_synonym="JW2517" /gene_synonym="ssyA" /db_xref="EcoGene:EG10983" CDS 2526170..2526973 /gene="suhB" /locus_tag="b2533" /gene_synonym="ECK2530" /gene_synonym="JW2517" /gene_synonym="ssyA" /EC_number="3.1.3.25" /function="phenotype; Global regulatory functions" /note="inositol-1-monophosphatase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="inositol monophosphatase" /protein_id="AAC75586.1" /db_xref="GI:1788882" /db_xref="ASAP:ABE-0008337" /db_xref="UniProtKB/Swiss-Prot:P0ADG4" /db_xref="EcoGene:EG10983" /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR" gene 2527118..2527972 /gene="yfhR" /locus_tag="b2534" /gene_synonym="ECK2531" /gene_synonym="JW2518" /db_xref="EcoGene:EG13453" CDS 2527118..2527972 /gene="yfhR" /locus_tag="b2534" /gene_synonym="ECK2531" /gene_synonym="JW2518" /function="putative enzyme; Not classified" /note="putative enzyme (3.4.-)" /codon_start=1 /transl_table=11 /product="putative S9 family prolyl oligopeptidase" /protein_id="AAC75587.2" /db_xref="GI:226510965" /db_xref="ASAP:ABE-0008340" /db_xref="UniProtKB/Swiss-Prot:P77538" /db_xref="EcoGene:EG13453" /translation="MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA NILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP LLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFI LSALNPQN" gene 2528163..2529443 /gene="csiE" /locus_tag="b2535" /gene_synonym="csi-16" /gene_synonym="ECK2532" /gene_synonym="JW5878" /db_xref="EcoGene:EG13418" CDS 2528163..2529443 /gene="csiE" /locus_tag="b2535" /gene_synonym="csi-16" /gene_synonym="ECK2532" /gene_synonym="JW5878" /codon_start=1 /transl_table=11 /product="stationary phase inducible protein" /protein_id="AAC75588.2" /db_xref="GI:87082124" /db_xref="ASAP:ABE-0008346" /db_xref="UniProtKB/Swiss-Prot:P54901" /db_xref="EcoGene:EG13418" /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA" gene complement(2529435..2530574) /gene="hcaT" /locus_tag="b2536" /gene_synonym="ECK2533" /gene_synonym="JW2520" /gene_synonym="yfhS" /db_xref="EcoGene:EG13454" CDS complement(2529435..2530574) /gene="hcaT" /locus_tag="b2536" /gene_synonym="ECK2533" /gene_synonym="JW2520" /gene_synonym="yfhS" /function="transport; Degradation of small molecules: Carbon compounds" /note="MFS (major facilitator superfamily) transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative 3-phenylpropionic transporter" /protein_id="AAC75589.1" /db_xref="GI:1788886" /db_xref="ASAP:ABE-0008348" /db_xref="UniProtKB/Swiss-Prot:Q47142" /db_xref="EcoGene:EG13454" /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL LGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIG FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVIL ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAH AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC" gene complement(2530734..2531624) /gene="hcaR" /locus_tag="b2537" /gene_synonym="ECK2534" /gene_synonym="JW2521" /gene_synonym="phdR" /gene_synonym="yfhT" /db_xref="EcoGene:EG13455" CDS complement(2530734..2531624) /gene="hcaR" /locus_tag="b2537" /gene_synonym="ECK2534" /gene_synonym="JW2521" /gene_synonym="phdR" /gene_synonym="yfhT" /function="regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional activator of hca cluster; completely contained in another CDS; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="hca operon transcriptional regulator" /protein_id="AAC75590.1" /db_xref="GI:1788887" /db_xref="ASAP:ABE-0008351" /db_xref="UniProtKB/Swiss-Prot:Q47141" /db_xref="EcoGene:EG13455" /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEV NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNI VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM KPALRDFIAIVQERLASVTA" gene complement(2530734..2530799) /gene="iroK" /locus_tag="b4706" /gene_synonym="ECK4518" /db_xref="EcoGene:EG14501" CDS complement(2530734..2530799) /gene="iroK" /locus_tag="b4706" /gene_synonym="ECK4518" /note="completely contained in another CDS" /codon_start=1 /transl_table=11 /product="3-hydroxypropionic acid resistance peptide" /protein_id="AGW80435.1" /db_xref="GI:545778207" /db_xref="EcoGene:EG14501" /translation="MKPALRDFIAIVQERLASVTA" gene 2531760..2533121 /gene="hcaE" /locus_tag="b2538" /gene_synonym="digA" /gene_synonym="ECK2535" /gene_synonym="hcaA" /gene_synonym="hcaA1" /gene_synonym="JW2522" /gene_synonym="phdC1" /gene_synonym="yfhU" /db_xref="EcoGene:EG13456" CDS 2531760..2533121 /gene="hcaE" /locus_tag="b2538" /gene_synonym="digA" /gene_synonym="ECK2535" /gene_synonym="hcaA" /gene_synonym="hcaA1" /gene_synonym="JW2522" /gene_synonym="phdC1" /gene_synonym="yfhU" /EC_number="1.14.12.19" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3-phenylpropionate dioxygenase, large (alpha) subunit" /protein_id="AAC75591.1" /db_xref="GI:1788888" /db_xref="ASAP:ABE-0008355" /db_xref="UniProtKB/Swiss-Prot:P0ABR5" /db_xref="EcoGene:EG13456" /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSH ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE VMK" gene 2533118..2533636 /gene="hcaF" /locus_tag="b2539" /gene_synonym="digB" /gene_synonym="ECK2536" /gene_synonym="hcaA" /gene_synonym="hcaA2" /gene_synonym="hcaB" /gene_synonym="JW2523" /gene_synonym="phdC2" /gene_synonym="yfhV" /db_xref="EcoGene:EG13457" CDS 2533118..2533636 /gene="hcaF" /locus_tag="b2539" /gene_synonym="digB" /gene_synonym="ECK2536" /gene_synonym="hcaA" /gene_synonym="hcaA2" /gene_synonym="hcaB" /gene_synonym="JW2523" /gene_synonym="phdC2" /gene_synonym="yfhV" /EC_number="1.14.12.19" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="small terminal subunit of phenylpropionate dioxygenase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3-phenylpropionate dioxygenase, small (beta) subunit" /protein_id="AAC75592.1" /db_xref="GI:1788889" /db_xref="ASAP:ABE-0008357" /db_xref="UniProtKB/Swiss-Prot:Q47140" /db_xref="EcoGene:EG13457" /translation="MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC QISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF" gene 2533636..2533956 /gene="hcaC" /locus_tag="b2540" /gene_synonym="ECK2537" /gene_synonym="hcaA3" /gene_synonym="JW2524" /gene_synonym="phdB" /gene_synonym="yfhW" /db_xref="EcoGene:EG13458" CDS 2533636..2533956 /gene="hcaC" /locus_tag="b2540" /gene_synonym="ECK2537" /gene_synonym="hcaA3" /gene_synonym="JW2524" /gene_synonym="phdB" /gene_synonym="yfhW" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="ferredoxin subunit of phenylpropionate dioxygenase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3-phenylpropionate dioxygenase, ferredoxin subunit" /protein_id="AAC75593.1" /db_xref="GI:1788890" /db_xref="ASAP:ABE-0008359" /db_xref="UniProtKB/Swiss-Prot:P0ABW0" /db_xref="EcoGene:EG13458" /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLP EAQP" gene 2533953..2534765 /gene="hcaB" /locus_tag="b2541" /gene_synonym="ECK2538" /gene_synonym="JW2525" /gene_synonym="phdD" /gene_synonym="yfhX" /db_xref="EcoGene:EG13459" CDS 2533953..2534765 /gene="hcaB" /locus_tag="b2541" /gene_synonym="ECK2538" /gene_synonym="JW2525" /gene_synonym="phdD" /gene_synonym="yfhX" /EC_number="1.3.1.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase" /protein_id="AAC75594.1" /db_xref="GI:1788891" /db_xref="ASAP:ABE-0008361" /db_xref="UniProtKB/Swiss-Prot:P0CI31" /db_xref="EcoGene:EG13459" /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL PLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL" gene 2534775..2535977 /gene="hcaD" /locus_tag="b2542" /gene_synonym="ECK2539" /gene_synonym="hcaA4" /gene_synonym="JW2526" /gene_synonym="phdA" /gene_synonym="yfhY" /db_xref="EcoGene:EG13460" CDS 2534775..2535977 /gene="hcaD" /locus_tag="b2542" /gene_synonym="ECK2539" /gene_synonym="hcaA4" /gene_synonym="JW2526" /gene_synonym="phdA" /gene_synonym="yfhY" /EC_number="1.18.1.3" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="ferredoxin reductase subunit of phenylpropionate dioxygenase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="phenylpropionate dioxygenase, ferredoxin reductase subunit" /protein_id="AAC75595.1" /db_xref="GI:1788892" /db_xref="ASAP:ABE-0008363" /db_xref="UniProtKB/Swiss-Prot:P77650" /db_xref="EcoGene:EG13460" /translation="MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYER PPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWD QLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIIGAGTIGLELA ASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKV ELTLQSGETLQADVVIYGIGISANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDV AITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDM RGDDWLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSGKTFDAKLLID ENIALKSL" gene 2536074..2536496 /gene="yphA" /locus_tag="b2543" /gene_synonym="ECK2540" /gene_synonym="JW2527" /db_xref="EcoGene:EG13462" CDS 2536074..2536496 /gene="yphA" /locus_tag="b2543" /gene_synonym="ECK2540" /gene_synonym="JW2527" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DoxX family inner membrane protein" /protein_id="AAC75596.2" /db_xref="GI:145693171" /db_xref="ASAP:ABE-0008365" /db_xref="UniProtKB/Swiss-Prot:P0AD47" /db_xref="EcoGene:EG13462" /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQ YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR" repeat_region 2536504..2536537 /note="REP185 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2536544..2537416) /gene="yphB" /locus_tag="b2544" /gene_synonym="ECK2541" /gene_synonym="JW2528" /db_xref="EcoGene:EG13463" CDS complement(2536544..2537416) /gene="yphB" /locus_tag="b2544" /gene_synonym="ECK2541" /gene_synonym="JW2528" /codon_start=1 /transl_table=11 /product="mutarotase superfamily protein, YphB family" /protein_id="AAC75597.1" /db_xref="GI:1788894" /db_xref="ASAP:ABE-0008368" /db_xref="UniProtKB/Swiss-Prot:P76584" /db_xref="EcoGene:EG13463" /translation="MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ AQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEG YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG ESTTSEMSLRVEWL" gene complement(2537428..2538489) /gene="yphC" /locus_tag="b2545" /gene_synonym="ECK2542" /gene_synonym="JW5842" /db_xref="EcoGene:EG13464" CDS complement(2537428..2538489) /gene="yphC" /locus_tag="b2545" /gene_synonym="ECK2542" /gene_synonym="JW5842" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative Zn-dependent NAD(P)-binding oxidoreductase" /protein_id="AAC75598.2" /db_xref="GI:87082125" /db_xref="ASAP:ABE-0008370" /db_xref="UniProtKB/Swiss-Prot:P77360" /db_xref="EcoGene:EG13464" /translation="MKTMLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDV HYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGF CPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGV GTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQL GVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTADWGRVVYIGET GKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAITHRFSLEQAGD AYALMASGKCGKVVINFPD" gene complement(2538555..2539553) /gene="yphD" /locus_tag="b2546" /gene_synonym="ECK2543" /gene_synonym="JW2530" /db_xref="EcoGene:EG13465" CDS complement(2538555..2539553) /gene="yphD" /locus_tag="b2546" /gene_synonym="ECK2543" /gene_synonym="JW2530" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter permease" /protein_id="AAC75599.1" /db_xref="GI:1788896" /db_xref="ASAP:ABE-0008373" /db_xref="UniProtKB/Swiss-Prot:P77315" /db_xref="EcoGene:EG13465" /translation="MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV PLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID ENEVLDWLGGQFLGVPVSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR" gene complement(2539578..2541089) /gene="yphE" /locus_tag="b2547" /gene_synonym="ECK2544" /gene_synonym="JW2531" /db_xref="EcoGene:EG13466" CDS complement(2539578..2541089) /gene="yphE" /locus_tag="b2547" /gene_synonym="ECK2544" /gene_synonym="JW2531" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter ATPase" /protein_id="AAC75600.1" /db_xref="GI:1788897" /db_xref="ASAP:ABE-0008376" /db_xref="UniProtKB/Swiss-Prot:P77509" /db_xref="EcoGene:EG13466" /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDM LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH" gene complement(2541112..2542095) /gene="yphF" /locus_tag="b2548" /gene_synonym="ECK2545" /gene_synonym="JW2532" /db_xref="EcoGene:EG13467" CDS complement(2541112..2542095) /gene="yphF" /locus_tag="b2548" /gene_synonym="ECK2545" /gene_synonym="JW2532" /function="putative regulator; Not classified" /note="putative LACI-type transcriptional regulator; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter periplasmic binding protein" /protein_id="AAC75601.1" /db_xref="GI:1788898" /db_xref="ASAP:ABE-0008378" /db_xref="UniProtKB/Swiss-Prot:P77269" /db_xref="EcoGene:EG13467" /translation="MPTKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYY AGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSS RTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKID QPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIIST PDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDIS GKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP" gene complement(2542192..2545473) /gene="yphG" /locus_tag="b2549" /gene_synonym="ECK2546" /gene_synonym="JW5405" /db_xref="EcoGene:EG13468" CDS complement(2542192..2545473) /gene="yphG" /locus_tag="b2549" /gene_synonym="ECK2546" /gene_synonym="JW5405" /codon_start=1 /transl_table=11 /product="DUF4380 domain-containing TPR repeat protein" /protein_id="AAC75602.2" /db_xref="GI:87082126" /db_xref="ASAP:ABE-0008380" /db_xref="UniProtKB/Swiss-Prot:P76585" /db_xref="EcoGene:EG13468" /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR AVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLH VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCN ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQALPLPDVAKA PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNR ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI EECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDARQPQQACELL HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEATRCLRLAATGDRTINIHS YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI FNRVH" gene 2545591..2546784 /gene="yphH" /locus_tag="b2550" /gene_synonym="ECK2547" /gene_synonym="JW5406" /db_xref="EcoGene:EG13469" CDS 2545591..2546784 /gene="yphH" /locus_tag="b2550" /gene_synonym="ECK2547" /gene_synonym="JW5406" /function="putative regulator; Not classified" /note="putative NAGC-like transcriptional regulator; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75603.2" /db_xref="GI:87082127" /db_xref="ASAP:ABE-0008384" /db_xref="UniProtKB/Swiss-Prot:P76586" /db_xref="EcoGene:EG13469" /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDHTINLALAIHGQVDPVTGVSQT MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK SQPVSTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA QLRQI" repeat_region 2546845..2546942 /note="RIP186 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2546982..2548235) /gene="glyA" /locus_tag="b2551" /gene_synonym="ECK2548" /gene_synonym="JW2535" /db_xref="EcoGene:EG10408" CDS complement(2546982..2548235) /gene="glyA" /locus_tag="b2551" /gene_synonym="ECK2548" /gene_synonym="JW2535" /EC_number="2.1.2.1" /function="enzyme; Amino acid biosynthesis: Glycine" /experiment="N-terminus verified by Edman degradation: PMID 2034230,9119048,9298646,9740056,10972807" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006545 - glycine biosynthetic process; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="AAC75604.1" /db_xref="GI:1788902" /db_xref="ASAP:ABE-0008389" /db_xref="UniProtKB/Swiss-Prot:P0A825" /db_xref="EcoGene:EG10408" /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS INDEAVIERIKGKVLDICARYPVYA" gene 2548563..2549753 /gene="hmp" /locus_tag="b2552" /gene_synonym="ECK2549" /gene_synonym="fsrB" /gene_synonym="hmpA" /gene_synonym="JW2536" /db_xref="EcoGene:EG10456" CDS 2548563..2549753 /gene="hmp" /locus_tag="b2552" /gene_synonym="ECK2549" /gene_synonym="fsrB" /gene_synonym="hmpA" /gene_synonym="JW2536" /EC_number="1.14.12.1" /EC_number="1.5.1.34" /function="enzyme; Energy metabolism, carbon: Electron transport" /experiment="N-terminus verified by Edman degradation: PMID 1601132,2034230,9298646,9724711" /note="dihydropteridine reductase, ferrisiderophore reductase activity" /codon_start=1 /transl_table=11 /product="fused nitric oxide dioxygenase/dihydropteridine reductase 2" /protein_id="AAC75605.1" /db_xref="GI:1788903" /db_xref="ASAP:ABE-0008396" /db_xref="UniProtKB/Swiss-Prot:P24232" /db_xref="EcoGene:EG10456" /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLA MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGP HKVL" repeat_region 2549763..2549782 /note="REP187 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2549798..2550136) /gene="glnB" /locus_tag="b2553" /gene_synonym="ECK2550" /gene_synonym="JW2537" /db_xref="EcoGene:EG10384" CDS complement(2549798..2550136) /gene="glnB" /locus_tag="b2553" /gene_synonym="ECK2550" /gene_synonym="JW2537" /function="regulator; Amino acid biosynthesis: Glutamine" /experiment="N-terminus verified by Edman degradation: PMID 8293810" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006542 - glutamine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="regulatory protein P-II for glutamine synthetase" /protein_id="AAC75606.1" /db_xref="GI:1788904" /db_xref="ASAP:ABE-0008398" /db_xref="UniProtKB/Swiss-Prot:P0A9Z1" /db_xref="EcoGene:EG10384" /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI RTGEEDDAAI" gene complement(2550197..2551531) /gene="glrR" /locus_tag="b2554" /gene_synonym="ECK2551" /gene_synonym="JW2538" /gene_synonym="qseF" /gene_synonym="yfhA" /db_xref="EcoGene:EG11285" CDS complement(2550197..2551531) /gene="glrR" /locus_tag="b2554" /gene_synonym="ECK2551" /gene_synonym="JW2538" /gene_synonym="qseF" /gene_synonym="yfhA" /function="putative regulator; Not classified" /note="putative 2-component transcriptional regulator; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="response regulator regulating glmY sRNA in two-component system with sensor protein GlrK" /protein_id="AAC75607.1" /db_xref="GI:1788905" /db_xref="ASAP:ABE-0008400" /db_xref="UniProtKB/Swiss-Prot:P0AFU4" /db_xref="EcoGene:EG11285" /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE" gene complement(2551521..2552234) /gene="yfhG" /locus_tag="b2555" /gene_synonym="ECK2552" /gene_synonym="JW2539" /gene_synonym="qseG" /db_xref="EcoGene:EG12139" CDS complement(2551521..2552234) /gene="yfhG" /locus_tag="b2555" /gene_synonym="ECK2552" /gene_synonym="JW2539" /gene_synonym="qseG" /function="phenotype; Not classified" /note="putative alpha helix protein" /codon_start=1 /transl_table=11 /product="putative outer membrane protein modulating the QseEF response" /protein_id="AAC75608.1" /db_xref="GI:1788906" /db_xref="ASAP:ABE-0008405" /db_xref="UniProtKB/Swiss-Prot:P0AD44" /db_xref="EcoGene:EG12139" /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQ NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT PHESEKPAPSTHEVTPDEP" gene complement(2552399..2553826) /gene="glrK" /locus_tag="b2556" /gene_synonym="ECK2553" /gene_synonym="JW5407" /gene_synonym="qseE" /gene_synonym="yfhK" /gene_synonym="yfhZ" /db_xref="EcoGene:EG13461" CDS complement(2552399..2553826) /gene="glrK" /locus_tag="b2556" /gene_synonym="ECK2553" /gene_synonym="JW5407" /gene_synonym="qseE" /gene_synonym="yfhK" /gene_synonym="yfhZ" /function="putative regulator; Not classified" /note="putative 2-component sensor protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR" /protein_id="AAC75609.2" /db_xref="GI:87082128" /db_xref="ASAP:ABE-0008409" /db_xref="UniProtKB/Swiss-Prot:P52101" /db_xref="EcoGene:EG13461" /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA GVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSL HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG ELYLVDESGQDVCFRIELPSSKNTK" gene complement(2553885..2554068) /gene="glmY" /locus_tag="b4441" /gene_synonym="ECK2554" /gene_synonym="JWR0245" /gene_synonym="sroF" /gene_synonym="tke1" /db_xref="EcoGene:EG31155" ncRNA complement(2553885..2554068) /ncRNA_class="other" /gene="glmY" /locus_tag="b4441" /gene_synonym="ECK2554" /gene_synonym="JWR0245" /gene_synonym="sroF" /gene_synonym="tke1" /product="sRNA activator of glmS mRNA, glmZ processing antagonist" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047261" /db_xref="EcoGene:EG31155" gene complement(2554384..2558271) /gene="purL" /locus_tag="b2557" /gene_synonym="ECK2555" /gene_synonym="JW2541" /gene_synonym="purG" /gene_synonym="purI" /db_xref="EcoGene:EG10797" CDS complement(2554384..2558271) /gene="purL" /locus_tag="b2557" /gene_synonym="ECK2555" /gene_synonym="JW2541" /gene_synonym="purG" /gene_synonym="purI" /EC_number="6.3.5.3" /function="enzyme; Purine ribonucleotide biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 2659070" /note="phosphoribosylformyl-glycineamide synthetase = FGAM synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006164 - purine nucleotide biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoribosylformyl-glycineamide synthetase" /protein_id="AAT48143.1" /db_xref="GI:48994899" /db_xref="ASAP:ABE-0008412" /db_xref="UniProtKB/Swiss-Prot:P15254" /db_xref="EcoGene:EG10797" /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTS VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR HKIFNADWVIDGEQQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL SNAMPELVSDGGRGGKFELREILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD ALAREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGIDADIATLGD DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG" gene 2558529..2560085 /gene="mltF" /locus_tag="b2558" /gene_synonym="ECK2556" /gene_synonym="JW2542" /gene_synonym="yfhD" /db_xref="EcoGene:EG11373" CDS 2558529..2560085 /gene="mltF" /locus_tag="b2558" /gene_synonym="ECK2556" /gene_synonym="JW2542" /gene_synonym="yfhD" /function="enzyme; Transporter; Not classified" /note="putative periplasmic binding transport protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="membrane-bound lytic transglycosylase F, murein hydrolase" /protein_id="AAC75611.2" /db_xref="GI:171474010" /db_xref="ASAP:ABE-0008417" /db_xref="UniProtKB/Swiss-Prot:P0AGC5" /db_xref="EcoGene:EG11373" /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVV VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF SRKGSEEKQN" gene complement(2560082..2560585) /gene="tadA" /locus_tag="b2559" /gene_synonym="ECK2557" /gene_synonym="JW2543" /gene_synonym="yfhC" /db_xref="EcoGene:EG11372" CDS complement(2560082..2560585) /gene="tadA" /locus_tag="b2559" /gene_synonym="ECK2557" /gene_synonym="JW2543" /gene_synonym="yfhC" /EC_number="3.5.4.-" /function="enzyme; tRNA modification" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA-specific adenosine deaminase" /protein_id="AAC75612.2" /db_xref="GI:145693172" /db_xref="ASAP:ABE-0008419" /db_xref="UniProtKB/Swiss-Prot:P68398" /db_xref="EcoGene:EG11372" /translation="MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEG WNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRV VFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQK KAQSSTD" gene complement(2560643..2561278) /gene="pgpC" /locus_tag="b2560" /gene_synonym="ECK2558" /gene_synonym="JW5408" /gene_synonym="yfhB" /db_xref="EcoGene:EG11371" CDS complement(2560643..2561278) /gene="pgpC" /locus_tag="b2560" /gene_synonym="ECK2558" /gene_synonym="JW5408" /gene_synonym="yfhB" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase C, membrane bound" /protein_id="AAC75613.2" /db_xref="GI:87082129" /db_xref="ASAP:ABE-0008421" /db_xref="UniProtKB/Swiss-Prot:P0AD42" /db_xref="EcoGene:EG11371" /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE RLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE" gene 2561487..2562335 /gene="yfhH" /locus_tag="b2561" /gene_synonym="ECK2559" /gene_synonym="JW2545" /db_xref="EcoGene:EG12308" CDS 2561487..2562335 /gene="yfhH" /locus_tag="b2561" /gene_synonym="ECK2559" /gene_synonym="JW2545" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75614.2" /db_xref="GI:87082130" /db_xref="ASAP:ABE-0008428" /db_xref="UniProtKB/Swiss-Prot:P37767" /db_xref="EcoGene:EG12308" /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA LVKKLV" gene 2562391..2562651 /gene="yfhL" /locus_tag="b2562" /gene_synonym="ECK2560" /gene_synonym="JW2546" /db_xref="EcoGene:EG13215" CDS 2562391..2562651 /gene="yfhL" /locus_tag="b2562" /gene_synonym="ECK2560" /gene_synonym="JW2546" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S cluster-containing protein" /protein_id="AAC75615.1" /db_xref="GI:1788914" /db_xref="ASAP:ABE-0008431" /db_xref="UniProtKB/Swiss-Prot:P52102" /db_xref="EcoGene:EG13215" /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI" gene complement(2562845..2562925) /gene="shoB" /locus_tag="b4687" /gene_synonym="ECK4502" /gene_synonym="ryfB" /gene_synonym="yphI" /db_xref="EcoGene:EG14494" CDS complement(2562845..2562925) /gene="shoB" /locus_tag="b4687" /gene_synonym="ECK4502" /gene_synonym="ryfB" /gene_synonym="yphI" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO60003.1" /db_xref="GI:226510966" /db_xref="UniProtKB/Swiss-Prot:C1P611" /db_xref="EcoGene:EG14494" /translation="MTDCRYLIKRVIKIIIAVLQLILLFL" gene 2563248..2563324 /gene="ohsC" /locus_tag="b4608" /gene_synonym="ECK4417" /gene_synonym="ryfC" /db_xref="EcoGene:EG31178" ncRNA 2563248..2563324 /ncRNA_class="antisense_RNA" /gene="ohsC" /locus_tag="b4608" /gene_synonym="ECK4417" /gene_synonym="ryfC" /product="sRNA antisense regulator of shoB toxin" /db_xref="EcoGene:EG31178" gene complement(2563346..2563726) /gene="acpS" /locus_tag="b2563" /gene_synonym="dpj" /gene_synonym="ECK2561" /gene_synonym="JW2547" /db_xref="EcoGene:EG10247" CDS complement(2563346..2563726) /gene="acpS" /locus_tag="b2563" /gene_synonym="dpj" /gene_synonym="ECK2561" /gene_synonym="JW2547" /EC_number="2.7.8.7" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="holo-[acyl-carrier-protein] synthase 1" /protein_id="AAC75616.1" /db_xref="GI:1788916" /db_xref="ASAP:ABE-0008433" /db_xref="UniProtKB/Swiss-Prot:P24224" /db_xref="EcoGene:EG10247" /translation="MAILGLGTDIVEIARIEAVIARSGDRLARRVLSDNEWAIWKTHH QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL GVANMHVTLADERHYACATVIIES" gene complement(2563726..2564457) /gene="pdxJ" /locus_tag="b2564" /gene_synonym="ECK2562" /gene_synonym="JW2548" /db_xref="EcoGene:EG10693" CDS complement(2563726..2564457) /gene="pdxJ" /locus_tag="b2564" /gene_synonym="ECK2562" /gene_synonym="JW2548" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="pyridoxine biosynthesis; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="pyridoxine 5'-phosphate synthase" /protein_id="AAC75617.1" /db_xref="GI:1788917" /db_xref="ASAP:ABE-0008435" /db_xref="UniProtKB/Swiss-Prot:P0A794" /db_xref="EcoGene:EG10693" /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA DAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI IGRAVMTGLKDAVAEMKRLMLEARG" gene complement(2564469..2565197) /gene="recO" /locus_tag="b2565" /gene_synonym="ECK2563" /gene_synonym="JW2549" /db_xref="EcoGene:EG10832" CDS complement(2564469..2565197) /gene="recO" /locus_tag="b2565" /gene_synonym="ECK2563" /gene_synonym="JW2549" /function="regulator; DNA - replication, repair, restriction/modification" /note="protein interacts with RecR and possibly RecF proteins; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="gap repair protein" /protein_id="AAC75618.1" /db_xref="GI:2367140" /db_xref="ASAP:ABE-0008438" /db_xref="UniProtKB/Swiss-Prot:P0A7H3" /db_xref="EcoGene:EG10832" /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY ETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG GKPLKSRELFRQFMPKRTVKTHYE" gene complement(2565209..2566114) /gene="era" /locus_tag="b2566" /gene_synonym="ECK2564" /gene_synonym="JW2550" /gene_synonym="sdgE" /db_xref="EcoGene:EG10270" CDS complement(2565209..2566114) /gene="era" /locus_tag="b2566" /gene_synonym="ECK2564" /gene_synonym="JW2550" /gene_synonym="sdgE" /function="factor; Global regulatory functions" /note="GTP-binding protein; GO_process: GO:0007049 - cell cycle" /codon_start=1 /transl_table=11 /product="membrane-associated, 16S rRNA-binding GTPase" /protein_id="AAC75619.1" /db_xref="GI:1788919" /db_xref="ASAP:ABE-0008440" /db_xref="UniProtKB/Swiss-Prot:P06616" /db_xref="EcoGene:EG10270" /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT PDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE LWVKVKSGWADDERALRSLGYVDDL" gene complement(2566111..2566791) /gene="rnc" /locus_tag="b2567" /gene_synonym="ECK2565" /gene_synonym="JW2551" /gene_synonym="ranA" /db_xref="EcoGene:EG10857" CDS complement(2566111..2566791) /gene="rnc" /locus_tag="b2567" /gene_synonym="ECK2565" /gene_synonym="JW2551" /gene_synonym="ranA" /EC_number="3.1.26.3" /function="enzyme; Degradation of RNA" /experiment="N-terminus verified by Edman degradation: PMID 2105934" /note="RNase III, ds RNA; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="RNase III" /protein_id="AAC75620.1" /db_xref="GI:1788920" /db_xref="ASAP:ABE-0008448" /db_xref="UniProtKB/Swiss-Prot:P0A7Y0" /db_xref="EcoGene:EG10857" /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ ALKKLELE" gene complement(2567063..2568037) /gene="lepB" /locus_tag="b2568" /gene_synonym="ECK2566" /gene_synonym="JW2552" /gene_synonym="lep" /db_xref="EcoGene:EG10530" CDS complement(2567063..2568037) /gene="lepB" /locus_tag="b2568" /gene_synonym="ECK2566" /gene_synonym="JW2552" /gene_synonym="lep" /EC_number="3.4.21.89" /function="enzyme; Protein, peptide secretion" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="leader peptidase (signal peptidase I)" /protein_id="AAC75621.1" /db_xref="GI:1788921" /db_xref="ASAP:ABE-0008450" /db_xref="UniProtKB/Swiss-Prot:P00803" /db_xref="EcoGene:EG10530" /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH" gene complement(2568053..2569852) /gene="lepA" /locus_tag="b2569" /gene_synonym="ECK2567" /gene_synonym="JW2553" /db_xref="EcoGene:EG10529" CDS complement(2568053..2569852) /gene="lepA" /locus_tag="b2569" /gene_synonym="ECK2567" /gene_synonym="JW2553" /function="factor; Proteins - translation and modification" /note="GTP-binding elongation factor, may be inner membrane protein; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="back-translocating elongation factor EF4, GTPase" /protein_id="AAC75622.1" /db_xref="GI:1788922" /db_xref="ASAP:ABE-0008452" /db_xref="UniProtKB/Swiss-Prot:P60785" /db_xref="EcoGene:EG10529" /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK" gene complement(2570050..2570529) /gene="rseC" /locus_tag="b2570" /gene_synonym="ECK2568" /gene_synonym="JW2554" /db_xref="EcoGene:EG13178" CDS complement(2570050..2570529) /gene="rseC" /locus_tag="b2570" /gene_synonym="ECK2568" /gene_synonym="JW2554" /function="regulator; Global regulatory functions" /note="sigma-E factor, negative regulatory protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006350 - transcription; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="SoxR iron-sulfur cluster reduction factor component" /protein_id="AAC75623.1" /db_xref="GI:1788923" /db_xref="ASAP:ABE-0008457" /db_xref="UniProtKB/Swiss-Prot:P46187" /db_xref="EcoGene:EG13178" /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS DVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ" gene complement(2570526..2571482) /gene="rseB" /locus_tag="b2571" /gene_synonym="ECK2569" /gene_synonym="JW2555" /db_xref="EcoGene:EG13177" CDS complement(2570526..2571482) /gene="rseB" /locus_tag="b2571" /gene_synonym="ECK2569" /gene_synonym="JW2555" /function="regulator; Global regulatory functions" /note="regulates activity of sigma-E factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="anti-sigma E factor, binds RseA" /protein_id="AAC75624.1" /db_xref="GI:1788924" /db_xref="ASAP:ABE-0008459" /db_xref="UniProtKB/Swiss-Prot:P0AFX9" /db_xref="EcoGene:EG13177" /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTL NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ" gene complement(2571482..2572132) /gene="rseA" /locus_tag="b2572" /gene_synonym="ECK2570" /gene_synonym="JW2556" /gene_synonym="mclA" /gene_synonym="yfiJ" /db_xref="EcoGene:EG12341" CDS complement(2571482..2572132) /gene="rseA" /locus_tag="b2572" /gene_synonym="ECK2570" /gene_synonym="JW2556" /gene_synonym="mclA" /gene_synonym="yfiJ" /function="regulator; Global regulatory functions" /note="sigma-E factor, negative regulatory protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="anti-sigma factor" /protein_id="AAC75625.1" /db_xref="GI:1788925" /db_xref="ASAP:ABE-0008462" /db_xref="UniProtKB/Swiss-Prot:P0AFX7" /db_xref="EcoGene:EG12341" /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ" gene complement(2572165..2572740) /gene="rpoE" /locus_tag="b2573" /gene_synonym="ECK2571" /gene_synonym="JW2557" /gene_synonym="sigE" /db_xref="EcoGene:EG11897" CDS complement(2572165..2572740) /gene="rpoE" /locus_tag="b2573" /gene_synonym="ECK2571" /gene_synonym="JW2557" /gene_synonym="sigE" /function="regulator; Global regulatory functions" /note="RNA polymerase, sigma-E factor; heat shock and oxidative stress; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma E factor" /protein_id="AAC75626.1" /db_xref="GI:1788926" /db_xref="ASAP:ABE-0008467" /db_xref="UniProtKB/Swiss-Prot:P0AGB6" /db_xref="EcoGene:EG11897" /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR" gene 2573148..2574770 /gene="nadB" /locus_tag="b2574" /gene_synonym="ECK2572" /gene_synonym="JW2558" /gene_synonym="nic" /gene_synonym="nicB" /db_xref="EcoGene:EG10631" CDS 2573148..2574770 /gene="nadB" /locus_tag="b2574" /gene_synonym="ECK2572" /gene_synonym="JW2558" /gene_synonym="nic" /gene_synonym="nicB" /EC_number="1.4.3.16" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /experiment="N-terminus verified by Edman degradation: PMID 2187483,2841129" /note="quinolinate synthetase, B protein; GO_process: GO:0009435 - NAD biosynthetic process" /codon_start=1 /transl_table=11 /product="quinolinate synthase, L-aspartate oxidase (B protein) subunit" /protein_id="AAC75627.1" /db_xref="GI:1788928" /db_xref="ASAP:ABE-0008471" /db_xref="UniProtKB/Swiss-Prot:P10902" /db_xref="EcoGene:EG10631" /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV LFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERS NAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPD ISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTR FMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLG LGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSL LECLVYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDY VGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRK ESRGLHFTLDYPELLTHSGPSILSPGNHYINR" gene complement(2574755..2575492) /gene="trmN" /locus_tag="b2575" /gene_synonym="ECK2573" /gene_synonym="JW2559" /gene_synonym="trmN6" /gene_synonym="yfiC" /db_xref="EcoGene:EG11538" CDS complement(2574755..2575492) /gene="trmN" /locus_tag="b2575" /gene_synonym="ECK2573" /gene_synonym="JW2559" /gene_synonym="trmN6" /gene_synonym="yfiC" /EC_number="2.1.1.223" /function="enzyme; tRNA modification" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase" /protein_id="AAC75628.2" /db_xref="GI:87082131" /db_xref="ASAP:ABE-0008473" /db_xref="UniProtKB/Swiss-Prot:P31825" /db_xref="EcoGene:EG11538" /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHT ADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECIT EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS DRLVIRGPDQNYSEAYTALTQAFYLFM" gene 2575624..2576958 /gene="srmB" /locus_tag="b2576" /gene_synonym="ECK2574" /gene_synonym="JW2560" /gene_synonym="rbaB" /gene_synonym="rhlA" /db_xref="EcoGene:EG10975" CDS 2575624..2576958 /gene="srmB" /locus_tag="b2576" /gene_synonym="ECK2574" /gene_synonym="JW2560" /gene_synonym="rbaB" /gene_synonym="rhlA" /EC_number="2.7.7.-" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="AAC75629.1" /db_xref="GI:1788930" /db_xref="ASAP:ABE-0008478" /db_xref="UniProtKB/Swiss-Prot:P21507" /db_xref="EcoGene:EG10975" /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKH THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTG KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE" repeat_region 2577011..2577108 /note="RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2577167..2578048) /gene="yfiE" /locus_tag="b2577" /gene_synonym="ECK2575" /gene_synonym="JW2561" /db_xref="EcoGene:EG11785" CDS complement(2577167..2578048) /gene="yfiE" /locus_tag="b2577" /gene_synonym="ECK2575" /gene_synonym="JW2561" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75630.2" /db_xref="GI:87082132" /db_xref="ASAP:ABE-0008483" /db_xref="UniProtKB/Swiss-Prot:P33634" /db_xref="EcoGene:EG11785" /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLS YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL ISIESIKRCVAANIGVSYLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVS PAMHTFIQCVEESFVAG" gene 2578151..2578738 /gene="eamB" /locus_tag="b2578" /gene_synonym="ECK2576" /gene_synonym="JW2562" /gene_synonym="yfiK" /db_xref="EcoGene:EG12445" CDS 2578151..2578738 /gene="eamB" /locus_tag="b2578" /gene_synonym="ECK2576" /gene_synonym="JW2562" /gene_synonym="yfiK" /codon_start=1 /transl_table=11 /product="cysteine and O-acetylserine exporter" /protein_id="AAC75631.1" /db_xref="GI:1788932" /db_xref="ASAP:ABE-0008487" /db_xref="UniProtKB/Swiss-Prot:P38101" /db_xref="EcoGene:EG12445" /translation="MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLA GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY" gene complement(2578794..2579177) /gene="grcA" /locus_tag="b2579" /gene_synonym="ECK2577" /gene_synonym="JW2563" /gene_synonym="yfiD" /db_xref="EcoGene:EG11784" CDS complement(2578794..2579177) /gene="grcA" /locus_tag="b2579" /gene_synonym="ECK2577" /gene_synonym="JW2563" /gene_synonym="yfiD" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /experiment="N-terminus verified by Edman degradation: PMID 9600841,9740056,9868784,10094700" /note="putative formate acetyltransferase; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="autonomous glycyl radical cofactor" /protein_id="AAC75632.1" /db_xref="GI:1788933" /db_xref="ASAP:ABE-0008489" /db_xref="UniProtKB/Swiss-Prot:P68066" /db_xref="EcoGene:EG11784" /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG YAVRFNSLTPEQQRDVIARTFTESL" gene 2579482..2580171 /gene="ung" /locus_tag="b2580" /gene_synonym="ECK2578" /gene_synonym="JW2564" /db_xref="EcoGene:EG11058" CDS 2579482..2580171 /gene="ung" /locus_tag="b2580" /gene_synonym="ECK2578" /gene_synonym="JW2564" /EC_number="3.2.2.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="uracil-DNA-glycosylase" /protein_id="AAC75633.1" /db_xref="GI:1788934" /db_xref="ASAP:ABE-0008495" /db_xref="UniProtKB/Swiss-Prot:P12295" /db_xref="EcoGene:EG11058" /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI DWMPVLPAESE" repeat_region 2580186..2580211 /note="REP189 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2580219..2581256) /gene="yfiF" /locus_tag="b2581" /gene_synonym="ECK2579" /gene_synonym="JW2565" /db_xref="EcoGene:EG11786" CDS complement(2580219..2581256) /gene="yfiF" /locus_tag="b2581" /gene_synonym="ECK2579" /gene_synonym="JW2565" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="AAC75634.1" /db_xref="GI:1788935" /db_xref="ASAP:ABE-0008497" /db_xref="UniProtKB/Swiss-Prot:P0AGJ5" /db_xref="EcoGene:EG11786" /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC AHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV LLGEWWRQNKA" gene 2581463..2581882 /gene="trxC" /locus_tag="b2582" /gene_synonym="ECK2580" /gene_synonym="JW2566" /gene_synonym="yfiG" /db_xref="EcoGene:EG11887" CDS 2581463..2581882 /gene="trxC" /locus_tag="b2582" /gene_synonym="ECK2580" /gene_synonym="JW2566" /gene_synonym="yfiG" /EC_number="1.8.1.8" /function="putative enzyme; Not classified" /note="putative thioredoxin-like protein" /codon_start=1 /transl_table=11 /product="thioredoxin 2" /protein_id="AAC75635.1" /db_xref="GI:1788936" /db_xref="ASAP:ABE-0008501" /db_xref="UniProtKB/Swiss-Prot:P0AGG4" /db_xref="EcoGene:EG11887" /translation="MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL" gene 2581951..2582649 /gene="yfiP" /locus_tag="b2583" /gene_synonym="ECK2581" /gene_synonym="JW5409" /db_xref="EcoGene:EG14223" CDS 2581951..2582649 /gene="yfiP" /locus_tag="b2583" /gene_synonym="ECK2581" /gene_synonym="JW5409" /codon_start=1 /transl_table=11 /product="DTW domain protein" /protein_id="AAC75636.2" /db_xref="GI:87082133" /db_xref="ASAP:ABE-0008503" /db_xref="UniProtKB/Swiss-Prot:Q47319" /db_xref="EcoGene:EG14223" /translation="MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNP DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS VDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT QHLGSITAEQLESV" gene 2582681..2585341 /gene="pka" /locus_tag="b2584" /gene_synonym="ECK2582" /gene_synonym="JW2568" /gene_synonym="pat" /gene_synonym="patZ" /gene_synonym="yfiQ" /db_xref="EcoGene:EG14224" CDS 2582681..2585341 /gene="pka" /locus_tag="b2584" /gene_synonym="ECK2582" /gene_synonym="JW2568" /gene_synonym="pat" /gene_synonym="patZ" /gene_synonym="yfiQ" /function="enzyme; Proteins - translation and modification" /codon_start=1 /transl_table=11 /product="protein lysine acetyltransferase" /protein_id="AAC75637.1" /db_xref="GI:1788938" /db_xref="ASAP:ABE-0008506" /db_xref="UniProtKB/Swiss-Prot:P76594" /db_xref="EcoGene:EG14224" /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA VETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA RVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA LARKLGFNVDIQLEEGIVGLTLNLAQREES" gene 2585455..2586810 /gene="pssA" /locus_tag="b2585" /gene_synonym="ECK2583" /gene_synonym="JW2569" /gene_synonym="pss" /db_xref="EcoGene:EG10781" CDS 2585455..2586810 /gene="pssA" /locus_tag="b2585" /gene_synonym="ECK2583" /gene_synonym="JW2569" /gene_synonym="pss" /EC_number="2.7.8.8" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /experiment="N-terminus verified by Edman degradation: PMID 2002065" /note="phosphatidylserine synthase; phospholipid synthesis; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphatidylserine synthase; CDP-diacylglycerol-serine O-phosphatidyltransferase" /protein_id="AAC75638.2" /db_xref="GI:87082134" /db_xref="ASAP:ABE-0008510" /db_xref="UniProtKB/Swiss-Prot:P23830" /db_xref="EcoGene:EG10781" /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI ASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAAS NTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI L" gene 2586856..2587179 /gene="yfiM" /locus_tag="b2586" /gene_synonym="ECK2584" /gene_synonym="JW2570" /db_xref="EcoGene:EG12857" CDS 2586856..2587179 /gene="yfiM" /locus_tag="b2586" /gene_synonym="ECK2584" /gene_synonym="JW2570" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="AAC75639.2" /db_xref="GI:145693173" /db_xref="ASAP:ABE-0008513" /db_xref="UniProtKB/Swiss-Prot:P46126" /db_xref="EcoGene:EG12857" /translation="MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNE YSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVW QLTRH" gene complement(2587176..2588474) /gene="kgtP" /locus_tag="b2587" /gene_synonym="ECK2585" /gene_synonym="JW2571" /gene_synonym="witA" /db_xref="EcoGene:EG10522" CDS complement(2587176..2588474) /gene="kgtP" /locus_tag="b2587" /gene_synonym="ECK2585" /gene_synonym="JW2571" /gene_synonym="witA" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="alpha-ketoglutarate permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="alpha-ketoglutarate transporter" /protein_id="AAC75640.1" /db_xref="GI:1788942" /db_xref="ASAP:ABE-0008515" /db_xref="UniProtKB/Swiss-Prot:P0AEX3" /db_xref="EcoGene:EG10522" /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL" gene complement(2588797..2588916) /gene="rrfG" /locus_tag="b2588" /gene_synonym="ECK2586" /gene_synonym="JWR0051" /db_xref="EcoGene:EG30075" rRNA complement(2588797..2588916) /gene="rrfG" /locus_tag="b2588" /gene_synonym="ECK2586" /gene_synonym="JWR0051" /product="5S ribosomal RNA of rrnG operon" /db_xref="ASAP:ABE-0008519" /db_xref="EcoGene:EG30075" gene complement(2589009..2591912) /gene="rrlG" /locus_tag="b2589" /gene_synonym="ECK2587" /gene_synonym="JWR0052" /db_xref="EcoGene:EG30082" rRNA complement(2589009..2591912) /gene="rrlG" /locus_tag="b2589" /gene_synonym="ECK2587" /gene_synonym="JWR0052" /product="23S ribosomal RNA of rrnG operon" /db_xref="ASAP:ABE-0008521" /db_xref="EcoGene:EG30082" gene complement(2592097..2592172) /gene="gltW" /locus_tag="b2590" /gene_synonym="ECK2588" /gene_synonym="JWR0053" /db_xref="EcoGene:EG30035" tRNA complement(2592097..2592172) /gene="gltW" /locus_tag="b2590" /gene_synonym="ECK2588" /gene_synonym="JWR0053" /product="tRNA-Glu" /note="anticodon: UUC" /db_xref="ASAP:ABE-0008523" /db_xref="EcoGene:EG30035" gene complement(2592344..2593885) /gene="rrsG" /locus_tag="b2591" /gene_synonym="ECK2589" /gene_synonym="JWR0054" /db_xref="EcoGene:EG30089" rRNA complement(2592344..2593885) /gene="rrsG" /locus_tag="b2591" /gene_synonym="ECK2589" /gene_synonym="JWR0054" /product="16S ribosomal RNA of rrnG operon" /db_xref="ASAP:ABE-0008525" /db_xref="EcoGene:EG30089" gene complement(2594328..2596901) /gene="clpB" /locus_tag="b2592" /gene_synonym="ECK2590" /gene_synonym="htpM" /gene_synonym="JW2573" /db_xref="EcoGene:EG10157" CDS complement(2594328..2596901) /gene="clpB" /locus_tag="b2592" /gene_synonym="ECK2590" /gene_synonym="htpM" /gene_synonym="JW2573" /function="putative enzyme; Degradation of proteins, peptides, glyco" /experiment="N-terminus verified by Edman degradation: PMID 1953774" /note="heat shock protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="protein disaggregation chaperone" /protein_id="AAC75641.1" /db_xref="GI:1788943" /db_xref="ASAP:ABE-0008527" /db_xref="UniProtKB/Swiss-Prot:P63284" /db_xref="EcoGene:EG10157" /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV Q" gene complement(2596881..2597023) /gene="ryfD" /locus_tag="b4609" /gene_synonym="ECK4418" /db_xref="EcoGene:EG31179" ncRNA complement(2596881..2597023) /ncRNA_class="other" /gene="ryfD" /locus_tag="b4609" /gene_synonym="ECK4418" /product="novel sRNA, function unknown" /db_xref="EcoGene:EG31179" gene complement(2597031..2597762) /gene="yfiH" /locus_tag="b2593" /gene_synonym="ECK2591" /gene_synonym="JW2575" /db_xref="EcoGene:EG12097" CDS complement(2597031..2597762) /gene="yfiH" /locus_tag="b2593" /gene_synonym="ECK2591" /gene_synonym="JW2575" /codon_start=1 /transl_table=11 /product="UPF0124 family protein" /protein_id="AAC75642.1" /db_xref="GI:1788945" /db_xref="ASAP:ABE-0008530" /db_xref="UniProtKB/Swiss-Prot:P33644" /db_xref="EcoGene:EG12097" /translation="MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP DHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV MTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPR AFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY TENETFFSYRRDKTTGRMASFIWLI" gene complement(2597759..2598739) /gene="rluD" /locus_tag="b2594" /gene_synonym="ECK2592" /gene_synonym="JW2576" /gene_synonym="sfhB" /gene_synonym="yfiI" /db_xref="EcoGene:EG12098" CDS complement(2597759..2598739) /gene="rluD" /locus_tag="b2594" /gene_synonym="ECK2592" /gene_synonym="JW2576" /gene_synonym="sfhB" /gene_synonym="yfiI" /EC_number="4.2.1.70" /function="enzyme; rRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA pseudouridine(1911,1915,1917) synthase" /protein_id="AAC75643.1" /db_xref="GI:1788946" /db_xref="ASAP:ABE-0008532" /db_xref="UniProtKB/Swiss-Prot:P33643" /db_xref="EcoGene:EG12098" /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDL VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR QALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL" gene 2598874..2599611 /gene="bamD" /locus_tag="b2595" /gene_synonym="ecfD" /gene_synonym="ECK2593" /gene_synonym="JW2577" /gene_synonym="yfiO" /db_xref="EcoGene:EG14222" CDS 2598874..2599611 /gene="bamD" /locus_tag="b2595" /gene_synonym="ecfD" /gene_synonym="ECK2593" /gene_synonym="JW2577" /gene_synonym="yfiO" /codon_start=1 /transl_table=11 /product="BamABCDE complex OM biogenesis lipoprotein" /protein_id="AAC75644.1" /db_xref="GI:1788947" /db_xref="ASAP:ABE-0008536" /db_xref="UniProtKB/Swiss-Prot:P0AC02" /db_xref="EcoGene:EG14222" /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM ENAYRQMQMNAQAEKVAKIIAANSSNT" gene 2599882..2600223 /gene="raiA" /locus_tag="b2597" /gene_synonym="ECK2594" /gene_synonym="JW2578" /gene_synonym="yfiA" /db_xref="EcoGene:EG11151" CDS 2599882..2600223 /gene="raiA" /locus_tag="b2597" /gene_synonym="ECK2594" /gene_synonym="JW2578" /gene_synonym="yfiA" /function="putative regulator; Not classified" /note="putative yhbH sigma 54 modulator; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="cold shock protein associated with 30S ribosomal subunit" /protein_id="AAC75646.1" /db_xref="GI:1788949" /db_xref="ASAP:ABE-0008540" /db_xref="UniProtKB/Swiss-Prot:P0AD49" /db_xref="EcoGene:EG11151" /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK DANFVEEVEEE" gene 2600327..2600374 /gene="pheL" /locus_tag="b2598" /gene_synonym="ECK2595" /gene_synonym="JW2579" /gene_synonym="pheAE" /db_xref="EcoGene:EG11271" CDS 2600327..2600374 /gene="pheL" /locus_tag="b2598" /gene_synonym="ECK2595" /gene_synonym="JW2579" /gene_synonym="pheAE" /function="leader; Amino acid biosynthesis: Phenylalanine" /note="leader peptide of chorismate mutase-P-prephenate dehydratase; GO_process: GO:0009094 - L-phenylalanine biosynthetic process" /codon_start=1 /transl_table=11 /product="pheA gene leader peptide" /protein_id="AAC75647.1" /db_xref="GI:1788950" /db_xref="ASAP:ABE-0008543" /db_xref="UniProtKB/Swiss-Prot:P0AD72" /db_xref="EcoGene:EG11271" /translation="MKHIPFFFAFFFTFP" gene 2600473..2601633 /gene="pheA" /locus_tag="b2599" /gene_synonym="ECK2596" /gene_synonym="JW2580" /db_xref="EcoGene:EG10707" CDS 2600473..2601633 /gene="pheA" /locus_tag="b2599" /gene_synonym="ECK2596" /gene_synonym="JW2580" /EC_number="4.2.1.51" /EC_number="5.4.99.5" /function="enzyme; Amino acid biosynthesis: Phenylalanine" /note="chorismate mutase-P and prephenate dehydratase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009094 - L-phenylalanine biosynthetic process; GO_process: GO:0006571 - tyrosine biosynthetic process" /codon_start=1 /transl_table=11 /product="chorismate mutase and prephenate dehydratase, P-protein" /protein_id="AAC75648.1" /db_xref="GI:1788951" /db_xref="ASAP:ABE-0008545" /db_xref="UniProtKB/Swiss-Prot:P0A9J8" /db_xref="EcoGene:EG10707" /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQN FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT" repeat_region 2601643..2601666 /note="REP190 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2601676..2602797) /gene="tyrA" /locus_tag="b2600" /gene_synonym="ECK2597" /gene_synonym="JW2581" /db_xref="EcoGene:EG11039" CDS complement(2601676..2602797) /gene="tyrA" /locus_tag="b2600" /gene_synonym="ECK2597" /gene_synonym="JW2581" /EC_number="1.3.1.12" /EC_number="5.4.99.5" /function="enzyme; Amino acid biosynthesis: Tyrosine" /note="chorismate mutase-T and prephenate dehydrogenase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009094 - L-phenylalanine biosynthetic process; GO_process: GO:0006571 - tyrosine biosynthetic process" /codon_start=1 /transl_table=11 /product="fused chorismate mutase T/prephenate dehydrogenase" /protein_id="AAC75649.1" /db_xref="GI:1788952" /db_xref="ASAP:ABE-0008547" /db_xref="UniProtKB/Swiss-Prot:P07023" /db_xref="EcoGene:EG11039" /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG KLPPLPKDCILVDLASVKNGPLQAMLVAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQG DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ" gene complement(2602808..2603878) /gene="aroF" /locus_tag="b2601" /gene_synonym="ECK2598" /gene_synonym="JW2582" /db_xref="EcoGene:EG10078" CDS complement(2602808..2603878) /gene="aroF" /locus_tag="b2601" /gene_synonym="ECK2598" /gene_synonym="JW2582" /EC_number="2.5.1.54" /function="enzyme; Amino acid biosynthesis: Tyrosine" /experiment="N-terminus verified by Edman degradation: PMID 6104668,6146618" /note="3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible); GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible" /protein_id="AAC75650.1" /db_xref="GI:1788953" /db_xref="ASAP:ABE-0008549" /db_xref="UniProtKB/Swiss-Prot:P00888" /db_xref="EcoGene:EG10078" /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKSI SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE MTDALLREIHQDLNGQLTARVA" gene 2604088..2604453 /gene="yfiL" /locus_tag="b2602" /gene_synonym="ECK2599" /gene_synonym="JW5412" /db_xref="EcoGene:EG12446" CDS 2604088..2604453 /gene="yfiL" /locus_tag="b2602" /gene_synonym="ECK2599" /gene_synonym="JW5412" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="AAC75651.2" /db_xref="GI:87082135" /db_xref="ASAP:ABE-0008565" /db_xref="UniProtKB/Swiss-Prot:P11289" /db_xref="EcoGene:EG12446" /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG SAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQ LHEVWQKGADENASTIRLN" gene 2604603..2605121 /gene="yfiR" /locus_tag="b2603" /gene_synonym="ECK2600" /gene_synonym="JW2584" /db_xref="EcoGene:EG14225" CDS 2604603..2605121 /gene="yfiR" /locus_tag="b2603" /gene_synonym="ECK2600" /gene_synonym="JW2584" /codon_start=1 /transl_table=11 /product="putative periplasmic inhibitor of YfiN activity" /protein_id="AAC75652.1" /db_xref="GI:1788955" /db_xref="ASAP:ABE-0008568" /db_xref="UniProtKB/Swiss-Prot:P64548" /db_xref="EcoGene:EG14225" /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP TFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP DVLMLARKKNDG" gene 2605111..2606337 /gene="yfiN" /locus_tag="b2604" /gene_synonym="ECK2601" /gene_synonym="JW2585" /db_xref="EcoGene:EG12880" CDS 2605111..2606337 /gene="yfiN" /locus_tag="b2604" /gene_synonym="ECK2601" /gene_synonym="JW2585" /codon_start=1 /transl_table=11 /product="putative membrane-anchored diguanylate cyclase" /protein_id="AAC75653.1" /db_xref="GI:1788956" /db_xref="ASAP:ABE-0008570" /db_xref="UniProtKB/Swiss-Prot:P46139" /db_xref="EcoGene:EG12880" /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDA RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELAD HNMYQAKHQRAEKLVR" gene 2606353..2606835 /gene="yfiB" /locus_tag="b2605" /gene_synonym="ECK2602" /gene_synonym="JW2586" /db_xref="EcoGene:EG11152" CDS 2606353..2606835 /gene="yfiB" /locus_tag="b2605" /gene_synonym="ECK2602" /gene_synonym="JW2586" /function="putative membrane; Not classified" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="OM lipoprotein putative positive effector of YfiN activity" /protein_id="AAC75654.1" /db_xref="GI:1788957" /db_xref="ASAP:ABE-0008572" /db_xref="UniProtKB/Swiss-Prot:P07021" /db_xref="EcoGene:EG11152" /translation="MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE GLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP " gene complement(2606911..2607258) /gene="rplS" /locus_tag="b2606" /gene_synonym="ECK2603" /gene_synonym="JW2587" /db_xref="EcoGene:EG10880" CDS complement(2606911..2607258) /gene="rplS" /locus_tag="b2606" /gene_synonym="ECK2603" /gene_synonym="JW2587" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L19" /protein_id="AAC75655.1" /db_xref="GI:1788958" /db_xref="ASAP:ABE-0008574" /db_xref="UniProtKB/Swiss-Prot:P0A7K6" /db_xref="EcoGene:EG10880" /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE RTGKAARIKERLN" gene complement(2607300..2608067) /gene="trmD" /locus_tag="b2607" /gene_synonym="ECK2604" /gene_synonym="JW2588" /db_xref="EcoGene:EG11023" CDS complement(2607300..2608067) /gene="trmD" /locus_tag="b2607" /gene_synonym="ECK2604" /gene_synonym="JW2588" /EC_number="2.1.1.228" /function="enzyme; tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 6337136" /note="tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA m(1)G37 methyltransferase, SAM-dependent" /protein_id="AAC75656.1" /db_xref="GI:1788959" /db_xref="ASAP:ABE-0008576" /db_xref="UniProtKB/Swiss-Prot:P0A873" /db_xref="EcoGene:EG11023" /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA" gene complement(2608098..2608646) /gene="rimM" /locus_tag="b2608" /gene_synonym="ECK2605" /gene_synonym="JW5413" /gene_synonym="yfjA" /db_xref="EcoGene:EG11153" CDS complement(2608098..2608646) /gene="rimM" /locus_tag="b2608" /gene_synonym="ECK2605" /gene_synonym="JW5413" /gene_synonym="yfjA" /function="enzyme; rRNA processing" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ribosome maturation factor" /protein_id="AAC75657.2" /db_xref="GI:87082136" /db_xref="ASAP:ABE-0008579" /db_xref="UniProtKB/Swiss-Prot:P0A7X6" /db_xref="EcoGene:EG11153" /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD GQVIKKVDLTTRSIEVDWDPGF" gene complement(2608665..2608913) /gene="rpsP" /locus_tag="b2609" /gene_synonym="ECK2606" /gene_synonym="JW2590" /db_xref="EcoGene:EG10915" CDS complement(2608665..2608913) /gene="rpsP" /locus_tag="b2609" /gene_synonym="ECK2606" /gene_synonym="JW2590" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 336510,8730873,9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S16" /protein_id="AAC75658.1" /db_xref="GI:1788961" /db_xref="ASAP:ABE-0008583" /db_xref="UniProtKB/Swiss-Prot:P0A7T3" /db_xref="EcoGene:EG10915" /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA" gene complement(2609162..2610523) /gene="ffh" /locus_tag="b2610" /gene_synonym="ECK2607" /gene_synonym="JW5414" /db_xref="EcoGene:EG10300" CDS complement(2609162..2610523) /gene="ffh" /locus_tag="b2610" /gene_synonym="ECK2607" /gene_synonym="JW5414" /function="transport; Protein, peptide secretion" /note="GTP-binding export factor binds to signal sequence, GTP and RNA" /codon_start=1 /transl_table=11 /product="Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)" /protein_id="AAC75659.1" /db_xref="GI:1788963" /db_xref="ASAP:ABE-0008586" /db_xref="UniProtKB/Swiss-Prot:P0AGD7" /db_xref="EcoGene:EG10300" /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF PGR" gene 2610690..2611481 /gene="ypjD" /locus_tag="b2611" /gene_synonym="corE" /gene_synonym="ECK2608" /gene_synonym="JW2592" /db_xref="EcoGene:EG14226" CDS 2610690..2611481 /gene="ypjD" /locus_tag="b2611" /gene_synonym="corE" /gene_synonym="ECK2608" /gene_synonym="JW2592" /codon_start=1 /transl_table=11 /product="cytochrome c assembly protein family inner membrane protein" /protein_id="AAC75660.2" /db_xref="GI:145693174" /db_xref="ASAP:ABE-0008591" /db_xref="UniProtKB/Swiss-Prot:P64432" /db_xref="EcoGene:EG14226" /translation="MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVC HAIALEARILPDGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALI NLALATFMPNEYITHLEATPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL AFNQEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWF VYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLAYFGSRIVQQLIS" gene 2611502..2612788 /gene="yfjD" /locus_tag="b4461" /gene_synonym="corB" /gene_synonym="corF" /gene_synonym="ECK2609" /gene_synonym="JW5415" /gene_synonym="ypjE" /db_xref="EcoGene:EG12442" CDS 2611502..2612788 /gene="yfjD" /locus_tag="b4461" /gene_synonym="corB" /gene_synonym="corF" /gene_synonym="ECK2609" /gene_synonym="JW5415" /gene_synonym="ypjE" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="UPF0053 family inner membrane protein" /protein_id="AAT48144.3" /db_xref="GI:145693175" /db_xref="ASAP:ABE-0174111" /db_xref="UniProtKB/Swiss-Prot:P37908" /db_xref="EcoGene:EG12442" /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE" gene complement(2612843..2613436) /gene="grpE" /locus_tag="b2614" /gene_synonym="ECK2610" /gene_synonym="JW2594" /db_xref="EcoGene:EG10416" CDS complement(2612843..2613436) /gene="grpE" /locus_tag="b2614" /gene_synonym="ECK2610" /gene_synonym="JW2594" /function="IS, phage, Tn; Phage-related functions and prophages" /note="phage lambda replication; host DNA synthesis; heat shock protein; protein repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heat shock protein" /protein_id="AAC75663.1" /db_xref="GI:1788967" /db_xref="ASAP:ABE-0008598" /db_xref="UniProtKB/Swiss-Prot:P09372" /db_xref="EcoGene:EG10416" /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKV ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA" gene 2613559..2614437 /gene="nadK" /locus_tag="b2615" /gene_synonym="ECK2611" /gene_synonym="JW2596" /gene_synonym="yfjB" /gene_synonym="yfjE" /db_xref="EcoGene:EG12192" CDS 2613559..2614437 /gene="nadK" /locus_tag="b2615" /gene_synonym="ECK2611" /gene_synonym="JW2596" /gene_synonym="yfjB" /gene_synonym="yfjE" /EC_number="2.7.1.23" /experiment="N-terminus verified by Edman degradation: PMID 11488932" /codon_start=1 /transl_table=11 /product="NAD kinase" /protein_id="AAC75664.1" /db_xref="GI:1788968" /db_xref="ASAP:ABE-0008603" /db_xref="UniProtKB/Swiss-Prot:P0A7B3" /db_xref="EcoGene:EG12192" /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIA HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS YFNTLSTKLGWSKKLF" gene 2614523..2616184 /gene="recN" /locus_tag="b2616" /gene_synonym="ECK2612" /gene_synonym="JW5416" /gene_synonym="radB" /db_xref="EcoGene:EG10831" CDS 2614523..2616184 /gene="recN" /locus_tag="b2616" /gene_synonym="ECK2612" /gene_synonym="JW5416" /gene_synonym="radB" /function="putative enzyme; DNA - replication, repair, restriction/modification" /note="protein used in recombination and DNA repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006310 - DNA recombination; GO_process: GO:0006281 - DNA repair; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="recombination and repair protein" /protein_id="AAT48145.1" /db_xref="GI:48994901" /db_xref="ASAP:ABE-0008611" /db_xref="UniProtKB/Swiss-Prot:P05824" /db_xref="EcoGene:EG10831" /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA NSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARK METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA" gene 2616333..2616674 /gene="bamE" /locus_tag="b2617" /gene_synonym="ECK2613" /gene_synonym="JW2598" /gene_synonym="smpA" /gene_synonym="smqA" /db_xref="EcoGene:EG10952" CDS 2616333..2616674 /gene="bamE" /locus_tag="b2617" /gene_synonym="ECK2613" /gene_synonym="JW2598" /gene_synonym="smpA" /gene_synonym="smqA" /note="small membrane protein A; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="lipoprotein component of BamABCDE OM biogenesis complex" /protein_id="AAC75666.2" /db_xref="GI:87082138" /db_xref="ASAP:ABE-0008614" /db_xref="UniProtKB/Swiss-Prot:P0A937" /db_xref="EcoGene:EG10952" /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT NIDNKPALSGN" gene complement(2616736..2617026) /gene="ratB" /locus_tag="b2618" /gene_synonym="ECK2614" /gene_synonym="JW2599" /gene_synonym="pasI" /gene_synonym="yfjF" /db_xref="EcoGene:EG13192" CDS complement(2616736..2617026) /gene="ratB" /locus_tag="b2618" /gene_synonym="ECK2614" /gene_synonym="JW2599" /gene_synonym="pasI" /gene_synonym="yfjF" /codon_start=1 /transl_table=11 /product="UPF0125 family protein" /protein_id="AAC75667.2" /db_xref="GI:87082139" /db_xref="ASAP:ABE-0008616" /db_xref="UniProtKB/Swiss-Prot:P52119" /db_xref="EcoGene:EG13192" /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK" gene complement(2617016..2617492) /gene="ratA" /locus_tag="b2619" /gene_synonym="ECK2615" /gene_synonym="JW2600" /gene_synonym="pasT" /gene_synonym="yfjG" /db_xref="EcoGene:EG13193" CDS complement(2617016..2617492) /gene="ratA" /locus_tag="b2619" /gene_synonym="ECK2615" /gene_synonym="JW2600" /gene_synonym="pasT" /gene_synonym="yfjG" /codon_start=1 /transl_table=11 /product="toxic UPF0083 family protein inhibitor of 70S ribosome formation" /protein_id="AAC75668.1" /db_xref="GI:1788972" /db_xref="ASAP:ABE-0008618" /db_xref="UniProtKB/Swiss-Prot:P0AGL5" /db_xref="EcoGene:EG13193" /translation="MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFL PGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGG WKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR" gene 2617624..2618106 /gene="smpB" /locus_tag="b2620" /gene_synonym="ECK2616" /gene_synonym="JW2601" /gene_synonym="smqB" /db_xref="EcoGene:EG11782" CDS 2617624..2618106 /gene="smpB" /locus_tag="b2620" /gene_synonym="ECK2616" /gene_synonym="JW2601" /gene_synonym="smqB" /note="small protein B" /codon_start=1 /transl_table=11 /product="tmRNA-binding trans-translation protein" /protein_id="AAC75669.1" /db_xref="GI:1788973" /db_xref="ASAP:ABE-0008622" /db_xref="UniProtKB/Swiss-Prot:P0A832" /db_xref="EcoGene:EG11782" /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR " gene 2618321..2618683 /gene="ssrA" /locus_tag="b2621" /gene_synonym="ECK2617" /gene_synonym="JWR0055" /gene_synonym="sipB" /db_xref="EcoGene:EG30100" tmRNA 2618321..2618683 /gene="ssrA" /locus_tag="b2621" /gene_synonym="ECK2617" /gene_synonym="JWR0055" /gene_synonym="sipB" /product="tmRNA, 10Sa RNA" /note="acts as tRNA-Ala and mRNA template for tagging proteins resulting from premature transcription termination for degradation, a process known as trans-translation" /function="2.2.6 information transfer; RNA related; rRNA, stable RNA" /function="2.3.6 information transfer; protein related; turnover, degradation" /function="6.6 cell structure; ribosome" /function="7.1 location of gene products; cytoplasm" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:ABE-0008624" /db_xref="EcoGene:EG30100" misc_feature 2618685..2640714 /note="cryptic prophage CP4-57" gene 2618887..2620128 /gene="intA" /locus_tag="b2622" /gene_synonym="ECK2618" /gene_synonym="intX" /gene_synonym="JW2602" /gene_synonym="slpA" /db_xref="EcoGene:EG11783" CDS 2618887..2620128 /gene="intA" /locus_tag="b2622" /gene_synonym="ECK2618" /gene_synonym="intX" /gene_synonym="JW2602" /gene_synonym="slpA" /function="Phage or Prophage Related" /note="prophage CP4-57 integrase" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; integrase" /protein_id="AAC75670.1" /db_xref="GI:1788974" /db_xref="ASAP:ABE-0008630" /db_xref="UniProtKB/Swiss-Prot:P32053" /db_xref="EcoGene:EG11783" /translation="MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQ FRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEA KTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQ PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQ LPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKM NRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVL VSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADL VKAADSGSIVLTHLSKIRLVG" gene complement(2620372..2621328) /gene="yfjH" /locus_tag="b2623" /gene_synonym="ECK2619" /gene_synonym="JW2603" /db_xref="EcoGene:EG13194" CDS complement(2620372..2621328) /gene="yfjH" /locus_tag="b2623" /gene_synonym="ECK2619" /gene_synonym="JW2603" /function="Phage or Prophage Related" /note="putative histone" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75671.1" /db_xref="GI:1788976" /db_xref="ASAP:ABE-0008632" /db_xref="UniProtKB/Swiss-Prot:P52123" /db_xref="EcoGene:EG13194" /translation="MGIFKAKNPCTKNTIFTTSNTLIYGGFMISLNDFYEQICRKRRD LAYHMSECEWAVDTDVLEEDHPEIRIELGRMREQFWSSEKIGTRVRLYSCDVPWETRH HTVNGQLEIKEEYTELYDPAQECWKNLSSNLTKETFLPLVIEPFSINDIFKAHLMFAS ISFFWGKSIMSENENVAFKAFHRAAELFDKCIGMTWFNISVCNQKKLSEVRRSAGKKG GKSKAEVYHIIQLKLVELINDSVPNDGWKNKVVAVNELIEPLWDFIQMSEFEINNQNK KYRVATMSQDALVDTILNQWSLKNEDVKQAFDSAVRRKKRSK" gene 2621372..2621584 /gene="alpA" /locus_tag="b2624" /gene_synonym="ECK2620" /gene_synonym="JW2604" /db_xref="EcoGene:EG12112" CDS 2621372..2621584 /gene="alpA" /locus_tag="b2624" /gene_synonym="ECK2620" /gene_synonym="JW2604" /function="IS, phage, Tn; Phage or Prophage Related" /note="prophage CP4-57 regulatory protein alpA; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; DNA-binding transcriptional activator" /protein_id="AAC75672.1" /db_xref="GI:1788977" /db_xref="ASAP:ABE-0008636" /db_xref="UniProtKB/Swiss-Prot:P33997" /db_xref="EcoGene:EG12112" /translation="MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKK RMLGVKSVGWIEAEIDEWLSQRCKLI" gene 2621713..2623122 /gene="yfjI" /locus_tag="b2625" /gene_synonym="ECK2621" /gene_synonym="JW2605" /db_xref="EcoGene:EG13195" CDS 2621713..2623122 /gene="yfjI" /locus_tag="b2625" /gene_synonym="ECK2621" /gene_synonym="JW2605" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75673.1" /db_xref="GI:1788978" /db_xref="ASAP:ABE-0008643" /db_xref="UniProtKB/Swiss-Prot:P52124" /db_xref="EcoGene:EG13195" /translation="MFNGRPFPVDAFPKIIRNAIYEVEQHTQAPQGLIAASALGVISL ACQNRIDVCRLNNLRGPVSLFLMTLAESGERKSTVDKLLMKPLYQLEEDLFEKYTHDL TAWRNDEAIFNIEKKALMSKLKSDIRRNKDHLATNERLKELLTTNPKAPVRFKFLFND ATPAAIKAHLCGHWRSVGIMSDEAGIIFNGYTLNELPFINKMWDGSIFTVERKNEPEK LIRDARITLSLMVQPNVFKGYIDRKGDMAKGIGFFARCLMCQPASTQGNRKISNPIFS NEHLPVFHQRLMEIVNESIIKINENNRICLRFSAEAERHWIEFYNQVESEMRMIGLLY DFKDYASKMAENMARLAALLHYFSGDGGDISVTAVKAAVEIVAWYIEEYIRLFSKKEE FSLDVSEADELYCWIKDYCTQKFSSCIKKNIILQFGPNKFRNRDKANELIRILISQNK IFISSWGKTKIINITHCVF" gene 2623275..2623901 /gene="yfjJ" /locus_tag="b2626" /gene_synonym="ECK2622" /gene_synonym="JW2607" /db_xref="EcoGene:EG13196" CDS 2623275..2623901 /gene="yfjJ" /locus_tag="b2626" /gene_synonym="ECK2622" /gene_synonym="JW2607" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75674.1" /db_xref="GI:1788979" /db_xref="ASAP:ABE-0008646" /db_xref="UniProtKB/Swiss-Prot:P52125" /db_xref="EcoGene:EG13196" /translation="MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPID TENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREY TKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYP PNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG" gene complement(2624079..2626268) /gene="yfjK" /locus_tag="b2627" /gene_synonym="ECK2623" /gene_synonym="JW2608" /db_xref="EcoGene:EG13197" CDS complement(2624079..2626268) /gene="yfjK" /locus_tag="b2627" /gene_synonym="ECK2623" /gene_synonym="JW2608" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="radiation resistance protein; DEAD/H helicase-like protein; CP4-57 putative defective prophage" /protein_id="AAC75675.1" /db_xref="GI:1788980" /db_xref="ASAP:ABE-0008648" /db_xref="UniProtKB/Swiss-Prot:P52126" /db_xref="EcoGene:EG13197" /translation="MTEIYEQAKHSLQGEDFSSFNYLFAVNKLLSNPVSYDLGRDLIV RALDSRERFSEHTTILKNMVRKSGLFPYLKKEFTSLTPDDLRVLELYRTPFSDGYVFH SMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLLGMGTLKRLVLVVPTVALADETRRR LQERFGDRYQIIHHSSQVCHSDQAVYVLTQERVNERDDIVDIDLFVIDEFYKLAFRQL KSGDIDHQDERVIELNIALSKLLKVSRQFYLTGPFVNSIRGLEKLGYPHTFVSTDFNT VALDVKTFGIKANDDKAKLKALGEIAHACVDATIIYCKSPTVAGLVARELIRLGHGTP TENPHVDWVSEEFDADWDYTVALRNGIGLHFGALPRALQQYTADQFNAGKLRFLLCTS TIIEGVNTIAKNVVIYDNRDGTRSIDKFTHGNIKGRAGRMGVHFVGKIFCLEEIPEDN LNQEVDIPLGIQGIDTPINLLASVQPDHLSEFSQDRFDEVFINDRVSIDLVKKHSYFR VEQFEMLQSMFEMMDDNEFSSLVFHWTPATNFLKTFAKIIARLVPHTFSRNGVPVKPT DVMIAKLAGYLSAESYSEYLKNQIDYARQWISEGEKRTLSIALNNDLKLITNTFGYTL PKVLSLMEDVVKHHAVKRGIRSKVDYTHVKLAFESFHLPPGVNALEEIGIPIQTLHRL VDLLEFSDEADVDELSQYLRDTQDIWSRSIGYVDQMFIRRALGIRRH" gene complement(2626265..2627881) /gene="yfjL" /locus_tag="b2628" /gene_synonym="ECK2624" /gene_synonym="JW2609" /db_xref="EcoGene:EG13198" CDS complement(2626265..2627881) /gene="yfjL" /locus_tag="b2628" /gene_synonym="ECK2624" /gene_synonym="JW2609" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein" /protein_id="AAC75676.1" /db_xref="GI:1788981" /db_xref="ASAP:ABE-0008650" /db_xref="UniProtKB/Swiss-Prot:P52127" /db_xref="EcoGene:EG13198" /translation="MESNDSGGVAAKHGFLFQDCVAAYHVTRMLRDKTIRSVRCEVTD DIDIVSDGYIDFVQVKSTGKTRWNISDIVQNSKGADKKTIPCSSILHKSMQCESDLSL GRRYSIVTEEKVNKTLEYLTISPNARLDKPGRQELIDDLNKRTDNFLTDSGISVSDWI DAATWEVFSSLRELELLGIKNIRLASQDLHGVILSSETVAEDIWCRILDTVTRKGEHS RRIHSADDKSYLRPDLLEWFKQRVEDDQSRSGRKIYVKRDLPHILTPFRAPMASVCAK RKGQVLHQQYSLKKYRYKHIADNVCQWLDEVFLRPKEMSDIHKLTFIEKRERLKNSVF KSLHDVSEFLGRVLLHATIRQHHESQPIPCMLYVEKAGAEKILENVHIVRRDPEGDQL WIGFSELVTDINIAVRLPEIRDQLYEDISDCIDTARKKILDIKDDNYLLRHDIDEILD GSQPFDAHLDRFTFVLFVGYDSNLLTEPETPGFEDDLEKETAVLFEKFAADLIEDSPF ANLCIHVFIYPAPSLERLTQLVDEKVREVV" gene complement(2628241..2628504) /gene="yfjM" /locus_tag="b2629" /gene_synonym="ECK2625" /gene_synonym="JW2610" /db_xref="EcoGene:EG13199" CDS complement(2628241..2628504) /gene="yfjM" /locus_tag="b2629" /gene_synonym="ECK2625" /gene_synonym="JW2610" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75677.1" /db_xref="GI:1788982" /db_xref="ASAP:ABE-0008654" /db_xref="UniProtKB/Swiss-Prot:P52128" /db_xref="EcoGene:EG13199" /translation="MGDDVHRFGNLFLISPSSNSILSNYSPADKKKFYVETERAESPK QAIMMSYKEWGPDGQGINNIESHEHAMLTLLKEHRDMTLPTRK" gene 2628646..2629719 /gene="rnlA" /locus_tag="b2630" /gene_synonym="ECK2626" /gene_synonym="JW2611" /gene_synonym="std" /gene_synonym="yfjN" /db_xref="EcoGene:EG13200" CDS 2628646..2629719 /gene="rnlA" /locus_tag="b2630" /gene_synonym="ECK2626" /gene_synonym="JW2611" /gene_synonym="std" /gene_synonym="yfjN" /function="Phage or Prophage Related" /note="putative cell division protein" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; RNase LS" /protein_id="AAC75678.1" /db_xref="GI:1788983" /db_xref="ASAP:ABE-0008659" /db_xref="UniProtKB/Swiss-Prot:P52129" /db_xref="EcoGene:EG13200" /translation="MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGL RVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNM VLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGK LQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADA YPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPA GFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMI SDMARLMGKATRAWGIIKDLYIV" gene 2629712..2630083 /gene="rnlB" /locus_tag="b2631" /gene_synonym="ECK2627" /gene_synonym="JW5418" /gene_synonym="yfjO" /db_xref="EcoGene:EG13201" CDS 2629712..2630083 /gene="rnlB" /locus_tag="b2631" /gene_synonym="ECK2627" /gene_synonym="JW5418" /gene_synonym="yfjO" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75679.2" /db_xref="GI:87082140" /db_xref="ASAP:ABE-0008665" /db_xref="UniProtKB/Swiss-Prot:P52130" /db_xref="EcoGene:EG13201" /translation="MFEITGINVSGALKAVVMATGFENPLSSVNEIETKLSALLGSET TGEILFDLLCANGPEWNRFVTLEMKYGRIMLDTAKIIDEQDVPTHILSKLTFTLRNHP EYLEASVLSPDDVRQVLSMDF" gene 2630438..2631301 /gene="yfjP" /locus_tag="b2632" /gene_synonym="ECK2628" /gene_synonym="JW5419" /db_xref="EcoGene:EG13202" CDS 2630438..2631301 /gene="yfjP" /locus_tag="b2632" /gene_synonym="ECK2628" /gene_synonym="JW5419" /function="Phage or Prophage Related" /note="putative GTP-binding protein" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; 50S ribosome-binding GTPase family protein" /protein_id="AAT48146.1" /db_xref="GI:48994902" /db_xref="ASAP:ABE-0008669" /db_xref="UniProtKB/Swiss-Prot:P52131" /db_xref="EcoGene:EG13202" /translation="MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGK TGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDT EYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEP TSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREA SSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVV SVARAVWDFFF" gene 2631393..2632214 /gene="yfjQ" /locus_tag="b2633" /gene_synonym="ECK2629" /gene_synonym="JW2614" /db_xref="EcoGene:EG13203" CDS 2631393..2632214 /gene="yfjQ" /locus_tag="b2633" /gene_synonym="ECK2629" /gene_synonym="JW2614" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75681.1" /db_xref="GI:1788987" /db_xref="ASAP:ABE-0008673" /db_xref="UniProtKB/Swiss-Prot:P52132" /db_xref="EcoGene:EG13203" /translation="MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSER YTYIPTISLLDSLQREGFQPFFACQTRVRDPRRREHTKHMLRLRREGQITGKQVPEII LLNSHDGTSSYQMLPGMFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIF ERVEEKRDAMQSLLLPPPVQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLW TTYQRIQENLIKGGLSGRNAKGGRTHTRAVRGIDGDVKLNRALWVMAETLLTQLQ" gene 2632431..2633132 /gene="yfjR" /locus_tag="b2634" /gene_synonym="ECK2630" /gene_synonym="JW2615" /db_xref="EcoGene:EG13204" CDS 2632431..2633132 /gene="yfjR" /locus_tag="b2634" /gene_synonym="ECK2630" /gene_synonym="JW2615" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative DNA-binding transcriptional regulator" /protein_id="AAC75682.1" /db_xref="GI:1788988" /db_xref="ASAP:ABE-0008676" /db_xref="UniProtKB/Swiss-Prot:P52133" /db_xref="EcoGene:EG13204" /translation="MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTL RRDFRERLMYLDLEYQSGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNA LLMCDESPCVIAPANPVPSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLI HQQTWYLVAEHEGHIAVFTLDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFI QHSLLTFVPADSPPE" gene 2633173..2633409 /gene="ypjK" /locus_tag="b2635" /gene_synonym="ECK2631" /gene_synonym="JW5888" /db_xref="EcoGene:EG14379" CDS 2633173..2633409 /gene="ypjK" /locus_tag="b2635" /gene_synonym="ECK2631" /gene_synonym="JW5888" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative inner membrane protein" /protein_id="AAC75683.2" /db_xref="GI:87082141" /db_xref="ASAP:ABE-0008678" /db_xref="UniProtKB/Swiss-Prot:P52134" /db_xref="EcoGene:EG14379" /translation="MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAG AASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK" gene 2633409..2633852 /gene="yfjS" /locus_tag="b2636" /gene_synonym="ECK2632" /gene_synonym="JW5921" /db_xref="EcoGene:EG13205" CDS 2633409..2633852 /gene="yfjS" /locus_tag="b2636" /gene_synonym="ECK2632" /gene_synonym="JW5921" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; uncharacterized protein" /protein_id="AAC75684.2" /db_xref="GI:87082142" /db_xref="ASAP:ABE-0008680" /db_xref="UniProtKB/Swiss-Prot:O52982" /db_xref="EcoGene:EG13205" /translation="MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSD VVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNAL CIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE" gene 2633876..2634343 /gene="yfjT" /locus_tag="b2637" /gene_synonym="ECK2633" /gene_synonym="JW2618" /db_xref="EcoGene:EG13206" CDS 2633876..2634343 /gene="yfjT" /locus_tag="b2637" /gene_synonym="ECK2633" /gene_synonym="JW2618" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative periplasmic protein" /protein_id="AAC75685.1" /db_xref="GI:1788990" /db_xref="ASAP:ABE-0008683" /db_xref="UniProtKB/Swiss-Prot:P52135" /db_xref="EcoGene:EG13206" /translation="MKIRSLSRFVLASTMFASFTASAVPGLWQQGYGQGNAEYSVTDA SGKMFTINCTGNPDQNGIYQHSVFLILAGDKTVSSHDDSTGITVVMDHKQYAIPSTLG WRNGDNAWFSFIMDIRKARQFDVYVNDQKVGSFNPDVRNAQKVLPTLADCTND" gene complement(2634730..2634882) /gene="yfjU" /locus_tag="b2638" /gene_synonym="ECK2634" /gene_synonym="JW2619" /pseudo /db_xref="EcoGene:EG13207" CDS complement(2634730..2634882) /gene="yfjU" /locus_tag="b2638" /gene_synonym="ECK2634" /gene_synonym="JW2619" /note="CP4-57 prophage; conserved protein;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008685" /db_xref="UniProtKB/Swiss-Prot:P0CF86" /db_xref="EcoGene:EG13207" gene complement(2634895..2635910) /gene="yfjV" /locus_tag="b2641" /gene_synonym="ECK2635" /gene_synonym="JW5922" /gene_synonym="ypjL" /gene_synonym="ypjM" /pseudo /db_xref="EcoGene:EG13208" CDS complement(join(2634895..2635794,2635794..2635910)) /gene="yfjV" /locus_tag="b2641" /gene_synonym="ECK2635" /gene_synonym="JW5922" /gene_synonym="ypjL" /gene_synonym="ypjM" /note="pseudogene, CP4-57 prophage;Phage or Prophage Related; putative pump protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008687" /db_xref="ASAP:ABE-0008690" /db_xref="ASAP:ABE-0008692" /db_xref="UniProtKB/Swiss-Prot:P52137" /db_xref="EcoGene:EG13208" gene 2636046..2637749 /gene="yfjW" /locus_tag="b2642" /gene_synonym="ECK2638" /gene_synonym="JW2623" /db_xref="EcoGene:EG13209" CDS 2636046..2637749 /gene="yfjW" /locus_tag="b2642" /gene_synonym="ECK2638" /gene_synonym="JW2623" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative inner membrane protein" /protein_id="AAC75690.1" /db_xref="GI:2367146" /db_xref="ASAP:ABE-0008699" /db_xref="UniProtKB/Swiss-Prot:P52138" /db_xref="EcoGene:EG13209" /translation="MAFVSEREIVRKIFSKKIDFTILAFFYISSIFFLLCSGVLFQYF TAAFTKGNCYECSMKLDYIKQFYFSLETAWYLISAVAVFIASVFIQHRIKAYLTLLAI TWIVLTITDVALIHALDNIAMNNILLNILYNLFGAILLSLFMCLSNSLLFHLNKIKHI PMILSAMIPLVSAIIIAILITAVIYLLFARQAVEIEMDISEGSDIAYVGVKDNEESFG FLNDKKTDTPTYLDVIKNGSLIYNDTQGLSGADIYIVSGCYALPDLLRNVPLDAKKSF LNVKKLEITQKLPMMGFIQGESADVMPKAASRLSLSKQDDKFMLASSVTDSQIKFKSN NAQLMVAFAFMPITTNGILHDYTYDIIINDKKYKIENHVAPLSRLDKNKKMKCEYQQI SDLTNTYNINANYLTGFLLVLKPDDIINYNNSPSVLLKTDFAFYKKTYQKLDKIYDDI SNGKLSSLRATGISQFSINGKHLSLRPESEIIISEGSLYGLVNKSKKIKIYGTADLVF VDNKIMNLRKITYLQSKLEIFGSSIMDILKYIFGLGLLAISIKFIHSYFKNDVNENLF L" gene 2638273..2638544 /gene="ypjI" /locus_tag="b4644" /gene_synonym="ECK4438" /pseudo /db_xref="EcoGene:EG13309" CDS join(2638273..2638452,2638452..2638544) /gene="ypjI" /locus_tag="b4644" /gene_synonym="ECK4438" /note="pseudogene, CP4-57 putative prophage remnant;Phage or Prophage Related" /pseudo /codon_start=1 /transl_table=11 /db_xref="UniProtKB/Swiss-Prot:P58095" /db_xref="EcoGene:EG13309" gene 2638647..2639105 /gene="yfjX" /locus_tag="b2643" /gene_synonym="ECK2639" /gene_synonym="JW2624" /db_xref="EcoGene:EG13210" CDS 2638647..2639105 /gene="yfjX" /locus_tag="b2643" /gene_synonym="ECK2639" /gene_synonym="JW2624" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative antirestriction protein" /protein_id="AAC75691.1" /db_xref="GI:1788996" /db_xref="ASAP:ABE-0008704" /db_xref="UniProtKB/Swiss-Prot:P52139" /db_xref="EcoGene:EG13210" /translation="MTTQTQYDLVPANGSEFELSVTQVPDEQHIRFWPQHFGTIPQWI TLEPRIFAWMDRFCDEYCGGIWSFYTLSNGGAFMAPDADGDDKWHLLNGMNGNGAEMS AEAAGIAVCLIEYSHHACLTECDAMTEHYYRLRDYALQHPESSAIMRIID" gene 2639114..2639596 /gene="yfjY" /locus_tag="b2644" /gene_synonym="ECK2640" /gene_synonym="JW2625" /db_xref="EcoGene:EG13211" CDS 2639114..2639596 /gene="yfjY" /locus_tag="b2644" /gene_synonym="ECK2640" /gene_synonym="JW2625" /function="Phage or Prophage Related" /note="putative DNA repair protein" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; putative DNA repair protein" /protein_id="AAC75692.1" /db_xref="GI:1788997" /db_xref="ASAP:ABE-0008706" /db_xref="UniProtKB/Swiss-Prot:P52140" /db_xref="EcoGene:EG13211" /translation="MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQA ARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNA AAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL " gene 2639605..2639805 /gene="ypjJ" /locus_tag="b4548" /gene_synonym="ECK2641" /gene_synonym="JW5421" /db_xref="EcoGene:EG14330" CDS 2639605..2639805 /gene="ypjJ" /locus_tag="b4548" /gene_synonym="ECK2641" /gene_synonym="JW5421" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ABD18698.1" /db_xref="GI:87082144" /db_xref="ASAP:ABE-0285069" /db_xref="UniProtKB/Swiss-Prot:P58033" /db_xref="EcoGene:EG14330" /translation="MRIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVP DITGVLAVYAERRRTAADRMLD" gene 2639843..2640160 /gene="yfjZ" /locus_tag="b2645" /gene_synonym="ECK2642" /gene_synonym="JW2626" /db_xref="EcoGene:EG13212" CDS 2639843..2640160 /gene="yfjZ" /locus_tag="b2645" /gene_synonym="ECK2642" /gene_synonym="JW2626" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system" /protein_id="AAC75693.1" /db_xref="GI:1788998" /db_xref="ASAP:ABE-0008709" /db_xref="UniProtKB/Swiss-Prot:P52141" /db_xref="EcoGene:EG13212" /translation="MSNTTWGLQRDITPRLGARLVQEGNQLHYLADRASITGKFSDAE CPKLDVVFPHFISQIESMLTTGELNPRHAQCVTLYHNGFTCEADTLGSCGYVYIAVYP TQR" gene 2640181..2640510 /gene="ypjF" /locus_tag="b2646" /gene_synonym="ECK2643" /gene_synonym="JW2627" /db_xref="EcoGene:EG14284" CDS 2640181..2640510 /gene="ypjF" /locus_tag="b2646" /gene_synonym="ECK2643" /gene_synonym="JW2627" /function="Phage or Prophage Related" /codon_start=1 /transl_table=11 /product="CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system" /protein_id="AAC75694.1" /db_xref="GI:1788999" /db_xref="ASAP:ABE-0008711" /db_xref="UniProtKB/Swiss-Prot:Q46953" /db_xref="EcoGene:EG14284" /translation="MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFS DETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTG LLKTNVK" gene 2640700..2640713 /gene="psaA" /locus_tag="b4645" /gene_synonym="ECK4465" /pseudo /db_xref="EcoGene:EG31174" tmRNA 2640700..2640713 /gene="psaA" /locus_tag="b4645" /gene_synonym="ECK4465" /note="CP4-57 attachment site duplication, ssrA pseudogene" /pseudo /db_xref="EcoGene:EG31174" gene complement(2640874..2645454) /gene="ypjA" /locus_tag="b2647" /gene_synonym="ECK2644" /gene_synonym="JW5422" /db_xref="EcoGene:EG13213" CDS complement(2640874..2645454) /gene="ypjA" /locus_tag="b2647" /gene_synonym="ECK2644" /gene_synonym="JW5422" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="adhesin-like autotransporter" /protein_id="AAC75695.2" /db_xref="GI:87082145" /db_xref="ASAP:ABE-0008713" /db_xref="UniProtKB/Swiss-Prot:P52143" /db_xref="EcoGene:EG13213" /translation="MNRTSPYYCRRSVLSLLISALIYAPPGMAAFTTNVIGVVNDETV DGNQKVDERGTTNNTHIINHGQQNVHGGVSNGSLIESGGYQDIGSHNNFVGQANNTTI NGGRQSIHDGGISTGTTIESGNQDVYKGGISNGTTIKGGASRVEGGSANGILIDGGSQ IVKVQGHADGTTINKSGSQDVVQGSLATNTTINGGRQYVEQSTVETTTIKNGGEQRVY ESRALDTTIEGGTQSLNSKSTAKNTHIYSGGTQIVDNTSTSDVIEVYSGGVLDVRGGT ATNVTQHDGAILKTNTNGTTVSGTNSEGAFSIHNHVADNVLLENGGHLDINAYGSANK TIIKDKGTMSVLTNAKADATRIDNGGVMDVAGNATNTIINGGTQNINNYGIATGTNIN SGTQNIKSGGKADTTIISSGSRQVVEKDGTAIGSNISAGGSLIVYTGGIAHGVNQETG SALVANTGAGTDIEGYNKLSHFTITGGEANYVVLENTGELTVVAKTSAKNTTIDTGGK LIVQKEAKTDSTRLNNGGVLEVQDGGEAKHVEQQSGGALIASTTSGTLIEGTNSYGDA FYIRNSEAKNVVLENAGSLTVVTGSRAVDTIINANGKMDVYGKDVGTVLNSAGTQTIY ASATSDKANIKGGKQTVYGLATEANIESGEQIVDGGSTEKTHINGGTQTVQNYGKAIN TDIVSGLQQIMANGTAEGSIINGGSQVVNEGGLAENSVLNDGGTLDVREKGSATGIQQ SSQGALVATTRATRVTGTRADGVAFSIEQGAANNILLANGGVLTVESDTSSDKTQVNM GGREIVKTKATATGTTLTGGEQIVEGVANETTINDGGIQTVSANGEAIKTKINEGGTL TVNDNGKATDIVQNSGAALQTSTANGIEISGTHQYGTFSISGNLATNMLLENGGNLLV LAGTEARDSTVGKGGAMQNLGQDSATKVNSGGQYTLGRSKDEFQALARAEDLQVAGGT AIVYAGTLADASVSGATGSLSLMTPRDNVTPVKLEGAVRITDSATLTLGNGVDTTLAD LTAASRGSVWLNSNNSCAGTSNCEYRVNSLLLNDGDVYLSAQTAAPATTNGIYNTLTT NELSGSGNFYLHTNVAGSRGDQLVVNNNATGNFKIFVQDTGVSPQSDDAMTLVKTGGG DASFTLGNTGGFVDLGTYEYVLKSDGNSNWNLTNDVKPNPDPIPNPKPDPKPDPKPDP NPKPDPTPDPTPTPVPEKRITPSTAAVLNMAATLPLVFDAELNSIRERLNIMKASPHN NNVWGATYNTRNNVTTDAGAGFEQTLTGMTVGIDSRNDIPEGITTLGAFMGYSHSHIG FDRGGHGSVGSYSLGGYASWEHESGFYLDGVVKLNRFKSNVAGKMSSGGAANGSYHSN GLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMKSKSVDTRSIYRELGAT LSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVNSDGNFVNYLSGRRGIYQAGIKASF SSTLSGHLGVGYSHSAGVESPWNAVAGVNWSF" gene complement(2645793..2646032) /gene="pinH" /locus_tag="b2648" /gene_synonym="ECK2645" /gene_synonym="JW5423" /gene_synonym="ypjG" /pseudo /db_xref="EcoGene:EG14310" CDS complement(2645793..2646032) /gene="pinH" /locus_tag="b2648" /gene_synonym="ECK2645" /gene_synonym="JW5423" /gene_synonym="ypjG" /note="pseudogene, invertase resolvase family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008721" /db_xref="UniProtKB/Swiss-Prot:P76611" /db_xref="EcoGene:EG14310" gene complement(2646366..2647739) /gene="ypjC" /locus_tag="b2650" /gene_synonym="ECK2646" /gene_synonym="JW2629" /gene_synonym="ypjB" /pseudo /db_xref="EcoGene:EG13519" CDS complement(2646366..2647739) /gene="ypjC" /locus_tag="b2650" /gene_synonym="ECK2646" /gene_synonym="JW2629" /gene_synonym="ypjB" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008724" /db_xref="ASAP:ABE-0008727" /db_xref="UniProtKB/Swiss-Prot:P76613" /db_xref="EcoGene:EG13519" gene complement(2648490..2648565) /gene="ileY" /locus_tag="b2652" /gene_synonym="ECK2648" /gene_synonym="JWR0056" /db_xref="EcoGene:EG31121" tRNA complement(2648490..2648565) /gene="ileY" /locus_tag="b2652" /gene_synonym="ECK2648" /gene_synonym="JWR0056" /product="tRNA-Ile" /note="anticodon: GAU" /db_xref="ASAP:ABE-0008733" /db_xref="EcoGene:EG31121" gene 2649125..2651377 /gene="ygaQ" /locus_tag="b4462" /gene_synonym="ECK2649" /gene_synonym="JW5425" /gene_synonym="ygaR" /gene_synonym="yqaC" /gene_synonym="yqaD" /pseudo /db_xref="EcoGene:EG13520" CDS 2649125..2651377 /gene="ygaQ" /locus_tag="b4462" /gene_synonym="ECK2649" /gene_synonym="JW5425" /gene_synonym="ygaR" /gene_synonym="yqaC" /gene_synonym="yqaD" /note="uncharacterized protein; putative enzyme" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008739" /db_xref="ASAP:ABE-0008747" /db_xref="ASAP:ABE-0008751" /db_xref="ASAP:ABE-0174112" /db_xref="UniProtKB/Swiss-Prot:P76616" /db_xref="EcoGene:EG13520" gene 2651713..2652690 /gene="csiD" /locus_tag="b2659" /gene_synonym="csi-12" /gene_synonym="ECK2653" /gene_synonym="JW5427" /gene_synonym="ygaT" /db_xref="EcoGene:EG13523" CDS 2651713..2652690 /gene="csiD" /locus_tag="b2659" /gene_synonym="csi-12" /gene_synonym="ECK2653" /gene_synonym="JW5427" /gene_synonym="ygaT" /experiment="N-terminus verified by Edman degradation: PMID 9512707" /codon_start=1 /transl_table=11 /product="carbon starvation protein" /protein_id="AAC75706.2" /db_xref="GI:87082147" /db_xref="ASAP:ABE-0008754" /db_xref="UniProtKB/Swiss-Prot:P76621" /db_xref="EcoGene:EG13523" /translation="MNALTAVQNNAVDSGQDYSGFTLTPSAQSPRLLELTFTEQTTKQ FLEQVAEWPVQALEYKSFLRFRVAKILDDLCANQLQPLLLKTLLNRAEGALLINAVGV DDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPLARRPMRFAAPP SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYASNHYQTHQ" gene 2652710..2653978 /gene="lhgO" /locus_tag="b2660" /gene_synonym="ECK2654" /gene_synonym="JW2635" /gene_synonym="ygaF" /db_xref="EcoGene:EG12387" CDS 2652710..2653978 /gene="lhgO" /locus_tag="b2660" /gene_synonym="ECK2654" /gene_synonym="JW2635" /gene_synonym="ygaF" /codon_start=1 /transl_table=11 /product="L-2-hydroxyglutarate oxidase" /protein_id="AAC75707.2" /db_xref="GI:87082148" /db_xref="ASAP:ABE-0008756" /db_xref="UniProtKB/Swiss-Prot:P37339" /db_xref="EcoGene:EG12387" /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTG HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERM RALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQS RGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFI ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK VQTLLASQSNPGRTLRAARSVDALHAAFNQ" gene 2654001..2655449 /gene="gabD" /locus_tag="b2661" /gene_synonym="ECK2655" /gene_synonym="JW2636" /db_xref="EcoGene:EG11329" CDS 2654001..2655449 /gene="gabD" /locus_tag="b2661" /gene_synonym="ECK2655" /gene_synonym="JW2636" /EC_number="1.2.1.16" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="succinate-semialdehyde dehydrogenase, NADP-dependent activity; GO_process: GO:0009450 - gamma-aminobutyric acid catabolic process; GO_process: GO:0009447 - putrescine catabolic process" /codon_start=1 /transl_table=11 /product="succinate-semialdehyde dehydrogenase I, NADP-dependent" /protein_id="AAC75708.1" /db_xref="GI:1789015" /db_xref="ASAP:ABE-0008758" /db_xref="UniProtKB/Swiss-Prot:P25526" /db_xref="EcoGene:EG11329" /translation="MKLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPK MGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPL AEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGN ELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDE KAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLA PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL" gene 2655463..2656743 /gene="gabT" /locus_tag="b2662" /gene_synonym="ECK2656" /gene_synonym="JW2637" /db_xref="EcoGene:EG10361" CDS 2655463..2656743 /gene="gabT" /locus_tag="b2662" /gene_synonym="ECK2656" /gene_synonym="JW2637" /EC_number="2.6.1.19" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /experiment="N-terminus verified by Edman degradation: PMID 2178550" /note="4-aminobutyrate aminotransferase activity; GO_process: GO:0009450 - gamma-aminobutyric acid catabolic process; GO_process: GO:0009447 - putrescine catabolic process" /codon_start=1 /transl_table=11 /product="4-aminobutyrate aminotransferase, PLP-dependent" /protein_id="AAC75709.1" /db_xref="GI:1789016" /db_xref="ASAP:ABE-0008760" /db_xref="UniProtKB/Swiss-Prot:P22256" /db_xref="EcoGene:EG10361" /translation="MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYL DFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFA KKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMG LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASS PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPL AGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDG LLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ" repeat_region 2656756..2656891 /note="REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene 2656981..2658381 /gene="gabP" /locus_tag="b2663" /gene_synonym="ECK2657" /gene_synonym="JW2638" /db_xref="EcoGene:EG11330" CDS 2656981..2658381 /gene="gabP" /locus_tag="b2663" /gene_synonym="ECK2657" /gene_synonym="JW2638" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="transport permease protein of gamma-aminobutyrate; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="gamma-aminobutyrate transporter" /protein_id="AAC75710.1" /db_xref="GI:1789017" /db_xref="ASAP:ABE-0008763" /db_xref="UniProtKB/Swiss-Prot:P25527" /db_xref="EcoGene:EG11330" /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTGLLAIGIICTVPIMAR WKKLVLWQKTPVHNTR" gene 2658402..2659064 /gene="csiR" /locus_tag="b2664" /gene_synonym="ECK2658" /gene_synonym="gabC" /gene_synonym="JW2639" /gene_synonym="ygaE" /db_xref="EcoGene:EG12386" CDS 2658402..2659064 /gene="csiR" /locus_tag="b2664" /gene_synonym="ECK2658" /gene_synonym="gabC" /gene_synonym="JW2639" /gene_synonym="ygaE" /function="regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor of csiD" /protein_id="AAC75711.2" /db_xref="GI:87082149" /db_xref="ASAP:ABE-0008765" /db_xref="UniProtKB/Swiss-Prot:P37338" /db_xref="EcoGene:EG12386" /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEA DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA GN" gene complement(2659065..2659514) /gene="ygaU" /locus_tag="b2665" /gene_synonym="ECK2659" /gene_synonym="JW2640" /gene_synonym="yzzM" /db_xref="EcoGene:EG12675" CDS complement(2659065..2659514) /gene="ygaU" /locus_tag="b2665" /gene_synonym="ECK2659" /gene_synonym="JW2640" /gene_synonym="yzzM" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75712.1" /db_xref="GI:1789019" /db_xref="ASAP:ABE-0008767" /db_xref="UniProtKB/Swiss-Prot:P0ADE6" /db_xref="EcoGene:EG12675" /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDAD KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE" gene complement(2659598..2659756) /gene="yqaE" /locus_tag="b2666" /gene_synonym="ECK2660" /gene_synonym="JW2641" /db_xref="EcoGene:EG14313" CDS complement(2659598..2659756) /gene="yqaE" /locus_tag="b2666" /gene_synonym="ECK2660" /gene_synonym="JW2641" /codon_start=1 /transl_table=11 /product="cyaR sRNA-regulated protein" /protein_id="AAC75713.1" /db_xref="GI:1789020" /db_xref="ASAP:ABE-0008770" /db_xref="UniProtKB/Swiss-Prot:P0AE42" /db_xref="EcoGene:EG14313" /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH AFWVQTRD" gene 2659939..2660238 /gene="ygaV" /locus_tag="b2667" /gene_synonym="ECK2661" /gene_synonym="JW2642" /db_xref="EcoGene:EG13524" CDS 2659939..2660238 /gene="ygaV" /locus_tag="b2667" /gene_synonym="ECK2661" /gene_synonym="JW2642" /codon_start=1 /transl_table=11 /product="tributyltin-inducible repressor of ygaVP" /protein_id="AAC75714.1" /db_xref="GI:1789021" /db_xref="ASAP:ABE-0008784" /db_xref="UniProtKB/Swiss-Prot:P77295" /db_xref="EcoGene:EG13524" /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP" gene 2660248..2660772 /gene="ygaP" /locus_tag="b2668" /gene_synonym="ECK2662" /gene_synonym="JW2643" /db_xref="EcoGene:EG13288" CDS 2660248..2660772 /gene="ygaP" /locus_tag="b2668" /gene_synonym="ECK2662" /gene_synonym="JW2643" /codon_start=1 /transl_table=11 /product="DUF2892 family inner membrane rhodanese" /protein_id="AAC75715.1" /db_xref="GI:1789022" /db_xref="ASAP:ABE-0008786" /db_xref="UniProtKB/Swiss-Prot:P55734" /db_xref="EcoGene:EG13288" /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS VLEQSGLPAKLRHEQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLP VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG MARLLDKMPWNQRA" repeat_region 2660781..2660810 /note="REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2660819..2661223) /gene="stpA" /locus_tag="b2669" /gene_synonym="ECK2663" /gene_synonym="hnsB" /gene_synonym="hsm-3" /gene_synonym="JW2644" /gene_synonym="rsv" /db_xref="EcoGene:EG11554" CDS complement(2660819..2661223) /gene="stpA" /locus_tag="b2669" /gene_synonym="ECK2663" /gene_synonym="hnsB" /gene_synonym="hsm-3" /gene_synonym="JW2644" /gene_synonym="rsv" /function="regulator; Basic proteins - synthesis, modification" /note="DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="DNA binding protein, nucleoid-associated" /protein_id="AAC75716.1" /db_xref="GI:1789023" /db_xref="ASAP:ABE-0008788" /db_xref="UniProtKB/Swiss-Prot:P0ACG1" /db_xref="EcoGene:EG11554" /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI" gene 2661892..2662341 /gene="alaE" /locus_tag="b2670" /gene_synonym="ECK2664" /gene_synonym="JW2645" /gene_synonym="ygaW" /db_xref="EcoGene:EG13525" CDS 2661892..2662341 /gene="alaE" /locus_tag="b2670" /gene_synonym="ECK2664" /gene_synonym="JW2645" /gene_synonym="ygaW" /codon_start=1 /transl_table=11 /product="alanine exporter, alanine-inducible, stress-responsive" /protein_id="AAC75717.1" /db_xref="GI:1789025" /db_xref="ASAP:ABE-0008793" /db_xref="UniProtKB/Swiss-Prot:P64550" /db_xref="EcoGene:EG13525" /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA" gene complement(2662378..2662722) /gene="ygaC" /locus_tag="b2671" /gene_synonym="ECK2665" /gene_synonym="JW2646" /db_xref="EcoGene:EG12201" CDS complement(2662378..2662722) /gene="ygaC" /locus_tag="b2671" /gene_synonym="ECK2665" /gene_synonym="JW2646" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75718.1" /db_xref="GI:1789026" /db_xref="ASAP:ABE-0008795" /db_xref="UniProtKB/Swiss-Prot:P0AD53" /db_xref="EcoGene:EG12201" /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL ERYLNGLFGEAS" gene 2662874..2663203 /gene="ygaM" /locus_tag="b2672" /gene_synonym="ECK2666" /gene_synonym="JW2647" /db_xref="EcoGene:EG13285" CDS 2662874..2663203 /gene="ygaM" /locus_tag="b2672" /gene_synonym="ECK2666" /gene_synonym="JW2647" /codon_start=1 /transl_table=11 /product="putative membrane-anchored DUF883 family ribosome-binding protein" /protein_id="AAC75719.2" /db_xref="GI:452909628" /db_xref="ASAP:ABE-0008799" /db_xref="UniProtKB/Swiss-Prot:P0ADQ7" /db_xref="EcoGene:EG13285" /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA LLSMRKS" gene 2663451..2663696 /gene="nrdH" /locus_tag="b2673" /gene_synonym="ECK2667" /gene_synonym="JW2648" /gene_synonym="ygaN" /db_xref="EcoGene:EG13286" CDS 2663451..2663696 /gene="nrdH" /locus_tag="b2673" /gene_synonym="ECK2667" /gene_synonym="JW2648" /gene_synonym="ygaN" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /note="glutaredoxin-like protein; hydrogen donor" /codon_start=1 /transl_table=11 /product="hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein" /protein_id="AAC75720.1" /db_xref="GI:1789028" /db_xref="ASAP:ABE-0008802" /db_xref="UniProtKB/Swiss-Prot:P0AC65" /db_xref="EcoGene:EG13286" /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA" gene 2663693..2664103 /gene="nrdI" /locus_tag="b2674" /gene_synonym="ECK2668" /gene_synonym="JW2649" /gene_synonym="ygaO" /db_xref="EcoGene:EG13287" CDS 2663693..2664103 /gene="nrdI" /locus_tag="b2674" /gene_synonym="ECK2668" /gene_synonym="JW2649" /gene_synonym="ygaO" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /codon_start=1 /transl_table=11 /product="NrdEF cluster assembly flavodoxin" /protein_id="AAC75721.1" /db_xref="GI:1789029" /db_xref="ASAP:ABE-0008804" /db_xref="UniProtKB/Swiss-Prot:P0A772" /db_xref="EcoGene:EG13287" /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA" gene 2664076..2666220 /gene="nrdE" /locus_tag="b2675" /gene_synonym="ECK2669" /gene_synonym="JW2650" /db_xref="EcoGene:EG20257" CDS 2664076..2666220 /gene="nrdE" /locus_tag="b2675" /gene_synonym="ECK2669" /gene_synonym="JW2650" /EC_number="1.17.4.1" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase 2, alpha subunit" /protein_id="AAC75722.1" /db_xref="GI:1789030" /db_xref="ASAP:ABE-0008806" /db_xref="UniProtKB/Swiss-Prot:P39452" /db_xref="EcoGene:EG20257" /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF IATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTF LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPA TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL" gene 2666230..2667189 /gene="nrdF" /locus_tag="b2676" /gene_synonym="ECK2670" /gene_synonym="JW2651" /gene_synonym="ygaD" /db_xref="EcoGene:EG12381" CDS 2666230..2667189 /gene="nrdF" /locus_tag="b2676" /gene_synonym="ECK2670" /gene_synonym="JW2651" /gene_synonym="ygaD" /EC_number="1.17.4.1" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="ribonucleoside-diphosphate reductase 2, beta chain, frag; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein" /protein_id="AAC75723.1" /db_xref="GI:1789031" /db_xref="ASAP:ABE-0008808" /db_xref="UniProtKB/Swiss-Prot:P37146" /db_xref="EcoGene:EG12381" /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF" gene 2667543..2668745 /gene="proV" /locus_tag="b2677" /gene_synonym="ECK2671" /gene_synonym="JW2652" /gene_synonym="osrA" /gene_synonym="proU" /db_xref="EcoGene:EG10771" CDS 2667543..2668745 /gene="proV" /locus_tag="b2677" /gene_synonym="ECK2671" /gene_synonym="JW2652" /gene_synonym="osrA" /gene_synonym="proU" /function="transport; Transport of small molecules: Amino acids, amines" /note="ATP-binding component of transport system for glycine, betaine and proline; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0015596 - glycine betaine/proline porter activity; GO_process: GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter periplasmic binding protein" /protein_id="AAC75724.1" /db_xref="GI:1789032" /db_xref="ASAP:ABE-0008814" /db_xref="UniProtKB/Swiss-Prot:P14175" /db_xref="EcoGene:EG10771" /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL DREGVNNG" gene 2668738..2669802 /gene="proW" /locus_tag="b2678" /gene_synonym="ECK2672" /gene_synonym="JW2653" /gene_synonym="osrA" /gene_synonym="proU" /db_xref="EcoGene:EG10772" CDS 2668738..2669802 /gene="proW" /locus_tag="b2678" /gene_synonym="ECK2672" /gene_synonym="JW2653" /gene_synonym="osrA" /gene_synonym="proU" /function="transport; Transport of small molecules: Amino acids, amines" /note="high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015596 - glycine betaine/proline porter activity; GO_process: GO:0006561 - proline biosynthetic process" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter permease" /protein_id="AAC75725.1" /db_xref="GI:1789033" /db_xref="ASAP:ABE-0008816" /db_xref="UniProtKB/Swiss-Prot:P14176" /db_xref="EcoGene:EG10772" /translation="MADQNNPWDTTPAADSAAQSADAWGTPTTAPTDGGGADWLTSTP APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR GNRRWYTTGPVGLLTRPFIK" gene 2669860..2670852 /gene="proX" /locus_tag="b2679" /gene_synonym="ECK2673" /gene_synonym="JW2654" /gene_synonym="osrA" /gene_synonym="proU" /db_xref="EcoGene:EG10773" CDS 2669860..2670852 /gene="proX" /locus_tag="b2679" /gene_synonym="ECK2673" /gene_synonym="JW2654" /gene_synonym="osrA" /gene_synonym="proU" /function="transport; Osmotic adaptation" /note="high-affinity transport system for glycine betaine and proline; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_function: GO:0015596 - glycine betaine/proline porter activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006561 - proline biosynthetic process; GO_process: GO:0006545 - glycine biosynthetic process; GO_process: GO:0006578 - betaine biosynthetic process; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein" /protein_id="AAC75726.1" /db_xref="GI:1789034" /db_xref="ASAP:ABE-0008818" /db_xref="UniProtKB/Swiss-Prot:P0AFM2" /db_xref="EcoGene:EG10773" /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPG WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLF AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK" repeat_region 2670859..2670942 /note="REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 2671044..2672221 /gene="ygaY" /locus_tag="b2681" /gene_synonym="ECK2674" /gene_synonym="JW2655" /gene_synonym="ygaX" /pseudo /db_xref="EcoGene:EG13527" CDS join(2671044..2671304,2671298..2672221) /gene="ygaY" /locus_tag="b2681" /gene_synonym="ECK2674" /gene_synonym="JW2655" /gene_synonym="ygaX" /note="pseudogene, major facilitator transporter superfamily;putative transport; Not classified; putative transport protein; GO_process: GO:0006950 - response to stress" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0008822" /db_xref="ASAP:ABE-0008824" /db_xref="UniProtKB/Swiss-Prot:P76628" /db_xref="EcoGene:EG13527" gene 2672345..2673082 /gene="ygaZ" /locus_tag="b2682" /gene_synonym="ECK2676" /gene_synonym="JW2657" /db_xref="EcoGene:EG13528" CDS 2672345..2673082 /gene="ygaZ" /locus_tag="b2682" /gene_synonym="ECK2676" /gene_synonym="JW2657" /codon_start=1 /transl_table=11 /product="putative L-valine exporter, norvaline resistance protein" /protein_id="AAC75729.1" /db_xref="GI:1789038" /db_xref="ASAP:ABE-0008829" /db_xref="UniProtKB/Swiss-Prot:P76630" /db_xref="EcoGene:EG13528" /translation="MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWIAALTVMAMDVRHVLYGPSLRSRII QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP VAILAGIVCGCLTALIQAFWQGAPDEL" gene 2673072..2673407 /gene="ygaH" /locus_tag="b2683" /gene_synonym="ECK2677" /gene_synonym="JW2658" /db_xref="EcoGene:EG12940" CDS 2673072..2673407 /gene="ygaH" /locus_tag="b2683" /gene_synonym="ECK2677" /gene_synonym="JW2658" /codon_start=1 /transl_table=11 /product="putative L-valine exporter, norvaline resistance protein" /protein_id="AAC75730.1" /db_xref="GI:1789039" /db_xref="ASAP:ABE-0008831" /db_xref="UniProtKB/Swiss-Prot:P43667" /db_xref="EcoGene:EG12940" /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG LAWKVMAII" gene 2673498..2674028 /gene="mprA" /locus_tag="b2684" /gene_synonym="ECK2678" /gene_synonym="emrR" /gene_synonym="JW2659" /db_xref="EcoGene:EG10603" CDS 2673498..2674028 /gene="mprA" /locus_tag="b2684" /gene_synonym="ECK2678" /gene_synonym="emrR" /gene_synonym="JW2659" /function="regulator; Plasmid-related functions" /note="regulator of plasmid mcrB operon (microcin B17 synthesis); GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="transcriptional repressor of microcin B17 synthesis and multidrug efflux" /protein_id="AAC75731.1" /db_xref="GI:1789040" /db_xref="ASAP:ABE-0008834" /db_xref="UniProtKB/Swiss-Prot:P0ACR9" /db_xref="EcoGene:EG10603" /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS RLDQMEQDGVVLEAMS" gene 2674155..2675327 /gene="emrA" /locus_tag="b2685" /gene_synonym="ECK2679" /gene_synonym="JW2660" /db_xref="EcoGene:EG11354" CDS 2674155..2675327 /gene="emrA" /locus_tag="b2685" /gene_synonym="ECK2679" /gene_synonym="JW2660" /function="transport; Drug/analog sensitivity" /note="multidrug resistance secretion protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system" /protein_id="AAC75732.1" /db_xref="GI:1789041" /db_xref="ASAP:ABE-0008838" /db_xref="UniProtKB/Swiss-Prot:P27303" /db_xref="EcoGene:EG11354" /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI ISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG" gene 2675344..2676882 /gene="emrB" /locus_tag="b2686" /gene_synonym="ECK2680" /gene_synonym="JW2661" /db_xref="EcoGene:EG11439" CDS 2675344..2676882 /gene="emrB" /locus_tag="b2686" /gene_synonym="ECK2680" /gene_synonym="JW2661" /function="putative transport; Drug/analog sensitivity" /note="multidrug resistance; probably membrane translocase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="AAC75733.1" /db_xref="GI:1789042" /db_xref="ASAP:ABE-0008840" /db_xref="UniProtKB/Swiss-Prot:P0AEJ0" /db_xref="EcoGene:EG11439" /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG GGAH" gene complement(2676946..2677461) /gene="luxS" /locus_tag="b2687" /gene_synonym="ECK2681" /gene_synonym="JW2662" /gene_synonym="ygaG" /db_xref="EcoGene:EG12712" CDS complement(2676946..2677461) /gene="luxS" /locus_tag="b2687" /gene_synonym="ECK2681" /gene_synonym="JW2662" /gene_synonym="ygaG" /codon_start=1 /transl_table=11 /product="S-ribosylhomocysteine lyase" /protein_id="AAC75734.1" /db_xref="GI:1789043" /db_xref="ASAP:ABE-0008842" /db_xref="UniProtKB/Swiss-Prot:P45578" /db_xref="EcoGene:EG12712" /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN KEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA LPKEKLQELHI" gene 2677530..2677607 /gene="micA" /locus_tag="b4442" /gene_synonym="ECK2682" /gene_synonym="JWR0246" /gene_synonym="psrA10" /gene_synonym="sraD" /db_xref="EcoGene:EG31156" ncRNA 2677530..2677607 /ncRNA_class="antisense_RNA" /gene="micA" /locus_tag="b4442" /gene_synonym="ECK2682" /gene_synonym="JWR0246" /gene_synonym="psrA10" /gene_synonym="sraD" /product="sRNA antisense regulator of ompA, lamB, ompX, and phoP; Hfq-dependent" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047262" /db_xref="EcoGene:EG31156" gene complement(2677611..2679167) /gene="gshA" /locus_tag="b2688" /gene_synonym="ECK2683" /gene_synonym="gshI" /gene_synonym="JW2663" /db_xref="EcoGene:EG10418" CDS complement(2677611..2679167) /gene="gshA" /locus_tag="b2688" /gene_synonym="ECK2683" /gene_synonym="gshI" /gene_synonym="JW2663" /EC_number="6.3.2.2" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 2872655" /note="GO_process: GO:0006750 - glutathione biosynthetic process" /codon_start=1 /transl_table=11 /product="glutamate-cysteine ligase" /protein_id="AAC75735.1" /db_xref="GI:1789044" /db_xref="ASAP:ABE-0008845" /db_xref="UniProtKB/Swiss-Prot:P0A6W9" /db_xref="EcoGene:EG10418" /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW QAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSAR ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMEAADTE PFAVWLEKHA" gene complement(2679240..2679668) /gene="yqaA" /locus_tag="b2689" /gene_synonym="ECK2684" /gene_synonym="JW2664" /db_xref="EcoGene:EG13529" CDS complement(2679240..2679668) /gene="yqaA" /locus_tag="b2689" /gene_synonym="ECK2684" /gene_synonym="JW2664" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="COG1238 family inner membrane protein" /protein_id="AAC75736.1" /db_xref="GI:1789045" /db_xref="ASAP:ABE-0008847" /db_xref="UniProtKB/Swiss-Prot:P0ADR0" /db_xref="EcoGene:EG13529" /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLV LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH" gene complement(2679665..2680231) /gene="yqaB" /locus_tag="b2690" /gene_synonym="ECK2685" /gene_synonym="JW2665" /db_xref="EcoGene:EG13530" CDS complement(2679665..2680231) /gene="yqaB" /locus_tag="b2690" /gene_synonym="ECK2685" /gene_synonym="JW2665" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="fructose-1-P and 6-phosphogluconate phosphatase" /protein_id="AAC75737.1" /db_xref="GI:1789046" /db_xref="ASAP:ABE-0008850" /db_xref="UniProtKB/Swiss-Prot:P77475" /db_xref="EcoGene:EG13530" /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMI ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVDVVKSWHGR RPMAVGTGSESAIAEALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT QCVVFEDADFGIQAARAAGMDAVDVRLL" gene complement(2680512..2680588) /gene="argQ" /locus_tag="b2691" /gene_synonym="argVdelta" /gene_synonym="ECK2686" /gene_synonym="JWR0057" /db_xref="EcoGene:EG30013" tRNA complement(2680512..2680588) /gene="argQ" /locus_tag="b2691" /gene_synonym="argVdelta" /gene_synonym="ECK2686" /gene_synonym="JWR0057" /product="tRNA-Arg" /note="anticodon: ACG" /db_xref="ASAP:ABE-0008856" /db_xref="EcoGene:EG30013" gene complement(2680787..2680863) /gene="argZ" /locus_tag="b2692" /gene_synonym="argVgamma" /gene_synonym="ECK2687" /gene_synonym="JWR0058" /db_xref="EcoGene:EG30019" tRNA complement(2680787..2680863) /gene="argZ" /locus_tag="b2692" /gene_synonym="argVgamma" /gene_synonym="ECK2687" /gene_synonym="JWR0058" /product="tRNA-Arg" /note="anticodon: ACG" /db_xref="ASAP:ABE-0008858" /db_xref="EcoGene:EG30019" gene complement(2680926..2681002) /gene="argY" /locus_tag="b2693" /gene_synonym="argVbeta" /gene_synonym="ECK2688" /gene_synonym="JWR0059" /db_xref="EcoGene:EG30018" tRNA complement(2680926..2681002) /gene="argY" /locus_tag="b2693" /gene_synonym="argVbeta" /gene_synonym="ECK2688" /gene_synonym="JWR0059" /product="tRNA-Arg" /note="anticodon: ACG" /db_xref="ASAP:ABE-0008860" /db_xref="EcoGene:EG30018" gene complement(2681201..2681277) /gene="argV" /locus_tag="b2694" /gene_synonym="argValpha" /gene_synonym="ECK2689" /gene_synonym="JWR0060" /db_xref="EcoGene:EG30015" tRNA complement(2681201..2681277) /gene="argV" /locus_tag="b2694" /gene_synonym="argValpha" /gene_synonym="ECK2689" /gene_synonym="JWR0060" /product="tRNA-Arg" /note="anticodon: ACG" /db_xref="ASAP:ABE-0008862" /db_xref="EcoGene:EG30015" gene complement(2681281..2681373) /gene="serV" /locus_tag="b2695" /gene_synonym="ECK2690" /gene_synonym="JWR0061" /gene_synonym="supD" /db_xref="EcoGene:EG30095" tRNA complement(2681281..2681373) /gene="serV" /locus_tag="b2695" /gene_synonym="ECK2690" /gene_synonym="JWR0061" /gene_synonym="supD" /product="tRNA-Ser" /note="anticodon: GCU" /db_xref="ASAP:ABE-0008864" /db_xref="EcoGene:EG30095" gene complement(2681689..2681874) /gene="csrA" /locus_tag="b2696" /gene_synonym="ECK2691" /gene_synonym="JW2666" /gene_synonym="zfiA" /db_xref="EcoGene:EG11447" CDS complement(2681689..2681874) /gene="csrA" /locus_tag="b2696" /gene_synonym="ECK2691" /gene_synonym="JW2666" /gene_synonym="zfiA" /function="regulator; Global regulatory functions" /note="carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006094 - gluconeogenesis; GO_process: GO:0006401 - RNA catabolic process; GO_process: GO:0009386 - translational attenuation; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="pleiotropic regulatory protein for carbon source metabolism" /protein_id="AAC75738.1" /db_xref="GI:1789047" /db_xref="ASAP:ABE-0008866" /db_xref="UniProtKB/Swiss-Prot:P69913" /db_xref="EcoGene:EG11447" /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR EEIYQRIQAEKSQQSSY" gene complement(2682109..2684739) /gene="alaS" /locus_tag="b2697" /gene_synonym="act" /gene_synonym="ala-act" /gene_synonym="ECK2692" /gene_synonym="JW2667" /gene_synonym="lovB" /db_xref="EcoGene:EG10034" CDS complement(2682109..2684739) /gene="alaS" /locus_tag="b2697" /gene_synonym="act" /gene_synonym="ala-act" /gene_synonym="ECK2692" /gene_synonym="JW2667" /gene_synonym="lovB" /EC_number="6.1.1.7" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /protein_id="AAC75739.1" /db_xref="GI:1789048" /db_xref="ASAP:ABE-0008869" /db_xref="UniProtKB/Swiss-Prot:P00957" /db_xref="EcoGene:EG10034" /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD KGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI ISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG STIIVLATVVEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD AAALPAALASVKGWVSAKLQ" gene complement(2684867..2685367) /gene="recX" /locus_tag="b2698" /gene_synonym="ECK2693" /gene_synonym="JW2668" /gene_synonym="oraA" /db_xref="EcoGene:EG12080" CDS complement(2684867..2685367) /gene="recX" /locus_tag="b2698" /gene_synonym="ECK2693" /gene_synonym="JW2668" /gene_synonym="oraA" /function="putative regulator; Not classified" /note="regulator, OraA protein" /codon_start=1 /transl_table=11 /product="regulatory protein for RecA" /protein_id="AAC75740.1" /db_xref="GI:1789050" /db_xref="ASAP:ABE-0008872" /db_xref="UniProtKB/Swiss-Prot:P33596" /db_xref="EcoGene:EG12080" /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQEI WRNFAD" gene complement(2685436..2686497) /gene="recA" /locus_tag="b2699" /gene_synonym="ECK2694" /gene_synonym="JW2669" /gene_synonym="lexB" /gene_synonym="recH" /gene_synonym="rnmB" /gene_synonym="srf" /gene_synonym="tif" /gene_synonym="umuB" /gene_synonym="umuR" /gene_synonym="zab" /db_xref="EcoGene:EG10823" CDS complement(2685436..2686497) /gene="recA" /locus_tag="b2699" /gene_synonym="ECK2694" /gene_synonym="JW2669" /gene_synonym="lexB" /gene_synonym="recH" /gene_synonym="rnmB" /gene_synonym="srf" /gene_synonym="tif" /gene_synonym="umuB" /gene_synonym="umuR" /gene_synonym="zab" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0008233 - peptidase activity; GO_process: GO:0006310 - DNA recombination; GO_process: GO:0006281 - DNA repair; GO_process: GO:0006508 - proteolysis; GO_process: GO:0009432 - SOS response" /codon_start=1 /transl_table=11 /product="DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor" /protein_id="AAC75741.1" /db_xref="GI:1789051" /db_xref="ASAP:ABE-0008876" /db_xref="UniProtKB/Swiss-Prot:P0A7G6" /db_xref="EcoGene:EG10823" /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS TPDFSVDDSEGVAETNEDF" gene complement(2686577..2687074) /gene="pncC" /locus_tag="b2700" /gene_synonym="ECK2695" /gene_synonym="JW2670" /gene_synonym="ygaD" /db_xref="EcoGene:EG12698" CDS complement(2686577..2687074) /gene="pncC" /locus_tag="b2700" /gene_synonym="ECK2695" /gene_synonym="JW2670" /gene_synonym="ygaD" /EC_number="3.5.1.42" /function="enzyme; NMN catabolism" /codon_start=1 /transl_table=11 /product="nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase" /protein_id="AAC75742.1" /db_xref="GI:1789052" /db_xref="ASAP:ABE-0008882" /db_xref="UniProtKB/Swiss-Prot:P0A6G3" /db_xref="EcoGene:EG12698" /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSI SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ FLQNT" gene complement(2687219..2688304) /gene="mltB" /locus_tag="b2701" /gene_synonym="ECK2696" /gene_synonym="JW2671" /db_xref="EcoGene:EG12699" CDS complement(2687219..2688304) /gene="mltB" /locus_tag="b2701" /gene_synonym="ECK2696" /gene_synonym="JW2671" /EC_number="3.2.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase B" /protein_id="AAC75743.1" /db_xref="GI:1789053" /db_xref="ASAP:ABE-0008885" /db_xref="UniProtKB/Swiss-Prot:P41052" /db_xref="EcoGene:EG12699" /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQ HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN GQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT ITRYNHSTHYAMAVWQLGQAVALARVQ" gene 2688560..2689123 /gene="srlA" /locus_tag="b2702" /gene_synonym="ECK2697" /gene_synonym="gutA" /gene_synonym="JW5429" /gene_synonym="sbl" /db_xref="EcoGene:EG10969" CDS 2688560..2689123 /gene="srlA" /locus_tag="b2702" /gene_synonym="ECK2697" /gene_synonym="gutA" /gene_synonym="JW5429" /gene_synonym="sbl" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, glucitol/sorbitol-specific IIC component, one of two; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucitol/sorbitol-specific enzyme IIC component of PTS" /protein_id="AAT48148.1" /db_xref="GI:48994904" /db_xref="ASAP:ABE-0008890" /db_xref="UniProtKB/Swiss-Prot:P56579" /db_xref="EcoGene:EG10969" /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAA ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV TDLTTAIFEKKMGIQLEQKVHLAGATS" gene 2689120..2690079 /gene="srlE" /locus_tag="b2703" /gene_synonym="ECK2698" /gene_synonym="gutA" /gene_synonym="gutE" /gene_synonym="JW5430" /gene_synonym="sbl" /gene_synonym="srlA" /db_xref="EcoGene:EG14373" CDS 2689120..2690079 /gene="srlE" /locus_tag="b2703" /gene_synonym="ECK2698" /gene_synonym="gutA" /gene_synonym="gutE" /gene_synonym="JW5430" /gene_synonym="sbl" /gene_synonym="srlA" /EC_number="2.7.1.69" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucitol/sorbitol-specific enzyme IIB component of PTS" /protein_id="AAT48149.1" /db_xref="GI:48994905" /db_xref="ASAP:ABE-0008892" /db_xref="UniProtKB/Swiss-Prot:P56580" /db_xref="EcoGene:EG14373" /translation="MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQ LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSTVA VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ" gene 2690090..2690461 /gene="srlB" /locus_tag="b2704" /gene_synonym="ECK2699" /gene_synonym="gutB" /gene_synonym="JW2673" /db_xref="EcoGene:EG10970" CDS 2690090..2690461 /gene="srlB" /locus_tag="b2704" /gene_synonym="ECK2699" /gene_synonym="gutB" /gene_synonym="JW2673" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, glucitol/sorbitol-specific enzyme IIA component; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucitol/sorbitol-specific enzyme IIA component of PTS" /protein_id="AAC75746.1" /db_xref="GI:1789056" /db_xref="ASAP:ABE-0008894" /db_xref="UniProtKB/Swiss-Prot:P05706" /db_xref="EcoGene:EG10970" /translation="MTVIYQTTITRIGASAIDALSDQMLITFREGAPADLEEYCFIHC HGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV AGPVPDDIAPGSVLKFESVKE" gene 2690465..2691244 /gene="srlD" /locus_tag="b2705" /gene_synonym="ECK2700" /gene_synonym="gutD" /gene_synonym="JW2674" /db_xref="EcoGene:EG10971" CDS 2690465..2691244 /gene="srlD" /locus_tag="b2705" /gene_synonym="ECK2700" /gene_synonym="gutD" /gene_synonym="JW2674" /EC_number="1.1.1.140" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 6384188" /note="glucitol (sorbitol)-6-phosphate dehydrogenase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="sorbitol-6-phosphate dehydrogenase" /protein_id="AAC75747.1" /db_xref="GI:1789057" /db_xref="ASAP:ABE-0008896" /db_xref="UniProtKB/Swiss-Prot:P05707" /db_xref="EcoGene:EG10971" /translation="MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQ EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF" repeat_region 2691289..2691317 /note="REP194 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2691349..2691708 /gene="srlM" /locus_tag="b2706" /gene_synonym="ECK2701" /gene_synonym="gutM" /gene_synonym="JW2675" /db_xref="EcoGene:EG10972" CDS 2691349..2691708 /gene="srlM" /locus_tag="b2706" /gene_synonym="ECK2701" /gene_synonym="gutM" /gene_synonym="JW2675" /function="regulator; Degradation of small molecules: Carbon compounds" /note="glucitol operon activator; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="sorbitol=responsive srl operon transcriptional activator" /protein_id="AAC75748.1" /db_xref="GI:1789058" /db_xref="ASAP:ABE-0008898" /db_xref="UniProtKB/Swiss-Prot:P15081" /db_xref="EcoGene:EG10972" /translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGR SSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH DPLSQNALSLALKLKRG" gene 2691775..2692548 /gene="srlR" /locus_tag="b2707" /gene_synonym="ECK2702" /gene_synonym="gutR" /gene_synonym="JW2676" /db_xref="EcoGene:EG10974" CDS 2691775..2692548 /gene="srlR" /locus_tag="b2707" /gene_synonym="ECK2702" /gene_synonym="gutR" /gene_synonym="JW2676" /function="regulator; Degradation of small molecules: Carbon compounds" /note="regulator for gut (srl), glucitol operon; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="sorbitol-inducible srl operon transcriptional repressor" /protein_id="AAC75749.1" /db_xref="GI:1789059" /db_xref="ASAP:ABE-0008900" /db_xref="UniProtKB/Swiss-Prot:P15082" /db_xref="EcoGene:EG10974" /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA FEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE" gene 2692541..2693506 /gene="srlQ" /locus_tag="b2708" /gene_synonym="ECK2703" /gene_synonym="gutQ" /gene_synonym="JW5431" /db_xref="EcoGene:EG10973" CDS 2692541..2693506 /gene="srlQ" /locus_tag="b2708" /gene_synonym="ECK2703" /gene_synonym="gutQ" /gene_synonym="JW5431" /codon_start=1 /transl_table=11 /product="D-arabinose 5-phosphate isomerase" /protein_id="AAC75750.2" /db_xref="GI:87082151" /db_xref="ASAP:ABE-0008902" /db_xref="UniProtKB/Swiss-Prot:P17115" /db_xref="EcoGene:EG10973" /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTL QSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII" gene complement(2693503..2695017) /gene="norR" /locus_tag="b2709" /gene_synonym="ECK2704" /gene_synonym="JW5843" /gene_synonym="ygaA" /db_xref="EcoGene:EG12108" CDS complement(2693503..2695017) /gene="norR" /locus_tag="b2709" /gene_synonym="ECK2704" /gene_synonym="JW5843" /gene_synonym="ygaA" /function="regulator; Not classified" /note="putative 2-component transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="anaerobic nitric oxide reductase DNA-binding transcriptional activator" /protein_id="AAC75751.2" /db_xref="GI:87082152" /db_xref="ASAP:ABE-0008904" /db_xref="UniProtKB/Swiss-Prot:P37013" /db_xref="EcoGene:EG12108" /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL RYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA LLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREE VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGAR NLLQHYSFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPTPEVAAVP VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD" gene 2695204..2696643 /gene="norV" /locus_tag="b2710" /gene_synonym="ECK2705" /gene_synonym="flrd" /gene_synonym="JW2680" /gene_synonym="ygaI" /gene_synonym="ygaJ" /gene_synonym="ygaK" /db_xref="EcoGene:EG12963" CDS 2695204..2696643 /gene="norV" /locus_tag="b2710" /gene_synonym="ECK2705" /gene_synonym="flrd" /gene_synonym="JW2680" /gene_synonym="ygaI" /gene_synonym="ygaJ" /gene_synonym="ygaK" /function="putative enzyme; Not classified" /note="putative flavodoxin; GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="anaerobic nitric oxide reductase flavorubredoxin" /protein_id="AAC75752.1" /db_xref="GI:1789064" /db_xref="ASAP:ABE-0008910" /db_xref="UniProtKB/Swiss-Prot:Q46877" /db_xref="EcoGene:EG12963" /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALKLCREHGREI ARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT PWSEVPDNFLCPECSLGKDVFEELASEAK" gene 2696640..2697773 /gene="norW" /locus_tag="b2711" /gene_synonym="ECK2706" /gene_synonym="JW2681" /gene_synonym="ygaL" /gene_synonym="ygbD" /db_xref="EcoGene:EG12450" CDS 2696640..2697773 /gene="norW" /locus_tag="b2711" /gene_synonym="ECK2706" /gene_synonym="JW2681" /gene_synonym="ygaL" /gene_synonym="ygbD" /EC_number="1.18.1.-" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="NADH:flavorubredoxin oxidoreductase" /protein_id="AAC75753.1" /db_xref="GI:1789065" /db_xref="ASAP:ABE-0008912" /db_xref="UniProtKB/Swiss-Prot:P37596" /db_xref="EcoGene:EG12450" /translation="MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKP DLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDK LVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQA TLDRQRNIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNTDIYALGDCAE INGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLR WQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM" repeat_region 2697795..2697876 /note="REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2697901..2700153) /gene="hypF" /locus_tag="b2712" /gene_synonym="ECK2707" /gene_synonym="hydA" /gene_synonym="JW5433" /db_xref="EcoGene:EG11551" CDS complement(2697901..2700153) /gene="hypF" /locus_tag="b2712" /gene_synonym="ECK2707" /gene_synonym="hydA" /gene_synonym="JW5433" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="transcriptional regulatory protein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein" /protein_id="AAC75754.1" /db_xref="GI:2367152" /db_xref="ASAP:ABE-0008915" /db_xref="UniProtKB/Swiss-Prot:P30131" /db_xref="EcoGene:EG11551" /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD GVEVRLREDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQI VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAI KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA LAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMRE QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA RWLAGEVQNG" repeat_region 2700193..2700219 /note="REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2700306..2700833) /gene="hydN" /locus_tag="b2713" /gene_synonym="ECK2708" /gene_synonym="JW2683" /db_xref="EcoGene:EG11552" CDS complement(2700306..2700833) /gene="hydN" /locus_tag="b2713" /gene_synonym="ECK2708" /gene_synonym="JW2683" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="involved in electron transport from formate to hydrogen, Fe-S centers; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit" /protein_id="AAC75755.1" /db_xref="GI:1789067" /db_xref="ASAP:ABE-0008919" /db_xref="UniProtKB/Swiss-Prot:P0AAK4" /db_xref="EcoGene:EG11552" /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL EQLSAEKRRRTALMF" gene complement(2700982..2701992) /gene="ascG" /locus_tag="b2714" /gene_synonym="ECK2709" /gene_synonym="JW5434" /gene_synonym="sac" /db_xref="EcoGene:EG10087" CDS complement(2700982..2701992) /gene="ascG" /locus_tag="b2714" /gene_synonym="ECK2709" /gene_synonym="JW5434" /gene_synonym="sac" /function="regulator; Degradation of small molecules: Carbon compounds" /note="ascBF operon repressor; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="asc operon transcriptional repressor; prpBC operon repressor" /protein_id="AAC75756.2" /db_xref="GI:345297177" /db_xref="ASAP:ABE-0008922" /db_xref="UniProtKB/Swiss-Prot:P24242" /db_xref="EcoGene:EG10087" /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA NGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD DIAIAPYTVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAP SR" gene 2702252..2703709 /gene="ascF" /locus_tag="b2715" /gene_synonym="ECK2710" /gene_synonym="JW5435" /gene_synonym="sac" /db_xref="EcoGene:EG10086" CDS 2702252..2703709 /gene="ascF" /locus_tag="b2715" /gene_synonym="ECK2710" /gene_synonym="JW5435" /gene_synonym="sac" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="cellobiose/arbutin/salicin-specific PTS enzymes, IIB and IC components" /protein_id="AAT48150.1" /db_xref="GI:48994906" /db_xref="ASAP:ABE-0008926" /db_xref="UniProtKB/Swiss-Prot:P24241" /db_xref="EcoGene:EG10086" /translation="MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDS PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRI GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT YTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS AISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL TLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN" gene 2703718..2705142 /gene="ascB" /locus_tag="b2716" /gene_synonym="ECK2711" /gene_synonym="JW2686" /gene_synonym="sac" /db_xref="EcoGene:EG10085" CDS 2703718..2705142 /gene="ascB" /locus_tag="b2716" /gene_synonym="ECK2711" /gene_synonym="JW2686" /gene_synonym="sac" /EC_number="3.2.1.86" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="6-phospho-beta-glucosidase; cryptic; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="cryptic 6-phospho-beta-glucosidase" /protein_id="AAC75758.1" /db_xref="GI:1789070" /db_xref="ASAP:ABE-0008928" /db_xref="UniProtKB/Swiss-Prot:P24240" /db_xref="EcoGene:EG10085" /translation="MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMA VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA LATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPA YSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYR ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGT LTRTRKKSFWWYKKVIASNGEDLE" repeat_region 2705151..2705229 /note="REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2705301..2705771) /gene="hycI" /locus_tag="b2717" /gene_synonym="ECK2712" /gene_synonym="JW2687" /db_xref="EcoGene:EG13396" CDS complement(2705301..2705771) /gene="hycI" /locus_tag="b2717" /gene_synonym="ECK2712" /gene_synonym="JW2687" /EC_number="3.4.-.-" /function="enzyme; Degradation of proteins, peptides, glyco" /note="protease involved in processing C-terminal end of the large subunit of hydrogenase 3; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="protease involved in processing C-terminal end of HycE" /protein_id="AAC75759.1" /db_xref="GI:1789072" /db_xref="ASAP:ABE-0008931" /db_xref="UniProtKB/Swiss-Prot:P0AEV9" /db_xref="EcoGene:EG13396" /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE" gene complement(2705764..2706174) /gene="hycH" /locus_tag="b2718" /gene_synonym="ECK2713" /gene_synonym="hevH" /gene_synonym="JW2688" /db_xref="EcoGene:EG10481" CDS complement(2705764..2706174) /gene="hycH" /locus_tag="b2718" /gene_synonym="ECK2713" /gene_synonym="hevH" /gene_synonym="JW2688" /function="factor; Energy metabolism, carbon: Fermentation" /note="processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex); GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="hydrogenase 3 maturation protein" /protein_id="AAC75760.1" /db_xref="GI:1789073" /db_xref="ASAP:ABE-0008933" /db_xref="UniProtKB/Swiss-Prot:P0AEV7" /db_xref="EcoGene:EG10481" /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD" gene complement(2706171..2706938) /gene="hycG" /locus_tag="b2719" /gene_synonym="ECK2714" /gene_synonym="hevG" /gene_synonym="JW2689" /db_xref="EcoGene:EG10480" CDS complement(2706171..2706938) /gene="hycG" /locus_tag="b2719" /gene_synonym="ECK2714" /gene_synonym="hevG" /gene_synonym="JW2689" /EC_number="1.12.7.2" /function="phenotype; Energy metabolism, carbon: Fermentation" /note="hydrogenase activity; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 3 and formate hydrogenase complex, HycG subunit" /protein_id="AAC75761.1" /db_xref="GI:1789074" /db_xref="ASAP:ABE-0008936" /db_xref="UniProtKB/Swiss-Prot:P16433" /db_xref="EcoGene:EG10480" /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQ LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR" gene complement(2706938..2707480) /gene="hycF" /locus_tag="b2720" /gene_synonym="ECK2715" /gene_synonym="hevF" /gene_synonym="JW2690" /db_xref="EcoGene:EG10479" CDS complement(2706938..2707480) /gene="hycF" /locus_tag="b2720" /gene_synonym="ECK2715" /gene_synonym="hevF" /gene_synonym="JW2690" /EC_number="1.12.7.2" /function="putative enzyme; Energy metabolism, carbon: Fermentation" /note="probable iron-sulfur protein of hydrogenase 3 (part of FHL complex); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase complex iron-sulfur protein" /protein_id="AAC75762.1" /db_xref="GI:1789075" /db_xref="ASAP:ABE-0008942" /db_xref="UniProtKB/Swiss-Prot:P16432" /db_xref="EcoGene:EG10479" /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA ACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWK KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR QKCLVPSDRIELTRHMKEAI" gene complement(2707490..2709199) /gene="hycE" /locus_tag="b2721" /gene_synonym="ECK2716" /gene_synonym="hevE" /gene_synonym="JW2691" /db_xref="EcoGene:EG10478" CDS complement(2707490..2709199) /gene="hycE" /locus_tag="b2721" /gene_synonym="ECK2716" /gene_synonym="hevE" /gene_synonym="JW2691" /EC_number="1.12.7.2" /function="enzyme; Energy metabolism, carbon: Fermentation" /experiment="N-terminus verified by Edman degradation: PMID 8125094" /note="large subunit of hydrogenase 3 (part of FHL complex); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 3, large subunit" /protein_id="AAC75763.1" /db_xref="GI:1789076" /db_xref="ASAP:ABE-0008944" /db_xref="UniProtKB/Swiss-Prot:P16431" /db_xref="EcoGene:EG10478" /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPE VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYP SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS PLK" gene complement(2709217..2710140) /gene="hycD" /locus_tag="b2722" /gene_synonym="ECK2717" /gene_synonym="hevD" /gene_synonym="JW2692" /db_xref="EcoGene:EG10477" CDS complement(2709217..2710140) /gene="hycD" /locus_tag="b2722" /gene_synonym="ECK2717" /gene_synonym="hevD" /gene_synonym="JW2692" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="membrane-spanning protein of hydrogenase 3 (part of FHL complex); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="hydrogenase 3, membrane subunit" /protein_id="AAC75764.1" /db_xref="GI:1789077" /db_xref="ASAP:ABE-0008946" /db_xref="UniProtKB/Swiss-Prot:P16430" /db_xref="EcoGene:EG10477" /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN SMARLRLDITPRITWAGFGFAFLAFVSLLAA" gene complement(2710143..2711969) /gene="hycC" /locus_tag="b2723" /gene_synonym="ECK2718" /gene_synonym="hevC" /gene_synonym="JW2693" /db_xref="EcoGene:EG10476" CDS complement(2710143..2711969) /gene="hycC" /locus_tag="b2723" /gene_synonym="ECK2718" /gene_synonym="hevC" /gene_synonym="JW2693" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="membrane-spanning protein of hydrogenase 3 (part of FHL complex); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="hydrogenase 3, membrane subunit" /protein_id="AAC75765.1" /db_xref="GI:2367154" /db_xref="ASAP:ABE-0008948" /db_xref="UniProtKB/Swiss-Prot:P16429" /db_xref="EcoGene:EG10476" /translation="MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSL YTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHA QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRL GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV PQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGL YALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSL FKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW VIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLI ACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKL RKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA" gene complement(2711966..2712577) /gene="hycB" /locus_tag="b2724" /gene_synonym="ECK2719" /gene_synonym="hevB" /gene_synonym="JW2694" /db_xref="EcoGene:EG10475" CDS complement(2711966..2712577) /gene="hycB" /locus_tag="b2724" /gene_synonym="ECK2719" /gene_synonym="hevB" /gene_synonym="JW2694" /EC_number="1.12.7.2" /function="putative enzyme; Energy metabolism, carbon: Fermentation" /note="probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex); GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 3, Fe-S subunit" /protein_id="AAC75766.1" /db_xref="GI:1789079" /db_xref="ASAP:ABE-0008950" /db_xref="UniProtKB/Swiss-Prot:P0AAK1" /db_xref="EcoGene:EG10475" /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK ESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS RPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK" gene complement(2712702..2713163) /gene="hycA" /locus_tag="b2725" /gene_synonym="ECK2720" /gene_synonym="hevA" /gene_synonym="JW2695" /db_xref="EcoGene:EG10474" CDS complement(2712702..2713163) /gene="hycA" /locus_tag="b2725" /gene_synonym="ECK2720" /gene_synonym="hevA" /gene_synonym="JW2695" /function="regulator; Energy metabolism, carbon: Fermentation" /note="transcriptional repression of hyc and hyp operons; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006113 - fermentation; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="regulator of the transcriptional regulator FhlA" /protein_id="AAC75767.1" /db_xref="GI:1789080" /db_xref="ASAP:ABE-0008952" /db_xref="UniProtKB/Swiss-Prot:P0AEV4" /db_xref="EcoGene:EG10474" /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGM IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA" gene 2713375..2713725 /gene="hypA" /locus_tag="b2726" /gene_synonym="ECK2721" /gene_synonym="JW2696" /db_xref="EcoGene:EG10483" CDS 2713375..2713725 /gene="hypA" /locus_tag="b2726" /gene_synonym="ECK2721" /gene_synonym="JW2696" /function="phenotype; Energy metabolism, carbon: Anaerobic respiration" /note="pleiotrophic effects on 3 hydrogenase isozymes; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="protein involved in nickel insertion into hydrogenases 3" /protein_id="AAC75768.1" /db_xref="GI:1789081" /db_xref="ASAP:ABE-0008958" /db_xref="UniProtKB/Swiss-Prot:P0A700" /db_xref="EcoGene:EG10483" /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL AFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA DDGLQIRRIEIDQE" gene 2713729..2714601 /gene="hypB" /locus_tag="b2727" /gene_synonym="ECK2722" /gene_synonym="hydB" /gene_synonym="hydE" /gene_synonym="JW2697" /db_xref="EcoGene:EG10484" CDS 2713729..2714601 /gene="hypB" /locus_tag="b2727" /gene_synonym="ECK2722" /gene_synonym="hydB" /gene_synonym="hydE" /gene_synonym="JW2697" /function="phenotype; Energy metabolism, carbon: Fermentation" /experiment="N-terminus verified by Edman degradation: PMID 8423137,9740056" /note="guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3; GO_process: GO:0006113 - fermentation; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="GTP hydrolase involved in nickel liganding into hydrogenases" /protein_id="AAC75769.1" /db_xref="GI:1789082" /db_xref="ASAP:ABE-0008960" /db_xref="UniProtKB/Swiss-Prot:P0AAN3" /db_xref="EcoGene:EG10484" /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG MDQWLNWLETQRCA" gene 2714592..2714864 /gene="hypC" /locus_tag="b2728" /gene_synonym="ECK2723" /gene_synonym="JW2698" /db_xref="EcoGene:EG10485" CDS 2714592..2714864 /gene="hypC" /locus_tag="b2728" /gene_synonym="ECK2723" /gene_synonym="JW2698" /function="phenotype; Energy metabolism, carbon: Anaerobic respiration" /note="pleiotrophic effects on 3 hydrogenase isozymes; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hydrogenase maturation protein" /protein_id="AAC75770.1" /db_xref="GI:1789083" /db_xref="ASAP:ABE-0008962" /db_xref="UniProtKB/Swiss-Prot:P0AAM3" /db_xref="EcoGene:EG10485" /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK" gene 2714864..2715985 /gene="hypD" /locus_tag="b2729" /gene_synonym="ECK2724" /gene_synonym="hydF" /gene_synonym="JW2699" /db_xref="EcoGene:EG10486" CDS 2714864..2715985 /gene="hypD" /locus_tag="b2729" /gene_synonym="ECK2724" /gene_synonym="hydF" /gene_synonym="JW2699" /function="phenotype; Energy metabolism, carbon: Anaerobic respiration" /note="pleiotrophic effects on 3 hydrogenase isozymes; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hydrogenase maturation protein" /protein_id="AAC75771.1" /db_xref="GI:1789084" /db_xref="ASAP:ABE-0008965" /db_xref="UniProtKB/Swiss-Prot:P24192" /db_xref="EcoGene:EG10486" /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF HRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA" gene 2715982..2716992 /gene="hypE" /locus_tag="b2730" /gene_synonym="ECK2725" /gene_synonym="hydB" /gene_synonym="JW2700" /db_xref="EcoGene:EG10487" CDS 2715982..2716992 /gene="hypE" /locus_tag="b2730" /gene_synonym="ECK2725" /gene_synonym="hydB" /gene_synonym="JW2700" /function="factor; Energy metabolism, carbon: Anaerobic respiration" /note="plays structural role in maturation of all 3 hydrogenases; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein" /protein_id="AAC75772.2" /db_xref="GI:226510967" /db_xref="ASAP:ABE-0008967" /db_xref="UniProtKB/Swiss-Prot:P24193" /db_xref="EcoGene:EG10487" /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE GLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWG AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA LRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLV IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR IC" gene 2717066..2719144 /gene="fhlA" /locus_tag="b2731" /gene_synonym="ECK2726" /gene_synonym="fhl" /gene_synonym="JW2701" /db_xref="EcoGene:EG10301" CDS 2717066..2719144 /gene="fhlA" /locus_tag="b2731" /gene_synonym="ECK2726" /gene_synonym="fhl" /gene_synonym="JW2701" /function="regulator; Energy metabolism, carbon: Fermentation" /note="formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006113 - fermentation; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="formate hydrogenlyase transcriptional activator" /protein_id="AAC75773.1" /db_xref="GI:1789087" /db_xref="ASAP:ABE-0008971" /db_xref="UniProtKB/Swiss-Prot:P19323" /db_xref="EcoGene:EG10301" /translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFC ETWPQLDAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIV SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL HERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL KQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI VLPEPETPPAATVVALEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMK RLGIDKSALI" repeat_region 2719154..2719177 /note="REP198 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2719181..2719534) /gene="ygbA" /locus_tag="b2732" /gene_synonym="ECK2727" /gene_synonym="JW2702" /db_xref="EcoGene:EG11287" CDS complement(2719181..2719534) /gene="ygbA" /locus_tag="b2732" /gene_synonym="ECK2727" /gene_synonym="JW2702" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75774.1" /db_xref="GI:1789088" /db_xref="ASAP:ABE-0008973" /db_xref="UniProtKB/Swiss-Prot:P25728" /db_xref="EcoGene:EG11287" /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP VPELPEKYRPKKPHE" gene 2719821..2722382 /gene="mutS" /locus_tag="b2733" /gene_synonym="ant" /gene_synonym="ECK2728" /gene_synonym="fdv" /gene_synonym="JW2703" /gene_synonym="plm" /db_xref="EcoGene:EG10625" CDS 2719821..2722382 /gene="mutS" /locus_tag="b2733" /gene_synonym="ant" /gene_synonym="ECK2728" /gene_synonym="fdv" /gene_synonym="JW2703" /gene_synonym="plm" /function="enzyme; DNA - replication, repair, restriction/modification" /note="methyl-directed mismatch repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="methyl-directed mismatch repair protein" /protein_id="AAC75775.1" /db_xref="GI:1789089" /db_xref="ASAP:ABE-0008977" /db_xref="UniProtKB/Swiss-Prot:P23909" /db_xref="EcoGene:EG10625" /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME GVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV" gene 2722488..2723144 /gene="pphB" /locus_tag="b2734" /gene_synonym="ECK2729" /gene_synonym="JW2704" /gene_synonym="prpB" /gene_synonym="ygbH" /db_xref="EcoGene:EG13102" CDS 2722488..2723144 /gene="pphB" /locus_tag="b2734" /gene_synonym="ECK2729" /gene_synonym="JW2704" /gene_synonym="prpB" /gene_synonym="ygbH" /EC_number="3.1.3.16" /function="enzyme; Not classified" /note="protein phosphatase 2; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="serine/threonine-specific protein phosphatase 2" /protein_id="AAC75776.1" /db_xref="GI:1789090" /db_xref="ASAP:ABE-0008980" /db_xref="UniProtKB/Swiss-Prot:P55799" /db_xref="EcoGene:EG13102" /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPKID LLISVGDNIDRGPESLDVLRLLNQPWFTSVKGNHEAMALEAFETGDGNMWLASGGDWF FDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYAIAHADYPGSEYLFGKEIAESELL WPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPNSGRLSFYKIK " gene complement(2723195..2723962) /gene="ygbI" /locus_tag="b2735" /gene_synonym="ECK2730" /gene_synonym="JW2705" /db_xref="EcoGene:EG13103" CDS complement(2723195..2723962) /gene="ygbI" /locus_tag="b2735" /gene_synonym="ECK2730" /gene_synonym="JW2705" /function="putative regulator; Not classified" /note="putative DEOR-type transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="DeoR family putative transcriptional regulator" /protein_id="AAC75777.2" /db_xref="GI:226510968" /db_xref="ASAP:ABE-0008982" /db_xref="UniProtKB/Swiss-Prot:P52598" /db_xref="EcoGene:EG13103" /translation="MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLE QQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGT TTLAIAQHLIHMESLTVVTNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATM LRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWL ALPLSEFDQIITDDGLPESASRALVKQDLSLLVAKNE" gene 2724158..2725066 /gene="ygbJ" /locus_tag="b2736" /gene_synonym="ECK2731" /gene_synonym="JW2706" /db_xref="EcoGene:EG13104" CDS 2724158..2725066 /gene="ygbJ" /locus_tag="b2736" /gene_synonym="ECK2731" /gene_synonym="JW2706" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="AAC75778.1" /db_xref="GI:1789092" /db_xref="ASAP:ABE-0008986" /db_xref="UniProtKB/Swiss-Prot:Q46888" /db_xref="EcoGene:EG13104" /translation="MKTGSEFHVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACAT LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST IASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAV AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS NAGYGKEDDSAVIKIFSGITLPGAKS" gene 2725063..2726229 /gene="ygbK" /locus_tag="b2737" /gene_synonym="ECK2732" /gene_synonym="JW2707" /db_xref="EcoGene:EG13105" CDS 2725063..2726229 /gene="ygbK" /locus_tag="b2737" /gene_synonym="ECK2732" /gene_synonym="JW2707" /codon_start=1 /transl_table=11 /product="FliA-regulated DUF1537 family protein" /protein_id="AAC75779.1" /db_xref="GI:1789093" /db_xref="ASAP:ABE-0008988" /db_xref="UniProtKB/Swiss-Prot:Q46889" /db_xref="EcoGene:EG13105" /translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL MDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA QSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL VTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA REVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG" gene 2726321..2726959 /gene="ygbL" /locus_tag="b2738" /gene_synonym="ECK2733" /gene_synonym="JW2708" /db_xref="EcoGene:EG13106" CDS 2726321..2726959 /gene="ygbL" /locus_tag="b2738" /gene_synonym="ECK2733" /gene_synonym="JW2708" /function="putative enzyme; Not classified" /note="putative epimerase/aldolase" /codon_start=1 /transl_table=11 /product="putative class II aldolase" /protein_id="AAC75780.1" /db_xref="GI:1789094" /db_xref="ASAP:ABE-0008994" /db_xref="UniProtKB/Swiss-Prot:Q46890" /db_xref="EcoGene:EG13106" /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST WSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS" gene 2726964..2727740 /gene="ygbM" /locus_tag="b2739" /gene_synonym="ECK2734" /gene_synonym="JW2709" /db_xref="EcoGene:EG13107" CDS 2726964..2727740 /gene="ygbM" /locus_tag="b2739" /gene_synonym="ECK2734" /gene_synonym="JW2709" /codon_start=1 /transl_table=11 /product="putative hydroxypyruvate isomerase" /protein_id="AAC75781.1" /db_xref="GI:1789095" /db_xref="ASAP:ABE-0008996" /db_xref="UniProtKB/Swiss-Prot:Q46891" /db_xref="EcoGene:EG13107" /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYNYSTLQ IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV HVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQ ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR" gene 2727829..2729193 /gene="ygbN" /locus_tag="b2740" /gene_synonym="ECK2735" /gene_synonym="JW2710" /db_xref="EcoGene:EG13108" CDS 2727829..2729193 /gene="ygbN" /locus_tag="b2740" /gene_synonym="ECK2735" /gene_synonym="JW2710" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC75782.1" /db_xref="GI:1789097" /db_xref="ASAP:ABE-0008999" /db_xref="UniProtKB/Swiss-Prot:Q46892" /db_xref="EcoGene:EG13108" /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI AALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP HPGPVAAAGLLHADIGWLTIIGIAISIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLA PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGS PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV WAVI" repeat_region 2729207..2729224 /note="REP199 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2729287..2730279) /gene="rpoS" /locus_tag="b2741" /gene_synonym="abrD" /gene_synonym="appR" /gene_synonym="csi2" /gene_synonym="dpeB" /gene_synonym="ECK2736" /gene_synonym="JW5437" /gene_synonym="katF" /gene_synonym="nur" /gene_synonym="otsX" /gene_synonym="sigS" /db_xref="EcoGene:EG10510" CDS complement(2729287..2730279) /gene="rpoS" /locus_tag="b2741" /gene_synonym="abrD" /gene_synonym="appR" /gene_synonym="csi2" /gene_synonym="dpeB" /gene_synonym="ECK2736" /gene_synonym="JW5437" /gene_synonym="katF" /gene_synonym="nur" /gene_synonym="otsX" /gene_synonym="sigS" /function="enzyme; Global regulatory functions" /note="RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma S (sigma 38) factor" /protein_id="AAC75783.1" /db_xref="GI:1789098" /db_xref="ASAP:ABE-0009001" /db_xref="UniProtKB/Swiss-Prot:P13445" /db_xref="EcoGene:EG10510" /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE" gene complement(2730342..2731481) /gene="nlpD" /locus_tag="b2742" /gene_synonym="ECK2737" /gene_synonym="JW2712" /db_xref="EcoGene:EG12111" CDS complement(2730342..2731481) /gene="nlpD" /locus_tag="b2742" /gene_synonym="ECK2737" /gene_synonym="JW2712" /function="enzyme; Murein sacculus, peptidoglycan; membrane; Macromolecule synthesis, modification: Lipoprotein" /note="lipoprotein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="activator of AmiC murein hydrolase activity, lipoprotein" /protein_id="AAC75784.1" /db_xref="GI:1789099" /db_xref="ASAP:ABE-0009004" /db_xref="UniProtKB/Swiss-Prot:P0ADA3" /db_xref="EcoGene:EG12111" /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP ANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENG RIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVG QTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSA NKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASE GGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLV REQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR" gene complement(2731621..2732247) /gene="pcm" /locus_tag="b2743" /gene_synonym="ECK2738" /gene_synonym="JW2713" /db_xref="EcoGene:EG10689" CDS complement(2731621..2732247) /gene="pcm" /locus_tag="b2743" /gene_synonym="ECK2738" /gene_synonym="JW2713" /EC_number="2.1.1.77" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="L-isoaspartate protein carboxylmethyltransferase type II" /protein_id="AAC75785.1" /db_xref="GI:1789100" /db_xref="ASAP:ABE-0009006" /db_xref="UniProtKB/Swiss-Prot:P0A7A5" /db_xref="EcoGene:EG10689" /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA" gene complement(2732241..2733002) /gene="umpG" /locus_tag="b2744" /gene_synonym="ECK2739" /gene_synonym="JW2714" /gene_synonym="surE" /gene_synonym="ygbC" /db_xref="EcoGene:EG11817" CDS complement(2732241..2733002) /gene="umpG" /locus_tag="b2744" /gene_synonym="ECK2739" /gene_synonym="JW2714" /gene_synonym="surE" /gene_synonym="ygbC" /function="phenotype; Not classified" /note="survival protein; GO_process: GO:0006950 - response to stress" /codon_start=1 /transl_table=11 /product="broad specificity 5'(3')-nucleotidase and polyphosphatase" /protein_id="AAC75786.1" /db_xref="GI:1789101" /db_xref="ASAP:ABE-0009008" /db_xref="UniProtKB/Swiss-Prot:P0A840" /db_xref="EcoGene:EG11817" /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW" gene complement(2732983..2734032) /gene="truD" /locus_tag="b2745" /gene_synonym="ECK2740" /gene_synonym="JW2715" /gene_synonym="ygbO" /db_xref="EcoGene:EG13109" CDS complement(2732983..2734032) /gene="truD" /locus_tag="b2745" /gene_synonym="ECK2740" /gene_synonym="JW2715" /gene_synonym="ygbO" /EC_number="4.2.1.70" /function="enzyme; tRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 12756329" /note="putative hydrogenase subunit" /codon_start=1 /transl_table=11 /product="tRNA(Glu) pseudouridine(13) synthase" /protein_id="AAC75787.1" /db_xref="GI:1789102" /db_xref="ASAP:ABE-0009011" /db_xref="UniProtKB/Swiss-Prot:Q57261" /db_xref="EcoGene:EG13109" /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF GAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ VVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQ AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV RELINTTGDYAHIAE" gene complement(2734029..2734508) /gene="ispF" /locus_tag="b2746" /gene_synonym="ECK2741" /gene_synonym="JW2716" /gene_synonym="ygbB" /db_xref="EcoGene:EG11816" CDS complement(2734029..2734508) /gene="ispF" /locus_tag="b2746" /gene_synonym="ECK2741" /gene_synonym="JW2716" /gene_synonym="ygbB" /EC_number="4.6.1.12" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /protein_id="AAC75788.1" /db_xref="GI:1789103" /db_xref="ASAP:ABE-0009013" /db_xref="UniProtKB/Swiss-Prot:P62617" /db_xref="EcoGene:EG11816" /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK" gene complement(2734508..2735218) /gene="ispD" /locus_tag="b2747" /gene_synonym="ECK2742" /gene_synonym="JW2717" /gene_synonym="ygbP" /db_xref="EcoGene:EG13110" CDS complement(2734508..2735218) /gene="ispD" /locus_tag="b2747" /gene_synonym="ECK2742" /gene_synonym="JW2717" /gene_synonym="ygbP" /EC_number="2.7.7.60" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="4-diphosphocytidyl-2C-methyl-D-erythritol synthase" /protein_id="AAC75789.1" /db_xref="GI:1789104" /db_xref="ASAP:ABE-0009017" /db_xref="UniProtKB/Swiss-Prot:Q46893" /db_xref="EcoGene:EG13110" /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE DLALAEFYLTRTIHQENT" gene complement(2735237..2735548) /gene="ftsB" /locus_tag="b2748" /gene_synonym="ECK2743" /gene_synonym="JW2718" /gene_synonym="ygbQ" /db_xref="EcoGene:EG13111" CDS complement(2735237..2735548) /gene="ftsB" /locus_tag="b2748" /gene_synonym="ECK2743" /gene_synonym="JW2718" /gene_synonym="ygbQ" /codon_start=1 /transl_table=11 /product="cell division protein" /protein_id="AAC75790.1" /db_xref="GI:1789105" /db_xref="ASAP:ABE-0009019" /db_xref="UniProtKB/Swiss-Prot:P0A6S5" /db_xref="EcoGene:EG13111" /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN R" gene complement(2735742..2736065) /gene="ygbE" /locus_tag="b2749" /gene_synonym="ECK2744" /gene_synonym="JW2719" /db_xref="EcoGene:EG12707" CDS complement(2735742..2736065) /gene="ygbE" /locus_tag="b2749" /gene_synonym="ECK2744" /gene_synonym="JW2719" /function="putative enzyme; Not classified" /note="putative cytochrome oxidase subunit" /codon_start=1 /transl_table=11 /product="DUF3561 family inner membrane protein" /protein_id="AAC75791.1" /db_xref="GI:1789106" /db_xref="ASAP:ABE-0009021" /db_xref="UniProtKB/Swiss-Prot:P46141" /db_xref="EcoGene:EG12707" /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF MWLLG" gene complement(2736115..2736720) /gene="cysC" /locus_tag="b2750" /gene_synonym="ECK2745" /gene_synonym="JW2720" /db_xref="EcoGene:EG10185" CDS complement(2736115..2736720) /gene="cysC" /locus_tag="b2750" /gene_synonym="ECK2745" /gene_synonym="JW2720" /EC_number="2.7.1.25" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /note="GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="adenosine 5'-phosphosulfate kinase" /protein_id="AAC75792.1" /db_xref="GI:1789107" /db_xref="ASAP:ABE-0009023" /db_xref="UniProtKB/Swiss-Prot:P0A6J1" /db_xref="EcoGene:EG10185" /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS" gene complement(2736720..2738147) /gene="cysN" /locus_tag="b2751" /gene_synonym="ECK2746" /gene_synonym="JW2721" /db_xref="EcoGene:EG10194" CDS complement(2736720..2738147) /gene="cysN" /locus_tag="b2751" /gene_synonym="ECK2746" /gene_synonym="JW2721" /EC_number="2.7.7.4" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /experiment="N-terminus verified by Edman degradation: PMID 1316900" /note="ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, subunit 1" /protein_id="AAC75793.1" /db_xref="GI:1789108" /db_xref="ASAP:ABE-0009026" /db_xref="UniProtKB/Swiss-Prot:P23845" /db_xref="EcoGene:EG10194" /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI KHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE SMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ RVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSA FELELNALVRRHFPHWGARDLLGDK" gene complement(2738149..2739057) /gene="cysD" /locus_tag="b2752" /gene_synonym="ECK2747" /gene_synonym="JW2722" /db_xref="EcoGene:EG10186" CDS complement(2738149..2739057) /gene="cysD" /locus_tag="b2752" /gene_synonym="ECK2747" /gene_synonym="JW2722" /EC_number="2.7.7.4" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /experiment="N-terminus verified by Edman degradation: PMID 1316900" /note="ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfate adenylyltransferase, subunit 2" /protein_id="AAC75794.1" /db_xref="GI:1789109" /db_xref="ASAP:ABE-0009029" /db_xref="UniProtKB/Swiss-Prot:P21156" /db_xref="EcoGene:EG10186" /translation="MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST TSERQGRVIDRDQAGSMELKKRQGYF" gene 2739309..2740346 /gene="iap" /locus_tag="b2753" /gene_synonym="ECK2748" /gene_synonym="JW2723" /db_xref="EcoGene:EG10488" CDS 2739309..2740346 /gene="iap" /locus_tag="b2753" /gene_synonym="ECK2748" /gene_synonym="JW2723" /EC_number="3.4.11.-" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="aminopeptidase in alkaline phosphatase isozyme conversion" /protein_id="AAC75795.1" /db_xref="GI:1789111" /db_xref="ASAP:ABE-0009033" /db_xref="UniProtKB/Swiss-Prot:P10423" /db_xref="EcoGene:EG10488" /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV EATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIM LPLVKELAKAS" gene complement(2741297..2741581) /gene="ygbF" /locus_tag="b2754" /gene_synonym="cas2" /gene_synonym="ECK2749" /gene_synonym="JW5438" /db_xref="EcoGene:EG12845" CDS complement(2741297..2741581) /gene="ygbF" /locus_tag="b2754" /gene_synonym="cas2" /gene_synonym="ECK2749" /gene_synonym="JW5438" /codon_start=1 /transl_table=11 /product="CRISPR adaptation ssRNA endonuclease" /protein_id="AAC75796.2" /db_xref="GI:87082153" /db_xref="ASAP:ABE-0009036" /db_xref="UniProtKB/Swiss-Prot:P45956" /db_xref="EcoGene:EG12845" /translation="MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIW EQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV" gene complement(2741583..2742500) /gene="ygbT" /locus_tag="b2755" /gene_synonym="cas1" /gene_synonym="ECK2750" /gene_synonym="JW2725" /db_xref="EcoGene:EG13114" CDS complement(2741583..2742500) /gene="ygbT" /locus_tag="b2755" /gene_synonym="cas1" /gene_synonym="ECK2750" /gene_synonym="JW2725" /codon_start=1 /transl_table=11 /product="multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme" /protein_id="AAC75797.1" /db_xref="GI:1789113" /db_xref="ASAP:ABE-0009038" /db_xref="UniProtKB/Swiss-Prot:Q46896" /db_xref="EcoGene:EG13114" /translation="MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHI PVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQ AKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTW NGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYD IADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGE IQPPAPPEDAQPVAIPLPVSLGDAGHRSS" gene complement(2742516..2743115) /gene="casE" /locus_tag="b2756" /gene_synonym="cas6e" /gene_synonym="cse3" /gene_synonym="ECK2751" /gene_synonym="JW2726" /gene_synonym="ygcH" /db_xref="EcoGene:EG13115" CDS complement(2742516..2743115) /gene="casE" /locus_tag="b2756" /gene_synonym="cas6e" /gene_synonym="cse3" /gene_synonym="ECK2751" /gene_synonym="JW2726" /gene_synonym="ygcH" /codon_start=1 /transl_table=11 /product="CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein" /protein_id="AAC75798.1" /db_xref="GI:1789114" /db_xref="ASAP:ABE-0009042" /db_xref="UniProtKB/Swiss-Prot:Q46897" /db_xref="EcoGene:EG13115" /translation="MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKR NTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKR LDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQT VCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL" gene complement(2743102..2743776) /gene="casD" /locus_tag="b2757" /gene_synonym="cas5" /gene_synonym="ECK2752" /gene_synonym="JW5844" /gene_synonym="ygcI" /db_xref="EcoGene:EG13116" CDS complement(2743102..2743776) /gene="casD" /locus_tag="b2757" /gene_synonym="cas5" /gene_synonym="ECK2752" /gene_synonym="JW5844" /gene_synonym="ygcI" /codon_start=1 /transl_table=11 /product="CRISP RNA (crRNA) containing Cascade antiviral complex protein" /protein_id="AAC75799.2" /db_xref="GI:87082154" /db_xref="ASAP:ABE-0009044" /db_xref="UniProtKB/Swiss-Prot:Q46898" /db_xref="EcoGene:EG13116" /translation="MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACL GIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHE TIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLG TCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKG GMDVSQ" gene complement(2743779..2744870) /gene="casC" /locus_tag="b2758" /gene_synonym="cas4" /gene_synonym="cas7" /gene_synonym="cse4" /gene_synonym="ECK2753" /gene_synonym="JW2728" /gene_synonym="ygcJ" /db_xref="EcoGene:EG13117" CDS complement(2743779..2744870) /gene="casC" /locus_tag="b2758" /gene_synonym="cas4" /gene_synonym="cas7" /gene_synonym="cse4" /gene_synonym="ECK2753" /gene_synonym="JW2728" /gene_synonym="ygcJ" /codon_start=1 /transl_table=11 /product="CRISP RNA (crRNA) containing Cascade antiviral complex protein" /protein_id="AAC75800.1" /db_xref="GI:1789116" /db_xref="ASAP:ABE-0009046" /db_xref="UniProtKB/Swiss-Prot:Q46899" /db_xref="EcoGene:EG13117" /translation="MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSL KRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDE AEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDI ALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQE FSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPA DMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSL SDVDPITAQVKQMPTLEQLKSWVRNNGEA" gene complement(2744883..2745365) /gene="casB" /locus_tag="b2759" /gene_synonym="cse2" /gene_synonym="ECK2754" /gene_synonym="JW2729" /gene_synonym="ygcK" /db_xref="EcoGene:EG13118" CDS complement(2744883..2745365) /gene="casB" /locus_tag="b2759" /gene_synonym="cse2" /gene_synonym="ECK2754" /gene_synonym="JW2729" /gene_synonym="ygcK" /codon_start=1 /transl_table=11 /product="CRISP RNA (crRNA) containing Cascade antiviral complex protein" /protein_id="AAC75801.1" /db_xref="GI:1789117" /db_xref="ASAP:ABE-0009048" /db_xref="UniProtKB/Swiss-Prot:P76632" /db_xref="EcoGene:EG13118" /translation="MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLV QPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRI FQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA " gene complement(2745358..2746866) /gene="casA" /locus_tag="b2760" /gene_synonym="cse1" /gene_synonym="ECK2755" /gene_synonym="JW2730" /gene_synonym="ygcL" /db_xref="EcoGene:EG13119" CDS complement(2745358..2746866) /gene="casA" /locus_tag="b2760" /gene_synonym="cse1" /gene_synonym="ECK2755" /gene_synonym="JW2730" /gene_synonym="ygcL" /codon_start=1 /transl_table=11 /product="CRISP RNA (crRNA) containing Cascade antiviral complex protein" /protein_id="AAC75802.1" /db_xref="GI:1789118" /db_xref="ASAP:ABE-0009050" /db_xref="UniProtKB/Swiss-Prot:Q46901" /db_xref="EcoGene:EG13119" /translation="MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDME LAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQ TKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGG GFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSN ESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGL WPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQF RNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTAL RKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADL RDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG" gene complement(2747281..2749947) /gene="ygcB" /locus_tag="b2761" /gene_synonym="cas3" /gene_synonym="ECK2756" /gene_synonym="JW2731" /db_xref="EcoGene:EG12634" CDS complement(2747281..2749947) /gene="ygcB" /locus_tag="b2761" /gene_synonym="cas3" /gene_synonym="ECK2756" /gene_synonym="JW2731" /codon_start=1 /transl_table=11 /product="Cascade complex anti-viral R-loop helicase-annealase Cas3" /protein_id="AAC75803.1" /db_xref="GI:1789119" /db_xref="ASAP:ABE-0009054" /db_xref="UniProtKB/Swiss-Prot:P38036" /db_xref="EcoGene:EG12634" /translation="MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQ SVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLN GPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHH GFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCS SLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSN KRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQ QIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAIT EQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLI VDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENN SAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANA GAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNG KRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPV ATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEM DEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLP YVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGK QNLDGWVWQGNSIVITYTGDEGMTRVIPANPK" gene 2750082..2750137 /gene="sokX" /locus_tag="b4701" /gene_synonym="ECK4514" /db_xref="EcoGene:EG31187" ncRNA 2750082..2750137 /ncRNA_class="antisense_RNA" /gene="sokX" /locus_tag="b4701" /gene_synonym="ECK4514" /product="sok-related sRNA, function unknown" /db_xref="EcoGene:EG31187" gene complement(2750306..2751040) /gene="cysH" /locus_tag="b2762" /gene_synonym="ECK2757" /gene_synonym="JW2732" /db_xref="EcoGene:EG10189" CDS complement(2750306..2751040) /gene="cysH" /locus_tag="b2762" /gene_synonym="ECK2757" /gene_synonym="JW2732" /EC_number="1.8.4.8" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /note="GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent" /protein_id="AAC75804.1" /db_xref="GI:1789121" /db_xref="ASAP:ABE-0009057" /db_xref="UniProtKB/Swiss-Prot:P17854" /db_xref="EcoGene:EG10189" /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT RKWEPGMAEEETRFFGLKRECGLHEG" repeat_region 2751062..2751098 /note="REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2751115..2752827) /gene="cysI" /locus_tag="b2763" /gene_synonym="ECK2758" /gene_synonym="JW2733" /db_xref="EcoGene:EG10190" CDS complement(2751115..2752827) /gene="cysI" /locus_tag="b2763" /gene_synonym="ECK2758" /gene_synonym="JW2733" /EC_number="1.8.1.2" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /note="sulfite reductase, alpha subunit; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfite reductase, beta subunit, NAD(P)-binding, heme-binding" /protein_id="AAC75805.1" /db_xref="GI:1789122" /db_xref="ASAP:ABE-0009061" /db_xref="UniProtKB/Swiss-Prot:P17846" /db_xref="EcoGene:EG10190" /translation="MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGF KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRI TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR DLWD" gene complement(2752827..2754626) /gene="cysJ" /locus_tag="b2764" /gene_synonym="ECK2759" /gene_synonym="JW2734" /db_xref="EcoGene:EG10191" CDS complement(2752827..2754626) /gene="cysJ" /locus_tag="b2764" /gene_synonym="ECK2759" /gene_synonym="JW2734" /EC_number="1.5.1.30" /EC_number="1.5.1.38" /EC_number="1.8.1.2" /function="enzyme; Central intermediary metabolism: Sulfur metabolism" /note="sulfite reductase (NADPH), flavoprotein beta subunit; GO_process: GO:0006790 - sulfur metabolic process" /codon_start=1 /transl_table=11 /product="sulfite reductase, alpha subunit, flavoprotein" /protein_id="AAC75806.1" /db_xref="GI:1789123" /db_xref="ASAP:ABE-0009063" /db_xref="UniProtKB/Swiss-Prot:P38038" /db_xref="EcoGene:EG10191" /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGMRYQPGDAL GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY" gene 2754942..2755307 /gene="queD" /locus_tag="b2765" /gene_synonym="ECK2760" /gene_synonym="JW2735" /gene_synonym="sscR" /gene_synonym="ygcM" /db_xref="EcoGene:EG13120" CDS 2754942..2755307 /gene="queD" /locus_tag="b2765" /gene_synonym="ECK2760" /gene_synonym="JW2735" /gene_synonym="sscR" /gene_synonym="ygcM" /function="putative enzyme; Not classified" /note="putative 6-pyruvoyl tetrahydrobiopterin synthase" /codon_start=1 /transl_table=11 /product="6-pyruvoyl tetrahydrobiopterin synthase (PTPS)" /protein_id="AAC75807.1" /db_xref="GI:1789124" /db_xref="ASAP:ABE-0009068" /db_xref="UniProtKB/Swiss-Prot:P65870" /db_xref="EcoGene:EG13120" /translation="MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGE VDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPL LSAVMVKETCTAGCIYRGE" gene 2755385..2756656 /gene="ygcN" /locus_tag="b2766" /gene_synonym="ECK2761" /gene_synonym="JW2736" /db_xref="EcoGene:EG13121" CDS 2755385..2756656 /gene="ygcN" /locus_tag="b2766" /gene_synonym="ECK2761" /gene_synonym="JW2736" /function="putative enzyme; Not classified" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC75808.2" /db_xref="GI:87082155" /db_xref="ASAP:ABE-0009070" /db_xref="UniProtKB/Swiss-Prot:Q46904" /db_xref="EcoGene:EG13121" /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGA FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP EGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHRE PQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKP VPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL" gene 2756647..2756907 /gene="ygcO" /locus_tag="b2767" /gene_synonym="ECK2762" /gene_synonym="JW2737" /db_xref="EcoGene:EG13122" CDS 2756647..2756907 /gene="ygcO" /locus_tag="b2767" /gene_synonym="ECK2762" /gene_synonym="JW2737" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S cluster-containing protein" /protein_id="AAC75809.2" /db_xref="GI:87082156" /db_xref="ASAP:ABE-0009072" /db_xref="UniProtKB/Swiss-Prot:Q46905" /db_xref="EcoGene:EG13122" /translation="MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPE GNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG" gene 2756924..2757499 /gene="ygcP" /locus_tag="b2768" /gene_synonym="ECK2763" /gene_synonym="JW2738" /db_xref="EcoGene:EG13123" CDS 2756924..2757499 /gene="ygcP" /locus_tag="b2768" /gene_synonym="ECK2763" /gene_synonym="JW2738" /function="putative regulator; Not classified" /note="putative anti-terminator regulatory protein" /codon_start=1 /transl_table=11 /product="putative antiterminator regulatory protein" /protein_id="AAC75810.1" /db_xref="GI:1789127" /db_xref="ASAP:ABE-0009074" /db_xref="UniProtKB/Swiss-Prot:Q46906" /db_xref="EcoGene:EG13123" /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC DEEDARNAINAGVVALSTTNTGVWTLAKKLL" repeat_region 2757536..2757602 /note="REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2757647..2758507) /gene="ygcQ" /locus_tag="b2769" /gene_synonym="ECK2764" /gene_synonym="JW5440" /db_xref="EcoGene:EG13124" CDS complement(2757647..2758507) /gene="ygcQ" /locus_tag="b2769" /gene_synonym="ECK2764" /gene_synonym="JW5440" /function="putative enzyme; Not classified" /note="GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative flavoprotein" /protein_id="AAC75811.2" /db_xref="GI:87082157" /db_xref="ASAP:ABE-0009077" /db_xref="UniProtKB/Swiss-Prot:Q46907" /db_xref="EcoGene:EG13124" /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNV TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA LVTNIHADCQ" gene complement(2758504..2759283) /gene="ygcR" /locus_tag="b2770" /gene_synonym="ECK2765" /gene_synonym="JW5441" /db_xref="EcoGene:EG13125" CDS complement(2758504..2759283) /gene="ygcR" /locus_tag="b2770" /gene_synonym="ECK2765" /gene_synonym="JW5441" /function="putative transport; Not classified" /note="putative transport protein; GO_function: GO:0009055 - electron carrier activity" /codon_start=1 /transl_table=11 /product="putative flavoprotein" /protein_id="AAC75812.2" /db_xref="GI:87082158" /db_xref="ASAP:ABE-0009079" /db_xref="UniProtKB/Swiss-Prot:Q46908" /db_xref="EcoGene:EG13125" /translation="MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADE QAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE FVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFI TLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPA MQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP" gene complement(2759261..2760598) /gene="ygcS" /locus_tag="b2771" /gene_synonym="ECK2766" /gene_synonym="JW5845" /db_xref="EcoGene:EG13126" CDS complement(2759261..2760598) /gene="ygcS" /locus_tag="b2771" /gene_synonym="ECK2766" /gene_synonym="JW5845" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative MFS sugar transporter; membrane protein" /protein_id="AAC75813.2" /db_xref="GI:87082159" /db_xref="ASAP:ABE-0009082" /db_xref="UniProtKB/Swiss-Prot:Q46909" /db_xref="EcoGene:EG13126" /translation="MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQ LTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQF FATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLAS IAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRY FGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQT IGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGS SLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPW VLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV" gene complement(2760692..2762146) /gene="ygcU" /locus_tag="b4463" /gene_synonym="ECK2767" /gene_synonym="JW5442" /gene_synonym="ygcT" /gene_synonym="ygcV" /db_xref="EcoGene:EG13128" CDS complement(2760692..2762146) /gene="ygcU" /locus_tag="b4463" /gene_synonym="ECK2767" /gene_synonym="JW5442" /gene_synonym="ygcT" /gene_synonym="ygcV" /codon_start=1 /transl_table=11 /product="putative FAD-linked oxidoreductase" /protein_id="AAT48151.1" /db_xref="GI:48994907" /db_xref="ASAP:ABE-0174094" /db_xref="UniProtKB/Swiss-Prot:Q46911" /db_xref="EcoGene:EG13128" /translation="MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHG IYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDG SAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRS IGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITE VTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHF ADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVA AERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQ NGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWS KLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK" gene complement(2762216..2763001) /gene="ygcW" /locus_tag="b2774" /gene_synonym="ECK2768" /gene_synonym="JW5443" /db_xref="EcoGene:EG13130" CDS complement(2762216..2763001) /gene="ygcW" /locus_tag="b2774" /gene_synonym="ECK2768" /gene_synonym="JW5443" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative SDR family oxidoreductase" /protein_id="AAC75816.2" /db_xref="GI:87082160" /db_xref="ASAP:ABE-0009088" /db_xref="UniProtKB/Swiss-Prot:P76633" /db_xref="EcoGene:EG13130" /translation="MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGAN IFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNA GICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGG QWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVL DHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR" gene 2763320..2764597 /gene="yqcE" /locus_tag="b2775" /gene_synonym="ECK2769" /gene_synonym="JW2746" /gene_synonym="yqcF" /db_xref="EcoGene:EG13174" CDS 2763320..2764597 /gene="yqcE" /locus_tag="b2775" /gene_synonym="ECK2769" /gene_synonym="JW2746" /gene_synonym="yqcF" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative MFS transporter, inner membrane protein" /protein_id="AAC75817.1" /db_xref="GI:2367161" /db_xref="ASAP:ABE-0009095" /db_xref="UniProtKB/Swiss-Prot:P77031" /db_xref="EcoGene:EG13174" /translation="MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSN TEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVML CIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFS RFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVL RISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPL GGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYAS RGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWL MGMAALGMVIVFTFLLFQKIRTADSAPAMASSK" gene 2764624..2766102 /gene="ygcE" /locus_tag="b2776" /gene_synonym="ECK2770" /gene_synonym="JW5444" /db_xref="EcoGene:EG13033" CDS 2764624..2766102 /gene="ygcE" /locus_tag="b2776" /gene_synonym="ECK2770" /gene_synonym="JW5444" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative kinase" /protein_id="AAC75818.1" /db_xref="GI:1789138" /db_xref="ASAP:ABE-0009097" /db_xref="UniProtKB/Swiss-Prot:P55138" /db_xref="EcoGene:EG13033" /translation="MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDAD TAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLIS WQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED AAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAG LLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSW LRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMI GFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFA DVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRY DAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA" gene complement(2767475..2768146) /gene="queE" /locus_tag="b2777" /gene_synonym="ECK2771" /gene_synonym="JW2748" /gene_synonym="ygcF" /db_xref="EcoGene:EG13034" CDS complement(2767475..2768146) /gene="queE" /locus_tag="b2777" /gene_synonym="ECK2771" /gene_synonym="JW2748" /gene_synonym="ygcF" /function="enzyme; cofactor biosynthesis" /note="GO_process: GO:0046138 - coenzyme and prosthetic group biosynthetic process" /codon_start=1 /transl_table=11 /product="7-carboxy-7-deazaguanine synthase; queosine biosynthesis" /protein_id="AAC75819.1" /db_xref="GI:1789139" /db_xref="ASAP:ABE-0009101" /db_xref="UniProtKB/Swiss-Prot:P64554" /db_xref="EcoGene:EG13034" /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKH PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK YLNIA" gene 2768285..2768425 /gene="yqcG" /locus_tag="b4682" /gene_synonym="ECK4497" /db_xref="EcoGene:EG14487" CDS 2768285..2768425 /gene="yqcG" /locus_tag="b4682" /gene_synonym="ECK4497" /codon_start=1 /transl_table=11 /product="membrane stress resistance protein" /protein_id="ACO60004.1" /db_xref="GI:226510969" /db_xref="UniProtKB/Swiss-Prot:C1P612" /db_xref="EcoGene:EG14487" /translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFI QI" gene 2768439..2769311 /gene="ygcG" /locus_tag="b2778" /gene_synonym="ECK2772" /gene_synonym="JW5445" /db_xref="EcoGene:EG13035" CDS 2768439..2769311 /gene="ygcG" /locus_tag="b2778" /gene_synonym="ECK2772" /gene_synonym="JW5445" /codon_start=1 /transl_table=11 /product="TPM domain protein, putative phosphatase" /protein_id="AAC75820.2" /db_xref="GI:87082161" /db_xref="ASAP:ABE-0009108" /db_xref="UniProtKB/Swiss-Prot:P55140" /db_xref="EcoGene:EG13035" /translation="MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKEL THKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSD RTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQY PTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDL FLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSG GGGSSGGGGASGRW" gene complement(2769371..2770669) /gene="eno" /locus_tag="b2779" /gene_synonym="ECK2773" /gene_synonym="JW2750" /db_xref="EcoGene:EG10258" CDS complement(2769371..2770669) /gene="eno" /locus_tag="b2779" /gene_synonym="ECK2773" /gene_synonym="JW2750" /EC_number="4.2.1.11" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006096 - glycolysis; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="enolase" /protein_id="AAC75821.1" /db_xref="GI:1789141" /db_xref="ASAP:ABE-0009110" /db_xref="UniProtKB/Swiss-Prot:P0A6P9" /db_xref="EcoGene:EG10258" /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA" gene complement(2770757..2772394) /gene="pyrG" /locus_tag="b2780" /gene_synonym="ECK2774" /gene_synonym="JW2751" /db_xref="EcoGene:EG10810" CDS complement(2770757..2772394) /gene="pyrG" /locus_tag="b2780" /gene_synonym="ECK2774" /gene_synonym="JW2751" /EC_number="6.3.4.2" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="AAC75822.1" /db_xref="GI:1789142" /db_xref="ASAP:ABE-0009112" /db_xref="UniProtKB/Swiss-Prot:P0A7E5" /db_xref="EcoGene:EG10810" /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK" gene complement(2772622..2773413) /gene="mazG" /locus_tag="b2781" /gene_synonym="ECK2775" /gene_synonym="JW2752" /db_xref="EcoGene:EG10572" CDS complement(2772622..2773413) /gene="mazG" /locus_tag="b2781" /gene_synonym="ECK2775" /gene_synonym="JW2752" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase" /protein_id="AAC75823.1" /db_xref="GI:1789144" /db_xref="ASAP:ABE-0009117" /db_xref="UniProtKB/Swiss-Prot:P0AEY3" /db_xref="EcoGene:EG10572" /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL" gene complement(2773484..2773819) /gene="mazF" /locus_tag="b2782" /gene_synonym="chpA" /gene_synonym="chpAK" /gene_synonym="ECK2776" /gene_synonym="JW2753" /db_xref="EcoGene:EG11249" CDS complement(2773484..2773819) /gene="mazF" /locus_tag="b2782" /gene_synonym="chpA" /gene_synonym="chpAK" /gene_synonym="ECK2776" /gene_synonym="JW2753" /function="putative factor; Not classified" /note="probable growth inhibitor, PemK-like, autoregulated" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin, antitoxin is MazE" /protein_id="AAC75824.1" /db_xref="GI:1789145" /db_xref="ASAP:ABE-0009119" /db_xref="UniProtKB/Swiss-Prot:P0AE70" /db_xref="EcoGene:EG11249" /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLI KAKINVLIG" gene complement(2773819..2774067) /gene="mazE" /locus_tag="b2783" /gene_synonym="chpAI" /gene_synonym="chpR" /gene_synonym="ECK2777" /gene_synonym="JW2754" /gene_synonym="tasA" /db_xref="EcoGene:EG10571" CDS complement(2773819..2774067) /gene="mazE" /locus_tag="b2783" /gene_synonym="chpAI" /gene_synonym="chpR" /gene_synonym="ECK2777" /gene_synonym="JW2754" /gene_synonym="tasA" /function="phenotype; Not classified" /note="suppressor of inhibitory function of ChpA, PemI-like, autoregulated" /codon_start=1 /transl_table=11 /product="antitoxin of the ChpA-ChpR toxin-antitoxin system" /protein_id="AAC75825.1" /db_xref="GI:1789146" /db_xref="ASAP:ABE-0009122" /db_xref="UniProtKB/Swiss-Prot:P0AE72" /db_xref="EcoGene:EG10571" /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW" gene complement(2774145..2776379) /gene="relA" /locus_tag="b2784" /gene_synonym="ECK2778" /gene_synonym="JW2755" /gene_synonym="RC" /db_xref="EcoGene:EG10835" CDS complement(2774145..2776379) /gene="relA" /locus_tag="b2784" /gene_synonym="ECK2778" /gene_synonym="JW2755" /gene_synonym="RC" /EC_number="2.7.6.5" /function="enzyme; Global regulatory functions" /note="(p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="(p)ppGpp synthetase I/GTP pyrophosphokinase" /protein_id="AAC75826.1" /db_xref="GI:1789147" /db_xref="ASAP:ABE-0009125" /db_xref="UniProtKB/Swiss-Prot:P0AG20" /db_xref="EcoGene:EG10835" /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR LHGS" gene complement(2776427..2777728) /gene="rlmD" /locus_tag="b2785" /gene_synonym="ECK2779" /gene_synonym="JW2756" /gene_synonym="rumA" /gene_synonym="ygcA" /db_xref="EcoGene:EG11247" CDS complement(2776427..2777728) /gene="rlmD" /locus_tag="b2785" /gene_synonym="ECK2779" /gene_synonym="JW2756" /gene_synonym="rumA" /gene_synonym="ygcA" /EC_number="2.1.1.-" /function="enzyme; rRNA modification" /note="GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA m(5)U1939 methyltransferase, SAM-dependent" /protein_id="AAC75827.1" /db_xref="GI:1789148" /db_xref="ASAP:ABE-0009127" /db_xref="UniProtKB/Swiss-Prot:P55135" /db_xref="EcoGene:EG11247" /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR SKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK QCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA RALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK" gene 2777785..2780541 /gene="barA" /locus_tag="b2786" /gene_synonym="airS" /gene_synonym="ECK2780" /gene_synonym="gacC" /gene_synonym="JW2757" /db_xref="EcoGene:EG11367" CDS 2777785..2780541 /gene="barA" /locus_tag="b2786" /gene_synonym="airS" /gene_synonym="ECK2780" /gene_synonym="gacC" /gene_synonym="JW2757" /function="enzyme; Global regulatory functions" /note="sensor-regulator, activates OmpR by phophorylation; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="hybrid sensory histidine kinase, in two-component regulatory system with UvrY" /protein_id="AAC75828.1" /db_xref="GI:1789149" /db_xref="ASAP:ABE-0009131" /db_xref="UniProtKB/Swiss-Prot:P0AEC5" /db_xref="EcoGene:EG11367" /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS KILG" repeat_region 2780616..2780710 /note="RIP202 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2780773..2782113) /gene="gudD" /locus_tag="b2787" /gene_synonym="ECK2781" /gene_synonym="JW2758" /gene_synonym="ygcX" /db_xref="EcoGene:EG13167" CDS complement(2780773..2782113) /gene="gudD" /locus_tag="b2787" /gene_synonym="ECK2781" /gene_synonym="JW2758" /gene_synonym="ygcX" /EC_number="4.2.1.40" /note="(D)-glucarate dehydratase 1; (L)-idarate dehydratase; (L)-idarate epimerase; (D)-glucarate epimerase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="D-glucarate dehydratase 1" /protein_id="AAC75829.1" /db_xref="GI:1789150" /db_xref="ASAP:ABE-0009134" /db_xref="UniProtKB/Swiss-Prot:P0AES2" /db_xref="EcoGene:EG13167" /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIK DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKAT PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV PEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR" gene complement(2782134..2783474) /gene="gudX" /locus_tag="b2788" /gene_synonym="ECK2782" /gene_synonym="JW2759" /gene_synonym="ygcY" /db_xref="EcoGene:EG13168" CDS complement(2782134..2783474) /gene="gudX" /locus_tag="b2788" /gene_synonym="ECK2782" /gene_synonym="JW2759" /gene_synonym="ygcY" /function="putative enzyme; Not classified" /note="putative (D)-glucarate dehydratase 2; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glucarate dehydratase-related protein, substrate unknown" /protein_id="AAC75830.1" /db_xref="GI:1789151" /db_xref="ASAP:ABE-0009136" /db_xref="UniProtKB/Swiss-Prot:Q46915" /db_xref="EcoGene:EG13168" /translation="MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD NAGHTGIGEAPGGDVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA WTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTD LPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVP DAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH" gene complement(2783476..2784828) /gene="gudP" /locus_tag="b2789" /gene_synonym="ECK2783" /gene_synonym="JW2760" /gene_synonym="ygcZ" /db_xref="EcoGene:EG13169" CDS complement(2783476..2784828) /gene="gudP" /locus_tag="b2789" /gene_synonym="ECK2783" /gene_synonym="JW2760" /gene_synonym="ygcZ" /note="putative D-glucarate permease (MFS family); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative D-glucarate transporter" /protein_id="AAC75831.1" /db_xref="GI:1789152" /db_xref="ASAP:ABE-0009139" /db_xref="UniProtKB/Swiss-Prot:Q46916" /db_xref="EcoGene:EG13169" /translation="MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGS EMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQ GFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQY FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELEYI AAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFP VYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGM LLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMF GNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ " gene complement(2785263..2785712) /gene="yqcA" /locus_tag="b2790" /gene_synonym="ECK2784" /gene_synonym="JW2761" /db_xref="EcoGene:EG13170" CDS complement(2785263..2785712) /gene="yqcA" /locus_tag="b2790" /gene_synonym="ECK2784" /gene_synonym="JW2761" /codon_start=1 /transl_table=11 /product="short-chain flavodoxin, FMN-binding" /protein_id="AAC75832.1" /db_xref="GI:1789154" /db_xref="ASAP:ABE-0009142" /db_xref="UniProtKB/Swiss-Prot:P65367" /db_xref="EcoGene:EG13170" /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS" gene complement(2785730..2786512) /gene="truC" /locus_tag="b2791" /gene_synonym="ECK2785" /gene_synonym="JW2762" /gene_synonym="yqcB" /db_xref="EcoGene:EG13171" CDS complement(2785730..2786512) /gene="truC" /locus_tag="b2791" /gene_synonym="ECK2785" /gene_synonym="JW2762" /gene_synonym="yqcB" /EC_number="4.2.1.70" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA(Ile1,Asp) pseudouridine(65) synthase" /protein_id="AAC75833.1" /db_xref="GI:1789155" /db_xref="ASAP:ABE-0009147" /db_xref="UniProtKB/Swiss-Prot:P0AA41" /db_xref="EcoGene:EG13171" /translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS" gene complement(2786512..2786841) /gene="yqcC" /locus_tag="b2792" /gene_synonym="ECK2786" /gene_synonym="JW2763" /db_xref="EcoGene:EG13172" CDS complement(2786512..2786841) /gene="yqcC" /locus_tag="b2792" /gene_synonym="ECK2786" /gene_synonym="JW2763" /codon_start=1 /transl_table=11 /product="DUF446 family protein" /protein_id="AAC75834.1" /db_xref="GI:1789156" /db_xref="ASAP:ABE-0009152" /db_xref="UniProtKB/Swiss-Prot:Q46919" /db_xref="EcoGene:EG13172" /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT MEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDA LFADDAS" gene complement(2786884..2787252) /gene="csrB" /locus_tag="b4408" /gene_synonym="ECK2787" /gene_synonym="JWR0062" /db_xref="EcoGene:EG31119" ncRNA complement(2786884..2787252) /ncRNA_class="other" /gene="csrB" /locus_tag="b4408" /gene_synonym="ECK2787" /gene_synonym="JWR0062" /product="CsrA-binding sRNA, antagonizing CsrA regulation" /note="CsrB regulatory RNA; binds global regulatory protein CsrA, antagonizing CsrA regulation, blocking the CsrA binding of glgC mRNA" /db_xref="ASAP:ABE-0047213" /db_xref="EcoGene:EG31119" gene complement(2787463..2788008) /gene="syd" /locus_tag="b2793" /gene_synonym="ECK2788" /gene_synonym="JW2764" /gene_synonym="ydr" /db_xref="EcoGene:EG12959" CDS complement(2787463..2788008) /gene="syd" /locus_tag="b2793" /gene_synonym="ECK2788" /gene_synonym="JW2764" /gene_synonym="ydr" /experiment="N-terminus verified by Edman degradation: PMID 7890670" /note="interacts with secY; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="SecY-interacting protein" /protein_id="AAC75835.1" /db_xref="GI:1789157" /db_xref="ASAP:ABE-0009154" /db_xref="UniProtKB/Swiss-Prot:P0A8U0" /db_xref="EcoGene:EG12959" /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT RKRTHLASNLAEFLNQLKPLL" gene 2788076..2788924 /gene="queF" /locus_tag="b2794" /gene_synonym="ECK2789" /gene_synonym="JW2765" /gene_synonym="yqcD" /db_xref="EcoGene:EG13173" CDS 2788076..2788924 /gene="queF" /locus_tag="b2794" /gene_synonym="ECK2789" /gene_synonym="JW2765" /gene_synonym="yqcD" /EC_number="1.7.1.-" /function="enzyme; Queuosine biosynthesis" /codon_start=1 /transl_table=11 /product="7-cyano-7-deazaguanine reductase (NADPH-dependent)" /protein_id="AAC75836.1" /db_xref="GI:1789158" /db_xref="ASAP:ABE-0009162" /db_xref="UniProtKB/Swiss-Prot:Q46920" /db_xref="EcoGene:EG13173" /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSLQIQYRGRQIDREKLLRY LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST TRLVRQ" gene 2789036..2790400 /gene="ygdH" /locus_tag="b2795" /gene_synonym="ECK2790" /gene_synonym="JW2766" /db_xref="EcoGene:EG12373" CDS 2789036..2790400 /gene="ygdH" /locus_tag="b2795" /gene_synonym="ECK2790" /gene_synonym="JW2766" /codon_start=1 /transl_table=11 /product="UPF0717 family protein" /protein_id="AAC75837.1" /db_xref="GI:1789159" /db_xref="ASAP:ABE-0009166" /db_xref="UniProtKB/Swiss-Prot:P0ADR8" /db_xref="EcoGene:EG12373" /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY EICT" gene 2790957..2792246 /gene="sdaC" /locus_tag="b2796" /gene_synonym="dcrA" /gene_synonym="ECK2791" /gene_synonym="JW2767" /db_xref="EcoGene:EG12142" CDS 2790957..2792246 /gene="sdaC" /locus_tag="b2796" /gene_synonym="dcrA" /gene_synonym="ECK2791" /gene_synonym="JW2767" /function="putative transport; Transport of small molecules: Amino acids, amines" /note="probable serine transporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006564 - L-serine biosynthetic process" /codon_start=1 /transl_table=11 /product="putative serine transporter" /protein_id="AAC75838.1" /db_xref="GI:1789160" /db_xref="ASAP:ABE-0009169" /db_xref="UniProtKB/Swiss-Prot:P0AAD6" /db_xref="EcoGene:EG12142" /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS" gene 2792304..2793671 /gene="sdaB" /locus_tag="b2797" /gene_synonym="ECK2792" /gene_synonym="JW2768" /db_xref="EcoGene:EG11623" CDS 2792304..2793671 /gene="sdaB" /locus_tag="b2797" /gene_synonym="ECK2792" /gene_synonym="JW2768" /EC_number="4.3.1.17" /function="enzyme; Degradation of small molecules: Amino acids" /note="L-serine dehydratase (deaminase), L-SD2; GO_process: GO:0019395 - fatty acid oxidation; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="L-serine dehydratase 2" /protein_id="AAC75839.1" /db_xref="GI:1789161" /db_xref="ASAP:ABE-0009172" /db_xref="UniProtKB/Swiss-Prot:P30744" /db_xref="EcoGene:EG11623" /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPSFIQDVNTHGRLMLANGQ HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK IVACD" gene 2793783..2794538 /gene="ygdG" /locus_tag="b2798" /gene_synonym="ECK2793" /gene_synonym="exo" /gene_synonym="JW5446" /gene_synonym="xni" /db_xref="EcoGene:EG12372" CDS 2793783..2794538 /gene="ygdG" /locus_tag="b2798" /gene_synonym="ECK2793" /gene_synonym="exo" /gene_synonym="JW5446" /gene_synonym="xni" /EC_number="3.1.11.-" /note="5'-3' exonuclease; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="Ssb-binding protein, misidentified as ExoIX" /protein_id="AAC75840.2" /db_xref="GI:226510970" /db_xref="ASAP:ABE-0009174" /db_xref="UniProtKB/Swiss-Prot:P38506" /db_xref="EcoGene:EG12372" /translation="MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNE ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR" repeat_region 2794545..2794574 /note="REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2794593..2795741) /gene="fucO" /locus_tag="b2799" /gene_synonym="ECK2794" /gene_synonym="JW2770" /db_xref="EcoGene:EG10351" CDS complement(2794593..2795741) /gene="fucO" /locus_tag="b2799" /gene_synonym="ECK2794" /gene_synonym="JW2770" /EC_number="1.1.1.77" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="L-1,2-propanediol oxidoreductase" /protein_id="AAC75841.2" /db_xref="GI:345297178" /db_xref="ASAP:ABE-0009177" /db_xref="UniProtKB/Swiss-Prot:P0A9S1" /db_xref="EcoGene:EG10351" /translation="MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQC GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDT CKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHI KAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH GVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVG IPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW" gene complement(2795769..2796416) /gene="fucA" /locus_tag="b2800" /gene_synonym="ECK2795" /gene_synonym="fucC" /gene_synonym="JW2771" /gene_synonym="prd" /db_xref="EcoGene:EG10348" CDS complement(2795769..2796416) /gene="fucA" /locus_tag="b2800" /gene_synonym="ECK2795" /gene_synonym="fucC" /gene_synonym="JW2771" /gene_synonym="prd" /EC_number="4.1.2.17" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-fuculose-1-phosphate aldolase" /protein_id="AAC75842.1" /db_xref="GI:1789164" /db_xref="ASAP:ABE-0009179" /db_xref="UniProtKB/Swiss-Prot:P0AB87" /db_xref="EcoGene:EG10348" /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG IPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS ILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE" gene 2796963..2798279 /gene="fucP" /locus_tag="b2801" /gene_synonym="ECK2796" /gene_synonym="JW2772" /db_xref="EcoGene:EG10352" CDS 2796963..2798279 /gene="fucP" /locus_tag="b2801" /gene_synonym="ECK2796" /gene_synonym="JW2772" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="fucose permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-fucose transporter" /protein_id="AAC75843.1" /db_xref="GI:1789166" /db_xref="ASAP:ABE-0009187" /db_xref="UniProtKB/Swiss-Prot:P11551" /db_xref="EcoGene:EG10352" /translation="MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNL NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT FNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAI VLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI AMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN" gene 2798312..2800087 /gene="fucI" /locus_tag="b2802" /gene_synonym="ECK2797" /gene_synonym="JW2773" /db_xref="EcoGene:EG10349" CDS 2798312..2800087 /gene="fucI" /locus_tag="b2802" /gene_synonym="ECK2797" /gene_synonym="JW2773" /EC_number="5.3.1.25" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8052131" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-fucose isomerase" /protein_id="AAC75844.1" /db_xref="GI:1789167" /db_xref="ASAP:ABE-0009189" /db_xref="UniProtKB/Swiss-Prot:P69922" /db_xref="EcoGene:EG10349" /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA WAAHGMDIEGQDYRACQNYGPLYKR" repeat_region 2800154..2800177 /note="REP204 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2800196..2801614 /gene="fucK" /locus_tag="b2803" /gene_synonym="ECK2798" /gene_synonym="JW2774" /db_xref="EcoGene:EG10350" CDS 2800196..2801614 /gene="fucK" /locus_tag="b2803" /gene_synonym="ECK2798" /gene_synonym="JW2774" /EC_number="2.7.1.51" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="L-fuculokinase" /protein_id="AAC75845.2" /db_xref="GI:669802029" /db_xref="ASAP:ABE-0009191" /db_xref="UniProtKB/Swiss-Prot:P11553" /db_xref="EcoGene:EG10350" /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW KCPRTAAVMDNIERLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFI SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGAEQNEPVLSSGTWEILMVRSAQVDT SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP GADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR AQIHYQYRYFYPQTEPEFIEEV" gene 2801616..2802038 /gene="fucU" /locus_tag="b2804" /gene_synonym="ECK2799" /gene_synonym="JW2775" /db_xref="EcoGene:EG10355" CDS 2801616..2802038 /gene="fucU" /locus_tag="b2804" /gene_synonym="ECK2799" /gene_synonym="JW2775" /function="phenotype; Degradation of small molecules: Carbon compounds" /note="protein of fucose operon" /codon_start=1 /transl_table=11 /product="L-fucose mutarotase" /protein_id="AAC75846.1" /db_xref="GI:1789169" /db_xref="ASAP:ABE-0009193" /db_xref="UniProtKB/Swiss-Prot:P0AEN8" /db_xref="EcoGene:EG10355" /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP" gene 2802096..2802827 /gene="fucR" /locus_tag="b2805" /gene_synonym="ECK2800" /gene_synonym="JW2776" /db_xref="EcoGene:EG10353" CDS 2802096..2802827 /gene="fucR" /locus_tag="b2805" /gene_synonym="ECK2800" /gene_synonym="JW2776" /function="regulator; Degradation of small molecules: Carbon compounds" /note="positive regulator of the fuc operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="l-fucose operon activator" /protein_id="AAC75847.1" /db_xref="GI:1789170" /db_xref="ASAP:ABE-0009195" /db_xref="UniProtKB/Swiss-Prot:P0ACK8" /db_xref="EcoGene:EG10353" /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS STCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQ LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA RIGHLDEVTHIISDERQVATSLVTA" gene complement(2802871..2803971) /gene="rlmM" /locus_tag="b2806" /gene_synonym="ECK2801" /gene_synonym="JW2777" /gene_synonym="ygdE" /db_xref="EcoGene:EG11794" CDS complement(2802871..2803971) /gene="rlmM" /locus_tag="b2806" /gene_synonym="ECK2801" /gene_synonym="JW2777" /gene_synonym="ygdE" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent" /protein_id="AAC75848.1" /db_xref="GI:1789171" /db_xref="ASAP:ABE-0009197" /db_xref="UniProtKB/Swiss-Prot:P0ADR6" /db_xref="EcoGene:EG11794" /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT GYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA QIQARQLYHDREEVTVHVRRIWAAVGGRRDER" gene complement(2803964..2804359) /gene="ygdD" /locus_tag="b2807" /gene_synonym="ECK2802" /gene_synonym="JW2778" /db_xref="EcoGene:EG11793" CDS complement(2803964..2804359) /gene="ygdD" /locus_tag="b2807" /gene_synonym="ECK2802" /gene_synonym="JW2778" /codon_start=1 /transl_table=11 /product="UPF0382 family inner membrane protein" /protein_id="AAC75849.1" /db_xref="GI:1789172" /db_xref="ASAP:ABE-0009199" /db_xref="UniProtKB/Swiss-Prot:P0ADR2" /db_xref="EcoGene:EG11793" /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT PVGGVSFLAGWALMLVGAIRLKRKGVSHE" gene complement(2804378..2805295) /gene="gcvA" /locus_tag="b2808" /gene_synonym="ECK2803" /gene_synonym="JW2779" /db_xref="EcoGene:EG11795" CDS complement(2804378..2805295) /gene="gcvA" /locus_tag="b2808" /gene_synonym="ECK2803" /gene_synonym="JW2779" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="positive regulator of gcv operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="glycine cleavage system transcriptional activator; autorepressor" /protein_id="AAC75850.1" /db_xref="GI:1789173" /db_xref="ASAP:ABE-0009202" /db_xref="UniProtKB/Swiss-Prot:P0A9F6" /db_xref="EcoGene:EG11795" /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA ELGKIAAFRQWILAKAAAEQEKFRFRYEQ" gene 2805424..2805629 /gene="gcvB" /locus_tag="b4443" /gene_synonym="ECK2804" /gene_synonym="IS145" /gene_synonym="JWR0247" /gene_synonym="psrA11" /db_xref="EcoGene:EG31129" ncRNA 2805424..2805629 /ncRNA_class="antisense_RNA" /gene="gcvB" /locus_tag="b4443" /gene_synonym="ECK2804" /gene_synonym="IS145" /gene_synonym="JWR0247" /gene_synonym="psrA11" /product="sRNA antisense regulator represses oppA, dppA, gltI and livJ expression, Hfq-dependent" /note="regulated by gcvA and gcvR" /function="represses oppA, dppA, gltI, and livJ expression; mechanism unknown" /db_xref="ASAP:ABE-0047263" /db_xref="EcoGene:EG31129" gene complement(2805646..2805873) /gene="ygdI" /locus_tag="b2809" /gene_synonym="ECK2805" /gene_synonym="JW5448" /db_xref="EcoGene:EG13081" CDS complement(2805646..2805873) /gene="ygdI" /locus_tag="b2809" /gene_synonym="ECK2805" /gene_synonym="JW5448" /codon_start=1 /transl_table=11 /product="DUF903 family verified lipoprotein" /protein_id="AAC75851.2" /db_xref="GI:87082162" /db_xref="ASAP:ABE-0009214" /db_xref="UniProtKB/Swiss-Prot:P65292" /db_xref="EcoGene:EG13081" /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD NDTGMISYKDANGNKQQINRTDVKEMVELDQ" gene 2806065..2807270 /gene="csdA" /locus_tag="b2810" /gene_synonym="ECK2806" /gene_synonym="JW2781" /gene_synonym="ygdJ" /db_xref="EcoGene:EG13082" CDS 2806065..2807270 /gene="csdA" /locus_tag="b2810" /gene_synonym="ECK2806" /gene_synonym="JW2781" /gene_synonym="ygdJ" /EC_number="4.4.1.-" /experiment="N-terminus verified by Edman degradation: PMID 9278392" /note="GO_process: GO:0006790 - sulfur metabolic process; GO_process: GO:0006520 - cellular amino acid metabolic process" /codon_start=1 /transl_table=11 /product="cysteine sulfinate desulfinase" /protein_id="AAC75852.1" /db_xref="GI:1789175" /db_xref="ASAP:ABE-0009218" /db_xref="UniProtKB/Swiss-Prot:Q46925" /db_xref="EcoGene:EG13082" /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATQQFYS LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR SRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNV AGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV DRALELLVD" gene 2807270..2807713 /gene="csdE" /locus_tag="b2811" /gene_synonym="ECK2807" /gene_synonym="JW2782" /gene_synonym="ygdK" /db_xref="EcoGene:EG13083" CDS 2807270..2807713 /gene="csdE" /locus_tag="b2811" /gene_synonym="ECK2807" /gene_synonym="JW2782" /gene_synonym="ygdK" /codon_start=1 /transl_table=11 /product="CsdA-binding activator; Fe-S protein" /protein_id="AAC75853.1" /db_xref="GI:1789176" /db_xref="ASAP:ABE-0009220" /db_xref="UniProtKB/Swiss-Prot:P0AGF2" /db_xref="EcoGene:EG13083" /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGK TAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAATKQV" repeat_region 2807722..2807755 /note="REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2807764..2808570) /gene="tcdA" /locus_tag="b2812" /gene_synonym="csdL" /gene_synonym="ECK2808" /gene_synonym="JW2783" /gene_synonym="ygdL" /db_xref="EcoGene:EG13084" CDS complement(2807764..2808570) /gene="tcdA" /locus_tag="b2812" /gene_synonym="csdL" /gene_synonym="ECK2808" /gene_synonym="JW2783" /gene_synonym="ygdL" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA" /protein_id="AAC75854.1" /db_xref="GI:1789177" /db_xref="ASAP:ABE-0009223" /db_xref="UniProtKB/Swiss-Prot:Q46927" /db_xref="EcoGene:EG13084" /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV TVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGT VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG" repeat_region 2808624..2808720 /note="RIP206 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2808809..2809906) /gene="mltA" /locus_tag="b2813" /gene_synonym="ECK2809" /gene_synonym="JW2784" /gene_synonym="mlt" /gene_synonym="ygdM" /db_xref="EcoGene:EG13085" CDS complement(2808809..2809906) /gene="mltA" /locus_tag="b2813" /gene_synonym="ECK2809" /gene_synonym="JW2784" /gene_synonym="mlt" /gene_synonym="ygdM" /EC_number="3.2.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase A" /protein_id="AAC75855.1" /db_xref="GI:1789179" /db_xref="ASAP:ABE-0009228" /db_xref="UniProtKB/Swiss-Prot:P0A935" /db_xref="EcoGene:EG13085" /translation="MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLV NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA LSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG" gene 2810115..2810191 /gene="metZ" /locus_tag="b2814" /gene_synonym="ECK2810" /gene_synonym="JWR0206" /gene_synonym="metZalpha" /db_xref="EcoGene:EG30062" tRNA 2810115..2810191 /gene="metZ" /locus_tag="b2814" /gene_synonym="ECK2810" /gene_synonym="JWR0206" /gene_synonym="metZalpha" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0009232" /db_xref="EcoGene:EG30062" gene 2810225..2810301 /gene="metW" /locus_tag="b2815" /gene_synonym="ECK2811" /gene_synonym="JWR0207" /db_xref="EcoGene:EG31117" tRNA 2810225..2810301 /gene="metW" /locus_tag="b2815" /gene_synonym="ECK2811" /gene_synonym="JWR0207" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0009234" /db_xref="EcoGene:EG31117" gene 2810335..2810411 /gene="metV" /locus_tag="b2816" /gene_synonym="ECK2812" /gene_synonym="JWR0208" /gene_synonym="metX" /gene_synonym="metZbeta" /db_xref="EcoGene:EG30060" tRNA 2810335..2810411 /gene="metV" /locus_tag="b2816" /gene_synonym="ECK2812" /gene_synonym="JWR0208" /gene_synonym="metX" /gene_synonym="metZbeta" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0009236" /db_xref="EcoGene:EG30060" gene complement(2810485..2811738) /gene="amiC" /locus_tag="b2817" /gene_synonym="ECK2813" /gene_synonym="JW5449" /gene_synonym="ygdN" /db_xref="EcoGene:EG13086" CDS complement(2810485..2811738) /gene="amiC" /locus_tag="b2817" /gene_synonym="ECK2813" /gene_synonym="JW5449" /gene_synonym="ygdN" /EC_number="3.5.1.28" /function="putative enzyme; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase" /protein_id="AAC75856.2" /db_xref="GI:87082163" /db_xref="ASAP:ABE-0009238" /db_xref="UniProtKB/Swiss-Prot:P63883" /db_xref="EcoGene:EG13086" /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ QEVAESILAGIKAYFADGATLARRG" gene 2811970..2813301 /gene="argA" /locus_tag="b2818" /gene_synonym="Arg1" /gene_synonym="Arg2" /gene_synonym="argB" /gene_synonym="ECK2814" /gene_synonym="JW2786" /db_xref="EcoGene:EG10063" CDS 2811970..2813301 /gene="argA" /locus_tag="b2818" /gene_synonym="Arg1" /gene_synonym="Arg2" /gene_synonym="argB" /gene_synonym="ECK2814" /gene_synonym="JW2786" /EC_number="2.3.1.1" /function="enzyme; Amino acid biosynthesis: Arginine" /note="N-acetylglutamate synthase; amino acid acetyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="amino acid N-acetyltransferase and inactive acetylglutamate kinase" /protein_id="AAC75857.1" /db_xref="GI:1789181" /db_xref="ASAP:ABE-0009245" /db_xref="UniProtKB/Swiss-Prot:P0A6C5" /db_xref="EcoGene:EG10063" /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG" repeat_region 2813341..2813354 /note="REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2813363..2815189) /gene="recD" /locus_tag="b2819" /gene_synonym="ECK2815" /gene_synonym="hopE" /gene_synonym="JW2787" /db_xref="EcoGene:EG10826" CDS complement(2813363..2815189) /gene="recD" /locus_tag="b2819" /gene_synonym="ECK2815" /gene_synonym="hopE" /gene_synonym="JW2787" /EC_number="3.1.11.5" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 1618858" /note="DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="exonuclease V (RecBCD complex), alpha chain" /protein_id="AAC75858.1" /db_xref="GI:1789182" /db_xref="ASAP:ABE-0009247" /db_xref="UniProtKB/Swiss-Prot:P04993" /db_xref="EcoGene:EG10826" /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE" gene complement(2815189..2818731) /gene="recB" /locus_tag="b2820" /gene_synonym="ECK2816" /gene_synonym="ior" /gene_synonym="JW2788" /gene_synonym="rorA" /db_xref="EcoGene:EG10824" CDS complement(2815189..2818731) /gene="recB" /locus_tag="b2820" /gene_synonym="ECK2816" /gene_synonym="ior" /gene_synonym="JW2788" /gene_synonym="rorA" /EC_number="3.1.11.5" /function="enzyme; Degradation of DNA" /note="DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="exonuclease V (RecBCD complex), beta subunit" /protein_id="AAC75859.1" /db_xref="GI:1789183" /db_xref="ASAP:ABE-0009249" /db_xref="UniProtKB/Swiss-Prot:P08394" /db_xref="EcoGene:EG10824" /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL ASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN ALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT IHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAED LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC IEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGH GIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW VREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEP LIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGV DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA" gene complement(2818724..2821612) /gene="ptrA" /locus_tag="b2821" /gene_synonym="ECK2817" /gene_synonym="JW2789" /gene_synonym="ptr" /db_xref="EcoGene:EG10786" CDS complement(2818724..2821612) /gene="ptrA" /locus_tag="b2821" /gene_synonym="ECK2817" /gene_synonym="JW2789" /gene_synonym="ptr" /EC_number="3.4.24.55" /function="enzyme; Degradation of proteins, peptides, glyco" /codon_start=1 /transl_table=11 /product="protease III" /protein_id="AAC75860.1" /db_xref="GI:2367164" /db_xref="ASAP:ABE-0009252" /db_xref="UniProtKB/Swiss-Prot:P05458" /db_xref="EcoGene:EG10786" /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT PQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIP DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQ VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVD KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQ AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE" gene complement(2821788..2825156) /gene="recC" /locus_tag="b2822" /gene_synonym="ECK2818" /gene_synonym="JW2790" /db_xref="EcoGene:EG10825" CDS complement(2821788..2825156) /gene="recC" /locus_tag="b2822" /gene_synonym="ECK2818" /gene_synonym="JW2790" /EC_number="3.1.11.5" /function="enzyme; Degradation of DNA" /experiment="N-terminus verified by Edman degradation: PMID 3520484" /note="DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; GO_process: GO:0006308 - DNA catabolic process; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="exonuclease V (RecBCD complex), gamma chain" /protein_id="AAC75861.1" /db_xref="GI:1789186" /db_xref="ASAP:ABE-0009255" /db_xref="UniProtKB/Swiss-Prot:P07648" /db_xref="EcoGene:EG10825" /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL LEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS" gene complement(2825169..2825492) /gene="ppdC" /locus_tag="b2823" /gene_synonym="ECK2819" /gene_synonym="JW2791" /gene_synonym="ygdA" /db_xref="EcoGene:EG11154" CDS complement(2825169..2825492) /gene="ppdC" /locus_tag="b2823" /gene_synonym="ECK2819" /gene_synonym="JW2791" /gene_synonym="ygdA" /function="putative structural component; Surface structures" /note="prepilin peptidase dependent protein C; GO_component: GO:0009289 - pilus; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="putative prepilin peptidase-dependent protein" /protein_id="AAC75862.1" /db_xref="GI:1789187" /db_xref="ASAP:ABE-0009257" /db_xref="UniProtKB/Swiss-Prot:P08372" /db_xref="EcoGene:EG11154" /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR NQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLH CPNRQ" gene complement(2825477..2825884) /gene="ygdB" /locus_tag="b2824" /gene_synonym="ECK2820" /gene_synonym="JW5450" /db_xref="EcoGene:EG11155" CDS complement(2825477..2825884) /gene="ygdB" /locus_tag="b2824" /gene_synonym="ECK2820" /gene_synonym="JW5450" /codon_start=1 /transl_table=11 /product="DUF2509 family protein" /protein_id="AAC75863.2" /db_xref="GI:87082164" /db_xref="ASAP:ABE-0009261" /db_xref="UniProtKB/Swiss-Prot:P08370" /db_xref="EcoGene:EG11155" /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS LRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL WRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP" gene complement(2825881..2826444) /gene="ppdB" /locus_tag="b2825" /gene_synonym="ECK2821" /gene_synonym="JW5451" /gene_synonym="ygdC" /db_xref="EcoGene:EG11156" CDS complement(2825881..2826444) /gene="ppdB" /locus_tag="b2825" /gene_synonym="ECK2821" /gene_synonym="JW5451" /gene_synonym="ygdC" /function="putative structural component; Surface structures" /note="prepilin peptidase dependent protein B; GO_component: GO:0009289 - pilus; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="putative prepilin peptidase-dependent protein" /protein_id="AAC75864.1" /db_xref="GI:1789189" /db_xref="ASAP:ABE-0009263" /db_xref="UniProtKB/Swiss-Prot:P08371" /db_xref="EcoGene:EG11156" /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREP VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL TVNMRAASKSEPQTVVNASYSVTGFNL" gene complement(2826435..2826905) /gene="ppdA" /locus_tag="b2826" /gene_synonym="ECK2822" /gene_synonym="JW2794" /db_xref="EcoGene:EG12081" CDS complement(2826435..2826905) /gene="ppdA" /locus_tag="b2826" /gene_synonym="ECK2822" /gene_synonym="JW2794" /function="putative structural component; Surface structures" /note="prepilin peptidase dependent protein A; GO_component: GO:0009289 - pilus; GO_process: GO:0009101 - glycoprotein biosynthetic process" /codon_start=1 /transl_table=11 /product="putative prepilin peptidase-dependent protein" /protein_id="AAC75865.1" /db_xref="GI:1789190" /db_xref="ASAP:ABE-0009266" /db_xref="UniProtKB/Swiss-Prot:P33554" /db_xref="EcoGene:EG12081" /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL" gene complement(2827089..2827883) /gene="thyA" /locus_tag="b2827" /gene_synonym="ECK2823" /gene_synonym="JW2795" /db_xref="EcoGene:EG11002" CDS complement(2827089..2827883) /gene="thyA" /locus_tag="b2827" /gene_synonym="ECK2823" /gene_synonym="JW2795" /EC_number="2.1.1.45" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /experiment="N-terminus verified by Edman degradation: PMID 6308660" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="thymidylate synthetase" /protein_id="AAC75866.1" /db_xref="GI:1789191" /db_xref="ASAP:ABE-0009268" /db_xref="UniProtKB/Swiss-Prot:P0A884" /db_xref="EcoGene:EG11002" /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI" gene complement(2827890..2828765) /gene="lgt" /locus_tag="b2828" /gene_synonym="ECK2824" /gene_synonym="JW2796" /gene_synonym="umpA" /db_xref="EcoGene:EG12128" CDS complement(2827890..2828765) /gene="lgt" /locus_tag="b2828" /gene_synonym="ECK2824" /gene_synonym="JW2796" /gene_synonym="umpA" /EC_number="2.4.99.-" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /note="phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="phosphatidylglycerol-prolipoprotein diacylglyceryl transferase" /protein_id="AAC75867.1" /db_xref="GI:1789192" /db_xref="ASAP:ABE-0009270" /db_xref="UniProtKB/Swiss-Prot:P60955" /db_xref="EcoGene:EG12128" /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI MMVWAYRRSPQQHVS" gene complement(2828916..2831162) /gene="ptsP" /locus_tag="b2829" /gene_synonym="ECK2825" /gene_synonym="JW2797" /gene_synonym="ygdF" /gene_synonym="ygdO" /db_xref="EcoGene:EG12188" CDS complement(2828916..2831162) /gene="ptsP" /locus_tag="b2829" /gene_synonym="ECK2825" /gene_synonym="JW2797" /gene_synonym="ygdF" /gene_synonym="ygdO" /EC_number="2.7.3.9" /function="enzyme; Transport of small molecules: Other" /note="PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins); GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="PEP-protein phosphotransferase enzyme I; GAF domain containing protein" /protein_id="AAC75868.1" /db_xref="GI:1789193" /db_xref="ASAP:ABE-0009274" /db_xref="UniProtKB/Swiss-Prot:P37177" /db_xref="EcoGene:EG12188" /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI GLGYRHLSMNGRSVARAKYLLRRIDYAEAENLAQRSLEAQLATEVRHQVAAFMERRGM GGLIRGGL" gene complement(2831175..2831705) /gene="rppH" /locus_tag="b2830" /gene_synonym="ECK2826" /gene_synonym="JW2798" /gene_synonym="nudH" /gene_synonym="ygdP" /db_xref="EcoGene:EG13091" CDS complement(2831175..2831705) /gene="rppH" /locus_tag="b2830" /gene_synonym="ECK2826" /gene_synonym="JW2798" /gene_synonym="nudH" /gene_synonym="ygdP" /EC_number="3.6.1.-" /function="putative factor; Not classified" /note="putative invasion protein" /codon_start=1 /transl_table=11 /product="RNA pyrophosphohydrolase" /protein_id="AAC75869.1" /db_xref="GI:1789194" /db_xref="ASAP:ABE-0009276" /db_xref="UniProtKB/Swiss-Prot:P0A776" /db_xref="EcoGene:EG13091" /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE NTPKPQNASAYRRKRG" gene 2832390..2833079 /gene="mutH" /locus_tag="b2831" /gene_synonym="ECK2827" /gene_synonym="JW2799" /gene_synonym="mutR" /gene_synonym="prv" /db_xref="EcoGene:EG10624" CDS 2832390..2833079 /gene="mutH" /locus_tag="b2831" /gene_synonym="ECK2827" /gene_synonym="JW2799" /gene_synonym="mutR" /gene_synonym="prv" /function="enzyme; DNA - replication, repair, restriction/modification" /note="methyl-directed mismatch repair; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="methyl-directed mismatch repair protein" /protein_id="AAC75870.1" /db_xref="GI:1789196" /db_xref="ASAP:ABE-0009287" /db_xref="UniProtKB/Swiss-Prot:P06722" /db_xref="EcoGene:EG10624" /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALVGLVTPENL KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEE LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT SALLARHFLIQ" gene 2833148..2833861 /gene="ygdQ" /locus_tag="b2832" /gene_synonym="ECK2828" /gene_synonym="JW2800" /db_xref="EcoGene:EG13092" CDS 2833148..2833861 /gene="ygdQ" /locus_tag="b2832" /gene_synonym="ECK2828" /gene_synonym="JW2800" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="UPF0053 family inner membrane protein" /protein_id="AAC75871.1" /db_xref="GI:1789197" /db_xref="ASAP:ABE-0009290" /db_xref="UniProtKB/Swiss-Prot:P67127" /db_xref="EcoGene:EG13092" /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM FFSIAVESLNLIRNKKNPL" gene 2833999..2834217 /gene="ygdR" /locus_tag="b2833" /gene_synonym="ECK2829" /gene_synonym="JW2801" /db_xref="EcoGene:EG13076" CDS 2833999..2834217 /gene="ygdR" /locus_tag="b2833" /gene_synonym="ECK2829" /gene_synonym="JW2801" /codon_start=1 /transl_table=11 /product="DUF903 family verified lipoprotein" /protein_id="AAC75872.1" /db_xref="GI:1789198" /db_xref="ASAP:ABE-0009293" /db_xref="UniProtKB/Swiss-Prot:P65294" /db_xref="EcoGene:EG13076" /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD DTGLVSYHDQQGNAMQINRDDVSQIIER" gene 2834325..2835365 /gene="tas" /locus_tag="b2834" /gene_synonym="ECK2830" /gene_synonym="JW2802" /gene_synonym="ygdS" /db_xref="EcoGene:EG13093" CDS 2834325..2835365 /gene="tas" /locus_tag="b2834" /gene_synonym="ECK2830" /gene_synonym="JW2802" /gene_synonym="ygdS" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative NADP(H)-dependent aldo-keto reductase" /protein_id="AAC75873.1" /db_xref="GI:1789199" /db_xref="ASAP:ABE-0009298" /db_xref="UniProtKB/Swiss-Prot:P0A9T4" /db_xref="EcoGene:EG13093" /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVG LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI EAVHQVYTYPAP" gene complement(2835397..2836590) /gene="lplT" /locus_tag="b2835" /gene_synonym="ECK2831" /gene_synonym="JW2803" /gene_synonym="ygeD" /db_xref="EcoGene:EG12455" CDS complement(2835397..2836590) /gene="lplT" /locus_tag="b2835" /gene_synonym="ECK2831" /gene_synonym="JW2803" /gene_synonym="ygeD" /function="orf; Drug/analog sensitivity" /note="putative resistance proteins; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="lysophospholipid transporter" /protein_id="AAC75874.1" /db_xref="GI:1789200" /db_xref="ASAP:ABE-0009300" /db_xref="UniProtKB/Swiss-Prot:P39196" /db_xref="EcoGene:EG12455" /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWI WQRRH" gene complement(2836583..2838742) /gene="aas" /locus_tag="b2836" /gene_synonym="ECK2832" /gene_synonym="JW2804" /db_xref="EcoGene:EG11679" CDS complement(2836583..2838742) /gene="aas" /locus_tag="b2836" /gene_synonym="ECK2832" /gene_synonym="JW2804" /EC_number="2.3.1.40" /EC_number="6.2.1.20" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase" /protein_id="AAC75875.1" /db_xref="GI:1789201" /db_xref="ASAP:ABE-0009302" /db_xref="UniProtKB/Swiss-Prot:P31119" /db_xref="EcoGene:EG11679" /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI TLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI ARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE" gene complement(2838830..2838917) /gene="omrA" /locus_tag="b4444" /gene_synonym="ECK2833" /gene_synonym="JWR0248" /gene_synonym="PAIR2a" /gene_synonym="psrA12" /gene_synonym="rygA" /gene_synonym="sraE" /gene_synonym="t59" /db_xref="EcoGene:EG31157" ncRNA complement(2838830..2838917) /ncRNA_class="antisense_RNA" /gene="omrA" /locus_tag="b4444" /gene_synonym="ECK2833" /gene_synonym="JWR0248" /gene_synonym="PAIR2a" /gene_synonym="psrA12" /gene_synonym="rygA" /gene_synonym="sraE" /gene_synonym="t59" /product="sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq-dependent" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047264" /db_xref="EcoGene:EG31157" gene complement(2839032..2839113) /gene="omrB" /locus_tag="b4445" /gene_synonym="ECK2834" /gene_synonym="JWR0249" /gene_synonym="PAIR2b" /gene_synonym="rygB" /gene_synonym="t59" /db_xref="EcoGene:EG31158" ncRNA complement(2839032..2839113) /ncRNA_class="antisense_RNA" /gene="omrB" /locus_tag="b4445" /gene_synonym="ECK2834" /gene_synonym="JWR0249" /gene_synonym="PAIR2b" /gene_synonym="rygB" /gene_synonym="t59" /product="sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq-dependent" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047265" /db_xref="EcoGene:EG31158" gene 2839327..2840358 /gene="galR" /locus_tag="b2837" /gene_synonym="ECK2835" /gene_synonym="JW2805" /db_xref="EcoGene:EG10364" CDS 2839327..2840358 /gene="galR" /locus_tag="b2837" /gene_synonym="ECK2835" /gene_synonym="JW2805" /function="regulator; Degradation of small molecules: Carbon compounds" /note="repressor of galETK operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="galactose-inducible d-galactose regulon transcriptional repressor; autorepressor" /protein_id="AAC75876.1" /db_xref="GI:1789202" /db_xref="ASAP:ABE-0009307" /db_xref="UniProtKB/Swiss-Prot:P03024" /db_xref="EcoGene:EG10364" /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS YHPNANARALAQQTTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL EASHHATSD" gene complement(2840365..2841627) /gene="lysA" /locus_tag="b2838" /gene_synonym="ECK2836" /gene_synonym="JW2806" /db_xref="EcoGene:EG10549" CDS complement(2840365..2841627) /gene="lysA" /locus_tag="b2838" /gene_synonym="ECK2836" /gene_synonym="JW2806" /EC_number="4.1.1.20" /function="enzyme; Amino acid biosynthesis: Lysine" /note="diaminopimelate decarboxylase; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="diaminopimelate decarboxylase, PLP-binding" /protein_id="AAC75877.1" /db_xref="GI:1789203" /db_xref="ASAP:ABE-0009309" /db_xref="UniProtKB/Swiss-Prot:P00861" /db_xref="EcoGene:EG10549" /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLL PEVLFDNGQARLIRRRQTIEELLALELL" gene 2841749..2842684 /gene="lysR" /locus_tag="b2839" /gene_synonym="ECK2837" /gene_synonym="JW2807" /db_xref="EcoGene:EG10551" CDS 2841749..2842684 /gene="lysR" /locus_tag="b2839" /gene_synonym="ECK2837" /gene_synonym="JW2807" /function="regulator; Amino acid biosynthesis: Lysine" /note="positive regulator for lys; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of lysA; autorepressor" /protein_id="AAC75878.1" /db_xref="GI:1789204" /db_xref="ASAP:ABE-0009313" /db_xref="UniProtKB/Swiss-Prot:P03030" /db_xref="EcoGene:EG10551" /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR RMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH RPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA" gene complement(2842671..2843363) /gene="ygeA" /locus_tag="b2840" /gene_synonym="ECK2838" /gene_synonym="JW2808" /db_xref="EcoGene:EG11157" CDS complement(2842671..2843363) /gene="ygeA" /locus_tag="b2840" /gene_synonym="ECK2838" /gene_synonym="JW2808" /function="putative transport; Drug/analog sensitivity" /note="putative resistance proteins; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="Asp/Glu_racemase family protein" /protein_id="AAC75879.1" /db_xref="GI:1789205" /db_xref="ASAP:ABE-0009315" /db_xref="UniProtKB/Swiss-Prot:P03813" /db_xref="EcoGene:EG11157" /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI IFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA IHAEDAVAFMLS" repeat_region 2843461..2843483 /note="REP208 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2843492..2844910) /gene="araE" /locus_tag="b2841" /gene_synonym="ECK2839" /gene_synonym="JW2809" /db_xref="EcoGene:EG10056" CDS complement(2843492..2844910) /gene="araE" /locus_tag="b2841" /gene_synonym="ECK2839" /gene_synonym="JW2809" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="low-affinity L-arabinose transport system proton symport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015524 - L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="arabinose transporter" /protein_id="AAC75880.1" /db_xref="GI:1789207" /db_xref="ASAP:ABE-0009319" /db_xref="UniProtKB/Swiss-Prot:P0AE24" /db_xref="EcoGene:EG10056" /translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA GALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC RDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK NVTLEHIERKLMAGEKLRNIGV" gene complement(2845225..2845986) /gene="kduD" /locus_tag="b2842" /gene_synonym="ECK2840" /gene_synonym="JW2810" /gene_synonym="ygeC" /gene_synonym="yqeD" /db_xref="EcoGene:EG12361" CDS complement(2845225..2845986) /gene="kduD" /locus_tag="b2842" /gene_synonym="ECK2840" /gene_synonym="JW2810" /gene_synonym="ygeC" /gene_synonym="yqeD" /EC_number="1.1.1.127" /EC_number="1.1.1.149" /function="enzyme; Degradation of small molecules: Carbon compounds" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; KDG oxidoreductase; 20-ketosteroid reductase" /protein_id="AAC75881.1" /db_xref="GI:1789208" /db_xref="ASAP:ABE-0009330" /db_xref="UniProtKB/Swiss-Prot:P37769" /db_xref="EcoGene:EG12361" /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE PTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDAL EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR" gene complement(2846016..2846852) /gene="kduI" /locus_tag="b2843" /gene_synonym="ECK2841" /gene_synonym="JW2811" /gene_synonym="yqeE" /db_xref="EcoGene:EG13096" CDS complement(2846016..2846852) /gene="kduI" /locus_tag="b2843" /gene_synonym="ECK2841" /gene_synonym="JW2811" /gene_synonym="yqeE" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 9761873" /note="homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="hexuronate isomerase" /protein_id="AAC75882.1" /db_xref="GI:1789209" /db_xref="ASAP:ABE-0009332" /db_xref="UniProtKB/Swiss-Prot:Q46938" /db_xref="EcoGene:EG13096" /translation="MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDR IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD ALYVGKGAKEVVFASIDTGTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD LR" gene complement(2847139..2848320) /gene="yqeF" /locus_tag="b2844" /gene_synonym="ECK2842" /gene_synonym="JW5453" /db_xref="EcoGene:EG13097" CDS complement(2847139..2848320) /gene="yqeF" /locus_tag="b2844" /gene_synonym="ECK2842" /gene_synonym="JW5453" /function="enzyme; Not classified" /note="putative acyltransferase" /codon_start=1 /transl_table=11 /product="short chain acyltransferase" /protein_id="AAC75883.2" /db_xref="GI:87082165" /db_xref="ASAP:ABE-0009335" /db_xref="UniProtKB/Swiss-Prot:Q46939" /db_xref="EcoGene:EG13097" /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQ PRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR AFASVGVDPALMGIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQALSVGKMLEWDE RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD E" gene 2848575..2849804 /gene="yqeG" /locus_tag="b2845" /gene_synonym="ECK2843" /gene_synonym="JW2813" /db_xref="EcoGene:EG13098" CDS 2848575..2849804 /gene="yqeG" /locus_tag="b2845" /gene_synonym="ECK2843" /gene_synonym="JW2813" /function="putative transport; Not classified" /note="putative transporter protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC75884.1" /db_xref="GI:1789211" /db_xref="ASAP:ABE-0009345" /db_xref="UniProtKB/Swiss-Prot:P63340" /db_xref="EcoGene:EG13098" /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL IYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL IAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDR REKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALS MLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRA LSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGN LITLIVGILCVSVMFFS" gene 2850264..2850896 /gene="yqeH" /locus_tag="b2846" /gene_synonym="ECK2844" /gene_synonym="JW5454" /db_xref="EcoGene:EG13099" CDS 2850264..2850896 /gene="yqeH" /locus_tag="b2846" /gene_synonym="ECK2844" /gene_synonym="JW5454" /codon_start=1 /transl_table=11 /product="putative LuxR family transcriptional regulator" /protein_id="AAC75885.2" /db_xref="GI:87082166" /db_xref="ASAP:ABE-0009349" /db_xref="UniProtKB/Swiss-Prot:Q46941" /db_xref="EcoGene:EG13099" /translation="MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEES SYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDR NMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIM GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH" gene 2851230..2852039 /gene="yqeI" /locus_tag="b2847" /gene_synonym="ECK2845" /gene_synonym="JW2815" /db_xref="EcoGene:EG13100" CDS 2851230..2852039 /gene="yqeI" /locus_tag="b2847" /gene_synonym="ECK2845" /gene_synonym="JW2815" /function="putative transport; Not classified" /note="putative sensory transducer" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="AAC75886.1" /db_xref="GI:1789213" /db_xref="ASAP:ABE-0009352" /db_xref="UniProtKB/Swiss-Prot:Q46942" /db_xref="EcoGene:EG13100" /translation="MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEA FPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFK IHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRIL DSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVANCLTLSYREVNRD" gene 2852032..2852514 /gene="yqeJ" /locus_tag="b2848" /gene_synonym="ECK2846" /gene_synonym="JW5455" /db_xref="EcoGene:EG13101" CDS 2852032..2852514 /gene="yqeJ" /locus_tag="b2848" /gene_synonym="ECK2846" /gene_synonym="JW5455" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75887.2" /db_xref="GI:87082167" /db_xref="ASAP:ABE-0009354" /db_xref="UniProtKB/Swiss-Prot:Q46943" /db_xref="EcoGene:EG13101" /translation="MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIF NDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTS KKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR " gene complement(2852547..2852627) /gene="yqeL" /locus_tag="b4683" /gene_synonym="ECK4498" /db_xref="EcoGene:EG14488" CDS complement(2852547..2852627) /gene="yqeL" /locus_tag="b4683" /gene_synonym="ECK4498" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO60005.1" /db_xref="GI:226510971" /db_xref="UniProtKB/Swiss-Prot:C1P613" /db_xref="EcoGene:EG14488" /translation="MKDVDQIFDALDCHILREYLILLFYD" gene complement(2852663..2853088) /gene="yqeK" /locus_tag="b2849" /gene_synonym="ECK2847" /gene_synonym="JW2817" /db_xref="EcoGene:EG13274" CDS complement(2852663..2853088) /gene="yqeK" /locus_tag="b2849" /gene_synonym="ECK2847" /gene_synonym="JW2817" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75888.2" /db_xref="GI:87082168" /db_xref="ASAP:ABE-0009356" /db_xref="UniProtKB/Swiss-Prot:P77136" /db_xref="EcoGene:EG13274" /translation="MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAENVLTQTT SWTLNSRYVNVNSVNKVNVKSKVKNSYISRSVNDEFSLTDDEINSFKETLVLSSIDSL SKLVLNNPLSVLFTSTVRRNNNRAKMNVEFDSWICTRCC" gene 2853282..2853771 /gene="ygeF" /locus_tag="b2850" /gene_synonym="ECK2848" /gene_synonym="JW2818" /pseudo /db_xref="EcoGene:EG13036" CDS join(2853282..2853677,2853676..2853771) /gene="ygeF" /locus_tag="b2850" /gene_synonym="ECK2848" /gene_synonym="JW2818" /note="pseudogene" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009361" /db_xref="UniProtKB/Swiss-Prot:Q46786" /db_xref="EcoGene:EG13036" gene 2853996..2854487 /gene="ygeG" /locus_tag="b2851" /gene_synonym="ECK2849" /gene_synonym="JW2819" /db_xref="EcoGene:EG13037" CDS 2853996..2854487 /gene="ygeG" /locus_tag="b2851" /gene_synonym="ECK2849" /gene_synonym="JW2819" /codon_start=1 /transl_table=11 /product="SycD-like chaperone family TPR-repeat-containing protein" /protein_id="AAC75890.1" /db_xref="GI:1789215" /db_xref="ASAP:ABE-0009364" /db_xref="UniProtKB/Swiss-Prot:Q46787" /db_xref="EcoGene:EG13037" /translation="MSTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIY AYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYN YFPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSE DNG" gene 2854822..2856198 /gene="ygeH" /locus_tag="b2852" /gene_synonym="ECK2850" /gene_synonym="JW2820" /db_xref="EcoGene:EG13038" CDS 2854822..2856198 /gene="ygeH" /locus_tag="b2852" /gene_synonym="ECK2850" /gene_synonym="JW2820" /function="putative factor; Not classified" /note="putative invasion protein" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="AAC75891.1" /db_xref="GI:1789216" /db_xref="ASAP:ABE-0009368" /db_xref="UniProtKB/Swiss-Prot:P76639" /db_xref="EcoGene:EG13038" /translation="MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLL ESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAA TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR ICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLK QLTRICMR" gene 2856366..2856584 /gene="ygeI" /locus_tag="b2853" /gene_synonym="ECK2851" /gene_synonym="JW5456" /db_xref="EcoGene:EG13039" CDS 2856366..2856584 /gene="ygeI" /locus_tag="b2853" /gene_synonym="ECK2851" /gene_synonym="JW5456" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75892.1" /db_xref="GI:1789217" /db_xref="ASAP:ABE-0009374" /db_xref="UniProtKB/Swiss-Prot:Q46789" /db_xref="EcoGene:EG13039" /translation="MTNPIGINNLSQSSNIANATGDEVVSLDKHINTSATDTDQIQAF IVSTWMAPFQNDMYSEDNPISPYYKIEW" gene 2856667..2857169 /gene="pbl" /locus_tag="b2854" /gene_synonym="ECK2852" /gene_synonym="JW5457" /gene_synonym="ygeJ" /pseudo /db_xref="EcoGene:EG13040" CDS join(2856667..2857110,2857110..2857169) /gene="pbl" /locus_tag="b2854" /gene_synonym="ECK2852" /gene_synonym="JW5457" /gene_synonym="ygeJ" /note="pseudogene, peptidoglycan-binding enzyme family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009377" /db_xref="UniProtKB/Swiss-Prot:Q46790" /db_xref="EcoGene:EG13040" gene complement(2857188..2857820) /gene="ygeK" /locus_tag="b2856" /gene_synonym="ECK2853" /gene_synonym="JW5458" /gene_synonym="ygeL" /pseudo /db_xref="EcoGene:EG13041" CDS complement(2857188..2857820) /gene="ygeK" /locus_tag="b2856" /gene_synonym="ECK2853" /gene_synonym="JW5458" /gene_synonym="ygeL" /note="pseudogene, response regulator family, part of T3SS PAI ETT2 remnant; putative 2-component transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009379" /db_xref="ASAP:ABE-0009381" /db_xref="UniProtKB/Swiss-Prot:Q46791" /db_xref="EcoGene:EG13041" gene complement(2858042..2858748) /gene="ygeN" /locus_tag="b2858" /gene_synonym="ECK2855" /gene_synonym="JW5459" /gene_synonym="ygeM" /pseudo /db_xref="EcoGene:EG13044" CDS complement(join(2858042..2858488,2858488..2858748)) /gene="ygeN" /locus_tag="b2858" /gene_synonym="ECK2855" /gene_synonym="JW5459" /gene_synonym="ygeM" /note="pseudogene, orgB family, part of T3SS PAI ETT2 remnant" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009385" /db_xref="ASAP:ABE-0009387" /db_xref="UniProtKB/Swiss-Prot:Q46793" /db_xref="EcoGene:EG13044" gene complement(2858690..2859088) /gene="ygeO" /locus_tag="b2859" /gene_synonym="ECK2857" /gene_synonym="JW5846" /pseudo /db_xref="EcoGene:EG13045" CDS complement(2858690..2859088) /gene="ygeO" /locus_tag="b2859" /gene_synonym="ECK2857" /gene_synonym="JW5846" /note="pseudogene, orgA family, part of T3SS PAI ETT2 remnant" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009390" /db_xref="UniProtKB/Swiss-Prot:Q46795" /db_xref="EcoGene:EG13045" mobile_element complement(2859089..2860419) /mobile_element_type="insertion sequence:IS2H" gene complement(2859100..2860005) /gene="insD1" /locus_tag="b2860" /gene_synonym="ECK0358" /db_xref="EcoGene:EG40004" CDS complement(2859100..2860005) /gene="insD1" /locus_tag="b2860" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="AAC75899.1" /db_xref="GI:1789224" /db_xref="ASAP:ABE-0009395" /db_xref="UniProtKB/Swiss-Prot:P0CF56" /db_xref="EcoGene:EG40004" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(2859963..2860328) /gene="insC1" /locus_tag="b2861" /gene_synonym="ECK0357" /db_xref="EcoGene:EG40003" CDS complement(2859963..2860328) /gene="insC1" /locus_tag="b2861" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="AAC75900.3" /db_xref="GI:145693177" /db_xref="ASAP:ABE-0009397" /db_xref="UniProtKB/Swiss-Prot:P0CF43" /db_xref="EcoGene:EG40003" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" gene complement(2860420..2861556) /gene="ygeQ" /locus_tag="b2863" /gene_synonym="ECK2858" /gene_synonym="JW2831" /gene_synonym="ygeP" /pseudo /db_xref="EcoGene:EG13047" CDS complement(2860420..2861556) /gene="ygeQ" /locus_tag="b2863" /gene_synonym="ECK2858" /gene_synonym="JW2831" /gene_synonym="ygeP" /note="pseudogene, glycosyl hydrolase family 15, part of T3SS PAI ETT2 remnant" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009399" /db_xref="ASAP:ABE-0009401" /db_xref="UniProtKB/Swiss-Prot:Q46797" /db_xref="EcoGene:EG13047" gene complement(2861712..2861785) /gene="glyU" /locus_tag="b2864" /gene_synonym="ECK2860" /gene_synonym="JWR0066" /gene_synonym="suA36" /gene_synonym="sufD" /gene_synonym="sumB" /gene_synonym="supT" /db_xref="EcoGene:EG30037" tRNA complement(2861712..2861785) /gene="glyU" /locus_tag="b2864" /gene_synonym="ECK2860" /gene_synonym="JWR0066" /gene_synonym="suA36" /gene_synonym="sufD" /gene_synonym="sumB" /gene_synonym="supT" /product="tRNA-Gly" /note="anticodon: CCC" /db_xref="ASAP:ABE-0009405" /db_xref="EcoGene:EG30037" gene complement(2861864..2862619) /gene="ygeR" /locus_tag="b2865" /gene_synonym="ECK2861" /gene_synonym="JW2833" /db_xref="EcoGene:EG13048" CDS complement(2861864..2862619) /gene="ygeR" /locus_tag="b2865" /gene_synonym="ECK2861" /gene_synonym="JW2833" /function="putative structure; Not classified" /note="putative lipoprotein; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="LysM domain-containing M23 family putative peptidase; septation lipoprotein" /protein_id="AAC75903.2" /db_xref="GI:87082174" /db_xref="ASAP:ABE-0009407" /db_xref="UniProtKB/Swiss-Prot:Q46798" /db_xref="EcoGene:EG13048" /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSITRKSTAKSTT KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGST DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC" gene 2863073..2865331 /gene="xdhA" /locus_tag="b2866" /gene_synonym="ECK2862" /gene_synonym="JW5462" /gene_synonym="ygeS" /db_xref="EcoGene:EG13049" CDS 2863073..2865331 /gene="xdhA" /locus_tag="b2866" /gene_synonym="ECK2862" /gene_synonym="JW5462" /gene_synonym="ygeS" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, molybdenum binding subunit" /protein_id="AAC75904.1" /db_xref="GI:1789230" /db_xref="ASAP:ABE-0009413" /db_xref="UniProtKB/Swiss-Prot:Q46799" /db_xref="EcoGene:EG13049" /translation="MRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSIND EQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAI VVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGNLLKQSTMSTGNVQ QTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQA LDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRT RHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAY SSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANP LTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGV EIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVT PFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERP EEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVTIN RILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPT MPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMATGVAINTLPLTPK RLYEEFHLAGLI" gene 2865342..2866220 /gene="xdhB" /locus_tag="b2867" /gene_synonym="ECK2863" /gene_synonym="JW2835" /gene_synonym="ygeT" /db_xref="EcoGene:EG13050" CDS 2865342..2866220 /gene="xdhB" /locus_tag="b2867" /gene_synonym="ECK2863" /gene_synonym="JW2835" /gene_synonym="ygeT" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, FAD-binding subunit" /protein_id="AAC75905.1" /db_xref="GI:1789231" /db_xref="ASAP:ABE-0009416" /db_xref="UniProtKB/Swiss-Prot:Q46800" /db_xref="EcoGene:EG13050" /translation="MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHND RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAG PQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMT KKVISEAVAAAGGKLQ" gene 2866217..2866696 /gene="xdhC" /locus_tag="b2868" /gene_synonym="ECK2864" /gene_synonym="JW2836" /gene_synonym="ygeU" /db_xref="EcoGene:EG13051" CDS 2866217..2866696 /gene="xdhC" /locus_tag="b2868" /gene_synonym="ECK2864" /gene_synonym="JW2836" /gene_synonym="ygeU" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, Fe-S binding subunit" /protein_id="AAC75906.1" /db_xref="GI:1789232" /db_xref="ASAP:ABE-0009418" /db_xref="UniProtKB/Swiss-Prot:Q46801" /db_xref="EcoGene:EG13051" /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK" gene complement(2866736..2868514) /gene="ygeV" /locus_tag="b2869" /gene_synonym="ECK2865" /gene_synonym="JW2837" /db_xref="EcoGene:EG13052" CDS complement(2866736..2868514) /gene="ygeV" /locus_tag="b2869" /gene_synonym="ECK2865" /gene_synonym="JW2837" /function="putative regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative sigma-54-interacting transcriptional activator" /protein_id="AAC75907.1" /db_xref="GI:1789233" /db_xref="ASAP:ABE-0009420" /db_xref="UniProtKB/Swiss-Prot:Q46802" /db_xref="EcoGene:EG13052" /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISK IFATMIDNMDQGVLVVDDENRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPE QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGE VIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSK KQVADELGIGIATLYRKIKKYELLNT" gene 2868990..2870180 /gene="ygeW" /locus_tag="b2870" /gene_synonym="ECK2866" /gene_synonym="JW5463" /db_xref="EcoGene:EG13053" CDS 2868990..2870180 /gene="ygeW" /locus_tag="b2870" /gene_synonym="ECK2866" /gene_synonym="JW5463" /function="putative enzyme; Not classified" /note="putative carbamoyl transferase" /codon_start=1 /transl_table=11 /product="putative carbamoyltransferase" /protein_id="AAT48152.1" /db_xref="GI:48994908" /db_xref="ASAP:ABE-0009425" /db_xref="UniProtKB/Swiss-Prot:Q46803" /db_xref="EcoGene:EG13053" /translation="MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAA LKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHG ETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQ CDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRF GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYK VMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPAD ISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQ ERVK" gene 2870238..2871434 /gene="ygeX" /locus_tag="b2871" /gene_synonym="ECK2867" /gene_synonym="JW2839" /db_xref="EcoGene:EG13054" CDS 2870238..2871434 /gene="ygeX" /locus_tag="b2871" /gene_synonym="ECK2867" /gene_synonym="JW2839" /EC_number="4.3.1.15" /function="enzyme; Not classified" /note="putative diaminopropionate ammonia-lyase" /codon_start=1 /transl_table=11 /product="2,3-diaminopropionate ammonia lyase, PLP-dependent" /protein_id="AAC75909.1" /db_xref="GI:1789235" /db_xref="ASAP:ABE-0009428" /db_xref="UniProtKB/Swiss-Prot:P66899" /db_xref="EcoGene:EG13054" /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG KHAVAP" gene 2871492..2872703 /gene="ygeY" /locus_tag="b2872" /gene_synonym="ECK2868" /gene_synonym="JW2840" /db_xref="EcoGene:EG13055" CDS 2871492..2872703 /gene="ygeY" /locus_tag="b2872" /gene_synonym="ECK2868" /gene_synonym="JW2840" /function="putative enzyme; Not classified" /note="putative deacetylase" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC75910.1" /db_xref="GI:1789236" /db_xref="ASAP:ABE-0009434" /db_xref="UniProtKB/Swiss-Prot:P65807" /db_xref="EcoGene:EG13055" /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII EQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY AAIPLSWLATE" gene 2872756..2874141 /gene="hyuA" /locus_tag="b2873" /gene_synonym="ECK2869" /gene_synonym="JW2841" /gene_synonym="ygeZ" /db_xref="EcoGene:EG13056" CDS 2872756..2874141 /gene="hyuA" /locus_tag="b2873" /gene_synonym="ECK2869" /gene_synonym="JW2841" /gene_synonym="ygeZ" /EC_number="3.5.2.-" /codon_start=1 /transl_table=11 /product="D-stereospecific phenylhydantoinase" /protein_id="AAC75911.2" /db_xref="GI:87082175" /db_xref="ASAP:ABE-0009436" /db_xref="UniProtKB/Swiss-Prot:Q46806" /db_xref="EcoGene:EG13056" /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQYKL NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF LRRKPFVPPVL" gene 2874189..2875121 /gene="yqeA" /locus_tag="b2874" /gene_synonym="ECK2870" /gene_synonym="JW2842" /db_xref="EcoGene:EG13057" CDS 2874189..2875121 /gene="yqeA" /locus_tag="b2874" /gene_synonym="ECK2870" /gene_synonym="JW2842" /function="putative enzyme; Not classified" /note="putative kinase" /codon_start=1 /transl_table=11 /product="putative amino acid kinase" /protein_id="AAC75912.1" /db_xref="GI:1789238" /db_xref="ASAP:ABE-0009438" /db_xref="UniProtKB/Swiss-Prot:Q46807" /db_xref="EcoGene:EG13057" /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGI NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ" repeat_region 2875129..2875332 /note="RIP209 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site" gene complement(2875342..2876967) /gene="yqeB" /locus_tag="b2875" /gene_synonym="ECK2871" /gene_synonym="JW2843" /db_xref="EcoGene:EG13058" CDS complement(2875342..2876967) /gene="yqeB" /locus_tag="b2875" /gene_synonym="ECK2871" /gene_synonym="JW2843" /function="putative enzyme; Not classified" /note="putative synthases" /codon_start=1 /transl_table=11 /product="XdhC-CoxI family protein with NAD(P)-binding Rossman fold" /protein_id="AAC75913.1" /db_xref="GI:1789240" /db_xref="ASAP:ABE-0009441" /db_xref="UniProtKB/Swiss-Prot:Q46808" /db_xref="EcoGene:EG13058" /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM RPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA" gene complement(2877015..2877785) /gene="yqeC" /locus_tag="b2876" /gene_synonym="ECK2872" /gene_synonym="JW5464" /db_xref="EcoGene:EG13059" CDS complement(2877015..2877785) /gene="yqeC" /locus_tag="b2876" /gene_synonym="ECK2872" /gene_synonym="JW5464" /codon_start=1 /transl_table=11 /product="putative selenium-dependent hydroxylase accessory protein" /protein_id="AAC75914.2" /db_xref="GI:87082176" /db_xref="ASAP:ABE-0009443" /db_xref="UniProtKB/Swiss-Prot:Q46809" /db_xref="EcoGene:EG13059" /translation="MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT PEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKV STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN" gene 2877888..2878466 /gene="mocA" /locus_tag="b2877" /gene_synonym="ECK2873" /gene_synonym="JW2845" /gene_synonym="ygfJ" /db_xref="EcoGene:EG13060" CDS 2877888..2878466 /gene="mocA" /locus_tag="b2877" /gene_synonym="ECK2873" /gene_synonym="JW2845" /gene_synonym="ygfJ" /codon_start=1 /transl_table=11 /product="CTP:molybdopterin cytidylyltransferase" /protein_id="AAC75915.1" /db_xref="GI:1789242" /db_xref="ASAP:ABE-0009447" /db_xref="UniProtKB/Swiss-Prot:Q46810" /db_xref="EcoGene:EG13060" /translation="MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCS RIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMG DHYSVEIENAEIILDIDTPDDFITAKERYTEI" gene 2878788..2881886 /gene="ygfK" /locus_tag="b2878" /gene_synonym="ECK2874" /gene_synonym="JW5923" /db_xref="EcoGene:EG13061" CDS 2878788..2881886 /gene="ygfK" /locus_tag="b2878" /gene_synonym="ECK2874" /gene_synonym="JW5923" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative Fe-S subunit oxidoreductase subunit" /protein_id="AAC75916.1" /db_xref="GI:1789243" /db_xref="ASAP:ABE-0009450" /db_xref="UniProtKB/Swiss-Prot:Q46811" /db_xref="EcoGene:EG13061" /translation="MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTV SVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAED ECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQ PPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTS MVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGY IGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMY MSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKP GGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDL PLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQ YNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAG YFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPD LTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVV VVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNP ERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMG VPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSH QNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPN RANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLAQDFDNSS NPGFLVEDCRVRVRLNNQSWVLNIDSKGQFNNVPPELNDMCRIISHVHQHHHYLLGRV EV" gene 2881889..2883217 /gene="ssnA" /locus_tag="b2879" /gene_synonym="ECK2875" /gene_synonym="JW2847" /gene_synonym="ygfL" /db_xref="EcoGene:EG13062" CDS 2881889..2883217 /gene="ssnA" /locus_tag="b2879" /gene_synonym="ECK2875" /gene_synonym="JW2847" /gene_synonym="ygfL" /function="putative structure; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 10074077" /note="GO_process: GO:0007049 - cell cycle" /codon_start=1 /transl_table=11 /product="putative chlorohydrolase/aminohydrolase" /protein_id="AAC75917.2" /db_xref="GI:87082177" /db_xref="ASAP:ABE-0009452" /db_xref="UniProtKB/Swiss-Prot:Q46812" /db_xref="EcoGene:EG13062" /translation="MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDA SFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEES LYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN NGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVK ATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLL NQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGG PLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIA FGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA" gene 2883268..2884047 /gene="ygfM" /locus_tag="b2880" /gene_synonym="ECK2876" /gene_synonym="JW2848" /db_xref="EcoGene:EG13063" CDS 2883268..2884047 /gene="ygfM" /locus_tag="b2880" /gene_synonym="ECK2876" /gene_synonym="JW2848" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC75918.1" /db_xref="GI:1789245" /db_xref="ASAP:ABE-0009456" /db_xref="UniProtKB/Swiss-Prot:P64557" /db_xref="EcoGene:EG13063" /translation="MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKK IAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQST IGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRT CATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQA VANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV" gene 2884044..2886914 /gene="xdhD" /locus_tag="b2881" /gene_synonym="ECK2877" /gene_synonym="JW2849" /gene_synonym="ygfN" /db_xref="EcoGene:EG13064" CDS 2884044..2886914 /gene="xdhD" /locus_tag="b2881" /gene_synonym="ECK2877" /gene_synonym="JW2849" /gene_synonym="ygfN" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding" /protein_id="AAC75919.1" /db_xref="GI:1789246" /db_xref="ASAP:ABE-0009459" /db_xref="UniProtKB/Swiss-Prot:Q46814" /db_xref="EcoGene:EG13064" /translation="MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFA GSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYND PAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATID IAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHL DVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVV AESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNS HAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCP TETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQD ILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDF RANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNF AITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEI LRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSG GADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARL AAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLV GTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGAT LRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKS ISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI" gene 2887079..2888479 /gene="xanQ" /locus_tag="b2882" /gene_synonym="ECK2878" /gene_synonym="JW2850" /gene_synonym="ygfO" /db_xref="EcoGene:EG13065" CDS 2887079..2888479 /gene="xanQ" /locus_tag="b2882" /gene_synonym="ECK2878" /gene_synonym="JW2850" /gene_synonym="ygfO" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="xanthine permease" /protein_id="AAC75920.2" /db_xref="GI:87082178" /db_xref="ASAP:ABE-0009463" /db_xref="UniProtKB/Swiss-Prot:P67444" /db_xref="EcoGene:EG13065" /translation="MSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPAL IVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIA LGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGL SLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGL CVGYIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGD ITATAMVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGV ASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGL KRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGY RQENVLPGITSAEEMD" gene 2888494..2889813 /gene="guaD" /locus_tag="b2883" /gene_synonym="ECK2879" /gene_synonym="JW5466" /gene_synonym="ygfP" /db_xref="EcoGene:EG13066" CDS 2888494..2889813 /gene="guaD" /locus_tag="b2883" /gene_synonym="ECK2879" /gene_synonym="JW5466" /gene_synonym="ygfP" /EC_number="3.5.4.3" /codon_start=1 /transl_table=11 /product="guanine deaminase" /protein_id="AAC75921.1" /db_xref="GI:1789249" /db_xref="ASAP:ABE-0009465" /db_xref="UniProtKB/Swiss-Prot:P76641" /db_xref="EcoGene:EG13066" /translation="MMSGEHTLKAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQ GKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWL NKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHIN MRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQ MAMAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAH CVHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTF NMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVME PTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN" gene 2889849..2891216 /gene="ghxQ" /locus_tag="b4464" /gene_synonym="ECK2880" /gene_synonym="JW5467" /gene_synonym="ygfQ" /gene_synonym="ygfR" /db_xref="EcoGene:EG13067" CDS 2889849..2891216 /gene="ghxQ" /locus_tag="b4464" /gene_synonym="ECK2880" /gene_synonym="JW5467" /gene_synonym="ygfQ" /gene_synonym="ygfR" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /codon_start=1 /transl_table=11 /product="guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter" /protein_id="AAT48153.1" /db_xref="GI:48994909" /db_xref="ASAP:ABE-0174113" /db_xref="UniProtKB/Swiss-Prot:Q46817" /db_xref="EcoGene:EG13067" /translation="MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLA MVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTA FSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLL LIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIA ISIIGLIFDPAVKYHGLVAMPSLTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVF DATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTA AGGKTGLTATVVGALFLLILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFI DAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYA GGWAI" gene complement(2891252..2891740) /gene="ygfS" /locus_tag="b2886" /gene_synonym="ECK2881" /gene_synonym="JW5468" /db_xref="EcoGene:EG13069" CDS complement(2891252..2891740) /gene="ygfS" /locus_tag="b2886" /gene_synonym="ECK2881" /gene_synonym="JW5468" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative 4Fe-4S ferredoxin-type oxidoreductase subunit" /protein_id="AAC75924.2" /db_xref="GI:87082179" /db_xref="ASAP:ABE-0009471" /db_xref="UniProtKB/Swiss-Prot:Q46819" /db_xref="EcoGene:EG13069" /translation="MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQ RLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMIT IQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGEN PL" gene complement(2891740..2893659) /gene="ygfT" /locus_tag="b2887" /gene_synonym="ECK2882" /gene_synonym="JW5469" /db_xref="EcoGene:EG13070" CDS complement(2891740..2893659) /gene="ygfT" /locus_tag="b2887" /gene_synonym="ECK2882" /gene_synonym="JW5469" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit" /protein_id="AAC75925.2" /db_xref="GI:87082180" /db_xref="ASAP:ABE-0009473" /db_xref="UniProtKB/Swiss-Prot:Q46820" /db_xref="EcoGene:EG13070" /translation="MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHV VGKGQAANPVACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVV EMVDTIAQKCDLCNQRSSGTQACIEVCPTQALRLMDDKGLQQIKVARQRKTAAGKASS DAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKAN CNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKD HSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGV QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDL TSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVE GKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQF NVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQ AHAMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGR QAARDMLTLFDTKAS" gene 2894095..2895543 /gene="uacT" /locus_tag="b2888" /gene_synonym="ECK2883" /gene_synonym="JW5470" /gene_synonym="ygfU" /db_xref="EcoGene:EG13071" CDS 2894095..2895543 /gene="uacT" /locus_tag="b2888" /gene_synonym="ECK2883" /gene_synonym="JW5470" /gene_synonym="ygfU" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="putative permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="uric acid permease" /protein_id="AAC75926.2" /db_xref="GI:87082181" /db_xref="ASAP:ABE-0009478" /db_xref="UniProtKB/Swiss-Prot:Q46821" /db_xref="EcoGene:EG13071" /translation="MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGL SIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG FLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE" gene 2895545..2895670 /gene="yqfG" /locus_tag="b4684" /gene_synonym="ECK4499" /db_xref="EcoGene:EG14489" CDS 2895545..2895670 /gene="yqfG" /locus_tag="b4684" /gene_synonym="ECK4499" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO60006.1" /db_xref="GI:226510972" /db_xref="UniProtKB/Swiss-Prot:C1P614" /db_xref="EcoGene:EG14489" /translation="MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF" gene 2895793..2896341 /gene="idi" /locus_tag="b2889" /gene_synonym="ECK2884" /gene_synonym="JW2857" /gene_synonym="ygfV" /db_xref="EcoGene:EG13072" CDS 2895793..2896341 /gene="idi" /locus_tag="b2889" /gene_synonym="ECK2884" /gene_synonym="JW2857" /gene_synonym="ygfV" /EC_number="5.3.3.2" /function="putative enzyme; Not classified" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="isopentenyl diphosphate isomerase" /protein_id="AAC75927.1" /db_xref="GI:1789255" /db_xref="ASAP:ABE-0009484" /db_xref="UniProtKB/Swiss-Prot:Q46822" /db_xref="EcoGene:EG13072" /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKG QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF RYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP WMVMQATNREARKRLSAFTQLK" gene complement(2896385..2897902) /gene="lysS" /locus_tag="b2890" /gene_synonym="asuD" /gene_synonym="ECK2885" /gene_synonym="herC" /gene_synonym="JW2858" /db_xref="EcoGene:EG10552" CDS complement(2896385..2897902) /gene="lysS" /locus_tag="b2890" /gene_synonym="asuD" /gene_synonym="ECK2885" /gene_synonym="herC" /gene_synonym="JW2858" /EC_number="6.1.1.6" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="lysine tRNA synthetase, constitutive" /protein_id="AAC75928.1" /db_xref="GI:1789256" /db_xref="ASAP:ABE-0009486" /db_xref="UniProtKB/Swiss-Prot:P0A8N3" /db_xref="EcoGene:EG10552" /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE YPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK" gene complement(2897912..2899010) /gene="prfB" /locus_tag="b2891" /gene_synonym="ECK2886" /gene_synonym="JW5847" /gene_synonym="supK" /db_xref="EcoGene:EG10762" CDS complement(join(2897912..2898934,2898936..2899010)) /gene="prfB" /locus_tag="b2891" /gene_synonym="ECK2886" /gene_synonym="JW5847" /gene_synonym="supK" /function="factor; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 3889910" /ribosomal_slippage /note="an in-frame premature UGA termination codon is located within the prfB sequence, and a naturally occuring +1 frameshift is required for synthesis of RF-2; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="peptide chain release factor RF-2" /protein_id="AAC75929.1" /db_xref="GI:2367172" /db_xref="ASAP:ABE-0009488" /db_xref="UniProtKB/Swiss-Prot:P07012" /db_xref="EcoGene:EG10762" /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS SAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQN DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK DLRTGVETRNTQAVLDGSLDQFIEASLKAGL" gene complement(2899101..2900834) /gene="recJ" /locus_tag="b2892" /gene_synonym="ECK2887" /gene_synonym="JW2860" /db_xref="EcoGene:EG10830" CDS complement(2899101..2900834) /gene="recJ" /locus_tag="b2892" /gene_synonym="ECK2887" /gene_synonym="JW2860" /EC_number="3.1.-.-" /function="enzyme; Degradation of DNA" /note="ssDNA exonuclease, 5' --> 3' specific; GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="ssDNA exonuclease, 5' --> 3'-specific" /protein_id="AAC75930.1" /db_xref="GI:1789259" /db_xref="ASAP:ABE-0009492" /db_xref="UniProtKB/Swiss-Prot:P21893" /db_xref="EcoGene:EG10830" /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD HHLPGDTLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERNIA IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ GMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFKLFQQRFG ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS LQIIIDNIWPI" gene complement(2900840..2901550) /gene="dsbC" /locus_tag="b2893" /gene_synonym="ECK2888" /gene_synonym="JW2861" /gene_synonym="xprA" /db_xref="EcoGene:EG11070" CDS complement(2900840..2901550) /gene="dsbC" /locus_tag="b2893" /gene_synonym="ECK2888" /gene_synonym="JW2861" /gene_synonym="xprA" /EC_number="5.3.4.1" /function="enzyme; Surface structures" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="protein disulfide isomerase II" /protein_id="AAC75931.1" /db_xref="GI:1789260" /db_xref="ASAP:ABE-0009494" /db_xref="UniProtKB/Swiss-Prot:P0AEG6" /db_xref="EcoGene:EG11070" /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYK APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIW CAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQP PKEMKEFLDEHQKMTSGK" gene complement(2901575..2902471) /gene="xerD" /locus_tag="b2894" /gene_synonym="ECK2889" /gene_synonym="JW2862" /gene_synonym="xprB" /db_xref="EcoGene:EG11071" CDS complement(2901575..2902471) /gene="xerD" /locus_tag="b2894" /gene_synonym="ECK2889" /gene_synonym="JW2862" /gene_synonym="xprB" /function="enzyme; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 8402918" /note="GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="site-specific tyrosine recombinase" /protein_id="AAC75932.1" /db_xref="GI:1789261" /db_xref="ASAP:ABE-0009500" /db_xref="UniProtKB/Swiss-Prot:P0A8P8" /db_xref="EcoGene:EG11071" /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT QIYTHVATERLRQLHQQHHPRA" gene 2902583..2903104 /gene="fldB" /locus_tag="b2895" /gene_synonym="ECK2890" /gene_synonym="JW2863" /db_xref="EcoGene:EG12697" CDS 2902583..2903104 /gene="fldB" /locus_tag="b2895" /gene_synonym="ECK2890" /gene_synonym="JW2863" /function="enzyme; Energy metabolism, carbon: Aerobic respiration" /note="GO_function: GO:0009055 - electron carrier activity; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="flavodoxin 2" /protein_id="AAC75933.1" /db_xref="GI:1789262" /db_xref="ASAP:ABE-0009503" /db_xref="UniProtKB/Swiss-Prot:P0ABY4" /db_xref="EcoGene:EG12697" /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW CEQILNEMAEHYA" gene complement(2903144..2903551) /gene="cptA" /locus_tag="b2896" /gene_synonym="ECK2891" /gene_synonym="JW2864" /gene_synonym="pigV" /gene_synonym="ygfX" /db_xref="EcoGene:EG13074" CDS complement(2903144..2903551) /gene="cptA" /locus_tag="b2896" /gene_synonym="ECK2891" /gene_synonym="JW2864" /gene_synonym="pigV" /gene_synonym="ygfX" /codon_start=1 /transl_table=11 /product="toxin of CptAB toxin-antitoxin pair" /protein_id="AAC75934.1" /db_xref="GI:1789263" /db_xref="ASAP:ABE-0009505" /db_xref="UniProtKB/Swiss-Prot:Q46824" /db_xref="EcoGene:EG13074" /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR" gene complement(2903532..2903798) /gene="sdhE" /locus_tag="b2897" /gene_synonym="cptB" /gene_synonym="ECK2892" /gene_synonym="JW2865" /gene_synonym="ygfY" /db_xref="EcoGene:EG13075" CDS complement(2903532..2903798) /gene="sdhE" /locus_tag="b2897" /gene_synonym="cptB" /gene_synonym="ECK2892" /gene_synonym="JW2865" /gene_synonym="ygfY" /function="factor; Energy metabolism, carbon: TCA cycle" /codon_start=1 /transl_table=11 /product="flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair" /protein_id="AAC75935.1" /db_xref="GI:1789264" /db_xref="ASAP:ABE-0009507" /db_xref="UniProtKB/Swiss-Prot:P64559" /db_xref="EcoGene:EG13075" /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI" gene 2904041..2905021 /gene="ygfZ" /locus_tag="b2898" /gene_synonym="ECK2893" /gene_synonym="JW2866" /gene_synonym="yzzW" /db_xref="EcoGene:EG12685" CDS 2904041..2905021 /gene="ygfZ" /locus_tag="b2898" /gene_synonym="ECK2893" /gene_synonym="JW2866" /gene_synonym="yzzW" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster repair protein, plumbagin resistance" /protein_id="AAC75936.1" /db_xref="GI:1789265" /db_xref="ASAP:ABE-0009512" /db_xref="UniProtKB/Swiss-Prot:P0ADE8" /db_xref="EcoGene:EG12685" /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ VTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA VFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAER FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE" repeat_region 2905049..2905203 /note="REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2905217..2905876) /gene="yqfA" /locus_tag="b2899" /gene_synonym="ECK2894" /gene_synonym="JW2867" /db_xref="EcoGene:EG13077" CDS complement(2905217..2905876) /gene="yqfA" /locus_tag="b2899" /gene_synonym="ECK2894" /gene_synonym="JW2867" /function="putative enzyme; Not classified" /note="putative oxidoreductase; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="hemolysin III family HylIII inner membrane protein" /protein_id="AAC75937.1" /db_xref="GI:1789266" /db_xref="ASAP:ABE-0009515" /db_xref="UniProtKB/Swiss-Prot:P67153" /db_xref="EcoGene:EG13077" /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQ A" gene complement(2906040..2906351) /gene="yqfB" /locus_tag="b2900" /gene_synonym="ECK2895" /gene_synonym="JW2868" /db_xref="EcoGene:EG13078" CDS complement(2906040..2906351) /gene="yqfB" /locus_tag="b2900" /gene_synonym="ECK2895" /gene_synonym="JW2868" /codon_start=1 /transl_table=11 /product="UPF0267 family protein" /protein_id="AAC75938.1" /db_xref="GI:1789267" /db_xref="ASAP:ABE-0009518" /db_xref="UniProtKB/Swiss-Prot:P67603" /db_xref="EcoGene:EG13078" /translation="MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELKKVIADIYPGQTQFYVIEFKC L" gene 2906390..2907829 /gene="bglA" /locus_tag="b2901" /gene_synonym="bglD" /gene_synonym="ECK2896" /gene_synonym="JW2869" /gene_synonym="yqfC" /db_xref="EcoGene:EG13079" CDS 2906390..2907829 /gene="bglA" /locus_tag="b2901" /gene_synonym="bglD" /gene_synonym="ECK2896" /gene_synonym="JW2869" /gene_synonym="yqfC" /EC_number="3.2.1.86" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="6-phospho-beta-glucosidase A; cryptic; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="6-phospho-beta-glucosidase A" /protein_id="AAC75939.1" /db_xref="GI:2367174" /db_xref="ASAP:ABE-0009523" /db_xref="UniProtKB/Swiss-Prot:Q46829" /db_xref="EcoGene:EG13079" /translation="MIVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGA HGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGD EAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRF AEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQ FVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLR GYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISG FEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSI NDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKH DDGTGDMSRSRKKSFNWYKEVIASNGEKL" repeat_region 2907841..2907868 /note="REP211 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2907886..2908629) /gene="ygfF" /locus_tag="b2902" /gene_synonym="ECK2897" /gene_synonym="JW2870" /gene_synonym="yqfD" /db_xref="EcoGene:EG12971" CDS complement(2907886..2908629) /gene="ygfF" /locus_tag="b2902" /gene_synonym="ECK2897" /gene_synonym="JW2870" /gene_synonym="yqfD" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative NAD(P)-dependent oxidoreductase" /protein_id="AAC75940.1" /db_xref="GI:2367175" /db_xref="ASAP:ABE-0009526" /db_xref="UniProtKB/Swiss-Prot:P52037" /db_xref="EcoGene:EG12971" /translation="MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMN LITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE RINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASK GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQA EEVAQAIVWLLSDKASYVTGSFIDLAGGK" gene complement(2908896..2911769) /gene="gcvP" /locus_tag="b2903" /gene_synonym="ECK2898" /gene_synonym="JW2871" /db_xref="EcoGene:EG11810" CDS complement(2908896..2911769) /gene="gcvP" /locus_tag="b2903" /gene_synonym="ECK2898" /gene_synonym="JW2871" /EC_number="1.4.4.2" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="glycine decarboxylase, P protein of glycine cleavage system; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex" /protein_id="AAC75941.1" /db_xref="GI:1789269" /db_xref="ASAP:ABE-0009531" /db_xref="UniProtKB/Swiss-Prot:P33195" /db_xref="EcoGene:EG11810" /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC VEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFNVLLGDNHGLDID TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD AFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLM VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ" gene complement(2911888..2912277) /gene="gcvH" /locus_tag="b2904" /gene_synonym="ECK2899" /gene_synonym="JW2872" /db_xref="EcoGene:EG10371" CDS complement(2911888..2912277) /gene="gcvH" /locus_tag="b2904" /gene_synonym="ECK2899" /gene_synonym="JW2872" /function="carrier; Central intermediary metabolism: Pool, multipurpose conversions" /note="in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="glycine cleavage complex lipoylprotein" /protein_id="AAC75942.1" /db_xref="GI:1789271" /db_xref="ASAP:ABE-0009534" /db_xref="UniProtKB/Swiss-Prot:P0A6T9" /db_xref="EcoGene:EG10371" /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI FKIKASDESELESLLDATAYEALLEDE" gene complement(2912301..2913395) /gene="gcvT" /locus_tag="b2905" /gene_synonym="ECK2900" /gene_synonym="JW2873" /db_xref="EcoGene:EG11442" CDS complement(2912301..2913395) /gene="gcvT" /locus_tag="b2905" /gene_synonym="ECK2900" /gene_synonym="JW2873" /EC_number="2.1.2.10" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex" /protein_id="AAC75943.1" /db_xref="GI:1789272" /db_xref="ASAP:ABE-0009536" /db_xref="UniProtKB/Swiss-Prot:P27248" /db_xref="EcoGene:EG11442" /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI GETAIVQIRNREMPVKVTKPVFVRNGKAVA" gene complement(2913843..2915045) /gene="ubiI" /locus_tag="b2906" /gene_synonym="ECK2901" /gene_synonym="JW2874" /gene_synonym="visC" /db_xref="EcoGene:EG11333" CDS complement(2913843..2915045) /gene="ubiI" /locus_tag="b2906" /gene_synonym="ECK2901" /gene_synonym="JW2874" /gene_synonym="visC" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /codon_start=1 /transl_table=11 /product="2-octaprenylphenol hydroxylase, FAD-dependent" /protein_id="AAC75944.1" /db_xref="GI:1789273" /db_xref="ASAP:ABE-0009543" /db_xref="UniProtKB/Swiss-Prot:P25535" /db_xref="EcoGene:EG11333" /translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANA PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS HLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV IGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA RQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL NDLPEWLR" gene complement(2915068..2916246) /gene="ubiH" /locus_tag="b2907" /gene_synonym="acd" /gene_synonym="ECK2902" /gene_synonym="JW2875" /gene_synonym="visB" /db_xref="EcoGene:EG11324" CDS complement(2915068..2916246) /gene="ubiH" /locus_tag="b2907" /gene_synonym="acd" /gene_synonym="ECK2902" /gene_synonym="JW2875" /gene_synonym="visB" /EC_number="1.14.13.-" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /note="2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone; GO_process: GO:0009060 - aerobic respiration" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding" /protein_id="AAC75945.1" /db_xref="GI:1789274" /db_xref="ASAP:ABE-0009545" /db_xref="UniProtKB/Swiss-Prot:P25534" /db_xref="EcoGene:EG11324" /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTHAARS ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAQERGEDMGDYGVLCRYQQ RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR " gene complement(2916243..2917568) /gene="pepP" /locus_tag="b2908" /gene_synonym="ECK2903" /gene_synonym="JW2876" /db_xref="EcoGene:EG10697" CDS complement(2916243..2917568) /gene="pepP" /locus_tag="b2908" /gene_synonym="ECK2903" /gene_synonym="JW2876" /EC_number="3.4.11.9" /function="enzyme; Degradation of proteins, peptides, glyco" /codon_start=1 /transl_table=11 /product="proline aminopeptidase P II" /protein_id="AAC75946.1" /db_xref="GI:1789275" /db_xref="ASAP:ABE-0009549" /db_xref="UniProtKB/Swiss-Prot:P15034" /db_xref="EcoGene:EG10697" /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAP ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH EFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRT FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ" gene complement(2917594..2918172) /gene="ygfB" /locus_tag="b2909" /gene_synonym="ECK2904" /gene_synonym="JW5473" /db_xref="EcoGene:EG11323" CDS complement(2917594..2918172) /gene="ygfB" /locus_tag="b2909" /gene_synonym="ECK2904" /gene_synonym="JW5473" /codon_start=1 /transl_table=11 /product="UPF0149 family protein" /protein_id="AAC75947.2" /db_xref="GI:87082182" /db_xref="ASAP:ABE-0009551" /db_xref="UniProtKB/Swiss-Prot:P0A8C4" /db_xref="EcoGene:EG11323" /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH" gene 2918340..2918669 /gene="zapA" /locus_tag="b2910" /gene_synonym="ECK2905" /gene_synonym="JW2878" /gene_synonym="ygfE" /db_xref="EcoGene:EG12878" CDS 2918340..2918669 /gene="zapA" /locus_tag="b2910" /gene_synonym="ECK2905" /gene_synonym="JW2878" /gene_synonym="ygfE" /codon_start=1 /transl_table=11 /product="FtsZ stabilizer" /protein_id="AAC75948.1" /db_xref="GI:1789277" /db_xref="ASAP:ABE-0009554" /db_xref="UniProtKB/Swiss-Prot:P0ADS2" /db_xref="EcoGene:EG12878" /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE KTNQNFE" gene 2918711..2918893 /gene="ssrS" /locus_tag="b2911" /gene_synonym="ECK2906" /gene_synonym="JWR0067" /gene_synonym="ssr" /gene_synonym="ssrI" /db_xref="EcoGene:EG30099" ncRNA 2918711..2918893 /ncRNA_class="other" /gene="ssrS" /locus_tag="b2911" /gene_synonym="ECK2906" /gene_synonym="JWR0067" /gene_synonym="ssr" /gene_synonym="ssrI" /product="6S RNA inhibits RNA polymerase promoter binding" /note="template for RNA-directed pRNA synthesis by RNAP; mimics an open promoter" /function="2.2.6 information transfer; RNA related; rRNA, stable RNA" /function="7.1 location of gene products; cytoplasm" /function="modulates promoter use via interaction with RNA polymerase" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:ABE-0009556" /db_xref="EcoGene:EG30099" gene 2918969..2919517 /gene="fau" /locus_tag="b2912" /gene_synonym="ECK2907" /gene_synonym="JW2879" /gene_synonym="ygfA" /db_xref="EcoGene:EG11158" CDS 2918969..2919517 /gene="fau" /locus_tag="b2912" /gene_synonym="ECK2907" /gene_synonym="JW2879" /gene_synonym="ygfA" /function="putative enzyme; Not classified" /note="putative ligase" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase family protein" /protein_id="AAC75949.1" /db_xref="GI:1789278" /db_xref="ASAP:ABE-0009559" /db_xref="UniProtKB/Swiss-Prot:P0AC28" /db_xref="EcoGene:EG11158" /translation="MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFD GELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVR DVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEK LPVEEWDIPLPAVVTPSKVWEW" gene 2919577..2919716 /gene="sibC" /locus_tag="b4446" /gene_synonym="ECK2908" /gene_synonym="JWR0250" /gene_synonym="QUAD1c" /gene_synonym="rygC" /gene_synonym="t27" /db_xref="EcoGene:EG31159" ncRNA 2919577..2919716 /ncRNA_class="antisense_RNA" /gene="sibC" /locus_tag="b4446" /gene_synonym="ECK2908" /gene_synonym="JWR0250" /gene_synonym="QUAD1c" /gene_synonym="rygC" /gene_synonym="t27" /product="sRNA antisense regulator of toxic IbsC protein" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047266" /db_xref="EcoGene:EG31159" gene complement(2919618..2919677) /gene="ibsC" /locus_tag="b4665" /gene_synonym="ECK4480" /db_xref="EcoGene:EG14470" CDS complement(2919618..2919677) /gene="ibsC" /locus_tag="b4665" /gene_synonym="ECK4480" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO60007.1" /db_xref="GI:226510973" /db_xref="UniProtKB/Swiss-Prot:C1P615" /db_xref="EcoGene:EG14470" /translation="MMRLVIILIVLLLISFSAY" gene complement(2919906..2921138) /gene="serA" /locus_tag="b2913" /gene_synonym="ECK2909" /gene_synonym="JW2880" /db_xref="EcoGene:EG10944" CDS complement(2919906..2921138) /gene="serA" /locus_tag="b2913" /gene_synonym="ECK2909" /gene_synonym="JW2880" /EC_number="1.1.1.95" /function="enzyme; Amino acid biosynthesis: Serine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006564 - L-serine biosynthetic process" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="AAC75950.1" /db_xref="GI:1789279" /db_xref="ASAP:ABE-0009561" /db_xref="UniProtKB/Swiss-Prot:P0A9T0" /db_xref="EcoGene:EG10944" /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK ALQAMKAIPGTIRARLLY" gene complement(2921394..2922053) /gene="rpiA" /locus_tag="b2914" /gene_synonym="ECK2910" /gene_synonym="JW5475" /gene_synonym="ygfC" /db_xref="EcoGene:EG11443" CDS complement(2921394..2922053) /gene="rpiA" /locus_tag="b2914" /gene_synonym="ECK2910" /gene_synonym="JW5475" /gene_synonym="ygfC" /EC_number="5.3.1.6" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /experiment="N-terminus verified by Edman degradation: PMID 8366047,9298646,9600841,9740056" /note="ribosephosphate isomerase, constitutive; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="ribose 5-phosphate isomerase, constitutive" /protein_id="AAC75951.1" /db_xref="GI:1789280" /db_xref="ASAP:ABE-0009567" /db_xref="UniProtKB/Swiss-Prot:P0A7Z0" /db_xref="EcoGene:EG11443" /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV K" gene complement(2922109..2922429) /gene="yqfE" /locus_tag="b2915" /gene_synonym="ECK2911" /gene_synonym="JW2882" /pseudo /db_xref="EcoGene:EG13163" CDS complement(2922109..2922429) /gene="yqfE" /locus_tag="b2915" /gene_synonym="ECK2911" /gene_synonym="JW2882" /note="pseudogene, LysR family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009570" /db_xref="UniProtKB/Swiss-Prot:P64562" /db_xref="EcoGene:EG13163" gene 2922481..2923374 /gene="argP" /locus_tag="b2916" /gene_synonym="can" /gene_synonym="canR" /gene_synonym="ECK2912" /gene_synonym="iciA" /gene_synonym="JW2883" /db_xref="EcoGene:EG10490" CDS 2922481..2923374 /gene="argP" /locus_tag="b2916" /gene_synonym="can" /gene_synonym="canR" /gene_synonym="ECK2912" /gene_synonym="iciA" /gene_synonym="JW2883" /function="regulator; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2034653" /note="replication initiation inhibitor, binds to 13-mers at oriC; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006261 - DNA-dependent DNA replication; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor" /protein_id="AAC75953.1" /db_xref="GI:1789283" /db_xref="ASAP:ABE-0009574" /db_xref="UniProtKB/Swiss-Prot:P0A8S1" /db_xref="EcoGene:EG10490" /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES RMMRKVTDALLDYGHKVLRQD" repeat_region 2923388..2923408 /note="REP212 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2923578..2925722 /gene="scpA" /locus_tag="b2917" /gene_synonym="ECK2913" /gene_synonym="JW2884" /gene_synonym="mcm" /gene_synonym="sbm" /gene_synonym="yliK" /db_xref="EcoGene:EG11444" CDS 2923578..2925722 /gene="scpA" /locus_tag="b2917" /gene_synonym="ECK2913" /gene_synonym="JW2884" /gene_synonym="mcm" /gene_synonym="sbm" /gene_synonym="yliK" /EC_number="5.4.99.2" /function="enzyme; Degradation of small molecules: Fatty acids" /note="methylmalonyl-CoA mutase (MCM); GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="methylmalonyl-CoA mutase" /protein_id="AAC75954.1" /db_xref="GI:1789284" /db_xref="ASAP:ABE-0009577" /db_xref="UniProtKB/Swiss-Prot:P27253" /db_xref="EcoGene:EG11444" /translation="MSNVQEWQQLANKELSRREKTVDSLVHQTAEGIAIKPLYTEADL DNLEVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGL SVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAV LPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCS GNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFF FGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNV IRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPL AGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGK RVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIASLERIRATRDDAAVTAALNALTHAA QHNENLLAAAVNAARVRATLGEISDALEVAFDRYLVPSQCVTGVIAQSYHQSEKSASE FDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTP EEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAF LQERGVAAIYGPGTPMLDSVRDVLNLISQHHD" gene 2925715..2926710 /gene="argK" /locus_tag="b2918" /gene_synonym="ECK2914" /gene_synonym="JW2885" /gene_synonym="meaB" /gene_synonym="scpK?" /gene_synonym="ygfD" /db_xref="EcoGene:EG11445" CDS 2925715..2926710 /gene="argK" /locus_tag="b2918" /gene_synonym="ECK2914" /gene_synonym="JW2885" /gene_synonym="meaB" /gene_synonym="scpK?" /gene_synonym="ygfD" /function="phenotype; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="membrane ATPase/protein kinase" /protein_id="AAC75955.1" /db_xref="GI:1789285" /db_xref="ASAP:ABE-0009579" /db_xref="UniProtKB/Swiss-Prot:P27254" /db_xref="EcoGene:EG11445" /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL DAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL GDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVE WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD" gene 2926721..2927506 /gene="scpB" /locus_tag="b2919" /gene_synonym="ECK2915" /gene_synonym="JW2886" /gene_synonym="mmcD" /gene_synonym="ygfG" /db_xref="EcoGene:EG12972" CDS 2926721..2927506 /gene="scpB" /locus_tag="b2919" /gene_synonym="ECK2915" /gene_synonym="JW2886" /gene_synonym="mmcD" /gene_synonym="ygfG" /EC_number="4.1.1.41" /function="enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="methylmalonyl-CoA decarboxylase, biotin-independent" /protein_id="AAC75956.2" /db_xref="GI:87082183" /db_xref="ASAP:ABE-0009581" /db_xref="UniProtKB/Swiss-Prot:P52045" /db_xref="EcoGene:EG12972" /translation="MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH" gene 2927530..2929008 /gene="scpC" /locus_tag="b2920" /gene_synonym="ECK2916" /gene_synonym="JW2887" /gene_synonym="ygfH" /db_xref="EcoGene:EG12973" CDS 2927530..2929008 /gene="scpC" /locus_tag="b2920" /gene_synonym="ECK2916" /gene_synonym="JW2887" /gene_synonym="ygfH" /EC_number="2.8.3.-" /function="enzyme; Not classified" /note="putative coenzyme A transferase" /codon_start=1 /transl_table=11 /product="propionyl-CoA:succinate CoA transferase" /protein_id="AAC75957.1" /db_xref="GI:1789287" /db_xref="ASAP:ABE-0009583" /db_xref="UniProtKB/Swiss-Prot:P52043" /db_xref="EcoGene:EG12973" /translation="METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARR ANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSF VDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIE LNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPD AGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENP VIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRP QEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSI FMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCA HPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG" gene complement(2929005..2929901) /gene="ygfI" /locus_tag="b2921" /gene_synonym="ECK2917" /gene_synonym="JW5476" /db_xref="EcoGene:EG12974" CDS complement(2929005..2929901) /gene="ygfI" /locus_tag="b2921" /gene_synonym="ECK2917" /gene_synonym="JW5476" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC75958.2" /db_xref="GI:87082184" /db_xref="ASAP:ABE-0009585" /db_xref="UniProtKB/Swiss-Prot:P52044" /db_xref="EcoGene:EG12974" /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI RNHRYTATMLQHIAEDRDGTSH" gene complement(2930068..2930808) /gene="yggE" /locus_tag="b2922" /gene_synonym="ECK2918" /gene_synonym="JW2889" /db_xref="EcoGene:EG11244" CDS complement(2930068..2930808) /gene="yggE" /locus_tag="b2922" /gene_synonym="ECK2918" /gene_synonym="JW2889" /function="phenotype; Not classified" /note="putative actin" /codon_start=1 /transl_table=11 /product="oxidative stress defense protein" /protein_id="AAC75959.1" /db_xref="GI:1789289" /db_xref="ASAP:ABE-0009588" /db_xref="UniProtKB/Swiss-Prot:P0ADS6" /db_xref="EcoGene:EG11244" /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA AIQFDDQVDVVFQLEPVDQQPAKTPAAQ" gene complement(2930901..2931536) /gene="argO" /locus_tag="b2923" /gene_synonym="ECK2919" /gene_synonym="JW2890" /gene_synonym="yggA" /db_xref="EcoGene:EG11159" CDS complement(2930901..2931536) /gene="argO" /locus_tag="b2923" /gene_synonym="ECK2919" /gene_synonym="JW2890" /gene_synonym="yggA" /codon_start=1 /transl_table=11 /product="arginine transporter" /protein_id="AAC75960.1" /db_xref="GI:1789290" /db_xref="ASAP:ABE-0009591" /db_xref="UniProtKB/Swiss-Prot:P11667" /db_xref="EcoGene:EG11159" /translation="MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAE VMKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF FGLALLAAWLAPRLRTAKAQRIINLVVGCVMWFIALQLARDGIAHAQALFS" gene complement(2931675..2932535) /gene="mscS" /locus_tag="b2924" /gene_synonym="ECK2920" /gene_synonym="JW2891" /gene_synonym="yggB" /db_xref="EcoGene:EG11160" CDS complement(2931675..2932535) /gene="mscS" /locus_tag="b2924" /gene_synonym="ECK2920" /gene_synonym="JW2891" /gene_synonym="yggB" /function="transport; Transport of small molecules: Other" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, small conductance" /protein_id="AAC75961.1" /db_xref="GI:1789291" /db_xref="ASAP:ABE-0009595" /db_xref="UniProtKB/Swiss-Prot:P0C0S1" /db_xref="EcoGene:EG11160" /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN FKRVKEDKAA" repeat_region 2932731..2932828 /note="RIP213 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(2932893..2933972) /gene="fbaA" /locus_tag="b2925" /gene_synonym="ald" /gene_synonym="ECK2921" /gene_synonym="fba" /gene_synonym="fda" /gene_synonym="JW2892" /db_xref="EcoGene:EG10282" CDS complement(2932893..2933972) /gene="fbaA" /locus_tag="b2925" /gene_synonym="ald" /gene_synonym="ECK2921" /gene_synonym="fba" /gene_synonym="fda" /gene_synonym="JW2892" /EC_number="4.1.2.13" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase, class II" /protein_id="AAC75962.1" /db_xref="GI:1789293" /db_xref="ASAP:ABE-0009600" /db_xref="UniProtKB/Swiss-Prot:P0AB71" /db_xref="EcoGene:EG10282" /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIK DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW LRAGQTSMIARLEKAFQELNAIDVL" gene complement(2934187..2935350) /gene="pgk" /locus_tag="b2926" /gene_synonym="ECK2922" /gene_synonym="JW2893" /db_xref="EcoGene:EG10703" CDS complement(2934187..2935350) /gene="pgk" /locus_tag="b2926" /gene_synonym="ECK2922" /gene_synonym="JW2893" /EC_number="2.7.2.3" /function="enzyme; Energy metabolism, carbon: Glycolysis" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006096 - glycolysis; GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="AAC75963.1" /db_xref="GI:1789294" /db_xref="ASAP:ABE-0009605" /db_xref="UniProtKB/Swiss-Prot:P0A799" /db_xref="EcoGene:EG10703" /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK" gene complement(2935400..2936419) /gene="epd" /locus_tag="b2927" /gene_synonym="ECK2923" /gene_synonym="gapB" /gene_synonym="JW2894" /db_xref="EcoGene:EG10368" CDS complement(2935400..2936419) /gene="epd" /locus_tag="b2927" /gene_synonym="ECK2923" /gene_synonym="gapB" /gene_synonym="JW2894" /EC_number="1.2.1.9" /function="enzyme; Central intermediary metabolism" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0008615 - pyridoxine biosynthetic process; GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="D-erythrose 4-phosphate dehydrogenase" /protein_id="AAC75964.1" /db_xref="GI:1789295" /db_xref="ASAP:ABE-0009607" /db_xref="UniProtKB/Swiss-Prot:P0A9B6" /db_xref="EcoGene:EG10368" /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA TVAFR" gene complement(2936704..2937417) /gene="yggC" /locus_tag="b2928" /gene_synonym="ECK2924" /gene_synonym="JW2895" /db_xref="EcoGene:EG11161" CDS complement(2936704..2937417) /gene="yggC" /locus_tag="b2928" /gene_synonym="ECK2924" /gene_synonym="JW2895" /function="putative enzyme; Not classified" /note="putative kinase" /codon_start=1 /transl_table=11 /product="putative PanK family P-loop kinase" /protein_id="AAC75965.1" /db_xref="GI:1789296" /db_xref="ASAP:ABE-0009610" /db_xref="UniProtKB/Swiss-Prot:P11664" /db_xref="EcoGene:EG11161" /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLHMLAALQTVNPQRRT VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA PETFDVAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK WLELASFCDFSIFIHAPAQILRERLISRKIAGGLTRQVAEAFYARTDGPNVERVLMNS RQANLIVEMTEEGRYHFTS" gene complement(2937414..2937923) /gene="yggD" /locus_tag="b2929" /gene_synonym="ECK2925" /gene_synonym="JW2896" /db_xref="EcoGene:EG11162" CDS complement(2937414..2937923) /gene="yggD" /locus_tag="b2929" /gene_synonym="ECK2925" /gene_synonym="JW2896" /function="putative regulator; Not classified" /note="putative transcriptional regulator" /codon_start=1 /transl_table=11 /product="MtlR family putative transcriptional repressor" /protein_id="AAC75966.1" /db_xref="GI:1789297" /db_xref="ASAP:ABE-0009612" /db_xref="UniProtKB/Swiss-Prot:P11663" /db_xref="EcoGene:EG11162" /translation="MATLTEDDVLEQLDAQDNLFSFMKTAHTILLQGIRQFLPSLFVD NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFSVWSEARFSGMVKTALTLAV TTTLKELTP" gene complement(2937945..2938910) /gene="yggF" /locus_tag="b2930" /gene_synonym="ECK2926" /gene_synonym="JW2897" /gene_synonym="yggK" /db_xref="EcoGene:EG11245" CDS complement(2937945..2938910) /gene="yggF" /locus_tag="b2930" /gene_synonym="ECK2926" /gene_synonym="JW2897" /gene_synonym="yggK" /codon_start=1 /transl_table=11 /product="fructose 1,6 bisphosphatase isozyme" /protein_id="AAC75967.1" /db_xref="GI:1789298" /db_xref="ASAP:ABE-0009615" /db_xref="UniProtKB/Swiss-Prot:P21437" /db_xref="EcoGene:EG11245" /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV MAFAPRDSLLHAPDMYMKKLVVNRLAAGAIDLSLPLTDNLRNVAKALGKPLDKLRMVT LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC AVKALGGDMQAELIDFCQAKGDYTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGND ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH" gene complement(2938907..2940184) /gene="yggP" /locus_tag="b4465" /gene_synonym="ECK2927" /gene_synonym="JW5477" /db_xref="EcoGene:EG12976" CDS complement(2938907..2940184) /gene="yggP" /locus_tag="b4465" /gene_synonym="ECK2927" /gene_synonym="JW5477" /codon_start=1 /transl_table=11 /product="putative Zn-binding dehydrogenase" /protein_id="AAT48154.1" /db_xref="GI:48994910" /db_xref="ASAP:ABE-0174095" /db_xref="UniProtKB/Swiss-Prot:P52048" /db_xref="EcoGene:EG12976" /translation="MKTKVAAIYGKRDVRLRVFELPEITDNELLVSVISDSVCLSTWK AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYH TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV QKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADE LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL QPSFMVTHIGGLDAVPETVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE LARLVEETHGIWNEQAEKYLLAQFGVDIGEAAQ" gene complement(2940199..2941587) /gene="cmtA" /locus_tag="b2933" /gene_synonym="ECK2928" /gene_synonym="JW2900" /db_xref="EcoGene:EG11792" CDS complement(2940199..2941587) /gene="cmtA" /locus_tag="b2933" /gene_synonym="ECK2928" /gene_synonym="JW2900" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, mannitol-specific enzyme II component, cryptic; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative mannitol-specific PTS IIB and IIC components" /protein_id="AAC75970.1" /db_xref="GI:1789301" /db_xref="ASAP:ABE-0009621" /db_xref="UniProtKB/Swiss-Prot:P69826" /db_xref="EcoGene:EG11792" /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA GGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI LKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFR KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD TLFNQLTAEHKH" gene complement(2941615..2942058) /gene="cmtB" /locus_tag="b2934" /gene_synonym="ECK2929" /gene_synonym="JW2901" /gene_synonym="tolM" /db_xref="EcoGene:EG11791" CDS complement(2941615..2942058) /gene="cmtB" /locus_tag="b2934" /gene_synonym="ECK2929" /gene_synonym="JW2901" /gene_synonym="tolM" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="PTS system, mannitol-specific enzyme II component, cryptic; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative mannitol-specific enzyme IIA component of PTS" /protein_id="AAC75971.1" /db_xref="GI:1789302" /db_xref="ASAP:ABE-0009623" /db_xref="UniProtKB/Swiss-Prot:P69824" /db_xref="EcoGene:EG11791" /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG" gene complement(2942372..2944363) /gene="tktA" /locus_tag="b2935" /gene_synonym="ECK2930" /gene_synonym="JW5478" /gene_synonym="tkt" /db_xref="EcoGene:EG11427" CDS complement(2942372..2944363) /gene="tktA" /locus_tag="b2935" /gene_synonym="ECK2930" /gene_synonym="JW5478" /gene_synonym="tkt" /EC_number="2.2.1.1" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /experiment="N-terminus verified by Edman degradation: PMID 1537815" /note="transketolase 1 isozyme; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="transketolase 1, thiamine triphosphate-binding" /protein_id="AAT48155.1" /db_xref="GI:48994911" /db_xref="ASAP:ABE-0009625" /db_xref="UniProtKB/Swiss-Prot:P27302" /db_xref="EcoGene:EG11427" /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG LNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL" gene 2944641..2945399 /gene="loiP" /locus_tag="b2936" /gene_synonym="ECK2931" /gene_synonym="JW2903" /gene_synonym="yggG" /db_xref="EcoGene:EG11291" CDS 2944641..2945399 /gene="loiP" /locus_tag="b2936" /gene_synonym="ECK2931" /gene_synonym="JW2903" /gene_synonym="yggG" /function="enzyme; Degradation of proteins, peptides, glycopeptides" /codon_start=1 /transl_table=11 /product="Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; Era-binding heat shock protein" /protein_id="AAC75973.2" /db_xref="GI:87082185" /db_xref="ASAP:ABE-0009629" /db_xref="UniProtKB/Swiss-Prot:P25894" /db_xref="EcoGene:EG11291" /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA GGIVGSLSQSQLGNLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK" repeat_region 2945418..2945564 /note="REP214 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2945605..2946525) /gene="speB" /locus_tag="b2937" /gene_synonym="ECK2932" /gene_synonym="JW2904" /db_xref="EcoGene:EG10960" CDS complement(2945605..2946525) /gene="speB" /locus_tag="b2937" /gene_synonym="ECK2932" /gene_synonym="JW2904" /EC_number="3.5.3.11" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="agmatinase" /protein_id="AAC75974.1" /db_xref="GI:1789306" /db_xref="ASAP:ABE-0009632" /db_xref="UniProtKB/Swiss-Prot:P60651" /db_xref="EcoGene:EG10960" /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA PAYDQSEITALAAATLALEMLYIQAAKKGE" gene complement(2946663..2948639) /gene="speA" /locus_tag="b2938" /gene_synonym="ECK2933" /gene_synonym="JW2905" /db_xref="EcoGene:EG10959" CDS complement(2946663..2948639) /gene="speA" /locus_tag="b2938" /gene_synonym="ECK2933" /gene_synonym="JW2905" /EC_number="4.1.1.19" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="biosynthetic arginine decarboxylase; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="biosynthetic arginine decarboxylase, PLP-binding" /protein_id="AAC75975.1" /db_xref="GI:1789307" /db_xref="ASAP:ABE-0009634" /db_xref="UniProtKB/Swiss-Prot:P21170" /db_xref="EcoGene:EG10959" /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQ LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE" gene complement(2948648..2948779) /gene="yqgB" /locus_tag="b2939" /gene_synonym="ECK2934" /gene_synonym="JW2906" /db_xref="EcoGene:EG13164" CDS complement(2948648..2948779) /gene="yqgB" /locus_tag="b2939" /gene_synonym="ECK2934" /gene_synonym="JW2906" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75976.2" /db_xref="GI:145693178" /db_xref="ASAP:ABE-0009638" /db_xref="UniProtKB/Swiss-Prot:P64567" /db_xref="EcoGene:EG13164" /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII" gene 2948915..2949130 /gene="yqgC" /locus_tag="b2940" /gene_synonym="ECK2935" /gene_synonym="JW2907" /db_xref="EcoGene:EG13165" CDS 2948915..2949130 /gene="yqgC" /locus_tag="b2940" /gene_synonym="ECK2935" /gene_synonym="JW2907" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75977.1" /db_xref="GI:1789309" /db_xref="ASAP:ABE-0009643" /db_xref="UniProtKB/Swiss-Prot:P64570" /db_xref="EcoGene:EG13165" /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV KTNPQAKTLISTRLEVATRKKRRVLFI" gene 2949434..2950588 /gene="metK" /locus_tag="b2942" /gene_synonym="ECK2937" /gene_synonym="JW2909" /gene_synonym="metX" /db_xref="EcoGene:EG10589" CDS 2949434..2950588 /gene="metK" /locus_tag="b2942" /gene_synonym="ECK2937" /gene_synonym="JW2909" /gene_synonym="metX" /EC_number="2.5.1.6" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006556 - S-adenosylmethionine biosynthetic process" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /protein_id="AAC75979.1" /db_xref="GI:1789311" /db_xref="ASAP:ABE-0009650" /db_xref="UniProtKB/Swiss-Prot:P0A817" /db_xref="EcoGene:EG10589" /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT SATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK" repeat_region 2950640..2950665 /note="REP215 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 2951012..2952406 /gene="galP" /locus_tag="b2943" /gene_synonym="ECK2938" /gene_synonym="JW2910" /gene_synonym="Pgal" /db_xref="EcoGene:EG12148" CDS 2951012..2952406 /gene="galP" /locus_tag="b2943" /gene_synonym="ECK2938" /gene_synonym="JW2910" /gene_synonym="Pgal" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="galactose-proton symport of transport system; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="D-galactose transporter" /protein_id="AAC75980.1" /db_xref="GI:1789312" /db_xref="ASAP:ABE-0009654" /db_xref="UniProtKB/Swiss-Prot:P0AEP1" /db_xref="EcoGene:EG12148" /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN LMKGRKLREIGAHD" gene 2952483..2952980 /gene="yggI" /locus_tag="b2944" /gene_synonym="ECK2939" /gene_synonym="JW2911" /gene_synonym="sprT" /db_xref="EcoGene:EG12122" CDS 2952483..2952980 /gene="yggI" /locus_tag="b2944" /gene_synonym="ECK2939" /gene_synonym="JW2911" /gene_synonym="sprT" /codon_start=1 /transl_table=11 /product="Zn-dependent metalloprotease-related protein" /protein_id="AAC75981.1" /db_xref="GI:1789313" /db_xref="ASAP:ABE-0009657" /db_xref="UniProtKB/Swiss-Prot:P39902" /db_xref="EcoGene:EG12122" /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM MENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE QLVAK" gene 2953075..2953782 /gene="endA" /locus_tag="b2945" /gene_synonym="ECK2940" /gene_synonym="JW2912" /db_xref="EcoGene:EG11336" CDS 2953075..2953782 /gene="endA" /locus_tag="b2945" /gene_synonym="ECK2940" /gene_synonym="JW2912" /EC_number="3.1.21.1" /function="enzyme; Degradation of DNA" /note="GO_process: GO:0006308 - DNA catabolic process" /codon_start=1 /transl_table=11 /product="DNA-specific endonuclease I" /protein_id="AAC75982.1" /db_xref="GI:1789314" /db_xref="ASAP:ABE-0009661" /db_xref="UniProtKB/Swiss-Prot:P25736" /db_xref="EcoGene:EG11336" /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV QGNHNPYVQRACQARKS" gene 2953862..2954593 /gene="rsmE" /locus_tag="b2946" /gene_synonym="ECK2941" /gene_synonym="JW2913" /gene_synonym="yggJ" /db_xref="EcoGene:EG12366" CDS 2953862..2954593 /gene="rsmE" /locus_tag="b2946" /gene_synonym="ECK2941" /gene_synonym="JW2913" /gene_synonym="yggJ" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA m(3)U1498 methyltransferase, SAM-dependent" /protein_id="AAC75983.2" /db_xref="GI:87082186" /db_xref="ASAP:ABE-0009665" /db_xref="UniProtKB/Swiss-Prot:P0AGL7" /db_xref="EcoGene:EG12366" /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD GSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG PRVLRTETTALTAITALQVRFGDLG" gene 2954606..2955556 /gene="gshB" /locus_tag="b2947" /gene_synonym="ECK2942" /gene_synonym="gsh-II" /gene_synonym="JW2914" /db_xref="EcoGene:EG10419" CDS 2954606..2955556 /gene="gshB" /locus_tag="b2947" /gene_synonym="ECK2942" /gene_synonym="gsh-II" /gene_synonym="JW2914" /EC_number="6.3.2.3" /function="enzyme; Biosynthesis of cofactors, carriers: Thioredoxin, glutaredoxin, glutathione" /experiment="N-terminus verified by Edman degradation: PMID 6393055" /note="GO_process: GO:0006750 - glutathione biosynthetic process" /codon_start=1 /transl_table=11 /product="glutathione synthetase" /protein_id="AAC75984.1" /db_xref="GI:1789316" /db_xref="ASAP:ABE-0009667" /db_xref="UniProtKB/Swiss-Prot:P04425" /db_xref="EcoGene:EG10419" /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYIL ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ" gene 2955665..2956228 /gene="yqgE" /locus_tag="b2948" /gene_synonym="ECK2943" /gene_synonym="JW2915" /db_xref="EcoGene:EG13289" CDS 2955665..2956228 /gene="yqgE" /locus_tag="b2948" /gene_synonym="ECK2943" /gene_synonym="JW2915" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC75985.2" /db_xref="GI:87082187" /db_xref="ASAP:ABE-0009669" /db_xref="UniProtKB/Swiss-Prot:P0A8W5" /db_xref="EcoGene:EG13289" /translation="MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLE NLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDN TVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKT PIADRWREAAKLIGVDILTMPGVAGHA" gene 2956228..2956644 /gene="yqgF" /locus_tag="b2949" /gene_synonym="ECK2944" /gene_synonym="JW2916" /db_xref="EcoGene:EG13290" CDS 2956228..2956644 /gene="yqgF" /locus_tag="b2949" /gene_synonym="ECK2944" /gene_synonym="JW2916" /codon_start=1 /transl_table=11 /product="putative Holliday junction resolvase" /protein_id="AAC75986.1" /db_xref="GI:1789318" /db_xref="ASAP:ABE-0009672" /db_xref="UniProtKB/Swiss-Prot:P0A8I1" /db_xref="EcoGene:EG13290" /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY" repeat_region 2956694..2956818 /note="REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2956828..2957808) /gene="yggR" /locus_tag="b2950" /gene_synonym="ECK2945" /gene_synonym="JW2917" /db_xref="EcoGene:EG12978" CDS complement(2956828..2957808) /gene="yggR" /locus_tag="b2950" /gene_synonym="ECK2945" /gene_synonym="JW2917" /function="putative transport; Not classified" /note="putative protein transport" /codon_start=1 /transl_table=11 /product="putative PilT family AAA+ ATPase" /protein_id="AAC75987.2" /db_xref="GI:87082188" /db_xref="ASAP:ABE-0009675" /db_xref="UniProtKB/Swiss-Prot:P52052" /db_xref="EcoGene:EG12978" /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDV EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL" gene 2957826..2958530 /gene="yggS" /locus_tag="b2951" /gene_synonym="ECK2946" /gene_synonym="JW2918" /db_xref="EcoGene:EG12979" CDS 2957826..2958530 /gene="yggS" /locus_tag="b2951" /gene_synonym="ECK2946" /gene_synonym="JW2918" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="UPF0001 family protein, PLP-binding" /protein_id="AAC75988.1" /db_xref="GI:1789321" /db_xref="ASAP:ABE-0009681" /db_xref="UniProtKB/Swiss-Prot:P67080" /db_xref="EcoGene:EG12979" /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM VRIGTAIFGARDYSKK" gene 2958548..2959114 /gene="yggT" /locus_tag="b2952" /gene_synonym="ECK2947" /gene_synonym="JW2919" /db_xref="EcoGene:EG12980" CDS 2958548..2959114 /gene="yggT" /locus_tag="b2952" /gene_synonym="ECK2947" /gene_synonym="JW2919" /note="conserved hypothetical integral membrane protein" /codon_start=1 /transl_table=11 /product="putative inner membrane protein; compensates for loss in K+ uptake" /protein_id="AAC75989.1" /db_xref="GI:1789322" /db_xref="ASAP:ABE-0009685" /db_xref="UniProtKB/Swiss-Prot:P64564" /db_xref="EcoGene:EG12980" /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL LLYVINMGVAEVLQATGNMLLPGLWMAL" gene 2959111..2959401 /gene="yggU" /locus_tag="b2953" /gene_synonym="ECK2948" /gene_synonym="JW5479" /db_xref="EcoGene:EG12981" CDS 2959111..2959401 /gene="yggU" /locus_tag="b2953" /gene_synonym="ECK2948" /gene_synonym="JW5479" /codon_start=1 /transl_table=11 /product="UPF0235 family protein" /protein_id="AAC75990.2" /db_xref="GI:87082189" /db_xref="ASAP:ABE-0009690" /db_xref="UniProtKB/Swiss-Prot:P52060" /db_xref="EcoGene:EG12981" /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN" gene 2959409..2960002 /gene="rdgB" /locus_tag="b2954" /gene_synonym="ECK2949" /gene_synonym="JW2921" /gene_synonym="yggV" /db_xref="EcoGene:EG12982" CDS 2959409..2960002 /gene="rdgB" /locus_tag="b2954" /gene_synonym="ECK2949" /gene_synonym="JW2921" /gene_synonym="yggV" /EC_number="3.6.1.-" /function="enzyme; Not classified" /note="putative ribosomal protein" /codon_start=1 /transl_table=11 /product="dITP/XTP pyrophosphatase" /protein_id="AAC75991.1" /db_xref="GI:1789324" /db_xref="ASAP:ABE-0009692" /db_xref="UniProtKB/Swiss-Prot:P52061" /db_xref="EcoGene:EG12982" /translation="MQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL TFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKL LETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG" gene 2959995..2961131 /gene="yggW" /locus_tag="b2955" /gene_synonym="ECK2950" /gene_synonym="JW2922" /db_xref="EcoGene:EG12983" CDS 2959995..2961131 /gene="yggW" /locus_tag="b2955" /gene_synonym="ECK2950" /gene_synonym="JW2922" /function="putative enzyme; Not classified" /note="putative oxidase" /codon_start=1 /transl_table=11 /product="HemN family putative oxidoreductase" /protein_id="AAC75992.1" /db_xref="GI:1789325" /db_xref="ASAP:ABE-0009694" /db_xref="UniProtKB/Swiss-Prot:P52062" /db_xref="EcoGene:EG12983" /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL NDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG RILRTTKTRHPRGFMQGRYLESQRDVEATDKPFEFFMNRFRLLEAAPRVEFIAYTGLC EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE" repeat_region 2961141..2961261 /note="REP217 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2961286..2962293) /gene="yggM" /locus_tag="b2956" /gene_synonym="ECK2951" /gene_synonym="JW2923" /db_xref="EcoGene:EG12704" CDS complement(2961286..2962293) /gene="yggM" /locus_tag="b2956" /gene_synonym="ECK2951" /gene_synonym="JW2923" /function="phenotype; Not classified" /note="putative alpha helix chain" /codon_start=1 /transl_table=11 /product="DUF1202 family putative secreted protein" /protein_id="AAC75993.1" /db_xref="GI:1789326" /db_xref="ASAP:ABE-0009697" /db_xref="UniProtKB/Swiss-Prot:P46142" /db_xref="EcoGene:EG12704" /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM LTSKGTPASGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREDAFKKIHQQRDEFNK QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI K" gene complement(2962410..2963456) /gene="ansB" /locus_tag="b2957" /gene_synonym="ECK2952" /gene_synonym="JW2924" /db_xref="EcoGene:EG10046" CDS complement(2962410..2963456) /gene="ansB" /locus_tag="b2957" /gene_synonym="ECK2952" /gene_synonym="JW2924" /EC_number="3.5.1.1" /function="enzyme; Degradation of small molecules: Amino acids" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="periplasmic L-asparaginase 2" /protein_id="AAC75994.1" /db_xref="GI:1789327" /db_xref="ASAP:ABE-0009700" /db_xref="UniProtKB/Swiss-Prot:P00805" /db_xref="EcoGene:EG10046" /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK SNYTVGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF DTLATAAKTGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ TKDPQQIQQIFNQY" gene complement(2963632..2964351) /gene="yggN" /locus_tag="b2958" /gene_synonym="ecfF" /gene_synonym="ECK2953" /gene_synonym="JW2925" /db_xref="EcoGene:EG12705" CDS complement(2963632..2964351) /gene="yggN" /locus_tag="b2958" /gene_synonym="ecfF" /gene_synonym="ECK2953" /gene_synonym="JW2925" /codon_start=1 /transl_table=11 /product="DUF2884 family putative periplasmic protein" /protein_id="AAC75995.1" /db_xref="GI:1789328" /db_xref="ASAP:ABE-0009706" /db_xref="UniProtKB/Swiss-Prot:P0ADS9" /db_xref="EcoGene:EG12705" /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK DVCSRVVTLEDSRKALVGNLK" repeat_region 2964424..2964502 /note="REP218 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(2964535..2964861) /gene="yggL" /locus_tag="b2959" /gene_synonym="ECK2954" /gene_synonym="JW2926" /db_xref="EcoGene:EG12443" CDS complement(2964535..2964861) /gene="yggL" /locus_tag="b2959" /gene_synonym="ECK2954" /gene_synonym="JW2926" /codon_start=1 /transl_table=11 /product="DUF469 family protein" /protein_id="AAC75996.2" /db_xref="GI:87082190" /db_xref="ASAP:ABE-0009712" /db_xref="UniProtKB/Swiss-Prot:P38521" /db_xref="EcoGene:EG12443" /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL FDVWWD" gene complement(2964861..2965580) /gene="trmI" /locus_tag="b2960" /gene_synonym="ECK2955" /gene_synonym="JW2927" /gene_synonym="trmB?" /gene_synonym="yggH" /db_xref="EcoGene:EG11779" CDS complement(2964861..2965580) /gene="trmI" /locus_tag="b2960" /gene_synonym="ECK2955" /gene_synonym="JW2927" /gene_synonym="trmB?" /gene_synonym="yggH" /EC_number="2.1.1.33" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA m(7)G46 methyltransferase, SAM-dependent" /protein_id="AAC75997.1" /db_xref="GI:1789330" /db_xref="ASAP:ABE-0009714" /db_xref="UniProtKB/Swiss-Prot:P0A8I5" /db_xref="EcoGene:EG11779" /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA CLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK FEQRGHRLGHGVWDLMFERVK" gene 2965741..2966793 /gene="mutY" /locus_tag="b2961" /gene_synonym="ECK2956" /gene_synonym="JW2928" /gene_synonym="micA" /gene_synonym="mutB" /db_xref="EcoGene:EG10627" CDS 2965741..2966793 /gene="mutY" /locus_tag="b2961" /gene_synonym="ECK2956" /gene_synonym="JW2928" /gene_synonym="micA" /gene_synonym="mutB" /EC_number="3.2.2.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="adenine glycosylase; G.C --> T.A transversions; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="adenine DNA glycosylase" /protein_id="AAC75998.1" /db_xref="GI:1789331" /db_xref="ASAP:ABE-0009720" /db_xref="UniProtKB/Swiss-Prot:P17802" /db_xref="EcoGene:EG10627" /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWAL YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA APVERLLQQLRTGAPV" gene 2966821..2967096 /gene="yggX" /locus_tag="b2962" /gene_synonym="ECK2957" /gene_synonym="JW2929" /db_xref="EcoGene:EG12984" CDS 2966821..2967096 /gene="yggX" /locus_tag="b2962" /gene_synonym="ECK2957" /gene_synonym="JW2929" /codon_start=1 /transl_table=11 /product="oxidative damage protective factor for iron-sulfur proteins" /protein_id="AAC75999.1" /db_xref="GI:1789332" /db_xref="ASAP:ABE-0009722" /db_xref="UniProtKB/Swiss-Prot:P0A8P3" /db_xref="EcoGene:EG12984" /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK" gene 2967161..2968240 /gene="mltC" /locus_tag="b2963" /gene_synonym="ECK2958" /gene_synonym="JW5481" /gene_synonym="yggZ" /db_xref="EcoGene:EG12986" CDS 2967161..2968240 /gene="mltC" /locus_tag="b2963" /gene_synonym="ECK2958" /gene_synonym="JW5481" /gene_synonym="yggZ" /EC_number="3.2.1.-" /function="putative enzyme; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase C" /protein_id="AAC76000.2" /db_xref="GI:87082191" /db_xref="ASAP:ABE-0009725" /db_xref="UniProtKB/Swiss-Prot:P0C066" /db_xref="EcoGene:EG12986" /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK NRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT TRHPSAESRRYLYKVNTAQKSYRRR" gene 2968442..2969698 /gene="nupG" /locus_tag="b2964" /gene_synonym="ECK2959" /gene_synonym="JW2932" /db_xref="EcoGene:EG10664" CDS 2968442..2969698 /gene="nupG" /locus_tag="b2964" /gene_synonym="ECK2959" /gene_synonym="JW2932" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="transport of nucleosides, permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015949 - nucleobase, nucleoside and nucleotide interconversion" /codon_start=1 /transl_table=11 /product="nucleoside transporter" /protein_id="AAC76001.2" /db_xref="GI:87082192" /db_xref="ASAP:ABE-0009728" /db_xref="UniProtKB/Swiss-Prot:P0AFF4" /db_xref="EcoGene:EG10664" /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV VLAFAFMAMFKYKHVRVPTGTQTVSH" gene complement(2969748..2971883) /gene="speC" /locus_tag="b2965" /gene_synonym="ECK2960" /gene_synonym="JW5482" /db_xref="EcoGene:EG10961" CDS complement(2969748..2971883) /gene="speC" /locus_tag="b2965" /gene_synonym="ECK2960" /gene_synonym="JW5482" /EC_number="4.1.1.17" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="ornithine decarboxylase isozyme; GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="ornithine decarboxylase, constitutive" /protein_id="AAC76002.2" /db_xref="GI:87082193" /db_xref="ASAP:ABE-0009730" /db_xref="UniProtKB/Swiss-Prot:P21169" /db_xref="EcoGene:EG10961" /translation="MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSR SGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPP FYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGD LLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKS NHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYR LAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNE NDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYP LFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDY PTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVP ATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLVE VLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAH SAYIRGDVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNL LPGFSPELQGVYSETDADGVKRLYGYVLK" gene 2972281..2972988 /gene="yqgA" /locus_tag="b2966" /gene_synonym="ECK2961" /gene_synonym="JW2934" /db_xref="EcoGene:EG12987" CDS 2972281..2972988 /gene="yqgA" /locus_tag="b2966" /gene_synonym="ECK2961" /gene_synonym="JW2934" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="DUF554 family putative inner membrane protein" /protein_id="AAC76003.1" /db_xref="GI:1789338" /db_xref="ASAP:ABE-0009736" /db_xref="UniProtKB/Swiss-Prot:Q46831" /db_xref="EcoGene:EG12987" /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLG IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESF IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP ALLLAMPLSAAWTAWFA" gene 2973094..2973169 /gene="pheV" /locus_tag="b2967" /gene_synonym="ECK2962" /gene_synonym="JWR0068" /gene_synonym="pheC" /db_xref="EcoGene:EG30065" tRNA 2973094..2973169 /gene="pheV" /locus_tag="b2967" /gene_synonym="ECK2962" /gene_synonym="JWR0068" /gene_synonym="pheC" /product="tRNA-Phe" /note="anticodon: GAA" /db_xref="ASAP:ABE-0009738" /db_xref="EcoGene:EG30065" gene complement(2973318..2973854) /gene="yghD" /locus_tag="b2968" /gene_synonym="ecfC" /gene_synonym="ECK2963" /gene_synonym="gspMbeta" /gene_synonym="JW2935" /db_xref="EcoGene:EG12988" CDS complement(2973318..2973854) /gene="yghD" /locus_tag="b2968" /gene_synonym="ecfC" /gene_synonym="ECK2963" /gene_synonym="gspMbeta" /gene_synonym="JW2935" /function="putative transport; Not classified" /note="putative secretion pathway protein" /codon_start=1 /transl_table=11 /product="putative membrane-anchored secretion pathway M-type protein" /protein_id="AAC76004.1" /db_xref="GI:1789339" /db_xref="ASAP:ABE-0009740" /db_xref="UniProtKB/Swiss-Prot:Q46832" /db_xref="EcoGene:EG12988" /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV VFLFSVGYYVLIWQPLSERIEQQETILQQLVAMNTRLKNAAPDIIAARKSATTTPAQV SRVISDSASAHSVVIRRIADRGENIQVWIEPVVFNDLLKWLNALDEKYALRVTQIDVS AAEKPGMVNVQRLEFGRG" gene complement(2973856..2974818) /gene="yghE" /locus_tag="b2969" /gene_synonym="ecfB" /gene_synonym="ECK2964" /gene_synonym="gspLbeta" /gene_synonym="JW5924" /pseudo /db_xref="EcoGene:EG12989" CDS complement(2973856..2974818) /gene="yghE" /locus_tag="b2969" /gene_synonym="ecfB" /gene_synonym="ECK2964" /gene_synonym="gspLbeta" /gene_synonym="JW5924" /note="pseudogene, secretion pathway protein, L-type protein homology; putative general secretion pathway for protein export (GSP)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009742" /db_xref="UniProtKB/Swiss-Prot:Q46833" /db_xref="EcoGene:EG12989" gene complement(2974821..2975669) /gene="yghF" /locus_tag="b2970" /gene_synonym="ecfA" /gene_synonym="ECK2965" /gene_synonym="gspCbeta" /gene_synonym="JW5484" /pseudo /db_xref="EcoGene:EG12990" CDS complement(2974821..2975669) /gene="yghF" /locus_tag="b2970" /gene_synonym="ecfA" /gene_synonym="ECK2965" /gene_synonym="gspCbeta" /gene_synonym="JW5484" /note="pseudogene, secretion pathway protein, C-type protein homology;putative transport; Not classified; putative general secretion pathway for protein export (GSP)" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009745" /db_xref="UniProtKB/Swiss-Prot:Q46834" /db_xref="EcoGene:EG12990" gene complement(2975795..2976205) /gene="yghG" /locus_tag="b2971" /gene_synonym="ECK2966" /gene_synonym="gspSbeta" /gene_synonym="JW2938" /db_xref="EcoGene:EG12991" CDS complement(2975795..2976205) /gene="yghG" /locus_tag="b2971" /gene_synonym="ECK2966" /gene_synonym="gspSbeta" /gene_synonym="JW2938" /codon_start=1 /transl_table=11 /product="secretin (GspDbeta) OM localization lipoprotein pilotin" /protein_id="AAC76007.1" /db_xref="GI:1789342" /db_xref="ASAP:ABE-0009748" /db_xref="UniProtKB/Swiss-Prot:Q46835" /db_xref="EcoGene:EG12991" /translation="MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNIS QNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLM ITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA" gene complement(2976271..2977080) /gene="pppA" /locus_tag="b2972" /gene_synonym="ECK2967" /gene_synonym="JW2939" /gene_synonym="yghH" /db_xref="EcoGene:EG12992" CDS complement(2976271..2977080) /gene="pppA" /locus_tag="b2972" /gene_synonym="ECK2967" /gene_synonym="JW2939" /gene_synonym="yghH" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="bifunctional prepilin leader peptidase/ methylase" /protein_id="AAC76008.2" /db_xref="GI:87082194" /db_xref="ASAP:ABE-0009751" /db_xref="UniProtKB/Swiss-Prot:Q46836" /db_xref="EcoGene:EG12992" /translation="MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMA EFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRY PLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWT GLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGW VGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF" repeat_region 2977106..2977273 /note="REP219 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(2977278..2981840) /gene="sslE" /locus_tag="b4466" /gene_synonym="acfD" /gene_synonym="ECK2968" /gene_synonym="JW5925" /gene_synonym="yghJ" /db_xref="EcoGene:EG12994" CDS complement(2977278..2981840) /gene="sslE" /locus_tag="b4466" /gene_synonym="acfD" /gene_synonym="ECK2968" /gene_synonym="JW5925" /gene_synonym="yghJ" /note="putative lipoprotein" /codon_start=1 /transl_table=11 /product="putative secreted and surface-associated lipoprotein mucinase" /protein_id="AAT48156.1" /db_xref="GI:48994912" /db_xref="ASAP:ABE-0174096" /db_xref="UniProtKB/Swiss-Prot:P0CK95" /db_xref="EcoGene:EG12994" /translation="MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGS LPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRV TGATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQE LAGSDDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKL VNEEVENNAATDKAPSTHTSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSE GRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTI ALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNG ATLGEGEQVVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQ GVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKN YWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGEGKLMVIGN PHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWKPDAKASM TVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFE YVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASG FVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTIDSK TGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKEKI FAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAA DLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNDTSYRYEEGKNDEL GFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYME KPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGL WAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKF KVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESDAFVY TTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRF TNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGAT EVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARGGAGDRLLMYAQLKE WAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCA ESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTL ASLDLPKPEQGPETINQVTEHKMSAE" repeat_region 2982289..2982315 /note="REP220 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(2982325..2984007) /gene="glcA" /locus_tag="b2975" /gene_synonym="ECK2969" /gene_synonym="JW2942" /gene_synonym="yghK" /db_xref="EcoGene:EG12995" CDS complement(2982325..2984007) /gene="glcA" /locus_tag="b2975" /gene_synonym="ECK2969" /gene_synonym="JW2942" /gene_synonym="yghK" /function="putative transport; Not classified" /note="putative permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glycolate transporter" /protein_id="AAC76011.1" /db_xref="GI:1789347" /db_xref="ASAP:ABE-0009763" /db_xref="UniProtKB/Swiss-Prot:Q46839" /db_xref="EcoGene:EG12995" /translation="MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGA ITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDI IRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLC LIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWK GVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTET AISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFA PGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISI FILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMF PFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMIS PQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS" gene complement(2984362..2986533) /gene="glcB" /locus_tag="b2976" /gene_synonym="ECK2970" /gene_synonym="glc" /gene_synonym="JW2943" /db_xref="EcoGene:EG20080" CDS complement(2984362..2986533) /gene="glcB" /locus_tag="b2976" /gene_synonym="ECK2970" /gene_synonym="glc" /gene_synonym="JW2943" /EC_number="2.3.3.9" /function="enzyme; Central intermediary metabolism: Glyoxylate bypass" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009436 - glyoxylate catabolic process" /codon_start=1 /transl_table=11 /product="malate synthase G" /protein_id="AAC76012.1" /db_xref="GI:1789348" /db_xref="ASAP:ABE-0009767" /db_xref="UniProtKB/Swiss-Prot:P37330" /db_xref="EcoGene:EG20080" /translation="MSQTITQSRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVH DLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVET TGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDP QRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVG YRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVA AVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISLHGRSL LFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPK MHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGM WAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFN AEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIH NVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAG NFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKESH" gene complement(2986555..2986959) /gene="glcG" /locus_tag="b2977" /gene_synonym="ECK2971" /gene_synonym="JW2944" /gene_synonym="yghC" /db_xref="EcoGene:EG12952" CDS complement(2986555..2986959) /gene="glcG" /locus_tag="b2977" /gene_synonym="ECK2971" /gene_synonym="JW2944" /gene_synonym="yghC" /codon_start=1 /transl_table=11 /product="DUF336 family protein" /protein_id="AAC76013.1" /db_xref="GI:1789349" /db_xref="ASAP:ABE-0009769" /db_xref="UniProtKB/Swiss-Prot:P0AEQ1" /db_xref="EcoGene:EG12952" /translation="MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLAL SRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVV VDGQIIGAVGVSGLTGAQDAQVAKAAAAVLAK" gene complement(2986964..2988187) /gene="glcF" /locus_tag="b4467" /gene_synonym="ECK2972" /gene_synonym="gox" /gene_synonym="JW5486" /gene_synonym="yghL" /db_xref="EcoGene:EG13291" CDS complement(2986964..2988187) /gene="glcF" /locus_tag="b4467" /gene_synonym="ECK2972" /gene_synonym="gox" /gene_synonym="JW5486" /gene_synonym="yghL" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /codon_start=1 /transl_table=11 /product="glycolate oxidase 4Fe-4S iron-sulfur cluster subunit" /protein_id="AAT48157.1" /db_xref="GI:48994913" /db_xref="ASAP:ABE-0174097" /db_xref="UniProtKB/Swiss-Prot:P52074" /db_xref="EcoGene:EG13291" /translation="MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDE LDGPRGRIYLIKQVLEGNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIV EQKVKRPLPERILREGLRQVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKP RPPLRHKRRVLMLEGCAQPTLSPNTNAATARVLDRLGISVMPANEAGCCGAVDYHLNA QEKGLARARNNIDAWWPAIEAGAEAILQTASGCGAFVKEYGQMLKNDALYADKARQVS ELAVDLVELLREEPLEKLAIRGDKKLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDV PDSHLCCGSAGTYALTHPDLARQLRDNKMNALESGKPEMIVTANIGCQTHLASAGRTS VRHWIEIVEQALEKE" gene complement(2988198..2989250) /gene="glcE" /locus_tag="b4468" /gene_synonym="ECK2973" /gene_synonym="gox" /gene_synonym="JW5487" /gene_synonym="yghL" /db_xref="EcoGene:EG12996" CDS complement(2988198..2989250) /gene="glcE" /locus_tag="b4468" /gene_synonym="ECK2973" /gene_synonym="gox" /gene_synonym="JW5487" /gene_synonym="yghL" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="glycolate oxidase iron-sulfur subunit" /codon_start=1 /transl_table=11 /product="glycolate oxidase FAD binding subunit" /protein_id="AAT48158.1" /db_xref="GI:48994914" /db_xref="ASAP:ABE-0174098" /db_xref="UniProtKB/Swiss-Prot:P52073" /db_xref="EcoGene:EG12996" /translation="MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQT LDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQMLPCEPPHYGEEATWGGMV ACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMVGSYGCL GVLTEISMKVLPRPRASLSLRREISLQEAMSEIAEWQLQPLPISGLCYFDNALWIRLE GGEGSVKAARELLGGEEVAGQFWQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQ LIDWGGALRWLKSTAEDNQIHRIARNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQ LDPCGVFNPGRMYAEL" gene complement(2989250..2990749) /gene="glcD" /locus_tag="b2979" /gene_synonym="ECK2974" /gene_synonym="gox" /gene_synonym="JW2946" /gene_synonym="yghM" /db_xref="EcoGene:EG12997" CDS complement(2989250..2990749) /gene="glcD" /locus_tag="b2979" /gene_synonym="ECK2974" /gene_synonym="gox" /gene_synonym="JW2946" /gene_synonym="yghM" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="glycolate oxidase subunit D; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glycolate oxidase subunit, FAD-linked" /protein_id="AAC76015.1" /db_xref="GI:1789351" /db_xref="ASAP:ABE-0009773" /db_xref="UniProtKB/Swiss-Prot:P0AEP9" /db_xref="EcoGene:EG12997" /translation="MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPY ECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGV LLVMARFKEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLG VTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAE DFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFW AGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNM HPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEI TTFHAVKAAFDPDGLLNPGKNIPTLHRCAEFGAMHVHHGHLPFPELERF" gene 2991000..2991764 /gene="glcC" /locus_tag="b2980" /gene_synonym="ECK2975" /gene_synonym="JW2947" /gene_synonym="yghN" /db_xref="EcoGene:EG12998" CDS 2991000..2991764 /gene="glcC" /locus_tag="b2980" /gene_synonym="ECK2975" /gene_synonym="JW2947" /gene_synonym="yghN" /function="regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional activator for glc operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="glycolate-inducible glc operon transcriptional repressor; autorepressor" /protein_id="AAC76016.1" /db_xref="GI:1789353" /db_xref="ASAP:ABE-0009777" /db_xref="UniProtKB/Swiss-Prot:P0ACL5" /db_xref="EcoGene:EG12998" /translation="MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFS RSALREGLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRA LLEGESARLAATLGTQADFVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQA SHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQ RAARDHVRTVKKNLHDIELEGHHLIRSAVPLEMNLS" gene complement(2991771..2992871) /gene="yghO" /locus_tag="b2981" /gene_synonym="ECK2976" /gene_synonym="JW5848" /pseudo /db_xref="EcoGene:EG12999" CDS complement(2991771..2992871) /gene="yghO" /locus_tag="b2981" /gene_synonym="ECK2976" /gene_synonym="JW5848" /note="pseudogene, IS-interrupted" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009779" /db_xref="UniProtKB/Swiss-Prot:Q46840" /db_xref="EcoGene:EG12999" mobile_element 2992874..2994068 /mobile_element_type="insertion sequence:IS5LO" gene 2992906..2993922 /gene="insH1" /locus_tag="b2982" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS 2992906..2993922 /gene="insH1" /locus_tag="b2982" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC76018.1" /db_xref="GI:1789355" /db_xref="ASAP:ABE-0009783" /db_xref="UniProtKB/Swiss-Prot:P0CE56" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene complement(2994069..2995136) /gene="yghQ" /locus_tag="b2983" /gene_synonym="ECK2977" /gene_synonym="JW5490" /db_xref="EcoGene:EG13001" CDS complement(2994069..2995136) /gene="yghQ" /locus_tag="b2983" /gene_synonym="ECK2977" /gene_synonym="JW5490" /codon_start=1 /transl_table=11 /product="putative inner membrane polysaccharide flippase" /protein_id="AAT48159.1" /db_xref="GI:48994915" /db_xref="ASAP:ABE-0009786" /db_xref="UniProtKB/Swiss-Prot:Q46841" /db_xref="EcoGene:EG13001" /translation="MAGFNIKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAG KGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFS LDIVSGAVAIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDR FDLIAVQQATKPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRR NIHNAFKLNLFESARYIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFK IAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLI VGKPLISLVFGVKYLEAYDLI" gene complement(2995182..2995940) /gene="yghR" /locus_tag="b2984" /gene_synonym="ECK2978" /gene_synonym="JW2952" /db_xref="EcoGene:EG13002" CDS complement(2995182..2995940) /gene="yghR" /locus_tag="b2984" /gene_synonym="ECK2978" /gene_synonym="JW2952" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="AAC76020.1" /db_xref="GI:1789357" /db_xref="ASAP:ABE-0009789" /db_xref="UniProtKB/Swiss-Prot:P64572" /db_xref="EcoGene:EG13002" /translation="MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKS LQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAV IMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF LAQRERRLYQQMAQYRPELIIRLGIDIETAISRKPDHDYAELQDKIGVMSKIGYNGTK ILEIDSRAPYSEVLEQAQKAVSLVAIVSDRRSLT" gene complement(2995972..2996685) /gene="yghS" /locus_tag="b2985" /gene_synonym="ECK2979" /gene_synonym="JW5491" /db_xref="EcoGene:EG13003" CDS complement(2995972..2996685) /gene="yghS" /locus_tag="b2985" /gene_synonym="ECK2979" /gene_synonym="JW5491" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="AAC76021.1" /db_xref="GI:1789358" /db_xref="ASAP:ABE-0009793" /db_xref="UniProtKB/Swiss-Prot:Q46843" /db_xref="EcoGene:EG13003" /translation="MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPT EHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSC WRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGR HPADEILQASLRAIHAALS" gene 2996859..2997551 /gene="yghT" /locus_tag="b2986" /gene_synonym="ECK2980" /gene_synonym="JW2954" /db_xref="EcoGene:EG13004" CDS 2996859..2997551 /gene="yghT" /locus_tag="b2986" /gene_synonym="ECK2980" /gene_synonym="JW2954" /codon_start=1 /transl_table=11 /product="putative ATP-binding protein" /protein_id="AAC76022.1" /db_xref="GI:1789359" /db_xref="ASAP:ABE-0009798" /db_xref="UniProtKB/Swiss-Prot:Q46844" /db_xref="EcoGene:EG13004" /translation="MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQ AGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLA CRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDL VIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEK AITDFMTARGYH" gene complement(2997600..2999099) /gene="pitB" /locus_tag="b2987" /gene_synonym="ECK2981" /gene_synonym="JW2955" /db_xref="EcoGene:EG12883" CDS complement(2997600..2999099) /gene="pitB" /locus_tag="b2987" /gene_synonym="ECK2981" /gene_synonym="JW2955" /function="transport; Transport of small molecules: Anions" /note="low-affinity phosphate transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006793 - phosphorus metabolic process" /codon_start=1 /transl_table=11 /product="phosphate transporter" /protein_id="AAC76023.1" /db_xref="GI:1789360" /db_xref="ASAP:ABE-0009800" /db_xref="UniProtKB/Swiss-Prot:P43676" /db_xref="EcoGene:EG12883" /translation="MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIY TRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLL AAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLI VSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSA AGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQ HPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSV SQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVAL ALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVL SSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI" gene complement(2999391..3001250) /gene="gss" /locus_tag="b2988" /gene_synonym="ECK2982" /gene_synonym="gsp" /gene_synonym="JW2956" /db_xref="EcoGene:EG12882" CDS complement(2999391..3001250) /gene="gss" /locus_tag="b2988" /gene_synonym="ECK2982" /gene_synonym="gsp" /gene_synonym="JW2956" /EC_number="3.5.1.78" /EC_number="6.3.1.8" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="glutathionylspermidine synthetase/amidase; GO_process: GO:0006596 - polyamine biosynthetic process" /codon_start=1 /transl_table=11 /product="glutathionylspermidine amidase and glutathionylspermidine synthetase" /protein_id="AAC76024.1" /db_xref="GI:1789361" /db_xref="ASAP:ABE-0009804" /db_xref="UniProtKB/Swiss-Prot:P0AES0" /db_xref="EcoGene:EG12882" /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK" gene 3001455..3002321 /gene="yghU" /locus_tag="b2989" /gene_synonym="ECK2983" /gene_synonym="JW5492" /db_xref="EcoGene:EG13005" CDS 3001455..3002321 /gene="yghU" /locus_tag="b2989" /gene_synonym="ECK2983" /gene_synonym="JW5492" /codon_start=1 /transl_table=11 /product="putative S-transferase" /protein_id="AAC76025.2" /db_xref="GI:87082195" /db_xref="ASAP:ABE-0009812" /db_xref="UniProtKB/Swiss-Prot:Q46845" /db_xref="EcoGene:EG13005" /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP ALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS DFETNTEDKRQG" repeat_region 3002349..3002431 /note="REP221 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3002444..3002692) /gene="hybG" /locus_tag="b2990" /gene_synonym="ECK2984" /gene_synonym="JW2958" /db_xref="EcoGene:EG11805" CDS complement(3002444..3002692) /gene="hybG" /locus_tag="b2990" /gene_synonym="ECK2984" /gene_synonym="JW2958" /function="phenotype; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="hydrogenase 2 accessory protein" /protein_id="AAC76026.1" /db_xref="GI:1789364" /db_xref="ASAP:ABE-0009816" /db_xref="UniProtKB/Swiss-Prot:P0AAM7" /db_xref="EcoGene:EG11805" /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA" gene complement(3002705..3003046) /gene="hybF" /locus_tag="b2991" /gene_synonym="ECK2985" /gene_synonym="JW5493" /db_xref="EcoGene:EG11804" CDS complement(3002705..3003046) /gene="hybF" /locus_tag="b2991" /gene_synonym="ECK2985" /gene_synonym="JW5493" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="may modulate levels of hydrogenease-2; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="protein involved with the maturation of hydrogenases 1 and 2" /protein_id="AAC76027.1" /db_xref="GI:1789365" /db_xref="ASAP:ABE-0009818" /db_xref="UniProtKB/Swiss-Prot:P0A703" /db_xref="EcoGene:EG11804" /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG DSLIVKSIEVE" gene complement(3003039..3003527) /gene="hybE" /locus_tag="b2992" /gene_synonym="ECK2986" /gene_synonym="JW2960" /db_xref="EcoGene:EG11803" CDS complement(3003039..3003527) /gene="hybE" /locus_tag="b2992" /gene_synonym="ECK2986" /gene_synonym="JW2960" /function="phenotype; Energy metabolism, carbon: Anaerobic respiration" /note="member of hyb operon" /codon_start=1 /transl_table=11 /product="hydrogenase 2-specific chaperone" /protein_id="AAC76028.1" /db_xref="GI:1789366" /db_xref="ASAP:ABE-0009824" /db_xref="UniProtKB/Swiss-Prot:P0AAN1" /db_xref="EcoGene:EG11803" /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE NA" gene complement(3003520..3004014) /gene="hybD" /locus_tag="b2993" /gene_synonym="ECK2987" /gene_synonym="JW2961" /db_xref="EcoGene:EG11802" CDS complement(3003520..3004014) /gene="hybD" /locus_tag="b2993" /gene_synonym="ECK2987" /gene_synonym="JW2961" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="probable processing element for hydrogenase-2; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="maturation protease for hydrogenase 2" /protein_id="AAC76029.1" /db_xref="GI:1789367" /db_xref="ASAP:ABE-0009826" /db_xref="UniProtKB/Swiss-Prot:P37182" /db_xref="EcoGene:EG11802" /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA GMELLGDMANRDHLIIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLS ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE AIHD" gene complement(3004014..3005717) /gene="hybC" /locus_tag="b2994" /gene_synonym="ECK2988" /gene_synonym="JW2962" /db_xref="EcoGene:EG11801" CDS complement(3004014..3005717) /gene="hybC" /locus_tag="b2994" /gene_synonym="ECK2988" /gene_synonym="JW2962" /EC_number="1.12.99.6" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="probable large subunit, hydrogenase-2; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="hydrogenase 2, large subunit" /protein_id="AAC76030.1" /db_xref="GI:1789368" /db_xref="ASAP:ABE-0009828" /db_xref="UniProtKB/Swiss-Prot:P0ACE0" /db_xref="EcoGene:EG11801" /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV L" gene complement(3005714..3006892) /gene="hybB" /locus_tag="b2995" /gene_synonym="ECK2989" /gene_synonym="JW5494" /db_xref="EcoGene:EG11800" CDS complement(3005714..3006892) /gene="hybB" /locus_tag="b2995" /gene_synonym="ECK2989" /gene_synonym="JW5494" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="probable cytochrome Ni/Fe component of hydrogenase-2; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0017004 - cytochrome complex assembly" /codon_start=1 /transl_table=11 /product="putative hydrogenase 2 cytochrome b type component" /protein_id="AAC76031.1" /db_xref="GI:2367183" /db_xref="ASAP:ABE-0009830" /db_xref="UniProtKB/Swiss-Prot:P37180" /db_xref="EcoGene:EG11800" /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK VSLQRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL VAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA " gene complement(3006882..3007868) /gene="hybA" /locus_tag="b2996" /gene_synonym="ECK2990" /gene_synonym="hydL" /gene_synonym="JW2964" /db_xref="EcoGene:EG11799" CDS complement(3006882..3007868) /gene="hybA" /locus_tag="b2996" /gene_synonym="ECK2990" /gene_synonym="hydL" /gene_synonym="JW2964" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="hydrogenase-2 small subunit" /codon_start=1 /transl_table=11 /product="hydrogenase 2 4Fe-4S ferredoxin-type component" /protein_id="AAC76032.1" /db_xref="GI:1789370" /db_xref="ASAP:ABE-0009832" /db_xref="UniProtKB/Swiss-Prot:P0AAJ8" /db_xref="EcoGene:EG11799" /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES" gene complement(3007871..3008989) /gene="hybO" /locus_tag="b2997" /gene_synonym="ECK2991" /gene_synonym="JW2965" /gene_synonym="yghV" /db_xref="EcoGene:EG13006" CDS complement(3007871..3008989) /gene="hybO" /locus_tag="b2997" /gene_synonym="ECK2991" /gene_synonym="JW2965" /gene_synonym="yghV" /EC_number="1.12.99.6" /function="putative enzyme; Not classified" /note="GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="hydrogenase 2, small subunit" /protein_id="AAC76033.1" /db_xref="GI:1789371" /db_xref="ASAP:ABE-0009834" /db_xref="UniProtKB/Swiss-Prot:P69741" /db_xref="EcoGene:EG13006" /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE" gene complement(3009178..3009465) /gene="yghW" /locus_tag="b2998" /gene_synonym="ECK2992" /gene_synonym="JW2966" /db_xref="EcoGene:EG13007" CDS complement(3009178..3009465) /gene="yghW" /locus_tag="b2998" /gene_synonym="ECK2992" /gene_synonym="JW2966" /codon_start=1 /transl_table=11 /product="DUF2623 family protein" /protein_id="AAC76034.1" /db_xref="GI:1789372" /db_xref="ASAP:ABE-0009839" /db_xref="UniProtKB/Swiss-Prot:P64574" /db_xref="EcoGene:EG13007" /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN" gene complement(3009584..3010419) /gene="yghX" /locus_tag="b4658" /gene_synonym="ECK2993" /gene_synonym="JW5926" /gene_synonym="yghY" /pseudo /db_xref="EcoGene:EG13008" CDS complement(join(3009584..3010000,3010000..3010419)) /gene="yghX" /locus_tag="b4658" /gene_synonym="ECK2993" /gene_synonym="JW5926" /gene_synonym="yghY" /note="pseudogene, dienlactone hydrolase family" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0009842" /db_xref="ASAP:ABE-0009844" /db_xref="UniProtKB/Swiss-Prot:Q7DFU6" /db_xref="EcoGene:EG13008" gene 3010625..3011665 /gene="gpr" /locus_tag="b3001" /gene_synonym="ECK2995" /gene_synonym="JW2970" /gene_synonym="mgrA" /gene_synonym="yghZ" /db_xref="EcoGene:EG13010" CDS 3010625..3011665 /gene="gpr" /locus_tag="b3001" /gene_synonym="ECK2995" /gene_synonym="JW2970" /gene_synonym="mgrA" /gene_synonym="yghZ" /note="putative reductase; GO_function: GO:0005244 - voltage-gated ion channel activity" /codon_start=1 /transl_table=11 /product="L-glyceraldehyde 3-phosphate reductase" /protein_id="AAC76037.1" /db_xref="GI:1789375" /db_xref="ASAP:ABE-0009848" /db_xref="UniProtKB/Swiss-Prot:Q46851" /db_xref="EcoGene:EG13010" /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG KALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ RGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIAD GELNLWQASSDK" gene complement(3011705..3012199) /gene="yqhA" /locus_tag="b3002" /gene_synonym="ECK2996" /gene_synonym="JW2971" /db_xref="EcoGene:EG13011" CDS complement(3011705..3012199) /gene="yqhA" /locus_tag="b3002" /gene_synonym="ECK2996" /gene_synonym="JW2971" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="UPF0114 family putative inner membrane protein" /protein_id="AAC76038.1" /db_xref="GI:1789376" /db_xref="ASAP:ABE-0009850" /db_xref="UniProtKB/Swiss-Prot:P67244" /db_xref="EcoGene:EG13011" /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT RHNH" gene 3012390..3013274 /gene="yghA" /locus_tag="b3003" /gene_synonym="ECK2997" /gene_synonym="JW2972" /db_xref="EcoGene:EG11292" CDS 3012390..3013274 /gene="yghA" /locus_tag="b3003" /gene_synonym="ECK2997" /gene_synonym="JW2972" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC76039.1" /db_xref="GI:1789378" /db_xref="ASAP:ABE-0009859" /db_xref="UniProtKB/Swiss-Prot:P0AG84" /db_xref="EcoGene:EG11292" /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE SSYVTAEVHGVCGGEHLG" repeat_region 3013282..3013536 /note="RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites" gene complement(3013546..3013971) /gene="exbD" /locus_tag="b3005" /gene_synonym="ECK2998" /gene_synonym="JW2973" /db_xref="EcoGene:EG10272" CDS complement(3013546..3013971) /gene="exbD" /locus_tag="b3005" /gene_synonym="ECK2998" /gene_synonym="JW2973" /function="transport; Transport of small molecules: Cations" /note="uptake of enterochelin; tonB-dependent uptake of B colicins; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TonB-ExbB-ExbD complex" /protein_id="AAC76041.1" /db_xref="GI:1789380" /db_xref="ASAP:ABE-0009866" /db_xref="UniProtKB/Swiss-Prot:P0ABV2" /db_xref="EcoGene:EG10272" /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK" gene complement(3013978..3014712) /gene="exbB" /locus_tag="b3006" /gene_synonym="ECK2999" /gene_synonym="JW2974" /db_xref="EcoGene:EG10271" CDS complement(3013978..3014712) /gene="exbB" /locus_tag="b3006" /gene_synonym="ECK2999" /gene_synonym="JW2974" /function="transport; Transport of small molecules: Cations" /note="uptake of enterochelin; tonB-dependent uptake of B colicins; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="membrane spanning protein in TonB-ExbB-ExbD complex" /protein_id="AAC76042.1" /db_xref="GI:1789381" /db_xref="ASAP:ABE-0009869" /db_xref="UniProtKB/Swiss-Prot:P0ABU7" /db_xref="EcoGene:EG10271" /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSD DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL LQSRDLDLEASAAAHPVRVAQKLRAG" gene 3014964..3016151 /gene="metC" /locus_tag="b3008" /gene_synonym="ECK3000" /gene_synonym="JW2975" /db_xref="EcoGene:EG10583" CDS 3014964..3016151 /gene="metC" /locus_tag="b3008" /gene_synonym="ECK3000" /gene_synonym="JW2975" /EC_number="4.4.1.8" /function="enzyme; Amino acid biosynthesis: Methionine" /note="cystathionine beta-lyase (beta-cystathionase); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009086 - methionine biosynthetic process" /codon_start=1 /transl_table=11 /product="cystathionine beta-lyase, PLP-dependent" /protein_id="AAC76044.1" /db_xref="GI:1789383" /db_xref="ASAP:ABE-0009878" /db_xref="UniProtKB/Swiss-Prot:P06721" /db_xref="EcoGene:EG10583" /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKH ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGD HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLF SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA RIV" gene 3016291..3016950 /gene="yghB" /locus_tag="b3009" /gene_synonym="ECK3001" /gene_synonym="JW2976" /db_xref="EcoGene:EG11824" CDS 3016291..3016950 /gene="yghB" /locus_tag="b3009" /gene_synonym="ECK3001" /gene_synonym="JW2976" /function="membrane; inner membrane; cell division" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter" /protein_id="AAC76045.1" /db_xref="GI:1789384" /db_xref="ASAP:ABE-0009882" /db_xref="UniProtKB/Swiss-Prot:P0AA60" /db_xref="EcoGene:EG11824" /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCN A" gene complement(3016990..3017946) /gene="yqhC" /locus_tag="b3010" /gene_synonym="ECK3002" /gene_synonym="JW5849" /db_xref="EcoGene:EG13013" CDS complement(3016990..3017946) /gene="yqhC" /locus_tag="b3010" /gene_synonym="ECK3002" /gene_synonym="JW5849" /function="regulator; Not classified" /note="putative ARAC-type regulatory protein; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of yqhD" /protein_id="AAC76046.2" /db_xref="GI:87082197" /db_xref="ASAP:ABE-0009884" /db_xref="UniProtKB/Swiss-Prot:Q46855" /db_xref="EcoGene:EG13013" /translation="MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLS GLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKR IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM KASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN" gene 3018083..3019246 /gene="yqhD" /locus_tag="b3011" /gene_synonym="ECK3003" /gene_synonym="JW2978" /db_xref="EcoGene:EG13014" CDS 3018083..3019246 /gene="yqhD" /locus_tag="b3011" /gene_synonym="ECK3003" /gene_synonym="JW2978" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="aldehyde reductase, NADPH-dependent" /protein_id="AAC76047.1" /db_xref="GI:1789386" /db_xref="ASAP:ABE-0009888" /db_xref="UniProtKB/Swiss-Prot:Q46856" /db_xref="EcoGene:EG13014" /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK FIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR" gene 3019351..3020178 /gene="dkgA" /locus_tag="b3012" /gene_synonym="ECK3004" /gene_synonym="JW5499" /gene_synonym="yqhE" /db_xref="EcoGene:EG13015" CDS 3019351..3020178 /gene="dkgA" /locus_tag="b3012" /gene_synonym="ECK3004" /gene_synonym="JW5499" /gene_synonym="yqhE" /EC_number="1.1.1.274" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconate reductase A" /protein_id="AAC76048.2" /db_xref="GI:87082198" /db_xref="ASAP:ABE-0009892" /db_xref="UniProtKB/Swiss-Prot:Q46857" /db_xref="EcoGene:EG13015" /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRS IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG" gene 3020378..3021304 /gene="yqhG" /locus_tag="b3013" /gene_synonym="ECK3005" /gene_synonym="JW5500" /gene_synonym="yqhF" /db_xref="EcoGene:EG13017" CDS 3020378..3021304 /gene="yqhG" /locus_tag="b3013" /gene_synonym="ECK3005" /gene_synonym="JW5500" /gene_synonym="yqhF" /codon_start=1 /transl_table=11 /product="DUF3828 family putative periplasmic protein" /protein_id="AAT48160.1" /db_xref="GI:48994916" /db_xref="ASAP:ABE-0009895" /db_xref="UniProtKB/Swiss-Prot:Q46858" /db_xref="EcoGene:EG13017" /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYQNYKSDATAPY FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ" gene 3021355..3021612 /gene="yqhH" /locus_tag="b3014" /gene_synonym="ECK3006" /gene_synonym="JW2982" /db_xref="EcoGene:EG13018" CDS 3021355..3021612 /gene="yqhH" /locus_tag="b3014" /gene_synonym="ECK3006" /gene_synonym="JW2982" /note="GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein, Lpp paralog" /protein_id="AAC76050.1" /db_xref="GI:1789390" /db_xref="ASAP:ABE-0009898" /db_xref="UniProtKB/Swiss-Prot:P65298" /db_xref="EcoGene:EG13018" /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE" gene complement(3021655..3023874) /gene="ygiQ" /locus_tag="b4469" /gene_synonym="ECK3007" /gene_synonym="JW5501" /gene_synonym="ygiR" /db_xref="EcoGene:EG13019" CDS complement(3021655..3023874) /gene="ygiQ" /locus_tag="b4469" /gene_synonym="ECK3007" /gene_synonym="JW5501" /gene_synonym="ygiR" /codon_start=1 /transl_table=11 /product="Radical SAM superfamily protein" /protein_id="AAT48161.1" /db_xref="GI:48994917" /db_xref="ASAP:ABE-0174099" /db_xref="UniProtKB/Swiss-Prot:Q46861" /db_xref="EcoGene:EG13019" /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR" gene complement(3023985..3025397) /gene="ftsP" /locus_tag="b3017" /gene_synonym="ECK3008" /gene_synonym="JW2985" /gene_synonym="sufI" /gene_synonym="sui" /gene_synonym="ygiJ" /db_xref="EcoGene:EG11376" CDS complement(3023985..3025397) /gene="ftsP" /locus_tag="b3017" /gene_synonym="ECK3008" /gene_synonym="JW2985" /gene_synonym="sufI" /gene_synonym="sui" /gene_synonym="ygiJ" /function="phenotype; Not classified" /note="suppressor of ftsI" /codon_start=1 /transl_table=11 /product="septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts)" /protein_id="AAC76053.1" /db_xref="GI:1789394" /db_xref="ASAP:ABE-0009905" /db_xref="UniProtKB/Swiss-Prot:P26648" /db_xref="EcoGene:EG11376" /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ SPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPG ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS QTLEMADRGSIGQLLVNPVP" gene complement(3025472..3026209) /gene="plsC" /locus_tag="b3018" /gene_synonym="ECK3009" /gene_synonym="JW2986" /gene_synonym="parF" /db_xref="EcoGene:EG11377" CDS complement(3025472..3026209) /gene="plsC" /locus_tag="b3018" /gene_synonym="ECK3009" /gene_synonym="JW2986" /gene_synonym="parF" /EC_number="2.3.1.51" /function="enzyme; Macromolecule synthesis, modification: Phospholipids" /experiment="N-terminus verified by Edman degradation: PMID 1557036" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0008654 - phospholipid biosynthetic process" /codon_start=1 /transl_table=11 /product="1-acyl-sn-glycerol-3-phosphate acyltransferase" /protein_id="AAC76054.1" /db_xref="GI:1789395" /db_xref="ASAP:ABE-0009910" /db_xref="UniProtKB/Swiss-Prot:P26647" /db_xref="EcoGene:EG11377" /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR LAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA AHCRSIMEQKIAELDKEVAEREAAGKV" repeat_region 3026372..3026401 /note="REP223 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3026443..3028701) /gene="parC" /locus_tag="b3019" /gene_synonym="ECK3010" /gene_synonym="JW2987" /db_xref="EcoGene:EG10686" CDS complement(3026443..3028701) /gene="parC" /locus_tag="b3019" /gene_synonym="ECK3010" /gene_synonym="JW2987" /EC_number="5.99.1.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA topoisomerase IV subunit A; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV, subunit A" /protein_id="AAC76055.1" /db_xref="GI:1789396" /db_xref="ASAP:ABE-0009916" /db_xref="UniProtKB/Swiss-Prot:P0AFI2" /db_xref="EcoGene:EG10686" /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI LASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID SPRRASSGDSEE" gene complement(3028839..3030446) /gene="ygiS" /locus_tag="b3020" /gene_synonym="ECK3011" /gene_synonym="JW2988" /db_xref="EcoGene:EG13021" CDS complement(3028839..3030446) /gene="ygiS" /locus_tag="b3020" /gene_synonym="ECK3011" /gene_synonym="JW2988" /function="putative transport; Not classified" /note="putative transport periplasmic protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="putative ABC transporter permease" /protein_id="AAC76056.1" /db_xref="GI:1789397" /db_xref="ASAP:ABE-0009920" /db_xref="UniProtKB/Swiss-Prot:Q46863" /db_xref="EcoGene:EG13021" /translation="MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPG TLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQ WSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKAT DDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWV VNEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIE KSLPGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATT LTPPEVKGFSATTFDELQKPMSERVAMAKALLKQAGYDASHPLRFELFYNKYDLHEKT AIALSSEWKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTLKS DSEENVGHWKNAQYDALLNQATQITDATKRNALYQQAEVIINQQAPLIPIYYQPLIKL LKPYVGGFPLHNPQDYVYSKELYIKAH" gene complement(3030579..3030974) /gene="mqsA" /locus_tag="b3021" /gene_synonym="ECK3012" /gene_synonym="JW2989" /gene_synonym="ygiT" /db_xref="EcoGene:EG13022" CDS complement(3030579..3030974) /gene="mqsA" /locus_tag="b3021" /gene_synonym="ECK3012" /gene_synonym="JW2989" /gene_synonym="ygiT" /codon_start=1 /transl_table=11 /product="antitoxin for MqsR toxin; transcriptional repressor" /protein_id="AAC76057.1" /db_xref="GI:1789398" /db_xref="ASAP:ABE-0009923" /db_xref="UniProtKB/Swiss-Prot:Q46864" /db_xref="EcoGene:EG13022" /translation="MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESI MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY EKGNAQPHPSTIKLLRVLDKHPELLNEIR" gene complement(3030976..3031272) /gene="mqsR" /locus_tag="b3022" /gene_synonym="ECK3013" /gene_synonym="JW2990" /gene_synonym="ygiU" /db_xref="EcoGene:EG13023" CDS complement(3030976..3031272) /gene="mqsR" /locus_tag="b3022" /gene_synonym="ECK3013" /gene_synonym="JW2990" /gene_synonym="ygiU" /codon_start=1 /transl_table=11 /product="GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor" /protein_id="AAC76058.1" /db_xref="GI:1789399" /db_xref="ASAP:ABE-0009925" /db_xref="UniProtKB/Swiss-Prot:Q46865" /db_xref="EcoGene:EG13023" /translation="MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCN VIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQVYLKITVIHDVLIVSFKEK" gene complement(3031477..3031959) /gene="ygiV" /locus_tag="b3023" /gene_synonym="ECK3014" /gene_synonym="JW5502" /db_xref="EcoGene:EG13024" CDS complement(3031477..3031959) /gene="ygiV" /locus_tag="b3023" /gene_synonym="ECK3014" /gene_synonym="JW5502" /codon_start=1 /transl_table=11 /product="transcriptional repressor for mcbR biofilm gene" /protein_id="AAT48162.1" /db_xref="GI:48994918" /db_xref="ASAP:ABE-0009928" /db_xref="UniProtKB/Swiss-Prot:Q46866" /db_xref="EcoGene:EG13024" /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET GLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA " gene complement(3032012..3032404) /gene="ygiW" /locus_tag="b3024" /gene_synonym="ECK3015" /gene_synonym="JW2992" /db_xref="EcoGene:EG13025" CDS complement(3032012..3032404) /gene="ygiW" /locus_tag="b3024" /gene_synonym="ECK3015" /gene_synonym="JW2992" /codon_start=1 /transl_table=11 /product="hydrogen peroxide and cadmium resistance periplasmic protein; stress-induced OB-fold protein" /protein_id="AAC76060.1" /db_xref="GI:1789401" /db_xref="ASAP:ABE-0009930" /db_xref="UniProtKB/Swiss-Prot:P0ADU5" /db_xref="EcoGene:EG13025" /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK DTVEIQGEVDKDWNSVEIDVKQIRKVNP" gene 3032556..3033215 /gene="qseB" /locus_tag="b3025" /gene_synonym="ECK3016" /gene_synonym="JW2993" /gene_synonym="preA" /gene_synonym="ygiX" /db_xref="EcoGene:EG13026" CDS 3032556..3033215 /gene="qseB" /locus_tag="b3025" /gene_synonym="ECK3016" /gene_synonym="JW2993" /gene_synonym="preA" /gene_synonym="ygiX" /note="putative 2-component transcriptional regulator; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="quorum sensing DNA-binding response regulator in two-component regulatory system with QseC" /protein_id="AAC76061.1" /db_xref="GI:1789402" /db_xref="ASAP:ABE-0009936" /db_xref="UniProtKB/Swiss-Prot:P52076" /db_xref="EcoGene:EG13026" /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL LMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE K" gene 3033212..3034561 /gene="qseC" /locus_tag="b3026" /gene_synonym="ECK3017" /gene_synonym="JW2994" /gene_synonym="preB" /gene_synonym="ygiY" /db_xref="EcoGene:EG13027" CDS 3033212..3034561 /gene="qseC" /locus_tag="b3026" /gene_synonym="ECK3017" /gene_synonym="JW2994" /gene_synonym="preB" /gene_synonym="ygiY" /note="putative 2-component sensor protein; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="quorum sensing sensory histidine kinase in two-component regulatory system with QseB" /protein_id="AAC76062.1" /db_xref="GI:1789403" /db_xref="ASAP:ABE-0009938" /db_xref="UniProtKB/Swiss-Prot:P40719" /db_xref="EcoGene:EG13027" /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF DTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDG DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID VRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV TPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW" gene complement(3034607..3034939) /gene="ygiZ" /locus_tag="b3027" /gene_synonym="ECK3018" /gene_synonym="JW2995" /db_xref="EcoGene:EG13028" CDS complement(3034607..3034939) /gene="ygiZ" /locus_tag="b3027" /gene_synonym="ECK3018" /gene_synonym="JW2995" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC76063.1" /db_xref="GI:1789404" /db_xref="ASAP:ABE-0009940" /db_xref="UniProtKB/Swiss-Prot:Q46867" /db_xref="EcoGene:EG13028" /translation="MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICS IPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLF WGRFIFCY" gene 3035258..3035839 /gene="mdaB" /locus_tag="b3028" /gene_synonym="ECK3019" /gene_synonym="JW2996" /gene_synonym="mda66" /db_xref="EcoGene:EG12656" CDS 3035258..3035839 /gene="mdaB" /locus_tag="b3028" /gene_synonym="ECK3019" /gene_synonym="JW2996" /gene_synonym="mda66" /EC_number="1.6.5.10" /function="phenotype; Not classified" /note="modulator of drug activity B; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="NADPH quinone reductase" /protein_id="AAC76064.1" /db_xref="GI:1789406" /db_xref="ASAP:ABE-0009946" /db_xref="UniProtKB/Swiss-Prot:P0AEY5" /db_xref="EcoGene:EG12656" /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG" gene 3035870..3036184 /gene="ygiN" /locus_tag="b3029" /gene_synonym="ECK3020" /gene_synonym="JW2997" /db_xref="EcoGene:EG12657" CDS 3035870..3036184 /gene="ygiN" /locus_tag="b3029" /gene_synonym="ECK3020" /gene_synonym="JW2997" /experiment="N-terminus verified by Edman degradation: PMID 9298646,9600841,9740056,9868784" /codon_start=1 /transl_table=11 /product="quinol monooxygenase" /protein_id="AAC76065.1" /db_xref="GI:1789407" /db_xref="ASAP:ABE-0009948" /db_xref="UniProtKB/Swiss-Prot:P0ADU2" /db_xref="EcoGene:EG12657" /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP GI" gene complement(3036232..3038124) /gene="parE" /locus_tag="b3030" /gene_synonym="ECK3021" /gene_synonym="JW2998" /gene_synonym="nfxD" /db_xref="EcoGene:EG10687" CDS complement(3036232..3038124) /gene="parE" /locus_tag="b3030" /gene_synonym="ECK3021" /gene_synonym="JW2998" /gene_synonym="nfxD" /EC_number="5.99.1.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA topoisomerase IV subunit B; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV, subunit B" /protein_id="AAC76066.1" /db_xref="GI:1789408" /db_xref="ASAP:ABE-0009950" /db_xref="UniProtKB/Swiss-Prot:P20083" /db_xref="EcoGene:EG10687" /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRN TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD MAEIEV" gene complement(3038153..3038734) /gene="yqiA" /locus_tag="b3031" /gene_synonym="ECK3022" /gene_synonym="JW2999" /gene_synonym="yzzI" /db_xref="EcoGene:EG12186" CDS complement(3038153..3038734) /gene="yqiA" /locus_tag="b3031" /gene_synonym="ECK3022" /gene_synonym="JW2999" /gene_synonym="yzzI" /codon_start=1 /transl_table=11 /product="acyl CoA esterase" /protein_id="AAC76067.1" /db_xref="GI:1789409" /db_xref="ASAP:ABE-0009953" /db_xref="UniProtKB/Swiss-Prot:P0A8Z7" /db_xref="EcoGene:EG12186" /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL" gene complement(3038734..3039561) /gene="cpdA" /locus_tag="b3032" /gene_synonym="ECK3023" /gene_synonym="icc" /gene_synonym="JW3000" /db_xref="EcoGene:EG12187" CDS complement(3038734..3039561) /gene="cpdA" /locus_tag="b3032" /gene_synonym="ECK3023" /gene_synonym="icc" /gene_synonym="JW3000" /EC_number="3.1.4.17" /function="regulator; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 8810311" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0008233 - peptidase activity; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="3',5' cAMP phosphodiesterase" /protein_id="AAC76068.1" /db_xref="GI:1789410" /db_xref="ASAP:ABE-0009957" /db_xref="UniProtKB/Swiss-Prot:P0AEW4" /db_xref="EcoGene:EG12187" /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY" gene complement(3039586..3040008) /gene="yqiB" /locus_tag="b3033" /gene_synonym="ECK3024" /gene_synonym="JW3001" /gene_synonym="yzzH" /db_xref="EcoGene:EG12185" CDS complement(3039586..3040008) /gene="yqiB" /locus_tag="b3033" /gene_synonym="ECK3024" /gene_synonym="JW3001" /gene_synonym="yzzH" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="DUF1249 protein YqiB" /protein_id="AAC76069.1" /db_xref="GI:1789411" /db_xref="ASAP:ABE-0009959" /db_xref="UniProtKB/Swiss-Prot:P0ADU7" /db_xref="EcoGene:EG12185" /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY" gene complement(3040009..3040638) /gene="nudF" /locus_tag="b3034" /gene_synonym="adpP" /gene_synonym="aspP" /gene_synonym="ECK3025" /gene_synonym="JW3002" /gene_synonym="rdsA" /gene_synonym="trgB" /gene_synonym="yqiE" /gene_synonym="yzzG" /db_xref="EcoGene:EG12184" CDS complement(3040009..3040638) /gene="nudF" /locus_tag="b3034" /gene_synonym="adpP" /gene_synonym="aspP" /gene_synonym="ECK3025" /gene_synonym="JW3002" /gene_synonym="rdsA" /gene_synonym="trgB" /gene_synonym="yqiE" /gene_synonym="yzzG" /EC_number="3.6.1.13" /experiment="N-terminus verified by Edman degradation: PMID 11416161,11997136" /codon_start=1 /transl_table=11 /product="ADP-ribose pyrophosphatase" /protein_id="AAC76070.1" /db_xref="GI:1789412" /db_xref="ASAP:ABE-0009961" /db_xref="UniProtKB/Swiss-Prot:Q93K97" /db_xref="EcoGene:EG12184" /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQ MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA" gene 3040843..3042324 /gene="tolC" /locus_tag="b3035" /gene_synonym="colE1-i" /gene_synonym="ECK3026" /gene_synonym="JW5503" /gene_synonym="mtcB" /gene_synonym="mukA" /gene_synonym="refI" /gene_synonym="toc" /gene_synonym="weeA" /db_xref="EcoGene:EG11009" CDS 3040843..3042324 /gene="tolC" /locus_tag="b3035" /gene_synonym="colE1-i" /gene_synonym="ECK3026" /gene_synonym="JW5503" /gene_synonym="mtcB" /gene_synonym="mukA" /gene_synonym="refI" /gene_synonym="toc" /gene_synonym="weeA" /function="putative membrane; Cell division" /note="outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="transport channel" /protein_id="AAC76071.2" /db_xref="GI:87082199" /db_xref="ASAP:ABE-0009965" /db_xref="UniProtKB/Swiss-Prot:P02930" /db_xref="EcoGene:EG11009" /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA SEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN" gene 3042472..3043143 /gene="ygiB" /locus_tag="b3037" /gene_synonym="ECK3028" /gene_synonym="JW5927" /db_xref="EcoGene:EG11164" CDS 3042472..3043143 /gene="ygiB" /locus_tag="b3037" /gene_synonym="ECK3028" /gene_synonym="JW5927" /codon_start=1 /transl_table=11 /product="DUF1190 family protein" /protein_id="AAC76073.3" /db_xref="GI:145693179" /db_xref="ASAP:ABE-0009969" /db_xref="UniProtKB/Swiss-Prot:P0ADT2" /db_xref="EcoGene:EG11164" /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETV SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS RSMGG" gene 3043149..3044309 /gene="ygiC" /locus_tag="b3038" /gene_synonym="ECK3029" /gene_synonym="JW3006" /db_xref="EcoGene:EG11165" CDS 3043149..3044309 /gene="ygiC" /locus_tag="b3038" /gene_synonym="ECK3029" /gene_synonym="JW3006" /function="putative enzyme; Not classified" /note="putative synthetase/amidase" /codon_start=1 /transl_table=11 /product="ATP-Grasp family ATPase" /protein_id="AAC76074.1" /db_xref="GI:1789416" /db_xref="ASAP:ABE-0009971" /db_xref="UniProtKB/Swiss-Prot:P0ADT5" /db_xref="EcoGene:EG11165" /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQ VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE" repeat_region 3044318..3044341 /note="REP224 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3044347..3045135) /gene="ygiD" /locus_tag="b3039" /gene_synonym="ECK3030" /gene_synonym="JW3007" /db_xref="EcoGene:EG11166" CDS complement(3044347..3045135) /gene="ygiD" /locus_tag="b3039" /gene_synonym="ECK3030" /gene_synonym="JW3007" /codon_start=1 /transl_table=11 /product="4,5- DOPA-extradiol-dioxygenase" /protein_id="AAC76075.2" /db_xref="GI:226510974" /db_xref="ASAP:ABE-0009973" /db_xref="UniProtKB/Swiss-Prot:P24197" /db_xref="EcoGene:EG11166" /translation="MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVV VSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVT LDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIML VASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTL SNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG" gene 3045278..3046051 /gene="zupT" /locus_tag="b3040" /gene_synonym="ECK3031" /gene_synonym="JW3008" /gene_synonym="ygiE" /db_xref="EcoGene:EG11167" CDS 3045278..3046051 /gene="zupT" /locus_tag="b3040" /gene_synonym="ECK3031" /gene_synonym="JW3008" /gene_synonym="ygiE" /codon_start=1 /transl_table=11 /product="zinc transporter" /protein_id="AAC76076.1" /db_xref="GI:1789419" /db_xref="ASAP:ABE-0009977" /db_xref="UniProtKB/Swiss-Prot:P0A8H3" /db_xref="EcoGene:EG11167" /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM LLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVD ELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG" gene complement(3046541..3047194) /gene="ribB" /locus_tag="b3041" /gene_synonym="ECK3032" /gene_synonym="htrP" /gene_synonym="JW3009" /gene_synonym="luxH" /db_xref="EcoGene:EG10465" CDS complement(3046541..3047194) /gene="ribB" /locus_tag="b3041" /gene_synonym="ECK3032" /gene_synonym="htrP" /gene_synonym="JW3009" /gene_synonym="luxH" /EC_number="4.1.99.12" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /experiment="N-terminus verified by Edman degradation: PMID 1597419" /note="3,4 dihydroxy-2-butanone-4-phosphate synthase" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone-4-phosphate synthase" /protein_id="AAC76077.1" /db_xref="GI:1789420" /db_xref="ASAP:ABE-0009980" /db_xref="UniProtKB/Swiss-Prot:P0A7J0" /db_xref="EcoGene:EG10465" /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS" gene 3047568..3047858 /gene="yqiC" /locus_tag="b3042" /gene_synonym="ECK3033" /gene_synonym="JW5505" /db_xref="EcoGene:EG13031" CDS 3047568..3047858 /gene="yqiC" /locus_tag="b3042" /gene_synonym="ECK3033" /gene_synonym="JW5505" /experiment="N-terminus verified by Edman degradation: PMID 9868784" /codon_start=1 /transl_table=11 /product="BMFP family putative fusogenic protein" /protein_id="AAC76078.2" /db_xref="GI:87082201" /db_xref="ASAP:ABE-0009987" /db_xref="UniProtKB/Swiss-Prot:Q46868" /db_xref="EcoGene:EG13031" /translation="MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRL DLVSREEFDVQTQVLLRTREKLALLEQRISELENRSTEIKKQPDPETLPPTL" gene 3048142..3048693 /gene="ygiL" /locus_tag="b3043" /gene_synonym="ECK3034" /gene_synonym="JW3011" /db_xref="EcoGene:EG12363" CDS 3048142..3048693 /gene="ygiL" /locus_tag="b3043" /gene_synonym="ECK3034" /gene_synonym="JW3011" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC76079.1" /db_xref="GI:1789422" /db_xref="ASAP:ABE-0009992" /db_xref="UniProtKB/Swiss-Prot:P39834" /db_xref="EcoGene:EG12363" /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTM TGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARM ESPSKDATPGNVYAQADYKIAYE" gene join(3048789..3048818,3050155..3052593) /gene="yqiG" /locus_tag="b3046" /gene_synonym="ECK3035" /gene_synonym="JW5507" /pseudo /db_xref="EcoGene:EG14228" CDS join(3048789..3048818,3050155..3052593) /gene="yqiG" /locus_tag="b3046" /gene_synonym="ECK3035" /gene_synonym="JW5507" /note="pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0010001" /db_xref="UniProtKB/Swiss-Prot:P76655" /db_xref="EcoGene:EG14228" mobile_element 3048824..3050154 /mobile_element_type="insertion sequence:IS2I" gene 3048915..3049280 /gene="insC1" /locus_tag="b3044" /gene_synonym="ECK0357" /db_xref="EcoGene:EG40003" CDS 3048915..3049280 /gene="insC1" /locus_tag="b3044" /gene_synonym="ECK0357" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 repressor TnpA" /protein_id="AAC76080.3" /db_xref="GI:145693180" /db_xref="ASAP:ABE-0009997" /db_xref="UniProtKB/Swiss-Prot:P0CF44" /db_xref="EcoGene:EG40003" /translation="MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAAS QLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVE YGRAKKWIAHAPLLPGDGE" gene 3049238..3050143 /gene="insD1" /locus_tag="b3045" /gene_synonym="ECK0358" /db_xref="EcoGene:EG40004" CDS 3049238..3050143 /gene="insD1" /locus_tag="b3045" /gene_synonym="ECK0358" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS2 transposase TnpB" /protein_id="AAC76081.1" /db_xref="GI:1789424" /db_xref="ASAP:ABE-0009999" /db_xref="UniProtKB/Swiss-Prot:P0CF57" /db_xref="EcoGene:EG40004" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene 3052609..3053358 /gene="yqiH" /locus_tag="b3047" /gene_synonym="ECK3036" /gene_synonym="JW5508" /db_xref="EcoGene:EG14229" CDS 3052609..3053358 /gene="yqiH" /locus_tag="b3047" /gene_synonym="ECK3036" /gene_synonym="JW5508" /function="putative factor; Surface structures" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC76083.2" /db_xref="GI:87082203" /db_xref="ASAP:ABE-0010003" /db_xref="UniProtKB/Swiss-Prot:P77616" /db_xref="EcoGene:EG14229" /translation="MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEA LKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQL PKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSYANTQFKNVPSTFQVG YINDFGGLSFYEINCPVVNNICNISVANRDQ" gene 3053360..3054424 /gene="yqiI" /locus_tag="b3048" /gene_synonym="ECK3037" /gene_synonym="JW5509" /db_xref="EcoGene:EG14230" CDS 3053360..3054424 /gene="yqiI" /locus_tag="b3048" /gene_synonym="ECK3037" /gene_synonym="JW5509" /function="structural component; Surface structures" /codon_start=1 /transl_table=11 /product="fimbrial protein" /protein_id="AAC76084.1" /db_xref="GI:1789427" /db_xref="ASAP:ABE-0010005" /db_xref="UniProtKB/Swiss-Prot:P76656" /db_xref="EcoGene:EG14230" /translation="MRYLLIVITFFMGFSSLPAWAMDCYAEHEGGNTVVIGYVPRISI PSDGKKGDKIWQSSEYFMNVFCNNALPGPSPGEEYPSAWANIMMLLASGQDFYNQNSY TFGVTYNGVDYDSTSPLPIAAPVCIDIKGAGTFGNGYKKPAVCSGGPEPQLSVTFPVR VQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLD CFVNVDLEPADGVVDFGKINSRTIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTT DILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAPSVTAPFRAELSANP AETVVEGPFSKDVILKITYN" gene complement(3054467..3054667) /gene="glgS" /locus_tag="b3049" /gene_synonym="ECK3038" /gene_synonym="JW3021" /gene_synonym="scoR" /db_xref="EcoGene:EG11381" CDS complement(3054467..3054667) /gene="glgS" /locus_tag="b3049" /gene_synonym="ECK3038" /gene_synonym="JW3021" /gene_synonym="scoR" /function="putative enzyme; Macromolecule synthesis, modification: Polysaccharides - (cytoplasmic)" /note="glycogen biosynthesis, rpoS dependent; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0000271 - polysaccharide biosynthetic process" /codon_start=1 /transl_table=11 /product="motility and biofilm regulator" /protein_id="AAC76085.1" /db_xref="GI:1789428" /db_xref="ASAP:ABE-0010007" /db_xref="UniProtKB/Swiss-Prot:P26649" /db_xref="EcoGene:EG11381" /translation="MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTW FCARYAWYCQQMMQARELELEH" gene 3054936..3055565 /gene="yqiJ" /locus_tag="b3050" /gene_synonym="ECK3039" /gene_synonym="JW3022" /db_xref="EcoGene:EG14231" CDS 3054936..3055565 /gene="yqiJ" /locus_tag="b3050" /gene_synonym="ECK3039" /gene_synonym="JW3022" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="DUF1449 family inner membrane protein" /protein_id="AAC76086.1" /db_xref="GI:1789429" /db_xref="ASAP:ABE-0010011" /db_xref="UniProtKB/Swiss-Prot:P76657" /db_xref="EcoGene:EG14231" /translation="MILFADYNTPYLFAISFVLLIGLLEIFALICGHMLSGALDAHLD HYDSITTGHISQALHYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLF VVPVSLLFTIIAVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGK LTDQFGQIHYLLLEPEEGKIFTKGDKVLIICRLSATRYLAENNPWPQIL" gene 3055592..3057253 /gene="yqiK" /locus_tag="b3051" /gene_synonym="ECK3040" /gene_synonym="JW3023" /db_xref="EcoGene:EG14232" CDS 3055592..3057253 /gene="yqiK" /locus_tag="b3051" /gene_synonym="ECK3040" /gene_synonym="JW3023" /function="putative membrane; Not classified" /note="putative membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="PHB family membrane protein, function unknown" /protein_id="AAC76087.1" /db_xref="GI:1789430" /db_xref="ASAP:ABE-0010013" /db_xref="UniProtKB/Swiss-Prot:P77306" /db_xref="EcoGene:EG14232" /translation="MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVR TGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFF VRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRR ERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEA ERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKS IAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETK AVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLK FKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQAL SAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE" gene complement(3057451..3057593) /gene="sibD" /locus_tag="b4447" /gene_synonym="C0730" /gene_synonym="ECK3041" /gene_synonym="IS156" /gene_synonym="JWR0251" /gene_synonym="QUAD1d" /gene_synonym="rygD" /gene_synonym="tp8" /db_xref="EcoGene:EG31160" ncRNA complement(3057451..3057593) /ncRNA_class="antisense_RNA" /gene="sibD" /locus_tag="b4447" /gene_synonym="C0730" /gene_synonym="ECK3041" /gene_synonym="IS156" /gene_synonym="JWR0251" /gene_synonym="QUAD1d" /gene_synonym="rygD" /gene_synonym="tp8" /product="sRNA antisense regulator of toxic IbsD protein" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047267" /db_xref="EcoGene:EG31160" gene 3057494..3057553 /gene="ibsD" /locus_tag="b4664" /gene_synonym="ECK4479" /db_xref="EcoGene:EG14469" CDS 3057494..3057553 /gene="ibsD" /locus_tag="b4664" /gene_synonym="ECK4479" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO60008.1" /db_xref="GI:226510975" /db_xref="UniProtKB/Swiss-Prot:C1P616" /db_xref="EcoGene:EG14469" /translation="MMKLVIILIVLLLVSFAAY" gene complement(3057827..3057968) /gene="sibE" /locus_tag="b4611" /gene_synonym="ECK4420" /gene_synonym="QUAD1e" /gene_synonym="rygE" /db_xref="EcoGene:EG31169" ncRNA complement(3057827..3057968) /ncRNA_class="antisense_RNA" /gene="sibE" /locus_tag="b4611" /gene_synonym="ECK4420" /gene_synonym="QUAD1e" /gene_synonym="rygE" /product="sRNA antisense regulator of toxic IbsE protein" /db_xref="EcoGene:EG31169" gene 3057869..3057928 /gene="ibsE" /locus_tag="b4666" /gene_synonym="ECK4481" /db_xref="EcoGene:EG14471" CDS 3057869..3057928 /gene="ibsE" /locus_tag="b4666" /gene_synonym="ECK4481" /codon_start=1 /transl_table=11 /product="toxic membrane protein" /protein_id="ACO60009.1" /db_xref="GI:226510976" /db_xref="UniProtKB/Swiss-Prot:C1P617" /db_xref="EcoGene:EG14471" /translation="MMKLVIILVVLLLLSFPTY" gene complement(3058048..3059481) /gene="hldE" /locus_tag="b3052" /gene_synonym="ECK3042" /gene_synonym="gmhC" /gene_synonym="JW3024" /gene_synonym="rfaE" /gene_synonym="waaE" /gene_synonym="yqiF" /db_xref="EcoGene:EG13416" CDS complement(3058048..3059481) /gene="hldE" /locus_tag="b3052" /gene_synonym="ECK3042" /gene_synonym="gmhC" /gene_synonym="JW3024" /gene_synonym="rfaE" /gene_synonym="waaE" /gene_synonym="yqiF" /EC_number="2.7.1.-" /EC_number="2.7.7.-" /function="putative enzyme; Not classified" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009244 - lipopolysaccharide core region biosynthetic process" /codon_start=1 /transl_table=11 /product="heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase" /protein_id="AAC76088.1" /db_xref="GI:1789432" /db_xref="ASAP:ABE-0010015" /db_xref="UniProtKB/Swiss-Prot:P76658" /db_xref="EcoGene:EG13416" /translation="MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG GEVLVLNFEDGCSTTNIIKKIQQDKKG" gene complement(3059529..3062369) /gene="glnE" /locus_tag="b3053" /gene_synonym="ECK3043" /gene_synonym="JW3025" /db_xref="EcoGene:EG11602" CDS complement(3059529..3062369) /gene="glnE" /locus_tag="b3053" /gene_synonym="ECK3043" /gene_synonym="JW3025" /EC_number="2.7.7.42" /function="enzyme; Proteins - translation and modification" /note="adenylylating enzyme for glutamine synthetase; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="fused deadenylyltransferase/adenylyltransferase for glutamine synthetase" /protein_id="AAC76089.1" /db_xref="GI:1789433" /db_xref="ASAP:ABE-0010018" /db_xref="UniProtKB/Swiss-Prot:P30870" /db_xref="EcoGene:EG11602" /translation="MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKSVLTFSDFVQD SVIAHPEWLTELESQPPQADEWQHYAAWLQEALCNVSDEAGLMRELRLFRRRIMVRIA WAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ LIRGGREPSLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNEREGRG FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFS TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ LTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEGGITDIE FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL ALQELPGHVSEDCFTAERELVRASWQKWLVEE" gene complement(3062392..3063693) /gene="ygiF" /locus_tag="b3054" /gene_synonym="ECK3044" /gene_synonym="JW3026" /db_xref="EcoGene:EG11603" CDS complement(3062392..3063693) /gene="ygiF" /locus_tag="b3054" /gene_synonym="ECK3044" /gene_synonym="JW3026" /codon_start=1 /transl_table=11 /product="inorganic triphosphatase" /protein_id="AAC76090.1" /db_xref="GI:1789434" /db_xref="ASAP:ABE-0010020" /db_xref="UniProtKB/Swiss-Prot:P30871" /db_xref="EcoGene:EG11603" /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV WPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELE LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKA STHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKI SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ AWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR" gene 3063935..3064555 /gene="ygiM" /locus_tag="b3055" /gene_synonym="ecfG" /gene_synonym="ECK3045" /gene_synonym="htrG" /gene_synonym="JW3027" /db_xref="EcoGene:EG12434" CDS 3063935..3064555 /gene="ygiM" /locus_tag="b3055" /gene_synonym="ecfG" /gene_synonym="ECK3045" /gene_synonym="htrG" /gene_synonym="JW3027" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="SH3 domain protein" /protein_id="AAC76091.1" /db_xref="GI:1789435" /db_xref="ASAP:ABE-0010028" /db_xref="UniProtKB/Swiss-Prot:P0ADT8" /db_xref="EcoGene:EG12434" /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN" gene 3064619..3065857 /gene="cca" /locus_tag="b3056" /gene_synonym="ECK3046" /gene_synonym="JW3028" /db_xref="EcoGene:EG10136" CDS 3064619..3065857 /gene="cca" /locus_tag="b3056" /gene_synonym="ECK3046" /gene_synonym="JW3028" /EC_number="2.7.7.72" /EC_number="3.1.4.16" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="tRNA nucleotidyl transferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase" /protein_id="AAC76092.1" /db_xref="GI:1789436" /db_xref="ASAP:ABE-0010031" /db_xref="UniProtKB/Swiss-Prot:P06961" /db_xref="EcoGene:EG10136" /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALM REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL TRRRIAAVASWKEQRCPKPE" repeat_region 3065872..3065996 /note="REP225 (repetitive extragenic palindromic) element; contains 3 REP sequences" gene complement(3066038..3066859) /gene="bacA" /locus_tag="b3057" /gene_synonym="ECK3047" /gene_synonym="JW3029" /gene_synonym="uppP" /db_xref="EcoGene:EG11665" CDS complement(3066038..3066859) /gene="bacA" /locus_tag="b3057" /gene_synonym="ECK3047" /gene_synonym="JW3029" /gene_synonym="uppP" /EC_number="3.6.1.27" /function="putative transport; Drug/analog sensitivity" /note="bacitracin resistance; possibly phosphorylates undecaprenol; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate phosphatase" /protein_id="AAC76093.1" /db_xref="GI:1789437" /db_xref="ASAP:ABE-0010034" /db_xref="UniProtKB/Swiss-Prot:P60932" /db_xref="EcoGene:EG11665" /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF LTSGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF" gene complement(3066949..3067317) /gene="folB" /locus_tag="b3058" /gene_synonym="ECK3048" /gene_synonym="JW3030" /gene_synonym="ygiG" /db_xref="EcoGene:EG11673" CDS complement(3066949..3067317) /gene="folB" /locus_tag="b3058" /gene_synonym="ECK3048" /gene_synonym="JW3030" /gene_synonym="ygiG" /EC_number="4.1.2.25" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 8809757" /note="putative kinase; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase" /protein_id="AAC76094.2" /db_xref="GI:87082204" /db_xref="ASAP:ABE-0010036" /db_xref="UniProtKB/Swiss-Prot:P0AC16" /db_xref="EcoGene:EG11673" /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV ARAANVGVIIERGNNLKENN" gene 3067422..3068039 /gene="plsY" /locus_tag="b3059" /gene_synonym="ECK3049" /gene_synonym="JW3031" /gene_synonym="ygiH" /db_xref="EcoGene:EG11674" CDS 3067422..3068039 /gene="plsY" /locus_tag="b3059" /gene_synonym="ECK3049" /gene_synonym="JW3031" /gene_synonym="ygiH" /codon_start=1 /transl_table=11 /product="putative glycerol-3-phosphate acyltransferase" /protein_id="AAC76095.1" /db_xref="GI:1789439" /db_xref="ASAP:ABE-0010042" /db_xref="UniProtKB/Swiss-Prot:P60782" /db_xref="EcoGene:EG11674" /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE" gene complement(3068052..3068984) /gene="ttdR" /locus_tag="b3060" /gene_synonym="dan" /gene_synonym="ECK3050" /gene_synonym="JW3032" /gene_synonym="ygiP" /db_xref="EcoGene:EG12694" CDS complement(3068052..3068984) /gene="ttdR" /locus_tag="b3060" /gene_synonym="dan" /gene_synonym="ECK3050" /gene_synonym="JW3032" /gene_synonym="ygiP" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional activator of ttdABT" /protein_id="AAC76096.1" /db_xref="GI:1789440" /db_xref="ASAP:ABE-0010045" /db_xref="UniProtKB/Swiss-Prot:P45463" /db_xref="EcoGene:EG12694" /translation="MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQIL ENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGC SFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAH LLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVK VSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYR EPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM" gene 3069191..3070102 /gene="ttdA" /locus_tag="b3061" /gene_synonym="ECK3051" /gene_synonym="JW3033" /gene_synonym="ygjA" /db_xref="EcoGene:EG11168" CDS 3069191..3070102 /gene="ttdA" /locus_tag="b3061" /gene_synonym="ECK3051" /gene_synonym="JW3033" /gene_synonym="ygjA" /EC_number="4.2.1.32" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="L-tartrate dehydratase, subunit A; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="L-tartrate dehydratase, alpha subunit" /protein_id="AAC76097.1" /db_xref="GI:1789442" /db_xref="ASAP:ABE-0010050" /db_xref="UniProtKB/Swiss-Prot:P05847" /db_xref="EcoGene:EG11168" /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG CWAHRRGTLLVHADLTFENLSHTRSAL" gene 3070099..3070703 /gene="ttdB" /locus_tag="b3062" /gene_synonym="ECK3052" /gene_synonym="JW3034" /gene_synonym="ygjB" /db_xref="EcoGene:EG11169" CDS 3070099..3070703 /gene="ttdB" /locus_tag="b3062" /gene_synonym="ECK3052" /gene_synonym="JW3034" /gene_synonym="ygjB" /EC_number="4.2.1.32" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="L-tartrate dehydratase, subunit B; GO_process: GO:0006113 - fermentation" /codon_start=1 /transl_table=11 /product="L-tartrate dehydratase, beta subunit" /protein_id="AAC76098.1" /db_xref="GI:1789443" /db_xref="ASAP:ABE-0010052" /db_xref="UniProtKB/Swiss-Prot:P0AC35" /db_xref="EcoGene:EG11169" /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEF GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK" gene 3070751..3072214 /gene="ttdT" /locus_tag="b3063" /gene_synonym="ECK3053" /gene_synonym="JW3035" /gene_synonym="ygjC" /gene_synonym="ygjE" /db_xref="EcoGene:EG12393" CDS 3070751..3072214 /gene="ttdT" /locus_tag="b3063" /gene_synonym="ECK3053" /gene_synonym="JW3035" /gene_synonym="ygjC" /gene_synonym="ygjE" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="L-tartrate/succinate antiporte" /protein_id="AAC76099.1" /db_xref="GI:1789444" /db_xref="ASAP:ABE-0010056" /db_xref="UniProtKB/Swiss-Prot:P39414" /db_xref="EcoGene:EG12393" /translation="MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVI VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSV IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL" repeat_region 3072226..3072245 /note="REP226 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3072257..3073270) /gene="tsaD" /locus_tag="b3064" /gene_synonym="ECK3054" /gene_synonym="gcp" /gene_synonym="JW3036" /gene_synonym="ygjD" /db_xref="EcoGene:EG11171" CDS complement(3072257..3073270) /gene="tsaD" /locus_tag="b3064" /gene_synonym="ECK3054" /gene_synonym="gcp" /gene_synonym="JW3036" /gene_synonym="ygjD" /function="enzyme; tRNA modification" /note="putative O-sialoglycoprotein endopeptidase" /codon_start=1 /transl_table=11 /product="tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein" /protein_id="AAC76100.1" /db_xref="GI:1789445" /db_xref="ASAP:ABE-0010058" /db_xref="UniProtKB/Swiss-Prot:P05852" /db_xref="EcoGene:EG11171" /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW DVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL PAA" gene 3073508..3073723 /gene="rpsU" /locus_tag="b3065" /gene_synonym="ECK3055" /gene_synonym="JW3037" /db_xref="EcoGene:EG10920" CDS 3073508..3073723 /gene="rpsU" /locus_tag="b3065" /gene_synonym="ECK3055" /gene_synonym="JW3037" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S21" /protein_id="AAC76101.1" /db_xref="GI:1789446" /db_xref="ASAP:ABE-0010063" /db_xref="UniProtKB/Swiss-Prot:P68679" /db_xref="EcoGene:EG10920" /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE RKRAKASAVKRHAKKLARENARRTRLY" gene 3073834..3075579 /gene="dnaG" /locus_tag="b3066" /gene_synonym="dnaP" /gene_synonym="ECK3056" /gene_synonym="JW3038" /gene_synonym="parB" /gene_synonym="sdgA" /db_xref="EcoGene:EG10239" CDS 3073834..3075579 /gene="dnaG" /locus_tag="b3066" /gene_synonym="dnaP" /gene_synonym="ECK3056" /gene_synonym="JW3038" /gene_synonym="parB" /gene_synonym="sdgA" /EC_number="2.7.7.-" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA biosynthesis; DNA primase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="AAC76102.1" /db_xref="GI:1789447" /db_xref="ASAP:ABE-0010065" /db_xref="UniProtKB/Swiss-Prot:P0ABS5" /db_xref="EcoGene:EG10239" /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE ERLELWTLNQELAKK" gene 3075774..3077615 /gene="rpoD" /locus_tag="b3067" /gene_synonym="alt" /gene_synonym="ECK3057" /gene_synonym="JW3039" /db_xref="EcoGene:EG10896" CDS 3075774..3077615 /gene="rpoD" /locus_tag="b3067" /gene_synonym="alt" /gene_synonym="ECK3057" /gene_synonym="JW3039" /function="factor; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 1095419" /note="RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 70 (sigma D) factor" /protein_id="AAC76103.1" /db_xref="GI:1789448" /db_xref="ASAP:ABE-0010070" /db_xref="UniProtKB/Swiss-Prot:P00579" /db_xref="EcoGene:EG10896" /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR EKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID MNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD" repeat_region 3077619..3077651 /note="REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3077694..3078200) /gene="mug" /locus_tag="b3068" /gene_synonym="dug" /gene_synonym="ECK3058" /gene_synonym="JW3040" /gene_synonym="ygjF" /db_xref="EcoGene:EG12717" CDS complement(3077694..3078200) /gene="mug" /locus_tag="b3068" /gene_synonym="dug" /gene_synonym="ECK3058" /gene_synonym="JW3040" /gene_synonym="ygjF" /EC_number="3.2.2.-" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006281 - DNA repair" /codon_start=1 /transl_table=11 /product="G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase" /protein_id="AAC76104.1" /db_xref="GI:1789449" /db_xref="ASAP:ABE-0010073" /db_xref="UniProtKB/Swiss-Prot:P0A9H1" /db_xref="EcoGene:EG12717" /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD QALVVRGR" gene 3078325..3078400 /gene="ileX" /locus_tag="b3069" /gene_synonym="ECK3059" /gene_synonym="JWR0069" /db_xref="EcoGene:EG30046" tRNA 3078325..3078400 /gene="ileX" /locus_tag="b3069" /gene_synonym="ECK3059" /gene_synonym="JWR0069" /product="tRNA-Ile" /note="anticodon: CAU" /db_xref="ASAP:ABE-0010076" /db_xref="EcoGene:EG30046" gene complement(3078454..3079218) /gene="yqjH" /locus_tag="b3070" /gene_synonym="ECK3060" /gene_synonym="JW3041" /db_xref="EcoGene:EG12953" CDS complement(3078454..3079218) /gene="yqjH" /locus_tag="b3070" /gene_synonym="ECK3060" /gene_synonym="JW3041" /codon_start=1 /transl_table=11 /product="putative siderophore interacting protein" /protein_id="AAC76105.1" /db_xref="GI:1789450" /db_xref="ASAP:ABE-0010079" /db_xref="UniProtKB/Swiss-Prot:Q46871" /db_xref="EcoGene:EG12953" /translation="MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK" repeat_region 3079328..3079405 /note="REP228 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 3079506..3080129 /gene="yqjI" /locus_tag="b3071" /gene_synonym="ECK3061" /gene_synonym="JW3042" /db_xref="EcoGene:EG12954" CDS 3079506..3080129 /gene="yqjI" /locus_tag="b3071" /gene_synonym="ECK3061" /gene_synonym="JW3042" /codon_start=1 /transl_table=11 /product="PadR family putative transcriptional regulator" /protein_id="AAC76106.1" /db_xref="GI:1789452" /db_xref="ASAP:ABE-0010084" /db_xref="UniProtKB/Swiss-Prot:P64588" /db_xref="EcoGene:EG12954" /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD" repeat_region 3080161..3080249 /note="REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3080283..3081803) /gene="aer" /locus_tag="b3072" /gene_synonym="air" /gene_synonym="ECK3062" /gene_synonym="JW3043" /gene_synonym="yqjJ" /db_xref="EcoGene:EG12955" CDS complement(3080283..3081803) /gene="aer" /locus_tag="b3072" /gene_synonym="air" /gene_synonym="ECK3062" /gene_synonym="JW3043" /gene_synonym="yqjJ" /function="regulator; Degradation of small molecules: Carbon compounds" /note="aerotaxis sensor receptor, flavoprotein; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0042330 - taxis" /codon_start=1 /transl_table=11 /product="fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component" /protein_id="AAC76107.1" /db_xref="GI:1789453" /db_xref="ASAP:ABE-0010087" /db_xref="UniProtKB/Swiss-Prot:P50466" /db_xref="EcoGene:EG12955" /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYT LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP LRWRARGVMTLMFILLAAMLWFVAAPVVTYILCALVVLLASACFEWQIVRPIENVAHQ ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAM TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH" gene 3082221..3083600 /gene="patA" /locus_tag="b3073" /gene_synonym="ECK3063" /gene_synonym="JW5510" /gene_synonym="ygjG" /db_xref="EcoGene:EG12718" CDS 3082221..3083600 /gene="patA" /locus_tag="b3073" /gene_synonym="ECK3063" /gene_synonym="JW5510" /gene_synonym="ygjG" /EC_number="2.6.1.29" /function="putative enzyme; Amino acid biosynthesis: Arginine" /note="probable ornithine aminotransferase; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0008615 - pyridoxine biosynthetic process" /codon_start=1 /transl_table=11 /product="putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent" /protein_id="AAC76108.3" /db_xref="GI:145693181" /db_xref="ASAP:ABE-0010092" /db_xref="UniProtKB/Swiss-Prot:P42588" /db_xref="EcoGene:EG12718" /translation="MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKE HVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPV VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKL AKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAM RTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTG MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG GNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMA IEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALA AMRVSVEEA" repeat_region 3083607..3083637 /note="REP230 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3083642..3083974) /gene="ygjH" /locus_tag="b3074" /gene_synonym="ECK3064" /gene_synonym="JW3045" /db_xref="EcoGene:EG12719" CDS complement(3083642..3083974) /gene="ygjH" /locus_tag="b3074" /gene_synonym="ECK3064" /gene_synonym="JW3045" /function="putative enzyme; Not classified" /note="putative tRNA synthetase; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="putative tRNA binding protein; putative tRNA corner chaperone" /protein_id="AAC76109.1" /db_xref="GI:1789455" /db_xref="ASAP:ABE-0010094" /db_xref="UniProtKB/Swiss-Prot:P42589" /db_xref="EcoGene:EG12719" /translation="METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQ TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM MPAGVRVV" gene 3084193..3085176 /gene="ebgR" /locus_tag="b3075" /gene_synonym="ECK3065" /gene_synonym="JW3046" /db_xref="EcoGene:EG10254" CDS 3084193..3085176 /gene="ebgR" /locus_tag="b3075" /gene_synonym="ECK3065" /gene_synonym="JW3046" /function="regulator; Degradation of small molecules: Carbon compounds" /note="regulator of ebg operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor" /protein_id="AAC76110.1" /db_xref="GI:1789456" /db_xref="ASAP:ABE-0010099" /db_xref="UniProtKB/Swiss-Prot:P06846" /db_xref="EcoGene:EG10254" /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN CYEHSGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPGSGYDAVDIDLAR ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS SSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR" gene 3085360..3088452 /gene="ebgA" /locus_tag="b3076" /gene_synonym="ECK3066" /gene_synonym="JW5511" /db_xref="EcoGene:EG10252" CDS 3085360..3088452 /gene="ebgA" /locus_tag="b3076" /gene_synonym="ECK3066" /gene_synonym="JW5511" /EC_number="3.2.1.23" /function="enzyme; Degradation of small molecules: Carbon compounds" /experiment="N-terminus verified by Edman degradation: PMID 7492325" /note="evolved beta-D-galactosidase, alpha subunit; cryptic gene; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="evolved beta-D-galactosidase, alpha subunit" /protein_id="AAT48164.1" /db_xref="GI:48994920" /db_xref="ASAP:ABE-0010104" /db_xref="UniProtKB/Swiss-Prot:P06864" /db_xref="EcoGene:EG10252" /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT DFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTT LDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR TRYSEAGHPIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ SDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW TALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ " gene 3088449..3088898 /gene="ebgC" /locus_tag="b3077" /gene_synonym="ECK3067" /gene_synonym="JW3048" /db_xref="EcoGene:EG10253" CDS 3088449..3088898 /gene="ebgC" /locus_tag="b3077" /gene_synonym="ECK3067" /gene_synonym="JW3048" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="evolved beta-D-galactosidase, beta subunit; cryptic gene; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="evolved beta-D-galactosidase, beta subunit; cupin superfamily" /protein_id="AAC76112.1" /db_xref="GI:1789458" /db_xref="ASAP:ABE-0010106" /db_xref="UniProtKB/Swiss-Prot:P0AC73" /db_xref="EcoGene:EG10253" /translation="MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDS LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK" gene 3088961..3090394 /gene="ygjI" /locus_tag="b3078" /gene_synonym="ebgB" /gene_synonym="ECK3068" /gene_synonym="JW5512" /db_xref="EcoGene:EG12720" CDS 3088961..3090394 /gene="ygjI" /locus_tag="b3078" /gene_synonym="ebgB" /gene_synonym="ECK3068" /gene_synonym="JW5512" /function="orf; Not classified" /note="putative oxidoreductase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAT48165.1" /db_xref="GI:48994921" /db_xref="ASAP:ABE-0010110" /db_xref="UniProtKB/Swiss-Prot:P42590" /db_xref="EcoGene:EG12720" /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM LLLTLSYILLAGTALVGGVQPADAITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA WWKYSKYIKGLTAEERHIEATPASNVD" gene 3090528..3091598 /gene="ygjJ" /locus_tag="b3079" /gene_synonym="ECK3069" /gene_synonym="JW3050" /db_xref="EcoGene:EG12721" CDS 3090528..3091598 /gene="ygjJ" /locus_tag="b3079" /gene_synonym="ECK3069" /gene_synonym="JW3050" /codon_start=1 /transl_table=11 /product="putative periplasmic protein" /protein_id="AAC76114.1" /db_xref="GI:1789461" /db_xref="ASAP:ABE-0010115" /db_xref="UniProtKB/Swiss-Prot:P42591" /db_xref="EcoGene:EG12721" /translation="MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTS SPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADH DGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMM NGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSES GMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGGRFATAFDSR FYMKNASHDPSDQIFLMQYFYW" gene 3091615..3093966 /gene="ygjK" /locus_tag="b3080" /gene_synonym="ECK3070" /gene_synonym="JW3051" /db_xref="EcoGene:EG12722" CDS 3091615..3093966 /gene="ygjK" /locus_tag="b3080" /gene_synonym="ECK3070" /gene_synonym="JW3051" /function="enzyme; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="alpha-glucosidase" /protein_id="AAC76115.1" /db_xref="GI:1789462" /db_xref="ASAP:ABE-0010118" /db_xref="UniProtKB/Swiss-Prot:P42592" /db_xref="EcoGene:EG12722" /translation="MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDY DYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQD GKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDG ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEY QVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAF YLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVT GRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDL IAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWL RNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDS LEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLG YSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQ FYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFN TFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAK GLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ" repeat_region 3093979..3094261 /note="REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences" gene 3094392..3096410 /gene="fadH" /locus_tag="b3081" /gene_synonym="ECK3071" /gene_synonym="JW3052" /gene_synonym="ygjL" /db_xref="EcoGene:EG12723" CDS 3094392..3096410 /gene="fadH" /locus_tag="b3081" /gene_synonym="ECK3071" /gene_synonym="JW3052" /gene_synonym="ygjL" /EC_number="1.3.1.34" /function="orf; Not classified" /note="GO_process: GO:0019395 - fatty acid oxidation" /codon_start=1 /transl_table=11 /product="2,4-dienoyl-CoA reductase, NADH and FMN-linked" /protein_id="AAC76116.1" /db_xref="GI:1789463" /db_xref="ASAP:ABE-0010124" /db_xref="UniProtKB/Swiss-Prot:P42593" /db_xref="EcoGene:EG12723" /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI LHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVE VMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT ADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF DTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI" repeat_region 3096426..3096446 /note="REP232 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3096455..3096871) /gene="higA" /locus_tag="b3082" /gene_synonym="ECK3072" /gene_synonym="JW3053" /gene_synonym="ygjM" /db_xref="EcoGene:EG12724" CDS complement(3096455..3096871) /gene="higA" /locus_tag="b3082" /gene_synonym="ECK3072" /gene_synonym="JW3053" /gene_synonym="ygjM" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="antitoxinof the HigB-HigA toxin-antitoxin system" /protein_id="AAC76117.1" /db_xref="GI:1789464" /db_xref="ASAP:ABE-0010126" /db_xref="UniProtKB/Swiss-Prot:P67701" /db_xref="EcoGene:EG12724" /translation="MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID" gene complement(3096868..3097182) /gene="higB" /locus_tag="b3083" /gene_synonym="ECK3073" /gene_synonym="JW3054" /gene_synonym="ygjN" /db_xref="EcoGene:EG12725" CDS complement(3096868..3097182) /gene="higB" /locus_tag="b3083" /gene_synonym="ECK3073" /gene_synonym="JW3054" /gene_synonym="ygjN" /codon_start=1 /transl_table=11 /product="mRNA interferase toxin of the HigB-HigA toxin-antitoxin system" /protein_id="AAC76118.1" /db_xref="GI:1789465" /db_xref="ASAP:ABE-0010128" /db_xref="UniProtKB/Swiss-Prot:P64578" /db_xref="EcoGene:EG12725" /translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG KK" repeat_region 3097365..3097450 /note="REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3097466..3098602) /gene="rlmG" /locus_tag="b3084" /gene_synonym="ECK3074" /gene_synonym="JW5513" /gene_synonym="rsmD" /gene_synonym="ygjO" /db_xref="EcoGene:EG12726" CDS complement(3097466..3098602) /gene="rlmG" /locus_tag="b3084" /gene_synonym="ECK3074" /gene_synonym="JW5513" /gene_synonym="rsmD" /gene_synonym="ygjO" /function="enzyme; rRNA modification" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="23S rRNA m(2)G1835 methyltransferase, SAM-dependent" /protein_id="AAC76119.2" /db_xref="GI:87082206" /db_xref="ASAP:ABE-0010133" /db_xref="UniProtKB/Swiss-Prot:P42596" /db_xref="EcoGene:EG12726" /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR" gene 3098687..3099190 /gene="ygjP" /locus_tag="b3085" /gene_synonym="ECK3075" /gene_synonym="JW5514" /db_xref="EcoGene:EG12727" CDS 3098687..3099190 /gene="ygjP" /locus_tag="b3085" /gene_synonym="ECK3075" /gene_synonym="JW5514" /codon_start=1 /transl_table=11 /product="putative metal dependent hydrolase" /protein_id="AAC76120.2" /db_xref="GI:87082207" /db_xref="ASAP:ABE-0010138" /db_xref="UniProtKB/Swiss-Prot:P42597" /db_xref="EcoGene:EG12727" /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIR VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL SLGQNKI" gene 3099267..3099959 /gene="ygjQ" /locus_tag="b3086" /gene_synonym="ECK3076" /gene_synonym="JW3057" /db_xref="EcoGene:EG12728" CDS 3099267..3099959 /gene="ygjQ" /locus_tag="b3086" /gene_synonym="ECK3076" /gene_synonym="JW3057" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF218 superfamily protein" /protein_id="AAC76121.1" /db_xref="GI:1789468" /db_xref="ASAP:ABE-0010142" /db_xref="UniProtKB/Swiss-Prot:P42598" /db_xref="EcoGene:EG12728" /translation="MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNAS KQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKN YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRA IWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMI GPFSEHGCPAQK" gene 3100038..3101024 /gene="ygjR" /locus_tag="b3087" /gene_synonym="ECK3077" /gene_synonym="JW3058" /db_xref="EcoGene:EG12729" CDS 3100038..3101024 /gene="ygjR" /locus_tag="b3087" /gene_synonym="ECK3077" /gene_synonym="JW3058" /codon_start=1 /transl_table=11 /product="putative NAD(P)-dependent dehydrogenase" /protein_id="AAC76122.2" /db_xref="GI:145693182" /db_xref="ASAP:ABE-0010148" /db_xref="UniProtKB/Swiss-Prot:P42599" /db_xref="EcoGene:EG12729" /translation="MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFAN DFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAE VDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMD YGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHI NTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL" gene 3101307..3102272 /gene="alx" /locus_tag="b3088" /gene_synonym="ECK3079" /gene_synonym="JW5515" /gene_synonym="ygjT" /db_xref="EcoGene:EG12731" CDS 3101307..3102272 /gene="alx" /locus_tag="b3088" /gene_synonym="ECK3079" /gene_synonym="JW5515" /gene_synonym="ygjT" /function="putative transport; Not classified" /note="putative transport protein; GO_process: GO:0006950 - response to stress" /codon_start=1 /transl_table=11 /product="putative membrane-bound redox modulator" /protein_id="AAT48166.1" /db_xref="GI:48994922" /db_xref="ASAP:ABE-0010151" /db_xref="UniProtKB/Swiss-Prot:P42601" /db_xref="EcoGene:EG12731" /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG" gene 3102671..3103915 /gene="sstT" /locus_tag="b3089" /gene_synonym="ECK3080" /gene_synonym="JW3060" /gene_synonym="ygjU" /db_xref="EcoGene:EG12732" CDS 3102671..3103915 /gene="sstT" /locus_tag="b3089" /gene_synonym="ECK3080" /gene_synonym="JW3060" /gene_synonym="ygjU" /function="putative transport; Not classified" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006564 - L-serine biosynthetic process; GO_process: GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="sodium:serine/threonine symporter" /protein_id="AAC76124.1" /db_xref="GI:1789473" /db_xref="ASAP:ABE-0010159" /db_xref="UniProtKB/Swiss-Prot:P0AGE4" /db_xref="EcoGene:EG12732" /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD VLFTAAACQAEDDRLANSALRN" gene complement(3103920..3104471) /gene="ygjV" /locus_tag="b3090" /gene_synonym="ECK3081" /gene_synonym="JW3061" /db_xref="EcoGene:EG12733" CDS complement(3103920..3104471) /gene="ygjV" /locus_tag="b3090" /gene_synonym="ECK3081" /gene_synonym="JW3061" /codon_start=1 /transl_table=11 /product="Imp-YgjV family inner membrane protein" /protein_id="AAC76125.1" /db_xref="GI:1789474" /db_xref="ASAP:ABE-0010161" /db_xref="UniProtKB/Swiss-Prot:P42603" /db_xref="EcoGene:EG12733" /translation="MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVH FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG TIVSTWALFCCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW RMQKRGIDPFKVEKTPSAVDERG" gene complement(3104554..3106041) /gene="uxaA" /locus_tag="b3091" /gene_synonym="ECK3082" /gene_synonym="JW3062" /gene_synonym="ygjW" /db_xref="EcoGene:EG12734" CDS complement(3104554..3106041) /gene="uxaA" /locus_tag="b3091" /gene_synonym="ECK3082" /gene_synonym="JW3062" /gene_synonym="ygjW" /EC_number="4.2.1.7" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="altronate hydrolase" /protein_id="AAC76126.1" /db_xref="GI:1789475" /db_xref="ASAP:ABE-0010164" /db_xref="UniProtKB/Swiss-Prot:P42604" /db_xref="EcoGene:EG12734" /translation="MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKF ALTDIAKGANVIKYGLPIGYALADIAAGVHVHAHNTRTNLSDLDQYRYQPDFQDLPAQ AADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLF SHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPER VHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITAN PMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIA HDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAP GNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQL IHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL" gene complement(3106056..3107468) /gene="uxaC" /locus_tag="b3092" /gene_synonym="ECK3083" /gene_synonym="JW3063" /gene_synonym="ygjX" /gene_synonym="ygjY" /gene_synonym="ygjZ" /db_xref="EcoGene:EG12737" CDS complement(3106056..3107468) /gene="uxaC" /locus_tag="b3092" /gene_synonym="ECK3083" /gene_synonym="JW3063" /gene_synonym="ygjX" /gene_synonym="ygjY" /gene_synonym="ygjZ" /EC_number="5.3.1.12" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="uronate isomerase" /protein_id="AAC76127.1" /db_xref="GI:2367192" /db_xref="ASAP:ABE-0010167" /db_xref="UniProtKB/Swiss-Prot:P0A8G3" /db_xref="EcoGene:EG12737" /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG EMVKNICFNNARDYFAIELN" gene 3107951..3109249 /gene="exuT" /locus_tag="b3093" /gene_synonym="ECK3084" /gene_synonym="JW3064" /db_xref="EcoGene:EG12738" CDS 3107951..3109249 /gene="exuT" /locus_tag="b3093" /gene_synonym="ECK3084" /gene_synonym="JW3064" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="transport of hexuronates; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="hexuronate transporter" /protein_id="AAC76128.2" /db_xref="GI:669802030" /db_xref="ASAP:ABE-0010171" /db_xref="UniProtKB/Swiss-Prot:P0AA78" /db_xref="EcoGene:EG12738" /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLA VARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSP LFAVLAVFDLLGALVIWTVLQNKPAIEVAQETHNDPAPQH" gene 3109379..3110155 /gene="exuR" /locus_tag="b3094" /gene_synonym="ECK3085" /gene_synonym="JW3065" /db_xref="EcoGene:EG12739" CDS 3109379..3110155 /gene="exuR" /locus_tag="b3094" /gene_synonym="ECK3085" /gene_synonym="JW3065" /function="regulator; Degradation of small molecules: Carbon compounds" /note="negative regulator of exu regulon, exuT, uxaAC, and uxuB; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="hexuronate regulon transcriptional repressor; autorepressor" /protein_id="AAC76129.2" /db_xref="GI:87082208" /db_xref="ASAP:ABE-0010176" /db_xref="UniProtKB/Swiss-Prot:P0ACL2" /db_xref="EcoGene:EG12739" /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK" gene 3110500..3111162 /gene="yqjA" /locus_tag="b3095" /gene_synonym="ecfL" /gene_synonym="ECK3086" /gene_synonym="JW3066" /db_xref="EcoGene:EG12740" CDS 3110500..3111162 /gene="yqjA" /locus_tag="b3095" /gene_synonym="ecfL" /gene_synonym="ECK3086" /gene_synonym="JW3066" /function="membrane; inner membrane; cell division" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter" /protein_id="AAC76130.1" /db_xref="GI:1789481" /db_xref="ASAP:ABE-0010181" /db_xref="UniProtKB/Swiss-Prot:P0AA63" /db_xref="EcoGene:EG12740" /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN RG" gene 3111166..3111549 /gene="mzrA" /locus_tag="b3096" /gene_synonym="ecfM" /gene_synonym="ECK3087" /gene_synonym="JW3067" /gene_synonym="yqjB" /db_xref="EcoGene:EG12741" CDS 3111166..3111549 /gene="mzrA" /locus_tag="b3096" /gene_synonym="ecfM" /gene_synonym="ECK3087" /gene_synonym="JW3067" /gene_synonym="yqjB" /codon_start=1 /transl_table=11 /product="modulator of EnvZ/OmpR regulon" /protein_id="AAC76131.1" /db_xref="GI:1789482" /db_xref="ASAP:ABE-0010183" /db_xref="UniProtKB/Swiss-Prot:P42615" /db_xref="EcoGene:EG12741" /translation="MQIPRMSLRQLAWSGAVLLLVGTLLLAWSAVRQQESTLAIRAVH QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI IAQQDNNSQAMQWLTRLRDNSHRFG" gene 3111696..3112064 /gene="yqjC" /locus_tag="b3097" /gene_synonym="ECK3088" /gene_synonym="JW5516" /db_xref="EcoGene:EG12742" CDS 3111696..3112064 /gene="yqjC" /locus_tag="b3097" /gene_synonym="ECK3088" /gene_synonym="JW5516" /codon_start=1 /transl_table=11 /product="DUF1090 family putative periplasmic protein" /protein_id="AAC76132.2" /db_xref="GI:87082209" /db_xref="ASAP:ABE-0010188" /db_xref="UniProtKB/Swiss-Prot:P42616" /db_xref="EcoGene:EG12742" /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ NRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAK RERKLAEAQEELKKLEARDY" gene 3112102..3112407 /gene="yqjD" /locus_tag="b3098" /gene_synonym="ECK3089" /gene_synonym="JW3069" /db_xref="EcoGene:EG12743" CDS 3112102..3112407 /gene="yqjD" /locus_tag="b3098" /gene_synonym="ECK3089" /gene_synonym="JW3069" /codon_start=1 /transl_table=11 /product="membrane-anchored ribosome-binding protein" /protein_id="AAC76133.1" /db_xref="GI:1789485" /db_xref="ASAP:ABE-0010192" /db_xref="UniProtKB/Swiss-Prot:P64581" /db_xref="EcoGene:EG12743" /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR" gene 3112410..3112814 /gene="yqjE" /locus_tag="b3099" /gene_synonym="ECK3090" /gene_synonym="JW3070" /db_xref="EcoGene:EG12744" CDS 3112410..3112814 /gene="yqjE" /locus_tag="b3099" /gene_synonym="ECK3090" /gene_synonym="JW3070" /codon_start=1 /transl_table=11 /product="DUF1469 family inner membrane protein" /protein_id="AAC76134.1" /db_xref="GI:1789486" /db_xref="ASAP:ABE-0010195" /db_xref="UniProtKB/Swiss-Prot:P64585" /db_xref="EcoGene:EG12744" /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW TLRKSRKSTLLRHTRHELANDRQLLEEESREQ" gene 3112804..3113103 /gene="yqjK" /locus_tag="b3100" /gene_synonym="ECK3091" /gene_synonym="JW3071" /db_xref="EcoGene:EG14314" CDS 3112804..3113103 /gene="yqjK" /locus_tag="b3100" /gene_synonym="ECK3091" /gene_synonym="JW3071" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC76135.1" /db_xref="GI:1789487" /db_xref="ASAP:ABE-0010197" /db_xref="UniProtKB/Swiss-Prot:Q47710" /db_xref="EcoGene:EG14314" /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLETTGAYDRRWN MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG" gene 3113289..3113681 /gene="yqjF" /locus_tag="b3101" /gene_synonym="ECK3092" /gene_synonym="JW5850" /db_xref="EcoGene:EG12745" CDS 3113289..3113681 /gene="yqjF" /locus_tag="b3101" /gene_synonym="ECK3092" /gene_synonym="JW5850" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative quinol oxidase subunit" /protein_id="AAC76136.2" /db_xref="GI:87082210" /db_xref="ASAP:ABE-0010200" /db_xref="UniProtKB/Swiss-Prot:P42619" /db_xref="EcoGene:EG12745" /translation="MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVP GFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKN LTISGGFLLLAITGPGAYSIDRLLNKKW" gene 3113751..3114737 /gene="yqjG" /locus_tag="b3102" /gene_synonym="ECK3093" /gene_synonym="JW3073" /db_xref="EcoGene:EG12746" CDS 3113751..3114737 /gene="yqjG" /locus_tag="b3102" /gene_synonym="ECK3093" /gene_synonym="JW3073" /function="putative enzyme; Not classified" /note="putative transferase" /codon_start=1 /transl_table=11 /product="putative S-transferase" /protein_id="AAC76137.1" /db_xref="GI:1789489" /db_xref="ASAP:ABE-0010203" /db_xref="UniProtKB/Swiss-Prot:P42620" /db_xref="EcoGene:EG12746" /translation="MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTG TGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSF PGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLA RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRD IYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG" repeat_region 3114792..3114889 /note="RIP234 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 3115031..3115396 /gene="yhaH" /locus_tag="b3103" /gene_synonym="ECK3094" /gene_synonym="JW3074" /db_xref="EcoGene:EG12747" CDS 3115031..3115396 /gene="yhaH" /locus_tag="b3103" /gene_synonym="ECK3094" /gene_synonym="JW3074" /function="putative carrier; Not classified" /note="putative cytochrome; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF805 family inner membrane protein" /protein_id="AAC76138.1" /db_xref="GI:2367196" /db_xref="ASAP:ABE-0010207" /db_xref="UniProtKB/Swiss-Prot:P64590" /db_xref="EcoGene:EG12747" /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN CQAGTPGENRFGPDPKLEP" repeat_region 3115410..3115432 /note="REP235 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 3115638..3115994 /gene="yhaI" /locus_tag="b3104" /gene_synonym="ECK3095" /gene_synonym="JW3075" /db_xref="EcoGene:EG12748" CDS 3115638..3115994 /gene="yhaI" /locus_tag="b3104" /gene_synonym="ECK3095" /gene_synonym="JW3075" /function="putative carrier; Not classified" /note="putative cytochrome; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF805 family inner membrane protein" /protein_id="AAC76139.1" /db_xref="GI:1789491" /db_xref="ASAP:ABE-0010211" /db_xref="UniProtKB/Swiss-Prot:P64592" /db_xref="EcoGene:EG12748" /translation="MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL GLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEG TSGSNRYGNDPKFGSN" gene complement(3116045..3116941) /gene="yhaJ" /locus_tag="b3105" /gene_synonym="ECK3096" /gene_synonym="JW3076" /db_xref="EcoGene:EG12749" CDS complement(3116045..3116941) /gene="yhaJ" /locus_tag="b3105" /gene_synonym="ECK3096" /gene_synonym="JW3076" /function="putative regulator; Not classified" /note="putative transcriptional regulator LYSR-type; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="LysR family putative transcriptional regulator" /protein_id="AAC76140.1" /db_xref="GI:1789492" /db_xref="ASAP:ABE-0010213" /db_xref="UniProtKB/Swiss-Prot:P67660" /db_xref="EcoGene:EG12749" /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR RDSMGEAKSWCLREIPKLFNGK" gene 3117046..3117747 /gene="yhaK" /locus_tag="b3106" /gene_synonym="ECK3097" /gene_synonym="JW3077" /db_xref="EcoGene:EG12750" CDS 3117046..3117747 /gene="yhaK" /locus_tag="b3106" /gene_synonym="ECK3097" /gene_synonym="JW3077" /codon_start=1 /transl_table=11 /product="redox-sensitive bicupin" /protein_id="AAC76141.1" /db_xref="GI:1789493" /db_xref="ASAP:ABE-0010217" /db_xref="UniProtKB/Swiss-Prot:P42624" /db_xref="EcoGene:EG12750" /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGAMGSLQLRQQVW LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL VADSPLRALLIDLPV" gene 3117770..3117934 /gene="yhaL" /locus_tag="b3107" /gene_synonym="ECK3098" /gene_synonym="JW5517" /db_xref="EcoGene:EG12751" CDS 3117770..3117934 /gene="yhaL" /locus_tag="b3107" /gene_synonym="ECK3098" /gene_synonym="JW5517" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC76142.2" /db_xref="GI:87082211" /db_xref="ASAP:ABE-0010219" /db_xref="UniProtKB/Swiss-Prot:P42625" /db_xref="EcoGene:EG12751" /translation="MSKKLAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE TRLAEDEATA" repeat_region 3117944..3118046 /note="REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3118068..3119378) /gene="yhaM" /locus_tag="b4470" /gene_synonym="ECK3099" /gene_synonym="JW5518" /gene_synonym="yhaN" /db_xref="EcoGene:EG12752" CDS complement(3118068..3119378) /gene="yhaM" /locus_tag="b4470" /gene_synonym="ECK3099" /gene_synonym="JW5518" /gene_synonym="yhaN" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative L-serine dehydratase alpha chain" /protein_id="AAT48167.1" /db_xref="GI:48994923" /db_xref="ASAP:ABE-0174100" /db_xref="UniProtKB/Swiss-Prot:P42626" /db_xref="EcoGene:EG12752" /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ AIADAKALLAAGKVSVKIQEPCDEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHDG VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR" gene complement(3119406..3120737) /gene="yhaO" /locus_tag="b3110" /gene_synonym="ECK3100" /gene_synonym="JW5519" /db_xref="EcoGene:EG12754" CDS complement(3119406..3120737) /gene="yhaO" /locus_tag="b3110" /gene_synonym="ECK3100" /gene_synonym="JW5519" /function="putative transport; Not classified" /note="putative transport system permease protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAT48168.3" /db_xref="GI:145693183" /db_xref="ASAP:ABE-0010228" /db_xref="UniProtKB/Swiss-Prot:P42628" /db_xref="EcoGene:EG12754" /translation="MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMS IGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSV ISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL VLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLV KNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFF YAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFG VYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTS ICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS" gene complement(3121012..3122376) /gene="tdcG" /locus_tag="b4471" /gene_synonym="ECK3101" /gene_synonym="JW5520" /gene_synonym="yhaP" /gene_synonym="yhaQ" /db_xref="EcoGene:EG12756" CDS complement(3121012..3122376) /gene="tdcG" /locus_tag="b4471" /gene_synonym="ECK3101" /gene_synonym="JW5520" /gene_synonym="yhaP" /gene_synonym="yhaQ" /EC_number="4.3.1.17" /note="L-serine dehydratase; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="L-serine dehydratase 3, anaerobic" /protein_id="AAT48169.1" /db_xref="GI:48994925" /db_xref="ASAP:ABE-0174101" /db_xref="UniProtKB/Swiss-Prot:P42630" /db_xref="EcoGene:EG12756" /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH IVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLS HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK VVCG" gene complement(3122448..3122837) /gene="tdcF" /locus_tag="b3113" /gene_synonym="ECK3102" /gene_synonym="JW5521" /gene_synonym="yhaR" /db_xref="EcoGene:EG12757" CDS complement(3122448..3122837) /gene="tdcF" /locus_tag="b3113" /gene_synonym="ECK3102" /gene_synonym="JW5521" /gene_synonym="yhaR" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="putative reactive intermediate deaminase" /protein_id="AAC76148.2" /db_xref="GI:87082213" /db_xref="ASAP:ABE-0010240" /db_xref="UniProtKB/Swiss-Prot:P0AGL2" /db_xref="EcoGene:EG12757" /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY PTRSCVQVARLPKDVKLEIEAIAVRSA" gene complement(3122851..3125145) /gene="tdcE" /locus_tag="b3114" /gene_synonym="ECK3103" /gene_synonym="JW5522" /gene_synonym="yhaS" /db_xref="EcoGene:EG12758" CDS complement(3122851..3125145) /gene="tdcE" /locus_tag="b3114" /gene_synonym="ECK3103" /gene_synonym="JW5522" /gene_synonym="yhaS" /EC_number="2.3.1.54" /function="putative enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="probable formate acetyltransferase 3; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="pyruvate formate-lyase 4/2-ketobutyrate formate-lyase" /protein_id="AAT48170.1" /db_xref="GI:48994926" /db_xref="ASAP:ABE-0010242" /db_xref="UniProtKB/Swiss-Prot:P42632" /db_xref="EcoGene:EG12758" /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG GAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGY AVRFNALTREQQQDVISRTFTQAL" gene complement(3125179..3126387) /gene="tdcD" /locus_tag="b3115" /gene_synonym="ECK3104" /gene_synonym="JW5806" /gene_synonym="yhaA" /db_xref="EcoGene:EG11172" CDS complement(3125179..3126387) /gene="tdcD" /locus_tag="b3115" /gene_synonym="ECK3104" /gene_synonym="JW5806" /gene_synonym="yhaA" /EC_number="2.7.2.15" /function="putative enzyme; Not classified" /note="propionate kinase/acetate kinase II, anaerobic; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="propionate kinase/acetate kinase C, anaerobic" /protein_id="AAC76150.2" /db_xref="GI:145693184" /db_xref="ASAP:ABE-0010245" /db_xref="UniProtKB/Swiss-Prot:P11868" /db_xref="EcoGene:EG11172" /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI RRLVMEHLAVLGLEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL GKVNAPAEFA" gene complement(3126413..3127744) /gene="tdcC" /locus_tag="b3116" /gene_synonym="ECK3105" /gene_synonym="JW3087" /db_xref="EcoGene:EG10991" CDS complement(3126413..3127744) /gene="tdcC" /locus_tag="b3116" /gene_synonym="ECK3105" /gene_synonym="JW3087" /function="transport; Transport of small molecules: Amino acids, amines" /note="anaerobically inducible L-threonine, L-serine permease; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009088 - threonine biosynthetic process" /codon_start=1 /transl_table=11 /product="L-threonine/L-serine transporter" /protein_id="AAC76151.1" /db_xref="GI:1789504" /db_xref="ASAP:ABE-0010247" /db_xref="UniProtKB/Swiss-Prot:P0AAD8" /db_xref="EcoGene:EG10991" /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH YLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF" gene complement(3127766..3128755) /gene="tdcB" /locus_tag="b3117" /gene_synonym="ECK3106" /gene_synonym="JW3088" /db_xref="EcoGene:EG10990" CDS complement(3127766..3128755) /gene="tdcB" /locus_tag="b3117" /gene_synonym="ECK3106" /gene_synonym="JW3088" /EC_number="4.3.1.19" /function="enzyme; Degradation of small molecules: Amino acids" /experiment="N-terminus verified by Edman degradation: PMID 6751404" /note="threonine dehydratase, catabolic; GO_process: GO:0009063 - cellular amino acid catabolic process" /codon_start=1 /transl_table=11 /product="L-threonine dehydratase, catabolic" /protein_id="AAC76152.1" /db_xref="GI:1789505" /db_xref="ASAP:ABE-0010249" /db_xref="UniProtKB/Swiss-Prot:P0AGF6" /db_xref="EcoGene:EG10990" /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA" gene complement(3128854..3129792) /gene="tdcA" /locus_tag="b3118" /gene_synonym="ECK3107" /gene_synonym="JW3089" /db_xref="EcoGene:EG10989" CDS complement(3128854..3129792) /gene="tdcA" /locus_tag="b3118" /gene_synonym="ECK3107" /gene_synonym="JW3089" /function="regulator; Degradation of small molecules: Amino acids" /note="transcriptional activator of tdc operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="tdc operon transcriptional activator" /protein_id="AAC76153.1" /db_xref="GI:1789506" /db_xref="ASAP:ABE-0010252" /db_xref="UniProtKB/Swiss-Prot:P0ACQ7" /db_xref="EcoGene:EG10989" /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV WSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG" gene 3130107..3130325 /gene="tdcR" /locus_tag="b3119" /gene_synonym="ECK3108" /gene_synonym="JW5525" /db_xref="EcoGene:EG10992" CDS 3130107..3130325 /gene="tdcR" /locus_tag="b3119" /gene_synonym="ECK3108" /gene_synonym="JW5525" /function="regulator; Degradation of small molecules: Amino acids" /note="threonine dehydratase operon activator protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0009063 - cellular amino acid catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="L-threonine dehydratase operon activator protein" /protein_id="AAC76154.2" /db_xref="GI:87082214" /db_xref="ASAP:ABE-0010255" /db_xref="UniProtKB/Swiss-Prot:P11866" /db_xref="EcoGene:EG10992" /translation="MSKFSNFIINKPFSVINNAACHIFSRYLLENKHLFYQYFKISNT CIDHLEQLINVNFFSSDRTSFCECNRFP" gene 3130581..3131120 /gene="yhaB" /locus_tag="b3120" /gene_synonym="ECK3109" /gene_synonym="JW3091" /db_xref="EcoGene:EG11173" CDS 3130581..3131120 /gene="yhaB" /locus_tag="b3120" /gene_synonym="ECK3109" /gene_synonym="JW3091" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="AAC76155.2" /db_xref="GI:87082215" /db_xref="ASAP:ABE-0010261" /db_xref="UniProtKB/Swiss-Prot:P11865" /db_xref="EcoGene:EG11173" /translation="MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTN DVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYII QTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSIT SDCWQILFFSPDHFNNDFY" gene 3131142..3132329 /gene="yhaC" /locus_tag="b3121" /gene_synonym="ECK3110" /gene_synonym="JW3092" /db_xref="EcoGene:EG11174" CDS 3131142..3132329 /gene="yhaC" /locus_tag="b3121" /gene_synonym="ECK3110" /gene_synonym="JW3092" /codon_start=1 /transl_table=11 /product="pentapetide repeats-related protein" /protein_id="AAC76156.1" /db_xref="GI:1789509" /db_xref="ASAP:ABE-0010263" /db_xref="UniProtKB/Swiss-Prot:P11864" /db_xref="EcoGene:EG11174" /translation="MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQ TSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSD NTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRN VDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPV LISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKE IYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMD LNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLL NAI" repeat_region 3132449..3132546 /note="RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(3132943..3133319) /gene="rnpB" /locus_tag="b3123" /gene_synonym="ECK3111" /gene_synonym="JWR0070" /db_xref="EcoGene:EG30069" ncRNA complement(3132943..3133319) /ncRNA_class="RNase_P_RNA" /gene="rnpB" /locus_tag="b3123" /gene_synonym="ECK3111" /gene_synonym="JWR0070" /product="RNase P, M1 RNA component" /note="RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA, 4.5S RNA, and other naturally occurring stable RNA molecules; RNase P also affects gene expression of polycistronic operon mRNAs" /function="1.2.1 metabolism; macromolecule degradation; RNA" /function="2.2.3 information transfer; RNA related; RNA modification" /function="enzyme; Degradation of RNA" /db_xref="ASAP:ABE-0010269" /db_xref="EcoGene:EG30069" gene complement(3133352..3134497) /gene="garK" /locus_tag="b3124" /gene_synonym="ECK3112" /gene_synonym="JW3093" /gene_synonym="yhaD" /db_xref="EcoGene:EG11175" CDS complement(3133352..3134497) /gene="garK" /locus_tag="b3124" /gene_synonym="ECK3112" /gene_synonym="JW3093" /gene_synonym="yhaD" /EC_number="2.7.1.165" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="glycerate kinase I" /protein_id="AAC76158.2" /db_xref="GI:145693185" /db_xref="ASAP:ABE-0010271" /db_xref="UniProtKB/Swiss-Prot:P23524" /db_xref="EcoGene:EG11175" /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG GEGTVEAMIAATQGAERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG" gene complement(3134594..3135478) /gene="garR" /locus_tag="b3125" /gene_synonym="ECK3113" /gene_synonym="JW5526" /gene_synonym="yhaE" /db_xref="EcoGene:EG11176" CDS complement(3134594..3135478) /gene="garR" /locus_tag="b3125" /gene_synonym="ECK3113" /gene_synonym="JW5526" /gene_synonym="yhaE" /EC_number="1.1.1.60" /note="tartronate semialdehyde reductase (TSAR); GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009441 - glycolate metabolic process" /codon_start=1 /transl_table=11 /product="tartronate semialdehyde reductase" /protein_id="AAC76159.3" /db_xref="GI:145693186" /db_xref="ASAP:ABE-0010273" /db_xref="UniProtKB/Swiss-Prot:P0ABQ2" /db_xref="EcoGene:EG11176" /translation="MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGA ETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASR EISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHT GEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAK APMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTAD HSALACYYEKLAKVEVTR" gene complement(3135514..3136284) /gene="garL" /locus_tag="b3126" /gene_synonym="ECK3114" /gene_synonym="JW3095" /gene_synonym="yhaF" /db_xref="EcoGene:EG10016" CDS complement(3135514..3136284) /gene="garL" /locus_tag="b3126" /gene_synonym="ECK3114" /gene_synonym="JW3095" /gene_synonym="yhaF" /EC_number="4.1.2.20" /experiment="N-terminus verified by Edman degradation: PMID 9772162" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="alpha-dehydro-beta-deoxy-D-glucarate aldolase" /protein_id="AAC76160.1" /db_xref="GI:1789514" /db_xref="ASAP:ABE-0010276" /db_xref="UniProtKB/Swiss-Prot:P23522" /db_xref="EcoGene:EG10016" /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET KEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK" gene complement(3136300..3137634) /gene="garP" /locus_tag="b3127" /gene_synonym="ECK3115" /gene_synonym="JW3096" /gene_synonym="yhaU" /db_xref="EcoGene:EG12760" CDS complement(3136300..3137634) /gene="garP" /locus_tag="b3127" /gene_synonym="ECK3115" /gene_synonym="JW3096" /gene_synonym="yhaU" /note="putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="putative (D)-galactarate transporter" /protein_id="AAC76161.1" /db_xref="GI:1789515" /db_xref="ASAP:ABE-0010279" /db_xref="UniProtKB/Swiss-Prot:P0AA80" /db_xref="EcoGene:EG12760" /translation="MILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEV AKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGF VDMFPLAWAGISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFS LALFSPLLGWLTFAWGWEHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISE NGAVVDMDHKKPGSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIY LVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLL ASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGN VASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK" gene 3138009..3139580 /gene="garD" /locus_tag="b3128" /gene_synonym="ECK3116" /gene_synonym="JW3097" /gene_synonym="yhaG" /db_xref="EcoGene:EG12522" CDS 3138009..3139580 /gene="garD" /locus_tag="b3128" /gene_synonym="ECK3116" /gene_synonym="JW3097" /gene_synonym="yhaG" /EC_number="4.2.1.42" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="D-galactarate dehydrogenase" /protein_id="AAC76162.1" /db_xref="GI:1789516" /db_xref="ASAP:ABE-0010284" /db_xref="UniProtKB/Swiss-Prot:P39829" /db_xref="EcoGene:EG12522" /translation="MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLE LIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTL PLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDL LPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKL QPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRET CPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTP RAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGK SAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVP VIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQW GLHNQLAVFNPAPVT" gene 3139729..3140064 /gene="prlF" /locus_tag="b3129" /gene_synonym="ECK3117" /gene_synonym="JW3098" /gene_synonym="sohA" /db_xref="EcoGene:EG10955" CDS 3139729..3140064 /gene="prlF" /locus_tag="b3129" /gene_synonym="ECK3117" /gene_synonym="JW3098" /gene_synonym="sohA" /function="putative enzyme; Not classified" /note="putative protease; htrA suppressor protein" /codon_start=1 /transl_table=11 /product="antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system" /protein_id="AAC76163.1" /db_xref="GI:1789517" /db_xref="ASAP:ABE-0010287" /db_xref="UniProtKB/Swiss-Prot:P15373" /db_xref="EcoGene:EG10955" /translation="MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHY EILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVN IDDEIGDDE" gene 3140064..3140528 /gene="yhaV" /locus_tag="b3130" /gene_synonym="ECK3118" /gene_synonym="JW3099" /db_xref="EcoGene:EG12761" CDS 3140064..3140528 /gene="yhaV" /locus_tag="b3130" /gene_synonym="ECK3118" /gene_synonym="JW3099" /codon_start=1 /transl_table=11 /product="toxin of the SohB(PrlF)-YhaV toxin-antitoxin system" /protein_id="AAC76164.1" /db_xref="GI:1789518" /db_xref="ASAP:ABE-0010289" /db_xref="UniProtKB/Swiss-Prot:P64594" /db_xref="EcoGene:EG12761" /translation="MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKA ATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEK EKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH" repeat_region 3140546..3140574 /note="REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3140583..3141392) /gene="agaR" /locus_tag="b3131" /gene_synonym="ECK3119" /gene_synonym="JW3100" /gene_synonym="yhaW" /db_xref="EcoGene:EG12762" CDS complement(3140583..3141392) /gene="agaR" /locus_tag="b3131" /gene_synonym="ECK3119" /gene_synonym="JW3100" /gene_synonym="yhaW" /function="regulator; Not classified" /note="putative DEOR-type transcriptional regulator of aga operon; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0046349 - amino sugar biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional repressor of the aga regulon" /protein_id="AAC76165.1" /db_xref="GI:1789519" /db_xref="ASAP:ABE-0010291" /db_xref="UniProtKB/Swiss-Prot:P0ACK2" /db_xref="EcoGene:EG12762" /translation="MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVS TVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVE LIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLR RQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERII VVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGE" gene 3141641..3142921 /gene="kbaZ" /locus_tag="b3132" /gene_synonym="agaZ" /gene_synonym="ECK3120" /gene_synonym="JW3101" /gene_synonym="yhaX" /db_xref="EcoGene:EG12763" CDS 3141641..3142921 /gene="kbaZ" /locus_tag="b3132" /gene_synonym="agaZ" /gene_synonym="ECK3120" /gene_synonym="JW3101" /gene_synonym="yhaX" /EC_number="4.1.2.40" /function="putative enzyme; Not classified" /note="putative tagatose 6-phosphate kinase 2; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="tagatose 6-phosphate aldolase 1, kbaZ subunit" /protein_id="AAC76166.1" /db_xref="GI:1789520" /db_xref="ASAP:ABE-0010295" /db_xref="UniProtKB/Swiss-Prot:P0C8K0" /db_xref="EcoGene:EG12763" /translation="MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPL LIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPA AQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCL EHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWP RIIALVVQPGVEFDHTNVIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLV IDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSH YHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQY VKVRSGELQPTPRELIINHIQDILAQYHTACEGQ" gene 3142944..3143417 /gene="agaV" /locus_tag="b3133" /gene_synonym="ECK3121" /gene_synonym="JW3102" /gene_synonym="yhaY" /db_xref="EcoGene:EG12764" CDS 3142944..3143417 /gene="agaV" /locus_tag="b3133" /gene_synonym="ECK3121" /gene_synonym="JW3102" /gene_synonym="yhaY" /EC_number="2.7.1.69" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA); GO_component: GO:0005737 - cytoplasm; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylgalactosamine-specific enzyme IIB component of PTS" /protein_id="AAC76167.2" /db_xref="GI:87082217" /db_xref="ASAP:ABE-0010297" /db_xref="UniProtKB/Swiss-Prot:P42904" /db_xref="EcoGene:EG12764" /translation="MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQ QNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRI NVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKTAGVECFVQGVPTEPAVDLFKLL" gene 3143428..3143802 /gene="agaW" /locus_tag="b3134" /gene_synonym="ECK3122" /gene_synonym="JW3103" /gene_synonym="yhaZ" /pseudo /db_xref="EcoGene:EG12765" CDS 3143428..3143802 /gene="agaW" /locus_tag="b3134" /gene_synonym="ECK3122" /gene_synonym="JW3103" /gene_synonym="yhaZ" /note="pseudogene, N-acetylgalactosamine-specific enzyme IIC component of PTS;enzyme; Central intermediary metabolism: Amino sugars; PTS system N-acetylgalactosameine-specific IIC component 2; GO_process: GO:0046349 - amino sugar biosynthetic process" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0010299" /db_xref="UniProtKB/Swiss-Prot:P42905" /db_xref="EcoGene:EG12765" gene 3143798..3144352 /gene="agaA" /locus_tag="b3135" /gene_synonym="ECK3123" /gene_synonym="JW5527" /gene_synonym="yraA" /pseudo /db_xref="EcoGene:EG12766" CDS 3143798..3144352 /gene="agaA" /locus_tag="b3135" /gene_synonym="ECK3123" /gene_synonym="JW5527" /gene_synonym="yraA" /note="pseudogene, N-acetylgalactosamine-6-phosphate deacetylase fragment; putative N-acetylgalactosamine-6-phosphate deacetylase" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0010302" /db_xref="UniProtKB/Swiss-Prot:P42906" /db_xref="EcoGene:EG12766" repeat_region 3144429..3144510 /note="REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene 3144703..3145857 /gene="agaS" /locus_tag="b3136" /gene_synonym="ECK3124" /gene_synonym="JW3105" /gene_synonym="yraB" /db_xref="EcoGene:EG12767" CDS 3144703..3145857 /gene="agaS" /locus_tag="b3136" /gene_synonym="ECK3124" /gene_synonym="JW3105" /gene_synonym="yraB" /function="putative enzyme; Not classified" /note="putative tagatose-6-phosphate aldose/ketose isomerase" /codon_start=1 /transl_table=11 /product="tagatose-6-phosphate ketose/aldose isomerase" /protein_id="AAC76170.1" /db_xref="GI:1789525" /db_xref="ASAP:ABE-0010305" /db_xref="UniProtKB/Swiss-Prot:P42907" /db_xref="EcoGene:EG12767" /translation="MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNF LEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPA HPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALL MPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGV FGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDET LVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFI DVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA" gene 3145870..3146730 /gene="kbaY" /locus_tag="b3137" /gene_synonym="agaY" /gene_synonym="ECK3125" /gene_synonym="JW3106" /gene_synonym="kba" /gene_synonym="yraC" /db_xref="EcoGene:EG12768" CDS 3145870..3146730 /gene="kbaY" /locus_tag="b3137" /gene_synonym="agaY" /gene_synonym="ECK3125" /gene_synonym="JW3106" /gene_synonym="kba" /gene_synonym="yraC" /EC_number="4.1.2.40" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="tagatose-bisphosphate aldolase 2; GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="tagatose 6-phosphate aldolase 1, kbaY subunit" /protein_id="AAC76171.1" /db_xref="GI:1789526" /db_xref="ASAP:ABE-0010307" /db_xref="UniProtKB/Swiss-Prot:P0AB74" /db_xref="EcoGene:EG12768" /translation="MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSP VILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAM IDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEA KRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFV RRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKIN VCGSANRISA" gene 3146897..3147373 /gene="agaB" /locus_tag="b3138" /gene_synonym="ECK3126" /gene_synonym="JW3107" /gene_synonym="yraD" /db_xref="EcoGene:EG12769" CDS 3146897..3147373 /gene="agaB" /locus_tag="b3138" /gene_synonym="ECK3126" /gene_synonym="JW3107" /gene_synonym="yraD" /EC_number="2.7.1.69" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA); GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="N-acetylgalactosamine-specific enzyme IIB component of PTS" /protein_id="AAC76172.1" /db_xref="GI:1789527" /db_xref="ASAP:ABE-0010310" /db_xref="UniProtKB/Swiss-Prot:P42909" /db_xref="EcoGene:EG12769" /translation="MTSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDD IQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDL KDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQRGVNVFIQDVPGDQKEQIPD" gene 3147412..3148215 /gene="agaC" /locus_tag="b3139" /gene_synonym="ECK3127" /gene_synonym="JW3108" /gene_synonym="yraE" /db_xref="EcoGene:EG12770" CDS 3147412..3148215 /gene="agaC" /locus_tag="b3139" /gene_synonym="ECK3127" /gene_synonym="JW3108" /gene_synonym="yraE" /EC_number="2.7.1.69" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="PTS system N-acetylgalactosamine-specific IIC component 1" /codon_start=1 /transl_table=11 /product="N-acetylgalactosamine-specific enzyme IIC component of PTS" /protein_id="AAC76173.1" /db_xref="GI:1789528" /db_xref="ASAP:ABE-0010312" /db_xref="UniProtKB/Swiss-Prot:P42910" /db_xref="EcoGene:EG12770" /translation="MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAIL GDIQTGLITGGLTELAFAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLP FSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCT YLAQGAMQALVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVC YIQVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI" gene 3148205..3148996 /gene="agaD" /locus_tag="b3140" /gene_synonym="ECK3128" /gene_synonym="JW3109" /gene_synonym="yraF" /db_xref="EcoGene:EG12771" CDS 3148205..3148996 /gene="agaD" /locus_tag="b3140" /gene_synonym="ECK3128" /gene_synonym="JW3109" /gene_synonym="yraF" /EC_number="2.7.1.69" /function="enzyme; Central intermediary metabolism: Amino sugars" /note="PTS system, N-acetylglucosamine enzyme IID component 1; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylgalactosamine-specific enzyme IID component of PTS" /protein_id="AAC76174.1" /db_xref="GI:1789529" /db_xref="ASAP:ABE-0010314" /db_xref="UniProtKB/Swiss-Prot:P42911" /db_xref="EcoGene:EG12771" /translation="MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKK IYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPI AGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGV KAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDNTHSVALQQDFFDK VFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL" gene 3148997..3149752 /gene="agaI" /locus_tag="b3141" /gene_synonym="ECK3129" /gene_synonym="JW3110" /gene_synonym="yraG" /db_xref="EcoGene:EG12772" CDS 3148997..3149752 /gene="agaI" /locus_tag="b3141" /gene_synonym="ECK3129" /gene_synonym="JW3110" /gene_synonym="yraG" /function="putative enzyme; Not classified" /note="putative galactosamine-6-phosphate isomerase" /codon_start=1 /transl_table=11 /product="galactosamine-6-phosphate isomerase" /protein_id="AAC76175.1" /db_xref="GI:1789530" /db_xref="ASAP:ABE-0010317" /db_xref="UniProtKB/Swiss-Prot:P42912" /db_xref="EcoGene:EG12772" /translation="MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIR SKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCETF LQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLN EPGESLQPACHISQLDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGK QDATDRFLTAKVSTAIPASFLWLHSNFICLINT" gene 3150153..3150737 /gene="yraH" /locus_tag="b3142" /gene_synonym="ECK3130" /gene_synonym="JW3111" /db_xref="EcoGene:EG12773" CDS 3150153..3150737 /gene="yraH" /locus_tag="b3142" /gene_synonym="ECK3130" /gene_synonym="JW3111" /function="putative structural component; Surface structures" /note="putative fimbrial-like protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC76176.1" /db_xref="GI:1789531" /db_xref="ASAP:ABE-0010325" /db_xref="UniProtKB/Swiss-Prot:P42913" /db_xref="EcoGene:EG12773" /translation="MNKVTKTAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSD KKIEVALGHYNAEQFRNIGERSPKIPFTIPLVNCPMTGWEHDNGNVEASFRLWLETRD NGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPAESNGI VNVDLIAYYVSTVVPSEITPGEADAIVNVTLDYR" gene 3150817..3151512 /gene="yraI" /locus_tag="b3143" /gene_synonym="ECK3131" /gene_synonym="JW3112" /db_xref="EcoGene:EG12774" CDS 3150817..3151512 /gene="yraI" /locus_tag="b3143" /gene_synonym="ECK3131" /gene_synonym="JW3112" /function="putative factor; Surface structures" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic pilin chaperone" /protein_id="AAC76177.1" /db_xref="GI:1789532" /db_xref="ASAP:ABE-0010331" /db_xref="UniProtKB/Swiss-Prot:P42914" /db_xref="EcoGene:EG12774" /translation="MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAAL PVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENK ESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRS DHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAIND YGGSSGTETRPLQ" gene 3151541..3154057 /gene="yraJ" /locus_tag="b3144" /gene_synonym="ECK3132" /gene_synonym="JW3113" /db_xref="EcoGene:EG12775" CDS 3151541..3154057 /gene="yraJ" /locus_tag="b3144" /gene_synonym="ECK3132" /gene_synonym="JW3113" /function="putative membrane; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC76178.1" /db_xref="GI:1789533" /db_xref="ASAP:ABE-0010333" /db_xref="UniProtKB/Swiss-Prot:P42915" /db_xref="EcoGene:EG12775" /translation="MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYY FDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLL QPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLNLSIPQ IALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPW RLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLA SDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSG DLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEAT AIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGY QWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWDYNSRQKSEIQFNISQTI FDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQYSRYTDQNNDRALSL NLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHN SSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDAN GASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNR GAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISS KSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH" gene 3154068..3155159 /gene="yraK" /locus_tag="b3145" /gene_synonym="ECK3133" /gene_synonym="JW3114" /db_xref="EcoGene:EG12776" CDS 3154068..3155159 /gene="yraK" /locus_tag="b3145" /gene_synonym="ECK3133" /gene_synonym="JW3114" /function="putative structural component; Surface structures" /note="putative fimbrial protein; GO_component: GO:0009289 - pilus" /codon_start=1 /transl_table=11 /product="putative fimbrial-like adhesin protein" /protein_id="AAC76179.1" /db_xref="GI:1789534" /db_xref="ASAP:ABE-0010335" /db_xref="UniProtKB/Swiss-Prot:P43319" /db_xref="EcoGene:EG12776" /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLND SLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNI GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTA PQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMR IDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVN MRAWPVNLVGGELETGKFQGTATITVIVR" gene complement(3155202..3156062) /gene="rsmI" /locus_tag="b3146" /gene_synonym="ECK3134" /gene_synonym="JW3115" /gene_synonym="yraL" /db_xref="EcoGene:EG12777" CDS complement(3155202..3156062) /gene="rsmI" /locus_tag="b3146" /gene_synonym="ECK3134" /gene_synonym="JW3115" /gene_synonym="yraL" /function="enzyme; rRNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent" /protein_id="AAC76180.1" /db_xref="GI:1789535" /db_xref="ASAP:ABE-0010337" /db_xref="UniProtKB/Swiss-Prot:P67087" /db_xref="EcoGene:EG12777" /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA LYKYALEQQG" gene 3156127..3158163 /gene="lpoA" /locus_tag="b3147" /gene_synonym="ECK3135" /gene_synonym="JW3116" /gene_synonym="yraM" /db_xref="EcoGene:EG12778" CDS 3156127..3158163 /gene="lpoA" /locus_tag="b3147" /gene_synonym="ECK3135" /gene_synonym="JW3116" /gene_synonym="yraM" /function="factor; Not classified" /note="putative glycosylase" /codon_start=1 /transl_table=11 /product="OM lipoprotein stimulator of MrcA transpeptidase" /protein_id="AAC76181.1" /db_xref="GI:1789537" /db_xref="ASAP:ABE-0010343" /db_xref="UniProtKB/Swiss-Prot:P45464" /db_xref="EcoGene:EG12778" /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKT LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI QQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQ PVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNV EELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIP RSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATT DSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATL YASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMG VDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS" gene 3158121..3158516 /gene="yraN" /locus_tag="b3148" /gene_synonym="ECK3136" /gene_synonym="JW3117" /db_xref="EcoGene:EG12779" CDS 3158121..3158516 /gene="yraN" /locus_tag="b3148" /gene_synonym="ECK3136" /gene_synonym="JW3117" /codon_start=1 /transl_table=11 /product="UPF0102 family protein" /protein_id="AAC76182.1" /db_xref="GI:1789538" /db_xref="ASAP:ABE-0010346" /db_xref="UniProtKB/Swiss-Prot:P45465" /db_xref="EcoGene:EG12779" /translation="MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVN ERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS FDTVDCRFDVVAFTGNEVEWIKDAFNDHS" gene 3158536..3159126 /gene="diaA" /locus_tag="b3149" /gene_synonym="ECK3137" /gene_synonym="JW3118" /gene_synonym="yraO" /db_xref="EcoGene:EG12780" CDS 3158536..3159126 /gene="diaA" /locus_tag="b3149" /gene_synonym="ECK3137" /gene_synonym="JW3118" /gene_synonym="yraO" /codon_start=1 /transl_table=11 /product="DnaA initiator-associating factor for replication initiation" /protein_id="AAC76183.1" /db_xref="GI:1789539" /db_xref="ASAP:ABE-0010348" /db_xref="UniProtKB/Swiss-Prot:P66817" /db_xref="EcoGene:EG12780" /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD" gene 3159136..3159711 /gene="yraP" /locus_tag="b3150" /gene_synonym="ecfH" /gene_synonym="ECK3138" /gene_synonym="JW3119" /db_xref="EcoGene:EG12781" CDS 3159136..3159711 /gene="yraP" /locus_tag="b3150" /gene_synonym="ecfH" /gene_synonym="ECK3138" /gene_synonym="JW3119" /function="putative transport; Not classified" /note="putative periplasmic protein; GO_component: GO:0042597 - periplasmic space" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein" /protein_id="AAC76184.1" /db_xref="GI:1789540" /db_xref="ASAP:ABE-0010350" /db_xref="UniProtKB/Swiss-Prot:P64596" /db_xref="EcoGene:EG12781" /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ VDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG LVTEREAKAAADIASRVSGVKRVTTAFTFIK" repeat_region 3159726..3159809 /note="REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3159825..3160865) /gene="yraQ" /locus_tag="b3151" /gene_synonym="ECK3139" /gene_synonym="JW3120" /db_xref="EcoGene:EG12782" CDS complement(3159825..3160865) /gene="yraQ" /locus_tag="b3151" /gene_synonym="ECK3139" /gene_synonym="JW3120" /codon_start=1 /transl_table=11 /product="putative inner membrane permease" /protein_id="AAC76185.1" /db_xref="GI:1789541" /db_xref="ASAP:ABE-0010353" /db_xref="UniProtKB/Swiss-Prot:P45468" /db_xref="EcoGene:EG12782" /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTA AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFS RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVI PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV SGVIVGGLALLF" gene complement(3160938..3161573) /gene="yraR" /locus_tag="b3152" /gene_synonym="ECK3140" /gene_synonym="JW5528" /db_xref="EcoGene:EG12783" CDS complement(3160938..3161573) /gene="yraR" /locus_tag="b3152" /gene_synonym="ECK3140" /gene_synonym="JW5528" /codon_start=1 /transl_table=11 /product="putative nucleoside-diphosphate-sugar epimerase" /protein_id="AAC76186.2" /db_xref="GI:87082218" /db_xref="ASAP:ABE-0010356" /db_xref="UniProtKB/Swiss-Prot:P45469" /db_xref="EcoGene:EG12783" /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV FNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE TLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE" gene 3161701..3162219 /gene="yhbO" /locus_tag="b3153" /gene_synonym="ECK3141" /gene_synonym="JW5529" /db_xref="EcoGene:EG12784" CDS 3161701..3162219 /gene="yhbO" /locus_tag="b3153" /gene_synonym="ECK3141" /gene_synonym="JW5529" /codon_start=1 /transl_table=11 /product="stress-resistance protein" /protein_id="AAC76187.2" /db_xref="GI:87082219" /db_xref="ASAP:ABE-0010361" /db_xref="UniProtKB/Swiss-Prot:P45470" /db_xref="EcoGene:EG12784" /translation="MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP AFNREALRLLGA" gene complement(3162199..3162642) /gene="yhbP" /locus_tag="b3154" /gene_synonym="ECK3142" /gene_synonym="JW3123" /db_xref="EcoGene:EG12785" CDS complement(3162199..3162642) /gene="yhbP" /locus_tag="b3154" /gene_synonym="ECK3142" /gene_synonym="JW3123" /codon_start=1 /transl_table=11 /product="UPF0306 family protein" /protein_id="AAC76188.1" /db_xref="GI:1789544" /db_xref="ASAP:ABE-0010363" /db_xref="UniProtKB/Swiss-Prot:P67762" /db_xref="EcoGene:EG12785" /translation="METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN RRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA" gene 3162693..3162995 /gene="yhbQ" /locus_tag="b3155" /gene_synonym="ECK3143" /gene_synonym="JW3124" /db_xref="EcoGene:EG12786" CDS 3162693..3162995 /gene="yhbQ" /locus_tag="b3155" /gene_synonym="ECK3143" /gene_synonym="JW3124" /codon_start=1 /transl_table=11 /product="GIY-YIG nuclease superfamily protein" /protein_id="AAC76189.1" /db_xref="GI:1789545" /db_xref="ASAP:ABE-0010370" /db_xref="UniProtKB/Swiss-Prot:P45472" /db_xref="EcoGene:EG12786" /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG ELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD" gene complement(3162982..3163485) /gene="yhbS" /locus_tag="b3156" /gene_synonym="ECK3144" /gene_synonym="JW3125" /db_xref="EcoGene:EG12788" CDS complement(3162982..3163485) /gene="yhbS" /locus_tag="b3156" /gene_synonym="ECK3144" /gene_synonym="JW3125" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="GNAT family putative N-acetyltransferase" /protein_id="AAC76190.1" /db_xref="GI:1789546" /db_xref="ASAP:ABE-0010373" /db_xref="UniProtKB/Swiss-Prot:P63417" /db_xref="EcoGene:EG12788" /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY HEHFNRF" gene complement(3163479..3164003) /gene="yhbT" /locus_tag="b3157" /gene_synonym="ECK3145" /gene_synonym="JW3126" /db_xref="EcoGene:EG12789" CDS complement(3163479..3164003) /gene="yhbT" /locus_tag="b3157" /gene_synonym="ECK3145" /gene_synonym="JW3126" /codon_start=1 /transl_table=11 /product="SCP-2 sterol transfer family protein" /protein_id="AAC76191.1" /db_xref="GI:1789547" /db_xref="ASAP:ABE-0010375" /db_xref="UniProtKB/Swiss-Prot:P64599" /db_xref="EcoGene:EG12789" /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAA RKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK TAPETKQTSVGEPC" gene 3164212..3165207 /gene="yhbU" /locus_tag="b3158" /gene_synonym="ECK3146" /gene_synonym="JW3127" /db_xref="EcoGene:EG12790" CDS 3164212..3165207 /gene="yhbU" /locus_tag="b3158" /gene_synonym="ECK3146" /gene_synonym="JW3127" /function="orf; Not classified" /note="putative collagenase" /codon_start=1 /transl_table=11 /product="U32 peptidase family protein" /protein_id="AAC76192.1" /db_xref="GI:1789548" /db_xref="ASAP:ABE-0010380" /db_xref="UniProtKB/Swiss-Prot:P45527" /db_xref="EcoGene:EG12790" /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY AAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL EVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLID RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR SPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ" gene 3165216..3166094 /gene="yhbV" /locus_tag="b3159" /gene_synonym="ECK3147" /gene_synonym="JW5530" /db_xref="EcoGene:EG12791" CDS 3165216..3166094 /gene="yhbV" /locus_tag="b3159" /gene_synonym="ECK3147" /gene_synonym="JW5530" /codon_start=1 /transl_table=11 /product="U32 peptidase family protein" /protein_id="AAC76193.2" /db_xref="GI:87082220" /db_xref="ASAP:ABE-0010382" /db_xref="UniProtKB/Swiss-Prot:P45475" /db_xref="EcoGene:EG12791" /translation="MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRA TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN GIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANS DCNGYWRRLAGLELQA" gene 3166175..3167182 /gene="yhbW" /locus_tag="b3160" /gene_synonym="ECK3148" /gene_synonym="JW3129" /db_xref="EcoGene:EG12792" CDS 3166175..3167182 /gene="yhbW" /locus_tag="b3160" /gene_synonym="ECK3148" /gene_synonym="JW3129" /function="putative enzyme; Not classified" /note="putative enzyme" /codon_start=1 /transl_table=11 /product="putative luciferase-like monooxygenase" /protein_id="AAC76194.1" /db_xref="GI:1789551" /db_xref="ASAP:ABE-0010385" /db_xref="UniProtKB/Swiss-Prot:P0ADV5" /db_xref="EcoGene:EG12792" /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL G" repeat_region 3167231..3167259 /note="REP241 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3167300..3168544) /gene="mtr" /locus_tag="b3161" /gene_synonym="ECK3149" /gene_synonym="JW3130" /db_xref="EcoGene:EG10617" CDS complement(3167300..3168544) /gene="mtr" /locus_tag="b3161" /gene_synonym="ECK3149" /gene_synonym="JW3130" /function="transport; Transport of small molecules: Amino acids, amines" /note="tryptophan-specific transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0000162 - tryptophan biosynthetic process" /codon_start=1 /transl_table=11 /product="tryptophan transporter of high affinity" /protein_id="AAC76195.1" /db_xref="GI:1789552" /db_xref="ASAP:ABE-0010387" /db_xref="UniProtKB/Swiss-Prot:P0AAD2" /db_xref="EcoGene:EG10617" /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAVGRLKTALLTFAPPV VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMIALIL VFGVGNALVHILSSFNLLPVYQ" gene complement(3168698..3170587) /gene="deaD" /locus_tag="b3162" /gene_synonym="csdA" /gene_synonym="ECK3150" /gene_synonym="JW5531" /gene_synonym="mssB" /gene_synonym="rhlD" /db_xref="EcoGene:EG10215" CDS complement(3168698..3170587) /gene="deaD" /locus_tag="b3162" /gene_synonym="csdA" /gene_synonym="ECK3150" /gene_synonym="JW5531" /gene_synonym="mssB" /gene_synonym="rhlD" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="inducible ATP-independent RNA helicase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="AAC76196.2" /db_xref="GI:87082221" /db_xref="ASAP:ABE-0010392" /db_xref="UniProtKB/Swiss-Prot:P0A9P6" /db_xref="EcoGene:EG10215" /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR FGGDA" gene complement(3170580..3170660) /gene="yrbN" /locus_tag="b4685" /gene_synonym="ECK4500" /db_xref="EcoGene:EG14490" CDS complement(3170580..3170660) /gene="yrbN" /locus_tag="b4685" /gene_synonym="ECK4500" /codon_start=1 /transl_table=11 /product="uncharacterized protein" /protein_id="ACO60010.1" /db_xref="GI:226510977" /db_xref="UniProtKB/Swiss-Prot:C1P618" /db_xref="EcoGene:EG14490" /translation="MKIADQFHDELCRLAAINFEAHVLHG" gene complement(3170767..3171651) /gene="nlpI" /locus_tag="b3163" /gene_synonym="ECK3151" /gene_synonym="JW3132" /gene_synonym="yhbM" /db_xref="EcoGene:EG12371" CDS complement(3170767..3171651) /gene="nlpI" /locus_tag="b3163" /gene_synonym="ECK3151" /gene_synonym="JW3132" /gene_synonym="yhbM" /function="putative regulator; Not classified" /codon_start=1 /transl_table=11 /product="lipoprotein involved in osmotic sensitivity and filamentation" /protein_id="AAC76197.1" /db_xref="GI:1789554" /db_xref="ASAP:ABE-0010395" /db_xref="UniProtKB/Swiss-Prot:P0AFB1" /db_xref="EcoGene:EG12371" /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL ELSLLGQDQDDLAESDQQ" gene complement(3171760..3173895) /gene="pnp" /locus_tag="b3164" /gene_synonym="bfl" /gene_synonym="ECK3152" /gene_synonym="JW5851" /db_xref="EcoGene:EG10743" CDS complement(3171760..3173895) /gene="pnp" /locus_tag="b3164" /gene_synonym="bfl" /gene_synonym="ECK3152" /gene_synonym="JW5851" /EC_number="2.7.7.8" /function="enzyme; RNA synthesis, modification, DNA transcription" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="polynucleotide phosphorylase; cytidylate kinase activity; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006401 - RNA catabolic process" /codon_start=1 /transl_table=11 /product="polynucleotide phosphorylase/polyadenylase" /protein_id="AAC76198.2" /db_xref="GI:145693187" /db_xref="ASAP:ABE-0010397" /db_xref="UniProtKB/Swiss-Prot:P05055" /db_xref="EcoGene:EG10743" /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQN INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM VGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMD IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ GRIRLSIKEATEQSQPAAAPEAPAAEQGE" gene 3173952..3174125 /gene="psrO" /locus_tag="b4449" /gene_synonym="ECK3153" /gene_synonym="JWR0253" /gene_synonym="p3" /gene_synonym="psrA15" /gene_synonym="sraG" /db_xref="EcoGene:EG31162" ncRNA 3173952..3174125 /ncRNA_class="other" /gene="psrO" /locus_tag="b4449" /gene_synonym="ECK3153" /gene_synonym="JWR0253" /gene_synonym="p3" /gene_synonym="psrA15" /gene_synonym="sraG" /product="novel sRNA, function unknown" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047269" /db_xref="EcoGene:EG31162" gene complement(3174142..3174411) /gene="rpsO" /locus_tag="b3165" /gene_synonym="ECK3154" /gene_synonym="JW3134" /gene_synonym="secC" /db_xref="EcoGene:EG10914" CDS complement(3174142..3174411) /gene="rpsO" /locus_tag="b3165" /gene_synonym="ECK3154" /gene_synonym="JW3134" /gene_synonym="secC" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S15" /protein_id="AAC76199.1" /db_xref="GI:1789556" /db_xref="ASAP:ABE-0010401" /db_xref="UniProtKB/Swiss-Prot:P0ADZ4" /db_xref="EcoGene:EG10914" /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR" gene complement(3174560..3175504) /gene="truB" /locus_tag="b3166" /gene_synonym="ECK3155" /gene_synonym="JW3135" /gene_synonym="yhbA" /db_xref="EcoGene:EG11177" CDS complement(3174560..3175504) /gene="truB" /locus_tag="b3166" /gene_synonym="ECK3155" /gene_synonym="JW3135" /gene_synonym="yhbA" /EC_number="4.2.1.70" /function="enzyme; tRNA modification" /note="tRNA pseudouridine 5S synthase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase" /protein_id="AAC76200.1" /db_xref="GI:2367200" /db_xref="ASAP:ABE-0010404" /db_xref="UniProtKB/Swiss-Prot:P60340" /db_xref="EcoGene:EG11177" /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLF IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA" gene complement(3175504..3175905) /gene="rbfA" /locus_tag="b3167" /gene_synonym="ECK3156" /gene_synonym="JW3136" /gene_synonym="sdr-43" /gene_synonym="yhbB" /db_xref="EcoGene:EG11178" CDS complement(3175504..3175905) /gene="rbfA" /locus_tag="b3167" /gene_synonym="ECK3156" /gene_synonym="JW3136" /gene_synonym="sdr-43" /gene_synonym="yhbB" /function="factor; Proteins - translation and modification" /note="ribosome-binding factor A; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="30s ribosome binding factor" /protein_id="AAC76201.1" /db_xref="GI:1789558" /db_xref="ASAP:ABE-0010406" /db_xref="UniProtKB/Swiss-Prot:P0A7G2" /db_xref="EcoGene:EG11178" /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS LVEGMRMSNLVTSVVKHDEERRVNPDDSKED" repeat_region 3175979..3176055 /note="REP242 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3176069..3178741) /gene="infB" /locus_tag="b3168" /gene_synonym="ECK3157" /gene_synonym="gicD" /gene_synonym="JW3137" /gene_synonym="ssyG" /db_xref="EcoGene:EG10505" CDS complement(3176069..3178741) /gene="infB" /locus_tag="b3168" /gene_synonym="ECK3157" /gene_synonym="gicD" /gene_synonym="JW3137" /gene_synonym="ssyG" /function="factor; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 3894004" /note="protein chain initiation factor IF-2; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="AAC76202.1" /db_xref="GI:1789559" /db_xref="ASAP:ABE-0010410" /db_xref="UniProtKB/Swiss-Prot:P0A705" /db_xref="EcoGene:EG10505" /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL AAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSN QQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDN AEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADRE EARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIK AMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAP VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAA FTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPD RVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMAS GAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSI PVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMT EGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASN AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLA EVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVR NGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA" gene complement(3178766..3180253) /gene="nusA" /locus_tag="b3169" /gene_synonym="ECK3158" /gene_synonym="JW3138" /db_xref="EcoGene:EG10665" CDS complement(3178766..3180253) /gene="nusA" /locus_tag="b3169" /gene_synonym="ECK3158" /gene_synonym="JW3138" /function="factor; RNA synthesis, modification, DNA transcription" /experiment="N-terminus verified by Edman degradation: PMID 1847365,6364142,9298646" /note="transcription pausing; L factor; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="transcription termination/antitermination L factor" /protein_id="AAC76203.1" /db_xref="GI:1789560" /db_xref="ASAP:ABE-0010413" /db_xref="UniProtKB/Swiss-Prot:P0AFF6" /db_xref="EcoGene:EG10665" /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEA VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAA RGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA" gene complement(3180281..3180733) /gene="rimP" /locus_tag="b3170" /gene_synonym="ECK3159" /gene_synonym="JW5533" /gene_synonym="yhbC" /db_xref="EcoGene:EG11179" CDS complement(3180281..3180733) /gene="rimP" /locus_tag="b3170" /gene_synonym="ECK3159" /gene_synonym="JW5533" /gene_synonym="yhbC" /codon_start=1 /transl_table=11 /product="ribosome maturation factor for 30S subunits" /protein_id="AAC76204.4" /db_xref="GI:226510978" /db_xref="ASAP:ABE-0010417" /db_xref="UniProtKB/Swiss-Prot:P0A8A8" /db_xref="EcoGene:EG11179" /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF" gene complement(3180940..3181016) /gene="metY" /locus_tag="b3171" /gene_synonym="ECK3160" /gene_synonym="JWR0071" /db_xref="EcoGene:EG30061" tRNA complement(3180940..3181016) /gene="metY" /locus_tag="b3171" /gene_synonym="ECK3160" /gene_synonym="JWR0071" /product="tRNA-Met" /note="anticodon: CAU" /db_xref="ASAP:ABE-0010420" /db_xref="EcoGene:EG30061" gene 3181364..3182707 /gene="argG" /locus_tag="b3172" /gene_synonym="Arg6" /gene_synonym="argE" /gene_synonym="ECK3161" /gene_synonym="JW3140" /db_xref="EcoGene:EG10068" CDS 3181364..3182707 /gene="argG" /locus_tag="b3172" /gene_synonym="Arg6" /gene_synonym="argE" /gene_synonym="ECK3161" /gene_synonym="JW3140" /EC_number="6.3.4.5" /function="enzyme; Amino acid biosynthesis: Arginine" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006526 - arginine biosynthetic process" /codon_start=1 /transl_table=11 /product="argininosuccinate synthetase" /protein_id="AAC76205.1" /db_xref="GI:1789563" /db_xref="ASAP:ABE-0010428" /db_xref="UniProtKB/Swiss-Prot:P0A6E4" /db_xref="EcoGene:EG10068" /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMS DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSAASGVPQVENLENKGQ" gene complement(3182715..3184340) /gene="yhbX" /locus_tag="b3173" /gene_synonym="ECK3162" /gene_synonym="JW5534" /db_xref="EcoGene:EG12793" CDS complement(3182715..3184340) /gene="yhbX" /locus_tag="b3173" /gene_synonym="ECK3162" /gene_synonym="JW5534" /function="putative enzyme; Not classified" /note="putative alkaline phosphatase I; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="putative EptAB family phosphoethanolamine transferase, inner membrane protein" /protein_id="AAC76206.2" /db_xref="GI:87082223" /db_xref="ASAP:ABE-0010430" /db_xref="UniProtKB/Swiss-Prot:P42640" /db_xref="EcoGene:EG12793" /translation="MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP DEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ FAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVP LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV PMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS RVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG" gene complement(3184799..3184885) /gene="leuU" /locus_tag="b3174" /gene_synonym="ECK3163" /gene_synonym="JWR0072" /db_xref="EcoGene:EG30050" tRNA complement(3184799..3184885) /gene="leuU" /locus_tag="b3174" /gene_synonym="ECK3163" /gene_synonym="JWR0072" /product="tRNA-Leu" /note="anticodon: UAG" /db_xref="ASAP:ABE-0010434" /db_xref="EcoGene:EG30050" gene complement(3184900..3185232) /gene="secG" /locus_tag="b3175" /gene_synonym="ECK3164" /gene_synonym="JW3142" /gene_synonym="prlH" /db_xref="EcoGene:EG12095" CDS complement(3184900..3185232) /gene="secG" /locus_tag="b3175" /gene_synonym="ECK3164" /gene_synonym="JW3142" /gene_synonym="prlH" /function="transport; Protein, peptide secretion" /note="protein export - membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="preprotein translocase membrane subunit" /protein_id="AAC76207.1" /db_xref="GI:1789565" /db_xref="ASAP:ABE-0010436" /db_xref="UniProtKB/Swiss-Prot:P0AG99" /db_xref="EcoGene:EG12095" /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA KPTSDIPN" gene complement(3185460..3186797) /gene="glmM" /locus_tag="b3176" /gene_synonym="ECK3165" /gene_synonym="JW3143" /gene_synonym="mrsA" /gene_synonym="yhbF" /db_xref="EcoGene:EG11553" CDS complement(3185460..3186797) /gene="glmM" /locus_tag="b3176" /gene_synonym="ECK3165" /gene_synonym="JW3143" /gene_synonym="mrsA" /gene_synonym="yhbF" /EC_number="5.4.2.10" /function="putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0009243 - O antigen biosynthetic process; GO_process: GO:0009246 - enterobacterial common antigen biosynthetic process; GO_process: GO:0006006 - glucose metabolic process; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="AAC76208.1" /db_xref="GI:1789566" /db_xref="ASAP:ABE-0010439" /db_xref="UniProtKB/Swiss-Prot:P31120" /db_xref="EcoGene:EG11553" /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV" gene complement(3186790..3187638) /gene="folP" /locus_tag="b3177" /gene_synonym="dhpS" /gene_synonym="ECK3166" /gene_synonym="JW3144" /db_xref="EcoGene:EG50011" CDS complement(3186790..3187638) /gene="folP" /locus_tag="b3177" /gene_synonym="dhpS" /gene_synonym="ECK3166" /gene_synonym="JW3144" /EC_number="2.5.1.15" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /experiment="N-terminus verified by Edman degradation: PMID 1657875" /note="GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="7,8-dihydropteroate synthase" /protein_id="AAC76209.2" /db_xref="GI:87082224" /db_xref="ASAP:ABE-0010441" /db_xref="UniProtKB/Swiss-Prot:P0AC13" /db_xref="EcoGene:EG50011" /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEV IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK ENKRYE" gene complement(3187728..3189662) /gene="ftsH" /locus_tag="b3178" /gene_synonym="ECK3167" /gene_synonym="hflB" /gene_synonym="JW3145" /gene_synonym="mrsC" /gene_synonym="std" /gene_synonym="tolZ" /db_xref="EcoGene:EG11506" CDS complement(3187728..3189662) /gene="ftsH" /locus_tag="b3178" /gene_synonym="ECK3167" /gene_synonym="hflB" /gene_synonym="JW3145" /gene_synonym="mrsC" /gene_synonym="std" /gene_synonym="tolZ" /EC_number="3.4.24.-" /function="enzyme; Degradation of proteins, peptides, glyco" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="protease, ATP-dependent zinc-metallo" /protein_id="AAC76210.1" /db_xref="GI:1789568" /db_xref="ASAP:ABE-0010444" /db_xref="UniProtKB/Swiss-Prot:P0AAI3" /db_xref="EcoGene:EG11506" /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP VDEPRTPNPGNTMSEQLGDK" gene complement(3189762..3190391) /gene="rlmE" /locus_tag="b3179" /gene_synonym="ECK3168" /gene_synonym="ftsJ" /gene_synonym="JW3146" /gene_synonym="mrsF" /gene_synonym="rrmJ" /db_xref="EcoGene:EG11507" CDS complement(3189762..3190391) /gene="rlmE" /locus_tag="b3179" /gene_synonym="ECK3168" /gene_synonym="ftsJ" /gene_synonym="JW3146" /gene_synonym="mrsF" /gene_synonym="rrmJ" /EC_number="2.1.1.-" /function="enzyme; rRNA modification; phenotype; Cell division" /codon_start=1 /transl_table=11 /product="23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent" /protein_id="AAC76211.1" /db_xref="GI:1789569" /db_xref="ASAP:ABE-0010447" /db_xref="UniProtKB/Swiss-Prot:P0C0R7" /db_xref="EcoGene:EG11507" /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP" gene 3190517..3190810 /gene="yhbY" /locus_tag="b3180" /gene_synonym="ECK3169" /gene_synonym="JW3147" /db_xref="EcoGene:EG12794" CDS 3190517..3190810 /gene="yhbY" /locus_tag="b3180" /gene_synonym="ECK3169" /gene_synonym="JW3147" /codon_start=1 /transl_table=11 /product="RNA binding protein associated with pre-50S ribosomal subunits" /protein_id="AAC76212.1" /db_xref="GI:1789570" /db_xref="ASAP:ABE-0010452" /db_xref="UniProtKB/Swiss-Prot:P0AGK4" /db_xref="EcoGene:EG12794" /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR" gene complement(3190966..3191442) /gene="greA" /locus_tag="b3181" /gene_synonym="ECK3170" /gene_synonym="JW3148" /db_xref="EcoGene:EG10415" CDS complement(3190966..3191442) /gene="greA" /locus_tag="b3181" /gene_synonym="ECK3170" /gene_synonym="JW3148" /function="regulator; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 1384037" /note="transcription elongation factor: cleaves 3' nucleotide of paused mRNA; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="transcript cleavage factor" /protein_id="AAC76213.2" /db_xref="GI:87082225" /db_xref="ASAP:ABE-0010454" /db_xref="UniProtKB/Swiss-Prot:P0A6W5" /db_xref="EcoGene:EG10415" /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL" gene 3191690..3193123 /gene="dacB" /locus_tag="b3182" /gene_synonym="ECK3171" /gene_synonym="JW3149" /db_xref="EcoGene:EG10202" CDS 3191690..3193123 /gene="dacB" /locus_tag="b3182" /gene_synonym="ECK3171" /gene_synonym="JW3149" /EC_number="3.4.16.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="AAC76214.1" /db_xref="GI:1789573" /db_xref="ASAP:ABE-0010458" /db_xref="UniProtKB/Swiss-Prot:P24228" /db_xref="EcoGene:EG10202" /translation="MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVG ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV EPADQRNRRIPLVRFESRLYKDIYQNN" repeat_region 3193187..3193284 /note="RIP243 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(3193309..3194481) /gene="obgE" /locus_tag="b3183" /gene_synonym="cgtA" /gene_synonym="ECK3172" /gene_synonym="JW3150" /gene_synonym="obg" /gene_synonym="yhbZ" /db_xref="EcoGene:EG12795" CDS complement(3193309..3194481) /gene="obgE" /locus_tag="b3183" /gene_synonym="cgtA" /gene_synonym="ECK3172" /gene_synonym="JW3150" /gene_synonym="obg" /gene_synonym="yhbZ" /function="putative factor; Not classified" /note="putative GTP-binding factor" /codon_start=1 /transl_table=11 /product="GTPase involved in cell partioning and DNA repair" /protein_id="AAC76215.1" /db_xref="GI:1789574" /db_xref="ASAP:ABE-0010462" /db_xref="UniProtKB/Swiss-Prot:P42641" /db_xref="EcoGene:EG12795" /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR" gene complement(3194497..3195462) /gene="yhbE" /locus_tag="b3184" /gene_synonym="ECK3173" /gene_synonym="JW3151" /db_xref="EcoGene:EG11499" CDS complement(3194497..3195462) /gene="yhbE" /locus_tag="b3184" /gene_synonym="ECK3173" /gene_synonym="JW3151" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="EamA family inner membrane putative transporter" /protein_id="AAC76216.1" /db_xref="GI:1789575" /db_xref="ASAP:ABE-0010464" /db_xref="UniProtKB/Swiss-Prot:P0AA73" /db_xref="EcoGene:EG11499" /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE" gene complement(3195589..3195846) /gene="rpmA" /locus_tag="b3185" /gene_synonym="ECK3174" /gene_synonym="JW3152" /gene_synonym="rpz" /db_xref="EcoGene:EG50002" CDS complement(3195589..3195846) /gene="rpmA" /locus_tag="b3185" /gene_synonym="ECK3174" /gene_synonym="JW3152" /gene_synonym="rpz" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L27" /protein_id="AAC76217.1" /db_xref="GI:1789576" /db_xref="ASAP:ABE-0010468" /db_xref="UniProtKB/Swiss-Prot:P0A7L8" /db_xref="EcoGene:EG50002" /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE" gene complement(3195867..3196178) /gene="rplU" /locus_tag="b3186" /gene_synonym="ECK3175" /gene_synonym="JW3153" /db_xref="EcoGene:EG50001" CDS complement(3195867..3196178) /gene="rplU" /locus_tag="b3186" /gene_synonym="ECK3175" /gene_synonym="JW3153" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 387076,8740179" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L21" /protein_id="AAC76218.1" /db_xref="GI:1789577" /db_xref="ASAP:ABE-0010470" /db_xref="UniProtKB/Swiss-Prot:P0AG48" /db_xref="EcoGene:EG50001" /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS A" gene 3196437..3197408 /gene="ispB" /locus_tag="b3187" /gene_synonym="cel" /gene_synonym="ECK3176" /gene_synonym="JW3154" /gene_synonym="yhbD" /db_xref="EcoGene:EG10017" CDS 3196437..3197408 /gene="ispB" /locus_tag="b3187" /gene_synonym="cel" /gene_synonym="ECK3176" /gene_synonym="JW3154" /gene_synonym="yhbD" /EC_number="2.5.1.-" /function="enzyme; Biosynthesis of cofactors, carriers: Menaquinone, ubiquinone" /codon_start=1 /transl_table=11 /product="octaprenyl diphosphate synthase" /protein_id="AAC76219.1" /db_xref="GI:1789578" /db_xref="ASAP:ABE-0010474" /db_xref="UniProtKB/Swiss-Prot:P0AD57" /db_xref="EcoGene:EG10017" /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR" gene 3197636..3197914 /gene="sfsB" /locus_tag="b3188" /gene_synonym="ECK3177" /gene_synonym="JW3155" /gene_synonym="nlp" /gene_synonym="sfs7" /db_xref="EcoGene:EG10656" CDS 3197636..3197914 /gene="sfsB" /locus_tag="b3188" /gene_synonym="ECK3177" /gene_synonym="JW3155" /gene_synonym="nlp" /gene_synonym="sfs7" /function="regulator; Degradation of small molecules: Carbon compounds" /note="regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="malPQ operon transcriptional activator" /protein_id="AAC76220.1" /db_xref="GI:1789579" /db_xref="ASAP:ABE-0010477" /db_xref="UniProtKB/Swiss-Prot:P0ACH1" /db_xref="EcoGene:EG10656" /translation="MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSR PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK" gene complement(3197962..3199221) /gene="murA" /locus_tag="b3189" /gene_synonym="ECK3178" /gene_synonym="JW3156" /gene_synonym="mrbA" /gene_synonym="murZ" /db_xref="EcoGene:EG11358" CDS complement(3197962..3199221) /gene="murA" /locus_tag="b3189" /gene_synonym="ECK3178" /gene_synonym="JW3156" /gene_synonym="mrbA" /gene_synonym="murZ" /EC_number="2.5.1.7" /function="enzyme; Murein sacculus, peptidoglycan" /experiment="N-terminus verified by Edman degradation: PMID 1512209" /note="first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="AAC76221.1" /db_xref="GI:1789580" /db_xref="ASAP:ABE-0010479" /db_xref="UniProtKB/Swiss-Prot:P0A749" /db_xref="EcoGene:EG11358" /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI YHIDRGYERIEDKLRALGANIERVKGE" gene complement(3199276..3199530) /gene="ibaG" /locus_tag="b3190" /gene_synonym="ECK3179" /gene_synonym="JW3157" /gene_synonym="yrbA" /db_xref="EcoGene:EG12796" CDS complement(3199276..3199530) /gene="ibaG" /locus_tag="b3190" /gene_synonym="ECK3179" /gene_synonym="JW3157" /gene_synonym="yrbA" /note="GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="acid stress protein; putative BolA family transcriptional regulator" /protein_id="AAC76222.2" /db_xref="GI:87082226" /db_xref="ASAP:ABE-0010481" /db_xref="UniProtKB/Swiss-Prot:P0A9W6" /db_xref="EcoGene:EG12796" /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF" repeat_region 3199646..3199679 /note="REP244 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3199690..3199983) /gene="mlaB" /locus_tag="b3191" /gene_synonym="ECK3180" /gene_synonym="JW5535" /gene_synonym="yrbB" /db_xref="EcoGene:EG12797" CDS complement(3199690..3199983) /gene="mlaB" /locus_tag="b3191" /gene_synonym="ECK3180" /gene_synonym="JW5535" /gene_synonym="yrbB" /function="transport; Transport of small molecules: phospholipids" /codon_start=1 /transl_table=11 /product="ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component" /protein_id="AAC76223.2" /db_xref="GI:87082227" /db_xref="ASAP:ABE-0010487" /db_xref="UniProtKB/Swiss-Prot:P64602" /db_xref="EcoGene:EG12797" /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR" gene complement(3199983..3200618) /gene="mlaC" /locus_tag="b3192" /gene_synonym="ECK3181" /gene_synonym="JW3159" /gene_synonym="yrbC" /db_xref="EcoGene:EG12798" CDS complement(3199983..3200618) /gene="mlaC" /locus_tag="b3192" /gene_synonym="ECK3181" /gene_synonym="JW3159" /gene_synonym="yrbC" /function="transport; Transport of small molecules: phospholipids" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein" /protein_id="AAC76224.1" /db_xref="GI:1789583" /db_xref="ASAP:ABE-0010489" /db_xref="UniProtKB/Swiss-Prot:P0ADV7" /db_xref="EcoGene:EG12798" /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK" gene complement(3200637..3201188) /gene="mlaD" /locus_tag="b3193" /gene_synonym="ECK3182" /gene_synonym="JW3160" /gene_synonym="vpsC" /gene_synonym="yrbD" /db_xref="EcoGene:EG12799" CDS complement(3200637..3201188) /gene="mlaD" /locus_tag="b3193" /gene_synonym="ECK3182" /gene_synonym="JW3160" /gene_synonym="vpsC" /gene_synonym="yrbD" /function="transport; Transport of small molecules: phospholipids" /codon_start=1 /transl_table=11 /product="OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein" /protein_id="AAC76225.1" /db_xref="GI:1789584" /db_xref="ASAP:ABE-0010493" /db_xref="UniProtKB/Swiss-Prot:P64604" /db_xref="EcoGene:EG12799" /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK NSGDAPAAAPGNNETTEPVGTTK" gene complement(3201193..3201975) /gene="mlaE" /locus_tag="b3194" /gene_synonym="ECK3183" /gene_synonym="JW3161" /gene_synonym="vpsB" /gene_synonym="yrbE" /db_xref="EcoGene:EG12800" CDS complement(3201193..3201975) /gene="mlaE" /locus_tag="b3194" /gene_synonym="ECK3183" /gene_synonym="JW3161" /gene_synonym="vpsB" /gene_synonym="yrbE" /function="transport; Transport of small molecules: phospholipids" /codon_start=1 /transl_table=11 /product="ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein" /protein_id="AAC76226.1" /db_xref="GI:1789585" /db_xref="ASAP:ABE-0010495" /db_xref="UniProtKB/Swiss-Prot:P64606" /db_xref="EcoGene:EG12800" /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN" gene complement(3201983..3202792) /gene="mlaF" /locus_tag="b3195" /gene_synonym="ECK3184" /gene_synonym="JW3162" /gene_synonym="vpsA" /gene_synonym="yrbF" /db_xref="EcoGene:EG12801" CDS complement(3201983..3202792) /gene="mlaF" /locus_tag="b3195" /gene_synonym="ECK3184" /gene_synonym="JW3162" /gene_synonym="vpsA" /gene_synonym="yrbF" /function="transport; Transport of small molecules: phospholipids" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="ABC transporter maintaining OM lipid asymmetry, ATP-binding protein" /protein_id="AAC76227.1" /db_xref="GI:1789586" /db_xref="ASAP:ABE-0010498" /db_xref="UniProtKB/Swiss-Prot:P63386" /db_xref="EcoGene:EG12801" /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS" gene 3203002..3203979 /gene="yrbG" /locus_tag="b3196" /gene_synonym="ECK3185" /gene_synonym="JW3163" /db_xref="EcoGene:EG12802" CDS 3203002..3203979 /gene="yrbG" /locus_tag="b3196" /gene_synonym="ECK3185" /gene_synonym="JW3163" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0005432 - calcium:sodium antiporter activity" /codon_start=1 /transl_table=11 /product="putative calcium/sodium:proton antiporter" /protein_id="AAC76228.1" /db_xref="GI:1789587" /db_xref="ASAP:ABE-0010502" /db_xref="UniProtKB/Swiss-Prot:P45394" /db_xref="EcoGene:EG12802" /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV VSIGTSLPEVIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE" gene 3203993..3204979 /gene="kdsD" /locus_tag="b3197" /gene_synonym="ECK3186" /gene_synonym="JW3164" /gene_synonym="yrbH" /db_xref="EcoGene:EG12803" CDS 3203993..3204979 /gene="kdsD" /locus_tag="b3197" /gene_synonym="ECK3186" /gene_synonym="JW3164" /gene_synonym="yrbH" /EC_number="5.3.1.13" /function="putative enzyme; Not classified" /note="putative isomerase" /codon_start=1 /transl_table=11 /product="D-arabinose 5-phosphate isomerase" /protein_id="AAC76229.1" /db_xref="GI:1789588" /db_xref="ASAP:ABE-0010504" /db_xref="UniProtKB/Swiss-Prot:P45395" /db_xref="EcoGene:EG12803" /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV" gene 3205000..3205566 /gene="kdsC" /locus_tag="b3198" /gene_synonym="ECK3187" /gene_synonym="JW3165" /gene_synonym="yrbI" /gene_synonym="yrbJ" /db_xref="EcoGene:EG12804" CDS 3205000..3205566 /gene="kdsC" /locus_tag="b3198" /gene_synonym="ECK3187" /gene_synonym="JW3165" /gene_synonym="yrbI" /gene_synonym="yrbJ" /EC_number="3.1.3.45" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" /protein_id="AAC76230.1" /db_xref="GI:2367202" /db_xref="ASAP:ABE-0010506" /db_xref="UniProtKB/Swiss-Prot:P0ABZ4" /db_xref="EcoGene:EG12804" /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK LIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA GGRGAVREVCDLLLLAQGKLDEAKGQSI" gene 3205563..3206138 /gene="lptC" /locus_tag="b3199" /gene_synonym="ECK3188" /gene_synonym="JW3166" /gene_synonym="yrbK" /db_xref="EcoGene:EG12806" CDS 3205563..3206138 /gene="lptC" /locus_tag="b3199" /gene_synonym="ECK3188" /gene_synonym="JW3166" /gene_synonym="yrbK" /codon_start=1 /transl_table=11 /product="periplasmic membrane-anchored LPS-binding protein; LPS export protein" /protein_id="AAC76231.1" /db_xref="GI:1789591" /db_xref="ASAP:ABE-0010508" /db_xref="UniProtKB/Swiss-Prot:P0ADV9" /db_xref="EcoGene:EG12806" /translation="MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP" gene 3206107..3206664 /gene="lptA" /locus_tag="b3200" /gene_synonym="ECK3189" /gene_synonym="JW3167" /gene_synonym="yhbN" /db_xref="EcoGene:EG12618" CDS 3206107..3206664 /gene="lptA" /locus_tag="b3200" /gene_synonym="ECK3189" /gene_synonym="JW3167" /gene_synonym="yhbN" /function="lipopolysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="lipopolysaccharide export ABC transporter periplasmic binding protein; Lipid A binding protein; LPS export and assembly protein" /protein_id="AAC76232.1" /db_xref="GI:1789592" /db_xref="ASAP:ABE-0010510" /db_xref="UniProtKB/Swiss-Prot:P0ADV1" /db_xref="EcoGene:EG12618" /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV TTVLVPSQLQDKNNKGQTPAQKKGN" gene 3206671..3207396 /gene="lptB" /locus_tag="b3201" /gene_synonym="ECK3190" /gene_synonym="JW3168" /gene_synonym="yhbG" /db_xref="EcoGene:EG11680" CDS 3206671..3207396 /gene="lptB" /locus_tag="b3201" /gene_synonym="ECK3190" /gene_synonym="JW3168" /gene_synonym="yhbG" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="lipopolysaccharide export ABC transporter ATPase" /protein_id="AAC76233.1" /db_xref="GI:1789593" /db_xref="ASAP:ABE-0010512" /db_xref="UniProtKB/Swiss-Prot:P0A9V1" /db_xref="EcoGene:EG11680" /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH GTPTEILQDEHVKRVYLGEDFRL" gene 3207444..3208877 /gene="rpoN" /locus_tag="b3202" /gene_synonym="ECK3191" /gene_synonym="glnF" /gene_synonym="JW3169" /gene_synonym="ntrA" /db_xref="EcoGene:EG10898" CDS 3207444..3208877 /gene="rpoN" /locus_tag="b3202" /gene_synonym="ECK3191" /gene_synonym="glnF" /gene_synonym="JW3169" /gene_synonym="ntrA" /function="regulator; Global regulatory functions" /note="RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 54 (sigma N) factor" /protein_id="AAC76234.1" /db_xref="GI:1789594" /db_xref="ASAP:ABE-0010514" /db_xref="UniProtKB/Swiss-Prot:P24255" /db_xref="EcoGene:EG10898" /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN PLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLED ILESIGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG IMVARRTVAKYRESLSIPPSNQRKQLV" gene 3208900..3209187 /gene="hpf" /locus_tag="b3203" /gene_synonym="ECK3192" /gene_synonym="JW3170" /gene_synonym="yhbH" /db_xref="EcoGene:EG11681" CDS 3208900..3209187 /gene="hpf" /locus_tag="b3203" /gene_synonym="ECK3192" /gene_synonym="JW3170" /gene_synonym="yhbH" /function="putative regulator; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 11168583" /note="probable sigma-54 modulation protein; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="ribosome hibernation promoting factor HPF; stabilizes 100S dimers" /protein_id="AAC76235.1" /db_xref="GI:1789595" /db_xref="ASAP:ABE-0010516" /db_xref="UniProtKB/Swiss-Prot:P0AFX0" /db_xref="EcoGene:EG11681" /translation="MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVE KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH" gene 3209305..3209796 /gene="ptsN" /locus_tag="b3204" /gene_synonym="ECK3193" /gene_synonym="JW3171" /gene_synonym="rpoP" /gene_synonym="yhbI" /db_xref="EcoGene:EG11682" CDS 3209305..3209796 /gene="ptsN" /locus_tag="b3204" /gene_synonym="ECK3193" /gene_synonym="JW3171" /gene_synonym="rpoP" /gene_synonym="yhbI" /EC_number="2.7.1.69" /function="enzyme; Transport of small molecules: Amino acids, amines" /note="phosphotransferase system enzyme IIA, regulates N metabolism" /codon_start=1 /transl_table=11 /product="sugar-specific enzyme IIA component of PTS" /protein_id="AAC76236.1" /db_xref="GI:1789597" /db_xref="ASAP:ABE-0010520" /db_xref="UniProtKB/Swiss-Prot:P69829" /db_xref="EcoGene:EG11682" /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP DEA" gene 3209842..3210696 /gene="yhbJ" /locus_tag="b3205" /gene_synonym="ECK3194" /gene_synonym="JW3172" /gene_synonym="rapZ" /db_xref="EcoGene:EG12146" CDS 3209842..3210696 /gene="yhbJ" /locus_tag="b3205" /gene_synonym="ECK3194" /gene_synonym="JW3172" /gene_synonym="rapZ" /codon_start=1 /transl_table=11 /product="adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase" /protein_id="AAC76237.1" /db_xref="GI:1789598" /db_xref="ASAP:ABE-0010522" /db_xref="UniProtKB/Swiss-Prot:P0A894" /db_xref="EcoGene:EG12146" /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH RTLEKRKP" gene 3210693..3210965 /gene="npr" /locus_tag="b3206" /gene_synonym="ECK3195" /gene_synonym="JW3173" /gene_synonym="ptsO" /gene_synonym="rpoR" /gene_synonym="yhbK" /db_xref="EcoGene:EG12147" CDS 3210693..3210965 /gene="npr" /locus_tag="b3206" /gene_synonym="ECK3195" /gene_synonym="JW3173" /gene_synonym="ptsO" /gene_synonym="rpoR" /gene_synonym="yhbK" /function="transport; Transport of small molecules: Other" /note="phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)" /protein_id="AAC76238.1" /db_xref="GI:1789599" /db_xref="ASAP:ABE-0010524" /db_xref="UniProtKB/Swiss-Prot:P0A9N0" /db_xref="EcoGene:EG12147" /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED" gene 3211179..3211811 /gene="yrbL" /locus_tag="b3207" /gene_synonym="ECK3196" /gene_synonym="JW3174" /db_xref="EcoGene:EG12807" CDS 3211179..3211811 /gene="yrbL" /locus_tag="b3207" /gene_synonym="ECK3196" /gene_synonym="JW3174" /codon_start=1 /transl_table=11 /product="Mg(2+)-starvation-stimulated protein" /protein_id="AAC76239.1" /db_xref="GI:1789600" /db_xref="ASAP:ABE-0010528" /db_xref="UniProtKB/Swiss-Prot:P64610" /db_xref="EcoGene:EG12807" /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR RELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLI PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA" gene complement(3211808..3212536) /gene="mtgA" /locus_tag="b3208" /gene_synonym="ECK3197" /gene_synonym="JW3175" /gene_synonym="mgt" /gene_synonym="yrbM" /db_xref="EcoGene:EG12808" CDS complement(3211808..3212536) /gene="mtgA" /locus_tag="b3208" /gene_synonym="ECK3197" /gene_synonym="JW3175" /gene_synonym="mgt" /gene_synonym="yrbM" /EC_number="2.4.2.-" /function="putative enzyme; Not classified" /note="putative peptidoglycan enzyme; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="biosynthetic peptidoglycan transglycosylase" /protein_id="AAC76240.1" /db_xref="GI:1789601" /db_xref="ASAP:ABE-0010530" /db_xref="UniProtKB/Swiss-Prot:P46022" /db_xref="EcoGene:EG12808" /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEKA LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS RQAWILRQMYQLGGEPFMQQHQLD" gene complement(3212533..3213186) /gene="elbB" /locus_tag="b3209" /gene_synonym="ECK3198" /gene_synonym="elb2" /gene_synonym="JW3176" /gene_synonym="yhbL" /gene_synonym="yzzB" /db_xref="EcoGene:EG11383" CDS complement(3212533..3213186) /gene="elbB" /locus_tag="b3209" /gene_synonym="ECK3198" /gene_synonym="elb2" /gene_synonym="JW3176" /gene_synonym="yhbL" /gene_synonym="yzzB" /function="putative factor; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 1575737" /note="sigma cross-reacting protein 27A (SCRP-27A)" /codon_start=1 /transl_table=11 /product="isoprenoid biosynthesis protein with amidotransferase-like domain" /protein_id="AAC76241.2" /db_xref="GI:87082228" /db_xref="ASAP:ABE-0010532" /db_xref="UniProtKB/Swiss-Prot:P0ABU5" /db_xref="EcoGene:EG11383" /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS NFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE" gene 3213304..3213424 /gene="arcZ" /locus_tag="b4450" /gene_synonym="ECK3199" /gene_synonym="JWR0254" /gene_synonym="psrA16" /gene_synonym="ryhA" /gene_synonym="sraH" /db_xref="EcoGene:EG31163" ncRNA 3213304..3213424 /ncRNA_class="antisense_RNA" /gene="arcZ" /locus_tag="b4450" /gene_synonym="ECK3199" /gene_synonym="JWR0254" /gene_synonym="psrA16" /gene_synonym="ryhA" /gene_synonym="sraH" /product="sRNA positive antisense regulator of rpoS; binds Hfq" /note="identified in a large scale screen" /db_xref="ASAP:ABE-0047270" /db_xref="EcoGene:EG31163" gene complement(3213416..3215752) /gene="arcB" /locus_tag="b3210" /gene_synonym="ECK3200" /gene_synonym="JW5536" /db_xref="EcoGene:EG10062" CDS complement(3213416..3215752) /gene="arcB" /locus_tag="b3210" /gene_synonym="ECK3200" /gene_synonym="JW5536" /function="enzyme; Global regulatory functions" /note="aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009060 - aerobic respiration; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB" /protein_id="AAT48172.1" /db_xref="GI:48994928" /db_xref="ASAP:ABE-0010537" /db_xref="UniProtKB/Swiss-Prot:P0AEC3" /db_xref="EcoGene:EG10062" /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK" gene complement(3215848..3216777) /gene="yhcC" /locus_tag="b3211" /gene_synonym="ECK3201" /gene_synonym="JW3178" /db_xref="EcoGene:EG12809" CDS complement(3215848..3216777) /gene="yhcC" /locus_tag="b3211" /gene_synonym="ECK3201" /gene_synonym="JW3178" /codon_start=1 /transl_table=11 /product="putative Fe-S oxidoreductase, Radical SAM superfamily protein" /protein_id="AAC76243.1" /db_xref="GI:2367204" /db_xref="ASAP:ABE-0010540" /db_xref="UniProtKB/Swiss-Prot:P0ADW6" /db_xref="EcoGene:EG12809" /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE" gene 3217452..3221912 /gene="gltB" /locus_tag="b3212" /gene_synonym="aspB" /gene_synonym="ECK3202" /gene_synonym="JW3179" /gene_synonym="ossB" /gene_synonym="psiQ" /db_xref="EcoGene:EG10403" CDS 3217452..3221912 /gene="gltB" /locus_tag="b3212" /gene_synonym="aspB" /gene_synonym="ECK3202" /gene_synonym="JW3179" /gene_synonym="ossB" /gene_synonym="psiQ" /EC_number="1.4.1.13" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="glutamate synthase, large subunit" /protein_id="AAC76244.2" /db_xref="GI:308199519" /db_xref="ASAP:ABE-0010545" /db_xref="UniProtKB/Swiss-Prot:P09831" /db_xref="EcoGene:EG10403" /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPTDLPRFYLDLADLRLESAICLFHQRF STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQ HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ" gene 3221925..3223343 /gene="gltD" /locus_tag="b3213" /gene_synonym="aspB" /gene_synonym="ECK3203" /gene_synonym="JW3180" /gene_synonym="ossB" /gene_synonym="psiQ" /db_xref="EcoGene:EG10404" CDS 3221925..3223343 /gene="gltD" /locus_tag="b3213" /gene_synonym="aspB" /gene_synonym="ECK3203" /gene_synonym="JW3180" /gene_synonym="ossB" /gene_synonym="psiQ" /EC_number="1.4.1.13" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="glutamate synthase, small subunit; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="glutamate synthase, 4Fe-4S protein, small subunit" /protein_id="AAC76245.1" /db_xref="GI:1789606" /db_xref="ASAP:ABE-0010547" /db_xref="UniProtKB/Swiss-Prot:P09832" /db_xref="EcoGene:EG10404" /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGE TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD LVVTAIAEGRKAADGIMNWLEV" repeat_region 3223415..3223513 /note="RIP51 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene 3223903..3224667 /gene="gltF" /locus_tag="b3214" /gene_synonym="ECK3204" /gene_synonym="JW3181" /gene_synonym="ossB" /db_xref="EcoGene:EG11514" CDS 3223903..3224667 /gene="gltF" /locus_tag="b3214" /gene_synonym="ECK3204" /gene_synonym="JW3181" /gene_synonym="ossB" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="regulator of gltBDF operon, induction of Ntr enzymes; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006537 - glutamate biosynthetic process; GO_process: GO:0006807 - nitrogen compound metabolic process; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="periplasmic protein" /protein_id="AAC76246.1" /db_xref="GI:1789608" /db_xref="ASAP:ABE-0010549" /db_xref="UniProtKB/Swiss-Prot:P28721" /db_xref="EcoGene:EG11514" /translation="MFFKKNLTTAAICAALSVAAFSAMATDSTDTELTIIGEYTPGAC TPVVTGGGIVDYGKHHNSALNPTGKSNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQ STIVALNDTSYIEKAYDTLVDMKGTKNAFGLGSAPNGQKIGAASIGIDRSNGGIHAAD DTGEIPVDLIQTDHWSAATPTWKASSNGAFCSLTSCSAIERGYSVAKTGELTPVAITA VTFPLLIDAAVNDNTILGSDETIKLDGNVTISVQYL" gene 3224839..3225513 /gene="yhcA" /locus_tag="b3215" /gene_synonym="ECK3205" /gene_synonym="JW3182" /db_xref="EcoGene:EG11515" CDS 3224839..3225513 /gene="yhcA" /locus_tag="b3215" /gene_synonym="ECK3205" /gene_synonym="JW3182" /function="putative factor; Not classified" /note="putative chaperone; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="putative periplasmic chaperone protein" /protein_id="AAC76247.1" /db_xref="GI:1789609" /db_xref="ASAP:ABE-0010552" /db_xref="UniProtKB/Swiss-Prot:P28722" /db_xref="EcoGene:EG11515" /translation="MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKN TDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKR VTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPS NYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNK YVTDLK" gene 3225534..3227915 /gene="yhcD" /locus_tag="b3216" /gene_synonym="ECK3206" /gene_synonym="JW3183" /db_xref="EcoGene:EG12810" CDS 3225534..3227915 /gene="yhcD" /locus_tag="b3216" /gene_synonym="ECK3206" /gene_synonym="JW3183" /function="putative membrane; Not classified" /note="putative outer membrane protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane" /codon_start=1 /transl_table=11 /product="putative outer membrane fimbrial subunit usher protein" /protein_id="AAC76248.1" /db_xref="GI:1789610" /db_xref="ASAP:ABE-0010554" /db_xref="UniProtKB/Swiss-Prot:P45420" /db_xref="EcoGene:EG12810" /translation="MLKKTLLAYTIGFAFSPPANADGIEIAAVDFDRETLKSLGVDPN ISHYFSRSARFLPGEYSLIVSVNGEKKGNIATRFDENGDICLDQAFLQQAGLKIPSEE KNGCYDYILSYPGTTITPLPNQEALDIIVSPQAIIPIGLDLTNAATGGTAALLNYSLM SSRAEFSNGSSDYSQAALEGGININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDL KTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQG VLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGY RFAIGRVDDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPDLT VSSQISTSQDTKDSLQGQKYRLDANYNLPFSLGLTTSLTRSDRHYRELSEAIDDDYTD PTKSTYALGLNWSNSILGGFNISGYKTYSYDGDNDSSNLNINWNKAFKHATVSVNWQH QLSASENNEDDGDLFYVNISIPFGRSNTATLYTRHDDHKTHYGTGVMGVVSDEMSYYV NAERDHDERETSLNGSISSNLHYTQVSLAAGASGSDSRTYNGTMSGGIAVHDQGVTFS PWTINDTFAIAKMDNNIAGVRITSQAGPVWTDFRGNAVIPSIQPWRTSGVEIDTASLP KNVDIGNGTKMIKQGRGAVGKVGFSAITQRRALLNITLSDGKKLPRGVAIEDSEGNYL TTSVDDGVVFLNNIKPDMVLDIKDEQQSCRIHLTFPEDAPKDVFYETATGECQ" gene join(3227912..3228278,3229478..3229656) /gene="yhcE" /locus_tag="b4569" /gene_synonym="ECK3207" /gene_synonym="JW3184" /gene_synonym="JW3187" /pseudo /db_xref="EcoGene:EG12811" CDS join(3227912..3228278,3229478..3229656) /gene="yhcE" /locus_tag="b4569" /gene_synonym="ECK3207" /gene_synonym="JW3184" /gene_synonym="JW3187" /note="pseudogene fragment; interrupted by IS5" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0010556" /db_xref="ASAP:ABE-0285070" /db_xref="ASAP:ABE-0285102" /db_xref="UniProtKB/Swiss-Prot:P45421" /db_xref="EcoGene:EG12811" mobile_element complement(3228283..3229477) /mobile_element_type="insertion sequence:IS5R" gene complement(3228429..3229445) /gene="insH1" /locus_tag="b3218" /gene_synonym="ECK0261" /db_xref="EcoGene:EG40008" CDS complement(3228429..3229445) /gene="insH1" /locus_tag="b3218" /gene_synonym="ECK0261" /function="IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related" /codon_start=1 /transl_table=11 /product="IS5 transposase and trans-activator" /protein_id="AAC76250.1" /db_xref="GI:1789612" /db_xref="ASAP:ABE-0010559" /db_xref="UniProtKB/Swiss-Prot:P0CE57" /db_xref="EcoGene:EG40008" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 3229653..3230369 /gene="yhcF" /locus_tag="b3219" /gene_synonym="ECK3208" /gene_synonym="JW3188" /db_xref="EcoGene:EG12812" CDS 3229653..3230369 /gene="yhcF" /locus_tag="b3219" /gene_synonym="ECK3208" /gene_synonym="JW3188" /function="putative regulator; Not classified" /note="GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator" /protein_id="AAC76251.1" /db_xref="GI:1789613" /db_xref="ASAP:ABE-0010564" /db_xref="UniProtKB/Swiss-Prot:P45422" /db_xref="EcoGene:EG12812" /translation="MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNG GVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGG QSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIA GADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIAND LGGSEKIELDGKAVISVVYL" gene 3230554..3231681 /gene="yhcG" /locus_tag="b3220" /gene_synonym="ECK3209" /gene_synonym="JW3189" /db_xref="EcoGene:EG12813" CDS 3230554..3231681 /gene="yhcG" /locus_tag="b3220" /gene_synonym="ECK3209" /gene_synonym="JW3189" /codon_start=1 /transl_table=11 /product="DUF1016 family protein in the PD-(D/E)XK nuclease superfamily" /protein_id="AAC76252.1" /db_xref="GI:1789614" /db_xref="ASAP:ABE-0010567" /db_xref="UniProtKB/Swiss-Prot:P45423" /db_xref="EcoGene:EG12813" /translation="MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQE IGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEI HQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYE KETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLE FLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRR LRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYA LAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR" gene complement(3231741..3232205) /gene="yhcH" /locus_tag="b3221" /gene_synonym="ECK3210" /gene_synonym="JW3190" /db_xref="EcoGene:EG12814" CDS complement(3231741..3232205) /gene="yhcH" /locus_tag="b3221" /gene_synonym="ECK3210" /gene_synonym="JW3190" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="DUF386 family protein, cupin superfamily" /protein_id="AAC76253.1" /db_xref="GI:1789615" /db_xref="ASAP:ABE-0010569" /db_xref="UniProtKB/Swiss-Prot:P45424" /db_xref="EcoGene:EG12814" /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ LCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA" gene complement(3232202..3233077) /gene="nanK" /locus_tag="b3222" /gene_synonym="ECK3211" /gene_synonym="JW5538" /gene_synonym="yhcI" /db_xref="EcoGene:EG12815" CDS complement(3232202..3233077) /gene="nanK" /locus_tag="b3222" /gene_synonym="ECK3211" /gene_synonym="JW5538" /gene_synonym="yhcI" /function="putative regulator; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylmannosamine kinase" /protein_id="AAC76254.2" /db_xref="GI:87082230" /db_xref="ASAP:ABE-0010571" /db_xref="UniProtKB/Swiss-Prot:P45425" /db_xref="EcoGene:EG12815" /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDA LSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIA INDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLAD PHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSA RTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD AGLLGAALLAQGEKL" gene complement(3233074..3233763) /gene="nanE" /locus_tag="b3223" /gene_synonym="ECK3212" /gene_synonym="JW3192" /gene_synonym="yhcJ" /db_xref="EcoGene:EG12816" CDS complement(3233074..3233763) /gene="nanE" /locus_tag="b3223" /gene_synonym="ECK3212" /gene_synonym="JW3192" /gene_synonym="yhcJ" /function="putative enzyme; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="putative N-acetylmannosamine-6-P epimerase" /protein_id="AAC76255.1" /db_xref="GI:1789617" /db_xref="ASAP:ABE-0010575" /db_xref="UniProtKB/Swiss-Prot:P0A761" /db_xref="EcoGene:EG12816" /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ WYNTAMKKAVL" gene complement(3233811..3235301) /gene="nanT" /locus_tag="b3224" /gene_synonym="ECK3213" /gene_synonym="JW3193" /db_xref="EcoGene:EG20145" CDS complement(3233811..3235301) /gene="nanT" /locus_tag="b3224" /gene_synonym="ECK3213" /gene_synonym="JW3193" /function="transport; Murein sacculus, peptidoglycan" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="sialic acid transporter" /protein_id="AAC76256.2" /db_xref="GI:87082231" /db_xref="ASAP:ABE-0010577" /db_xref="UniProtKB/Swiss-Prot:P41036" /db_xref="EcoGene:EG20145" /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSAGKRWPT GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFL GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS" gene complement(3235410..3236303) /gene="nanA" /locus_tag="b3225" /gene_synonym="ECK3214" /gene_synonym="JW3194" /gene_synonym="npl" /db_xref="EcoGene:EG10637" CDS complement(3235410..3236303) /gene="nanA" /locus_tag="b3225" /gene_synonym="ECK3214" /gene_synonym="JW3194" /gene_synonym="npl" /EC_number="4.1.3.3" /function="enzyme; Surface polysaccharides & antigens" /experiment="N-terminus verified by Edman degradation: PMID 3909108" /note="N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?; GO_function: GO:0042280 - cell surface antigen activity, host-interacting; GO_process: GO:0046349 - amino sugar biosynthetic process" /codon_start=1 /transl_table=11 /product="N-acetylneuraminate lyase" /protein_id="AAC76257.1" /db_xref="GI:1789620" /db_xref="ASAP:ABE-0010579" /db_xref="UniProtKB/Swiss-Prot:P0A6L4" /db_xref="EcoGene:EG10637" /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP VDEKYLPELKALAQQLMQERG" gene complement(3236425..3237216) /gene="nanR" /locus_tag="b3226" /gene_synonym="ECK3215" /gene_synonym="JW3195" /gene_synonym="yhcK" /db_xref="EcoGene:EG12817" CDS complement(3236425..3237216) /gene="nanR" /locus_tag="b3226" /gene_synonym="ECK3215" /gene_synonym="JW3195" /gene_synonym="yhcK" /function="regulator; Not classified" /note="GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="sialic acid-inducible nan operon repressor" /protein_id="AAC76258.1" /db_xref="GI:1789621" /db_xref="ASAP:ABE-0010584" /db_xref="UniProtKB/Swiss-Prot:P0A8W0" /db_xref="EcoGene:EG12817" /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK" gene 3237596..3238963 /gene="dcuD" /locus_tag="b3227" /gene_synonym="ECK3216" /gene_synonym="JW3196" /gene_synonym="yhcL" /db_xref="EcoGene:EG12818" CDS 3237596..3238963 /gene="dcuD" /locus_tag="b3227" /gene_synonym="ECK3216" /gene_synonym="JW3196" /gene_synonym="yhcL" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC76259.1" /db_xref="GI:1789622" /db_xref="ASAP:ABE-0010589" /db_xref="UniProtKB/Swiss-Prot:P45428" /db_xref="EcoGene:EG12818" /translation="MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGF GGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSL LSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAV AVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRA FDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVV MLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIG TVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVP AVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIAT ITLFY" gene complement(3239006..3239503) /gene="sspB" /locus_tag="b3228" /gene_synonym="ECK3217" /gene_synonym="JW3197" /db_xref="EcoGene:EG10978" CDS complement(3239006..3239503) /gene="sspB" /locus_tag="b3228" /gene_synonym="ECK3217" /gene_synonym="JW3197" /function="regulator; Global regulatory functions" /experiment="N-terminus verified by Edman degradation: PMID 11009422" /note="stringent starvation protein B; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="ClpXP protease specificity enhancing factor" /protein_id="AAC76260.1" /db_xref="GI:1789623" /db_xref="ASAP:ABE-0010591" /db_xref="UniProtKB/Swiss-Prot:P0AFZ3" /db_xref="EcoGene:EG10978" /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA LRVVK" gene complement(3239509..3240147) /gene="sspA" /locus_tag="b3229" /gene_synonym="ECK3218" /gene_synonym="JW3198" /gene_synonym="pog" /gene_synonym="ssp" /db_xref="EcoGene:EG10977" CDS complement(3239509..3240147) /gene="sspA" /locus_tag="b3229" /gene_synonym="ECK3218" /gene_synonym="JW3198" /gene_synonym="pog" /gene_synonym="ssp" /function="regulator; Global regulatory functions" /note="regulator of transcription; stringent starvation protein A; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription; GO_process: GO:0006355 - regulation of transcription, DNA-dependent; GO_process: GO:0042594 - response to starvation" /codon_start=1 /transl_table=11 /product="stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog" /protein_id="AAC76261.1" /db_xref="GI:1789624" /db_xref="ASAP:ABE-0010594" /db_xref="UniProtKB/Swiss-Prot:P0ACA3" /db_xref="EcoGene:EG10977" /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS" gene complement(3240542..3240934) /gene="rpsI" /locus_tag="b3230" /gene_synonym="ECK3219" /gene_synonym="JW3199" /db_xref="EcoGene:EG10908" CDS complement(3240542..3240934) /gene="rpsI" /locus_tag="b3230" /gene_synonym="ECK3219" /gene_synonym="JW3199" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S9" /protein_id="AAC76262.1" /db_xref="GI:1789625" /db_xref="ASAP:ABE-0010597" /db_xref="UniProtKB/Swiss-Prot:P0A7X3" /db_xref="EcoGene:EG10908" /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG FVTRDARQVERKKVGLRKARRRPQFSKR" gene complement(3240950..3241378) /gene="rplM" /locus_tag="b3231" /gene_synonym="ECK3220" /gene_synonym="JW3200" /db_xref="EcoGene:EG10874" CDS complement(3240950..3241378) /gene="rplM" /locus_tag="b3231" /gene_synonym="ECK3220" /gene_synonym="JW3200" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 365580,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L13" /protein_id="AAC76263.1" /db_xref="GI:1789626" /db_xref="ASAP:ABE-0010599" /db_xref="UniProtKB/Swiss-Prot:P0AA10" /db_xref="EcoGene:EG10874" /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI" gene complement(3241597..3242724) /gene="zapE" /locus_tag="b3232" /gene_synonym="ECK3221" /gene_synonym="JW3201" /gene_synonym="yhcM" /db_xref="EcoGene:EG12819" CDS complement(3241597..3242724) /gene="zapE" /locus_tag="b3232" /gene_synonym="ECK3221" /gene_synonym="JW3201" /gene_synonym="yhcM" /function="enzyme; Not classified" /codon_start=1 /transl_table=11 /product="divisome ATPase" /protein_id="AAC76264.1" /db_xref="GI:1789627" /db_xref="ASAP:ABE-0010602" /db_xref="UniProtKB/Swiss-Prot:P64612" /db_xref="EcoGene:EG12819" /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTP PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL TQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFT TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG" gene 3242918..3243316 /gene="yhcB" /locus_tag="b3233" /gene_synonym="ECK3222" /gene_synonym="JW5539" /db_xref="EcoGene:EG12614" CDS 3242918..3243316 /gene="yhcB" /locus_tag="b3233" /gene_synonym="ECK3222" /gene_synonym="JW5539" /codon_start=1 /transl_table=11 /product="DUF1043 family inner membrane-anchored protein" /protein_id="AAC76265.2" /db_xref="GI:87082232" /db_xref="ASAP:ABE-0010606" /db_xref="UniProtKB/Swiss-Prot:P0ADW3" /db_xref="EcoGene:EG12614" /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES EASNDQAPVQMPRDYSEGASGLLRTGAKRD" gene 3243470..3244837 /gene="degQ" /locus_tag="b3234" /gene_synonym="ECK3223" /gene_synonym="hhoA" /gene_synonym="JW3203" /db_xref="EcoGene:EG12612" CDS 3243470..3244837 /gene="degQ" /locus_tag="b3234" /gene_synonym="ECK3223" /gene_synonym="hhoA" /gene_synonym="JW3203" /EC_number="3.4.21.-" /function="enzyme; Degradation of proteins, peptides, glycopeptides" /note="serine endoprotease" /codon_start=1 /transl_table=11 /product="serine endoprotease, periplasmic" /protein_id="AAC76266.1" /db_xref="GI:1789629" /db_xref="ASAP:ABE-0010609" /db_xref="UniProtKB/Swiss-Prot:P39099" /db_xref="EcoGene:EG12612" /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGI KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI YLLMR" gene 3244927..3245994 /gene="degS" /locus_tag="b3235" /gene_synonym="ECK3224" /gene_synonym="hhoB" /gene_synonym="htrH" /gene_synonym="JW3204" /db_xref="EcoGene:EG11652" CDS 3244927..3245994 /gene="degS" /locus_tag="b3235" /gene_synonym="ECK3224" /gene_synonym="hhoB" /gene_synonym="htrH" /gene_synonym="JW3204" /EC_number="3.4.21.-" /function="enzyme; Degradation of proteins, peptides, glyco" /note="protease; GO_component: GO:0042597 - periplasmic space; GO_function: GO:0008233 - peptidase activity; GO_process: GO:0006508 - proteolysis" /codon_start=1 /transl_table=11 /product="serine endoprotease, periplasmic" /protein_id="AAC76267.1" /db_xref="GI:1789630" /db_xref="ASAP:ABE-0010611" /db_xref="UniProtKB/Swiss-Prot:P0AEE3" /db_xref="EcoGene:EG11652" /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGI DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV VMRDDKQLTLQVTIQEYPATN" gene complement(3246057..3246995) /gene="mdh" /locus_tag="b3236" /gene_synonym="ECK3225" /gene_synonym="JW3205" /db_xref="EcoGene:EG10576" CDS complement(3246057..3246995) /gene="mdh" /locus_tag="b3236" /gene_synonym="ECK3225" /gene_synonym="JW3205" /EC_number="1.1.1.37" /function="enzyme; Energy metabolism, carbon: TCA cycle" /experiment="N-terminus verified by Edman degradation: PMID 7028159,8506346,8670822,9298646,9600841,9740056" /note="malate dehydrogenase; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0006099 - tricarboxylic acid cycle; GO_process: GO:0006113 - fermentation; GO_process: GO:0009061 - anaerobic respiration; GO_process: GO:0006094 - gluconeogenesis; GO_process: GO:0009436 - glyoxylate catabolic process" /codon_start=1 /transl_table=11 /product="malate dehydrogenase, NAD(P)-binding" /protein_id="AAC76268.1" /db_xref="GI:1789632" /db_xref="ASAP:ABE-0010613" /db_xref="UniProtKB/Swiss-Prot:P61889" /db_xref="EcoGene:EG10576" /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK" gene 3247430..3247900 /gene="argR" /locus_tag="b3237" /gene_synonym="ECK3226" /gene_synonym="JW3206" /gene_synonym="Rarg" /gene_synonym="xerA" /db_xref="EcoGene:EG10070" CDS 3247430..3247900 /gene="argR" /locus_tag="b3237" /gene_synonym="ECK3226" /gene_synonym="JW3206" /gene_synonym="Rarg" /gene_synonym="xerA" /function="regulator; Amino acid biosynthesis: Arginine" /experiment="N-terminus verified by Edman degradation: PMID 3116542" /note="repressor of arg regulon; cer-mediated site specific recombination; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="l-arginine-responsive arginine metabolism regulon transcriptional regulator" /protein_id="AAC76269.1" /db_xref="GI:1789633" /db_xref="ASAP:ABE-0010620" /db_xref="UniProtKB/Swiss-Prot:P0A6D0" /db_xref="EcoGene:EG10070" /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL" gene 3248265..3248528 /gene="yhcN" /locus_tag="b3238" /gene_synonym="ECK3227" /gene_synonym="JW5540" /db_xref="EcoGene:EG12820" CDS 3248265..3248528 /gene="yhcN" /locus_tag="b3238" /gene_synonym="ECK3227" /gene_synonym="JW5540" /codon_start=1 /transl_table=11 /product="cadmium and peroxide resistance protein, stress-induced" /protein_id="AAC76270.2" /db_xref="GI:87082233" /db_xref="ASAP:ABE-0010623" /db_xref="UniProtKB/Swiss-Prot:P64614" /db_xref="EcoGene:EG12820" /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK" gene complement(3248584..3248856) /gene="yhcO" /locus_tag="b3239" /gene_synonym="ECK3228" /gene_synonym="JW3208" /db_xref="EcoGene:EG12821" CDS complement(3248584..3248856) /gene="yhcO" /locus_tag="b3239" /gene_synonym="ECK3228" /gene_synonym="JW3208" /codon_start=1 /transl_table=11 /product="putative barnase inhibitor" /protein_id="AAC76271.1" /db_xref="GI:1789635" /db_xref="ASAP:ABE-0010625" /db_xref="UniProtKB/Swiss-Prot:P64616" /db_xref="EcoGene:EG12821" /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH" gene complement(3248948..3250915) /gene="aaeB" /locus_tag="b3240" /gene_synonym="ECK3229" /gene_synonym="JW3209" /gene_synonym="yhcP" /db_xref="EcoGene:EG12822" CDS complement(3248948..3250915) /gene="aaeB" /locus_tag="b3240" /gene_synonym="ECK3229" /gene_synonym="JW3209" /gene_synonym="yhcP" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="p-hydroxybenzoic acid efflux system component" /protein_id="AAC76272.1" /db_xref="GI:1789636" /db_xref="ASAP:ABE-0010629" /db_xref="UniProtKB/Swiss-Prot:P46481" /db_xref="EcoGene:EG12822" /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA IVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE VQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK LRIWQAPPQVTEPVNRLAGMLHKYQHALTDS" gene complement(3250921..3251853) /gene="aaeA" /locus_tag="b3241" /gene_synonym="ECK3230" /gene_synonym="JW3210" /gene_synonym="yhcQ" /db_xref="EcoGene:EG12823" CDS complement(3250921..3251853) /gene="aaeA" /locus_tag="b3241" /gene_synonym="ECK3230" /gene_synonym="JW3210" /gene_synonym="yhcQ" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="p-hydroxybenzoic acid efflux system component" /protein_id="AAC76273.1" /db_xref="GI:1789637" /db_xref="ASAP:ABE-0010631" /db_xref="UniProtKB/Swiss-Prot:P46482" /db_xref="EcoGene:EG12823" /translation="MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFS ADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQ EKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAP ADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGS NKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWP AGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG" gene complement(3251861..3252064) /gene="aaeX" /locus_tag="b3242" /gene_synonym="ECK3231" /gene_synonym="JW5541" /gene_synonym="yhcR" /db_xref="EcoGene:EG12824" CDS complement(3251861..3252064) /gene="aaeX" /locus_tag="b3242" /gene_synonym="ECK3231" /gene_synonym="JW5541" /gene_synonym="yhcR" /codon_start=1 /transl_table=11 /product="DUF1656 family putative inner membrane efflux pump associated protein" /protein_id="AAC76274.2" /db_xref="GI:87082234" /db_xref="ASAP:ABE-0010636" /db_xref="UniProtKB/Swiss-Prot:P46478" /db_xref="EcoGene:EG12824" /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV WHPALFNTALYCCLFYLISRLFV" gene 3252247..3253176 /gene="aaeR" /locus_tag="b3243" /gene_synonym="ECK3232" /gene_synonym="JW3212" /gene_synonym="qseA" /gene_synonym="yhcS" /db_xref="EcoGene:EG12825" CDS 3252247..3253176 /gene="aaeR" /locus_tag="b3243" /gene_synonym="ECK3232" /gene_synonym="JW3212" /gene_synonym="qseA" /gene_synonym="yhcS" /note="GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="transcriptional regulator for aaeXAB operon" /protein_id="AAC76275.1" /db_xref="GI:1789639" /db_xref="ASAP:ABE-0010639" /db_xref="UniProtKB/Swiss-Prot:P67662" /db_xref="EcoGene:EG12825" /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK" gene complement(3253310..3254755) /gene="tldD" /locus_tag="b3244" /gene_synonym="ECK3233" /gene_synonym="JW3213" /gene_synonym="yhdO" /db_xref="EcoGene:EG12826" CDS complement(3253310..3254755) /gene="tldD" /locus_tag="b3244" /gene_synonym="ECK3233" /gene_synonym="JW3213" /gene_synonym="yhdO" /function="phenotype; Not classified" /note="suppresses inhibitory activity of CsrA" /codon_start=1 /transl_table=11 /product="putative peptidase" /protein_id="AAC76276.1" /db_xref="GI:1789640" /db_xref="ASAP:ABE-0010642" /db_xref="UniProtKB/Swiss-Prot:P0AGG8" /db_xref="EcoGene:EG12826" /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD SGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG GGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNG VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA" repeat_region 3254803..3255110 /note="REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences" gene complement(3255185..3258985) /gene="yhdP" /locus_tag="b4472" /gene_synonym="ECK3234" /gene_synonym="JW5542" /gene_synonym="yhdQ" /gene_synonym="yhdR" /db_xref="EcoGene:EG12827" CDS complement(3255185..3258985) /gene="yhdP" /locus_tag="b4472" /gene_synonym="ECK3234" /gene_synonym="JW5542" /gene_synonym="yhdQ" /gene_synonym="yhdR" /codon_start=1 /transl_table=11 /product="DUF3971-AsmA2 domains protein" /protein_id="AAT48173.1" /db_xref="GI:48994929" /db_xref="ASAP:ABE-0174102" /db_xref="UniProtKB/Swiss-Prot:P46474" /db_xref="EcoGene:EG12827" /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR WQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD GQATISWLNNNKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR NAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLI DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV TLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ VAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNIELNGDLKNV SSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIW AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLI DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK EKAQ" gene complement(3259053..3260522) /gene="rng" /locus_tag="b3247" /gene_synonym="adhR" /gene_synonym="cafA" /gene_synonym="ECK3235" /gene_synonym="JW3216" /gene_synonym="yhdF" /db_xref="EcoGene:EG11299" CDS complement(3259053..3260522) /gene="rng" /locus_tag="b3247" /gene_synonym="adhR" /gene_synonym="cafA" /gene_synonym="ECK3235" /gene_synonym="JW3216" /gene_synonym="yhdF" /EC_number="3.1.4.-" /function="structural component; Cell division" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="ribonuclease G" /protein_id="AAC76279.2" /db_xref="GI:87082235" /db_xref="ASAP:ABE-0010651" /db_xref="UniProtKB/Swiss-Prot:P0A9J0" /db_xref="EcoGene:EG11299" /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM" gene complement(3260512..3261105) /gene="yhdE" /locus_tag="b3248" /gene_synonym="ECK3236" /gene_synonym="JW3217" /gene_synonym="maf" /db_xref="EcoGene:EG11298" CDS complement(3260512..3261105) /gene="yhdE" /locus_tag="b3248" /gene_synonym="ECK3236" /gene_synonym="JW3217" /gene_synonym="maf" /codon_start=1 /transl_table=11 /product="dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase" /protein_id="AAC76280.1" /db_xref="GI:1789646" /db_xref="ASAP:ABE-0010653" /db_xref="UniProtKB/Swiss-Prot:P25536" /db_xref="EcoGene:EG11298" /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY VVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ VMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFV RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG" gene complement(3261114..3261602) /gene="mreD" /locus_tag="b3249" /gene_synonym="ECK3237" /gene_synonym="JW3218" /db_xref="EcoGene:EG10610" CDS complement(3261114..3261602) /gene="mreD" /locus_tag="b3249" /gene_synonym="ECK3237" /gene_synonym="JW3218" /function="structural component; Murein sacculus, peptidoglycan" /note="rod shape-determining protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="cell wall structural complex MreBCD transmembrane component MreD" /protein_id="AAC76281.1" /db_xref="GI:1789647" /db_xref="ASAP:ABE-0010656" /db_xref="UniProtKB/Swiss-Prot:P0ABH4" /db_xref="EcoGene:EG10610" /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA VQ" gene complement(3261602..3262705) /gene="mreC" /locus_tag="b3250" /gene_synonym="ECK3238" /gene_synonym="JW3219" /db_xref="EcoGene:EG10609" CDS complement(3261602..3262705) /gene="mreC" /locus_tag="b3250" /gene_synonym="ECK3238" /gene_synonym="JW3219" /function="structural component; Murein sacculus, peptidoglycan" /note="rod shape-determining protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_process: GO:0009252 - peptidoglycan biosynthetic process" /codon_start=1 /transl_table=11 /product="cell wall structural complex MreBCD transmembrane component MreC" /protein_id="AAC76282.1" /db_xref="GI:1789648" /db_xref="ASAP:ABE-0010658" /db_xref="UniProtKB/Swiss-Prot:P16926" /db_xref="EcoGene:EG10609" /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPATGNAATA PAAPTQPAANRSPQRATPPQSGAQPPARAPGGQ" gene complement(3262771..3263814) /gene="mreB" /locus_tag="b3251" /gene_synonym="ECK3239" /gene_synonym="envB" /gene_synonym="JW3220" /gene_synonym="mon" /gene_synonym="rodY" /db_xref="EcoGene:EG10608" CDS complement(3262771..3263814) /gene="mreB" /locus_tag="b3251" /gene_synonym="ECK3239" /gene_synonym="envB" /gene_synonym="JW3220" /gene_synonym="mon" /gene_synonym="rodY" /function="phenotype; Cell division" /experiment="N-terminus verified by Edman degradation: PMID 3049542,9298646" /note="regulator of ftsI, penicillin binding protein 3, septation function; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="cell wall structural complex MreBCD, actin-like component MreB" /protein_id="AAC76283.2" /db_xref="GI:87082236" /db_xref="ASAP:ABE-0010661" /db_xref="UniProtKB/Swiss-Prot:P0A9X4" /db_xref="EcoGene:EG10608" /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE MIDMHGGDLFSEE" gene complement(3264119..3266059) /gene="csrD" /locus_tag="b3252" /gene_synonym="ECK3240" /gene_synonym="JW3221" /gene_synonym="yhdA" /db_xref="EcoGene:EG10018" CDS complement(3264119..3266059) /gene="csrD" /locus_tag="b3252" /gene_synonym="ECK3240" /gene_synonym="JW3221" /gene_synonym="yhdA" /codon_start=1 /transl_table=11 /product="targeting factor for csrBC sRNA degradation" /protein_id="AAC76284.1" /db_xref="GI:1789650" /db_xref="ASAP:ABE-0010663" /db_xref="UniProtKB/Swiss-Prot:P13518" /db_xref="EcoGene:EG10018" /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA VATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD LFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQR QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG DFFASSQPLDTNVKKYSQRYSV" gene 3266211..3267185 /gene="acuI" /locus_tag="b3253" /gene_synonym="ECK3241" /gene_synonym="JW3222" /gene_synonym="yhdH" /db_xref="EcoGene:EG11315" CDS 3266211..3267185 /gene="acuI" /locus_tag="b3253" /gene_synonym="ECK3241" /gene_synonym="JW3222" /gene_synonym="yhdH" /function="putative enzyme; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="putative acryloyl-CoA reductase" /protein_id="AAC76285.1" /db_xref="GI:1789651" /db_xref="ASAP:ABE-0010667" /db_xref="UniProtKB/Swiss-Prot:P26646" /db_xref="EcoGene:EG11315" /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDA LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA RVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDT VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN" gene 3267222..3267364 /gene="yrdF" /locus_tag="b4697" /gene_synonym="ECK4509" /pseudo /db_xref="EcoGene:EG14497" CDS 3267222..3267364 /gene="yrdF" /locus_tag="b4697" /gene_synonym="ECK4509" /note="pseudogene, conserved protein" /pseudo /codon_start=1 /transl_table=11 /db_xref="EcoGene:EG14497" gene 3267365..3267758 /gene="yrdE" /locus_tag="b4646" /gene_synonym="ECK4442" /pseudo /db_xref="EcoGene:EG14352" CDS join(3267365..3267460,3267459..3267758) /gene="yrdE" /locus_tag="b4646" /gene_synonym="ECK4442" /note="pseudogene, yedZ paralog" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0285243" /db_xref="EcoGene:EG14352" gene 3268163..3268633 /gene="accB" /locus_tag="b3255" /gene_synonym="ECK3242" /gene_synonym="fabE" /gene_synonym="JW3223" /db_xref="EcoGene:EG10275" CDS 3268163..3268633 /gene="accB" /locus_tag="b3255" /gene_synonym="ECK3242" /gene_synonym="fabE" /gene_synonym="JW3223" /function="carrier; Biosynthesis of cofactors, carriers: biotin carboxyl carrier protein (BCCP)" /experiment="N-terminus verified by Edman degradation: PMID 1370469,9740056" /note="acetylCoA carboxylase, BCCP subunit; carrier of biotin; GO_process: GO:0042966 - biotin carboxyl carrier protein biosynthetic process" /codon_start=1 /transl_table=11 /product="acetyl CoA carboxylase, BCCP subunit" /protein_id="AAC76287.1" /db_xref="GI:1789653" /db_xref="ASAP:ABE-0010675" /db_xref="UniProtKB/Swiss-Prot:P0ABD8" /db_xref="EcoGene:EG10275" /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE" gene 3268644..3269993 /gene="accC" /locus_tag="b3256" /gene_synonym="ECK3243" /gene_synonym="fabG" /gene_synonym="JW3224" /db_xref="EcoGene:EG10276" CDS 3268644..3269993 /gene="accC" /locus_tag="b3256" /gene_synonym="ECK3243" /gene_synonym="fabG" /gene_synonym="JW3224" /EC_number="6.3.4.14" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /experiment="N-terminus verified by Edman degradation: PMID 1370469,1682920,9298646" /note="acetyl CoA carboxylase, biotin carboxylase subunit; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, biotin carboxylase subunit" /protein_id="AAC76288.1" /db_xref="GI:1789654" /db_xref="ASAP:ABE-0010677" /db_xref="UniProtKB/Swiss-Prot:P24182" /db_xref="EcoGene:EG10276" /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK" gene 3270102..3270344 /gene="yhdT" /locus_tag="b3257" /gene_synonym="ECK3244" /gene_synonym="JW3225" /db_xref="EcoGene:EG12831" CDS 3270102..3270344 /gene="yhdT" /locus_tag="b3257" /gene_synonym="ECK3244" /gene_synonym="JW3225" /codon_start=1 /transl_table=11 /product="DUF997 family putative inner membrane protein" /protein_id="AAC76289.1" /db_xref="GI:1789655" /db_xref="ASAP:ABE-0010690" /db_xref="UniProtKB/Swiss-Prot:P45566" /db_xref="EcoGene:EG12831" /translation="MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPR WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA" gene 3270334..3271785 /gene="panF" /locus_tag="b3258" /gene_synonym="ECK3245" /gene_synonym="JW3226" /db_xref="EcoGene:EG10685" CDS 3270334..3271785 /gene="panF" /locus_tag="b3258" /gene_synonym="ECK3245" /gene_synonym="JW3226" /function="transport; Transport of small molecules: Cations" /note="sodium/pantothenate symporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0015937 - coenzyme A biosynthetic process" /codon_start=1 /transl_table=11 /product="pantothenate:sodium symporter" /protein_id="AAC76290.2" /db_xref="GI:87082237" /db_xref="ASAP:ABE-0010695" /db_xref="UniProtKB/Swiss-Prot:P16256" /db_xref="EcoGene:EG10685" /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQ TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK" gene 3271797..3272678 /gene="prmA" /locus_tag="b3259" /gene_synonym="ECK3246" /gene_synonym="JW3227" /gene_synonym="prm-1" /gene_synonym="yhdI" /db_xref="EcoGene:EG11497" CDS 3271797..3272678 /gene="prmA" /locus_tag="b3259" /gene_synonym="ECK3246" /gene_synonym="JW3227" /gene_synonym="prm-1" /gene_synonym="yhdI" /EC_number="2.1.1.-" /function="enzyme; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="methyltransferase for 50S ribosomal subunit protein L11" /protein_id="AAC76291.1" /db_xref="GI:2367208" /db_xref="ASAP:ABE-0010697" /db_xref="UniProtKB/Swiss-Prot:P0A8T1" /db_xref="EcoGene:EG11497" /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL DPVVEKEEWCRITGRKN" gene 3273007..3273972 /gene="dusB" /locus_tag="b3260" /gene_synonym="ECK3247" /gene_synonym="JW3228" /gene_synonym="yhdG" /db_xref="EcoGene:EG11311" CDS 3273007..3273972 /gene="dusB" /locus_tag="b3260" /gene_synonym="ECK3247" /gene_synonym="JW3228" /gene_synonym="yhdG" /function="enzyme; tRNA modification" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase B" /protein_id="AAC76292.1" /db_xref="GI:1789660" /db_xref="ASAP:ABE-0010700" /db_xref="UniProtKB/Swiss-Prot:P0ABT5" /db_xref="EcoGene:EG11311" /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA" gene 3273998..3274294 /gene="fis" /locus_tag="b3261" /gene_synonym="ECK3248" /gene_synonym="JW3229" /gene_synonym="nbp" /db_xref="EcoGene:EG10317" CDS 3273998..3274294 /gene="fis" /locus_tag="b3261" /gene_synonym="ECK3248" /gene_synonym="JW3229" /gene_synonym="nbp" /function="factor; DNA - replication, repair, restriction/modification" /experiment="N-terminus verified by Edman degradation: PMID 2835774,2837762,8809757" /note="site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006310 - DNA recombination" /codon_start=1 /transl_table=11 /product="global DNA-binding transcriptional dual regulator" /protein_id="AAC76293.1" /db_xref="GI:1789661" /db_xref="ASAP:ABE-0010703" /db_xref="UniProtKB/Swiss-Prot:P0A6R3" /db_xref="EcoGene:EG10317" /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN" gene 3274380..3275264 /gene="yhdJ" /locus_tag="b3262" /gene_synonym="ccrM" /gene_synonym="ECK3249" /gene_synonym="JW5543" /db_xref="EcoGene:EG11498" CDS 3274380..3275264 /gene="yhdJ" /locus_tag="b3262" /gene_synonym="ccrM" /gene_synonym="ECK3249" /gene_synonym="JW5543" /function="putative enzyme; Not classified" /note="putative methyltransferase" /codon_start=1 /transl_table=11 /product="DNA adenine methyltransferase, SAM-dependent" /protein_id="AAC76294.2" /db_xref="GI:87082238" /db_xref="ASAP:ABE-0010706" /db_xref="UniProtKB/Swiss-Prot:P28638" /db_xref="EcoGene:EG11498" /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF TIKSRIVWSYDSSGVQAKKHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALI DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIV LDPFAGSFTTGAVAIASGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG NLSKRSRLSEVDPDLITK" gene 3275348..3275527 /gene="yhdU" /locus_tag="b3263" /gene_synonym="ECK3250" /gene_synonym="JW3231" /db_xref="EcoGene:EG12832" CDS 3275348..3275527 /gene="yhdU" /locus_tag="b3263" /gene_synonym="ECK3250" /gene_synonym="JW3231" /codon_start=1 /transl_table=11 /product="putative membrane protein" /protein_id="AAC76295.1" /db_xref="GI:1789663" /db_xref="ASAP:ABE-0010710" /db_xref="UniProtKB/Swiss-Prot:P64619" /db_xref="EcoGene:EG12832" /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNP LKLVNCDELNFQDRM" gene complement(3275530..3276192) /gene="acrS" /locus_tag="b3264" /gene_synonym="ECK3251" /gene_synonym="envR" /gene_synonym="JW3232" /gene_synonym="yhdK" /db_xref="EcoGene:EG11741" CDS complement(3275530..3276192) /gene="acrS" /locus_tag="b3264" /gene_synonym="ECK3251" /gene_synonym="envR" /gene_synonym="JW3232" /gene_synonym="yhdK" /function="regulator; Not classified" /note="putative transcriptional regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="acrAB operon transcriptional repressor" /protein_id="AAC76296.1" /db_xref="GI:1789664" /db_xref="ASAP:ABE-0010712" /db_xref="UniProtKB/Swiss-Prot:P0ACT2" /db_xref="EcoGene:EG11741" /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD VVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS VM" gene 3276591..3277748 /gene="acrE" /locus_tag="b3265" /gene_synonym="ECK3252" /gene_synonym="envC" /gene_synonym="JW3233" /db_xref="EcoGene:EG10266" CDS 3276591..3277748 /gene="acrE" /locus_tag="b3265" /gene_synonym="ECK3252" /gene_synonym="envC" /gene_synonym="JW3233" /function="membrane; Inner membrane" /note="transmembrane protein affects septum formation and cell membrane permeability; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cytoplasmic membrane lipoprotein" /protein_id="AAC76297.1" /db_xref="GI:1789665" /db_xref="ASAP:ABE-0010722" /db_xref="UniProtKB/Swiss-Prot:P24180" /db_xref="EcoGene:EG10266" /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA NYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK ATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR AVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK" gene 3277760..3280864 /gene="acrF" /locus_tag="b3266" /gene_synonym="ECK3253" /gene_synonym="envD" /gene_synonym="JW3234" /db_xref="EcoGene:EG10267" CDS 3277760..3280864 /gene="acrF" /locus_tag="b3266" /gene_synonym="ECK3253" /gene_synonym="envD" /gene_synonym="JW3234" /function="membrane; Drug/analog sensitivity" /note="integral transmembrane protein; acridine resistance; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="multidrug efflux system protein" /protein_id="AAC76298.1" /db_xref="GI:1789666" /db_xref="ASAP:ABE-0010724" /db_xref="UniProtKB/Swiss-Prot:P24181" /db_xref="EcoGene:EG10267" /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDI AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVAS NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ LGGTPALPGQQLNASIIAQTRFKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEE DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGV SLSDINQTISTALGGTYVNDFIDRGRVKKLYVQADAKFRMLPEDVDKLYVRSANGEMV PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRR CFKG" gene 3281117..3281338 /gene="yhdV" /locus_tag="b3267" /gene_synonym="ECK3254" /gene_synonym="JW3235" /db_xref="EcoGene:EG12833" CDS 3281117..3281338 /gene="yhdV" /locus_tag="b3267" /gene_synonym="ECK3254" /gene_synonym="JW3235" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="AAC76299.1" /db_xref="GI:1789667" /db_xref="ASAP:ABE-0010728" /db_xref="UniProtKB/Swiss-Prot:P64622" /db_xref="EcoGene:EG12833" /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTT QDNWETAGAIAGGAAAVAGLTMGIIALSK" gene 3281769..3282793 /gene="yhdW" /locus_tag="b3268" /gene_synonym="ECK3255" /gene_synonym="JW3236" /pseudo /db_xref="EcoGene:EG12834" CDS join(3281769..3281834,3281834..3282793) /gene="yhdW" /locus_tag="b3268" /gene_synonym="ECK3255" /gene_synonym="JW3236" /note="pseudogene, ABC transporter periplasmic binding protein family;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009063 - cellular amino acid catabolic process" /pseudo /codon_start=1 /transl_table=11 /db_xref="ASAP:ABE-0010731" /db_xref="UniProtKB/Swiss-Prot:P45766" /db_xref="EcoGene:EG12834" gene 3282861..3284042 /gene="yhdX" /locus_tag="b3269" /gene_synonym="ECK3256" /gene_synonym="JW5544" /db_xref="EcoGene:EG12835" CDS 3282861..3284042 /gene="yhdX" /locus_tag="b3269" /gene_synonym="ECK3256" /gene_synonym="JW5544" /function="putative transport; Not classified" /note="putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative amino acid ABC transporter permease" /protein_id="AAT48174.1" /db_xref="GI:48994930" /db_xref="ASAP:ABE-0010733" /db_xref="UniProtKB/Swiss-Prot:P45767" /db_xref="EcoGene:EG12835" /translation="MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTV TNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFA SVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSA FDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWP IAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFI AEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSS LAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVE R" gene 3284052..3285155 /gene="yhdY" /locus_tag="b3270" /gene_synonym="ECK3257" /gene_synonym="JW5545" /db_xref="EcoGene:EG12836" CDS 3284052..3285155 /gene="yhdY" /locus_tag="b3270" /gene_synonym="ECK3257" /gene_synonym="JW5545" /function="putative transport; Not classified" /note="putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative amino acid ABC transporter permease" /protein_id="AAC76302.2" /db_xref="GI:87082239" /db_xref="ASAP:ABE-0010736" /db_xref="UniProtKB/Swiss-Prot:P45768" /db_xref="EcoGene:EG12836" /translation="MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL ALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLT LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG YVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH" gene 3285163..3285921 /gene="yhdZ" /locus_tag="b3271" /gene_synonym="ECK3258" /gene_synonym="JW3239" /db_xref="EcoGene:EG12837" CDS 3285163..3285921 /gene="yhdZ" /locus_tag="b3271" /gene_synonym="ECK3258" /gene_synonym="JW3239" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; ATP-binding component of ABC superfamily; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="putative amino acid ABC transporter ATPase" /protein_id="AAC76303.1" /db_xref="GI:1789672" /db_xref="ASAP:ABE-0010738" /db_xref="UniProtKB/Swiss-Prot:P45769" /db_xref="EcoGene:EG12837" /translation="MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLC GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH LTVLQNCTLAPIWVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIAR SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI FMDRGEIVEQAAPDEFFAHPKSERTRAFLSQVIH" gene complement(3286150..3286269) /gene="rrfF" /locus_tag="b3272" /gene_synonym="ECK3259" /gene_synonym="JWR0073" /gene_synonym="rrfDbeta" /gene_synonym="rrvD" /db_xref="EcoGene:EG30091" rRNA complement(3286150..3286269) /gene="rrfF" /locus_tag="b3272" /gene_synonym="ECK3259" /gene_synonym="JWR0073" /gene_synonym="rrfDbeta" /gene_synonym="rrvD" /product="5S ribosomal RNA of rrnD operon" /db_xref="ASAP:ABE-0010740" /db_xref="EcoGene:EG30091" gene complement(3286307..3286382) /gene="thrV" /locus_tag="b3273" /gene_synonym="ECK3260" /gene_synonym="JWR0074" /db_xref="EcoGene:EG30103" tRNA complement(3286307..3286382) /gene="thrV" /locus_tag="b3273" /gene_synonym="ECK3260" /gene_synonym="JWR0074" /product="tRNA-Thr" /note="anticodon: GGU" /db_xref="ASAP:ABE-0010742" /db_xref="EcoGene:EG30103" gene complement(3286395..3286514) /gene="rrfD" /locus_tag="b3274" /gene_synonym="ECK3261" /gene_synonym="JWR0075" /db_xref="EcoGene:EG30073" rRNA complement(3286395..3286514) /gene="rrfD" /locus_tag="b3274" /gene_synonym="ECK3261" /gene_synonym="JWR0075" /product="5S ribosomal RNA of rrnD operon" /db_xref="ASAP:ABE-0010744" /db_xref="EcoGene:EG30073" gene complement(3286607..3289510) /gene="rrlD" /locus_tag="b3275" /gene_synonym="ECK3262" /gene_synonym="JWR0076" /db_xref="EcoGene:EG30080" rRNA complement(3286607..3289510) /gene="rrlD" /locus_tag="b3275" /gene_synonym="ECK3262" /gene_synonym="JWR0076" /product="23S ribosomal RNA of rrnD operon" /db_xref="ASAP:ABE-0010746" /db_xref="EcoGene:EG30080" gene complement(3289685..3289760) /gene="alaU" /locus_tag="b3276" /gene_synonym="ECK3263" /gene_synonym="JWR0077" /gene_synonym="talD" /db_xref="EcoGene:EG30009" tRNA complement(3289685..3289760) /gene="alaU" /locus_tag="b3276" /gene_synonym="ECK3263" /gene_synonym="JWR0077" /gene_synonym="talD" /product="tRNA-Ala" /note="anticodon: UGC" /db_xref="ASAP:ABE-0010748" /db_xref="EcoGene:EG30009" gene complement(3289803..3289879) /gene="ileU" /locus_tag="b3277" /gene_synonym="ECK3264" /gene_synonym="JWR0078" /gene_synonym="tilD" /db_xref="EcoGene:EG30044" tRNA complement(3289803..3289879) /gene="ileU" /locus_tag="b3277" /gene_synonym="ECK3264" /gene_synonym="JWR0078" /gene_synonym="tilD" /product="tRNA-Ile" /note="anticodon: GAU" /db_xref="ASAP:ABE-0010750" /db_xref="EcoGene:EG30044" gene complement(3289948..3291489) /gene="rrsD" /locus_tag="b3278" /gene_synonym="ECK3265" /gene_synonym="JWR0079" /db_xref="EcoGene:EG30087" rRNA complement(3289948..3291489) /gene="rrsD" /locus_tag="b3278" /gene_synonym="ECK3265" /gene_synonym="JWR0079" /product="16S ribosomal RNA of rrnD operon" /db_xref="ASAP:ABE-0010753" /db_xref="EcoGene:EG30087" gene 3291963..3292517 /gene="yrdA" /locus_tag="b3279" /gene_synonym="ECK3266" /gene_synonym="JW5710" /db_xref="EcoGene:EG12838" CDS 3291963..3292517 /gene="yrdA" /locus_tag="b3279" /gene_synonym="ECK3266" /gene_synonym="JW5710" /function="putative enzyme; Not classified" /note="putative transferase" /codon_start=1 /transl_table=11 /product="bacterial transferase hexapeptide domain protein" /protein_id="AAC76304.2" /db_xref="GI:87082240" /db_xref="ASAP:ABE-0010759" /db_xref="UniProtKB/Swiss-Prot:P0A9W9" /db_xref="EcoGene:EG12838" /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVV IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG LRYSANNYVKWKDEYLDQGNQTQP" gene complement(3292493..3292750) /gene="yrdB" /locus_tag="b3280" /gene_synonym="ECK3267" /gene_synonym="JW3241" /db_xref="EcoGene:EG12839" CDS complement(3292493..3292750) /gene="yrdB" /locus_tag="b3280" /gene_synonym="ECK3267" /gene_synonym="JW3241" /codon_start=1 /transl_table=11 /product="DUF1488 family protein" /protein_id="AAC76305.1" /db_xref="GI:1789674" /db_xref="ASAP:ABE-0010761" /db_xref="UniProtKB/Swiss-Prot:P45795" /db_xref="EcoGene:EG12839" /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP" gene complement(3292747..3293565) /gene="aroE" /locus_tag="b3281" /gene_synonym="ECK3268" /gene_synonym="JW3242" /db_xref="EcoGene:EG10077" CDS complement(3292747..3293565) /gene="aroE" /locus_tag="b3281" /gene_synonym="ECK3268" /gene_synonym="JW3242" /EC_number="1.1.1.25" /function="enzyme; Amino acid biosynthesis: Chorismate" /experiment="N-terminus verified by Edman degradation: PMID 3277621" /note="dehydroshikimate reductase; GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="dehydroshikimate reductase, NAD(P)-binding" /protein_id="AAC76306.1" /db_xref="GI:1789675" /db_xref="ASAP:ABE-0010763" /db_xref="UniProtKB/Swiss-Prot:P15770" /db_xref="EcoGene:EG10077" /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTD GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK LFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKG KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA" gene complement(3293570..3294142) /gene="tsaC" /locus_tag="b3282" /gene_synonym="ECK3269" /gene_synonym="JW3243" /gene_synonym="rimN" /gene_synonym="yrdC" /db_xref="EcoGene:EG12840" CDS complement(3293570..3294142) /gene="tsaC" /locus_tag="b3282" /gene_synonym="ECK3269" /gene_synonym="JW3243" /gene_synonym="rimN" /gene_synonym="yrdC" /function="enzyme; tRNA modification" /codon_start=1 /transl_table=11 /product="tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase" /protein_id="AAC76307.1" /db_xref="GI:2367210" /db_xref="ASAP:ABE-0010766" /db_xref="UniProtKB/Swiss-Prot:P45748" /db_xref="EcoGene:EG12840" /translation="MNNNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPAT TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA AFPVVPGETGGRLNPSEIRDALTGELFRQG" gene complement(3294147..3294689) /gene="yrdD" /locus_tag="b3283" /gene_synonym="ECK3270" /gene_synonym="JW5949" /db_xref="EcoGene:EG12841" CDS complement(3294147..3294689) /gene="yrdD" /locus_tag="b3283" /gene_synonym="ECK3270" /gene_synonym="JW5949" /function="putative enzyme; Not classified" /note="putative DNA topoisomerase" /codon_start=1 /transl_table=11 /product="ssDNA-binding protein, function unknown" /protein_id="AAT48175.1" /db_xref="GI:48994931" /db_xref="ASAP:ABE-0010768" /db_xref="UniProtKB/Swiss-Prot:P45771" /db_xref="EcoGene:EG12841" /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDET AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT AQGVKHFCASKQCGKPVSAE" gene complement(3294718..3295191) /gene="smg" /locus_tag="b3284" /gene_synonym="ECK3271" /gene_synonym="JW3245" /db_xref="EcoGene:EG11605" CDS complement(3294718..3295191) /gene="smg" /locus_tag="b3284" /gene_synonym="ECK3271" /gene_synonym="JW3245" /codon_start=1 /transl_table=11 /product="DUF494 family putative periplasmic protein" /protein_id="AAC76309.1" /db_xref="GI:1789679" /db_xref="ASAP:ABE-0010770" /db_xref="UniProtKB/Swiss-Prot:P0A828" /db_xref="EcoGene:EG11605" /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNAL LWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLET REMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH" gene complement(3295163..3296287) /gene="smf" /locus_tag="b4473" /gene_synonym="ECK3272" /gene_synonym="JW5708" /db_xref="EcoGene:EG11604" CDS complement(3295163..3296287) /gene="smf" /locus_tag="b4473" /gene_synonym="ECK3272" /gene_synonym="JW5708" /codon_start=1 /transl_table=11 /product="DNA recombination-mediator A family protein" /protein_id="AAT48176.1" /db_xref="GI:48994932" /db_xref="ASAP:ABE-0174103" /db_xref="UniProtKB/Swiss-Prot:P30852" /db_xref="EcoGene:EG11604" /translation="MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL HALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV" gene 3296417..3296926 /gene="def" /locus_tag="b3287" /gene_synonym="ECK3273" /gene_synonym="fms" /gene_synonym="JW3248" /db_xref="EcoGene:EG11440" CDS 3296417..3296926 /gene="def" /locus_tag="b3287" /gene_synonym="ECK3273" /gene_synonym="fms" /gene_synonym="JW3248" /EC_number="3.5.1.88" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="AAC76312.1" /db_xref="GI:1789682" /db_xref="ASAP:ABE-0010779" /db_xref="UniProtKB/Swiss-Prot:P0A6K3" /db_xref="EcoGene:EG11440" /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE KLDRLKARA" gene 3296941..3297888 /gene="fmt" /locus_tag="b3288" /gene_synonym="ECK3274" /gene_synonym="JW3249" /gene_synonym="yhdD" /db_xref="EcoGene:EG11268" CDS 3296941..3297888 /gene="fmt" /locus_tag="b3288" /gene_synonym="ECK3274" /gene_synonym="JW3249" /gene_synonym="yhdD" /EC_number="2.1.2.9" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase" /protein_id="AAC76313.1" /db_xref="GI:1789683" /db_xref="ASAP:ABE-0010781" /db_xref="UniProtKB/Swiss-Prot:P23882" /db_xref="EcoGene:EG11268" /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEM PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS LSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVA TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV" gene 3297934..3299223 /gene="rsmB" /locus_tag="b3289" /gene_synonym="ECK3275" /gene_synonym="fmu" /gene_synonym="fmv" /gene_synonym="JW3250" /gene_synonym="rrmB" /gene_synonym="sun" /gene_synonym="yhdB" /db_xref="EcoGene:EG12163" CDS 3297934..3299223 /gene="rsmB" /locus_tag="b3289" /gene_synonym="ECK3275" /gene_synonym="fmu" /gene_synonym="fmv" /gene_synonym="JW3250" /gene_synonym="rrmB" /gene_synonym="sun" /gene_synonym="yhdB" /EC_number="2.1.1.61" /function="enzyme; rRNA modification" /experiment="N-terminus verified by Edman degradation: PMID 10026269" /note="16S rRNA m5C967 methyltransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009451 - RNA modification" /codon_start=1 /transl_table=11 /product="16S rRNA m(5)C967 methyltransferase, SAM-dependent" /protein_id="AAC76314.1" /db_xref="GI:2367212" /db_xref="ASAP:ABE-0010785" /db_xref="UniProtKB/Swiss-Prot:P36929" /db_xref="EcoGene:EG12163" /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQ WQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH PDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK" gene 3299245..3300621 /gene="trkA" /locus_tag="b3290" /gene_synonym="ECK3276" /gene_synonym="JW3251" /gene_synonym="sapG" /db_xref="EcoGene:EG11019" CDS 3299245..3300621 /gene="trkA" /locus_tag="b3290" /gene_synonym="ECK3276" /gene_synonym="JW3251" /gene_synonym="sapG" /function="transport; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 8412700" /note="transport of potassium; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="NAD-binding component of TrK potassium transporter" /protein_id="AAC76315.1" /db_xref="GI:1789685" /db_xref="ASAP:ABE-0010787" /db_xref="UniProtKB/Swiss-Prot:P0AGI8" /db_xref="EcoGene:EG11019" /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL FQPSPFFL" gene 3300751..3301161 /gene="mscL" /locus_tag="b3291" /gene_synonym="ECK3277" /gene_synonym="JW3252" /gene_synonym="stkA" /gene_synonym="yhdC" /db_xref="EcoGene:EG11180" CDS 3300751..3301161 /gene="mscL" /locus_tag="b3291" /gene_synonym="ECK3277" /gene_synonym="JW3252" /gene_synonym="stkA" /gene_synonym="yhdC" /function="transport; Transport of small molecules: Other" /experiment="N-terminus verified by Edman degradation: PMID 7511799" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="mechanosensitive channel protein, high conductance" /protein_id="AAC76316.1" /db_xref="GI:1789686" /db_xref="ASAP:ABE-0010790" /db_xref="UniProtKB/Swiss-Prot:P0A742" /db_xref="EcoGene:EG11180" /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL NRKKEEPAAAPAPTKEEVLLTEIRDLLKEQNNRS" gene complement(3301158..3301376) /gene="arfA" /locus_tag="b4550" /gene_synonym="ECK3278" /gene_synonym="JW3253" /gene_synonym="yhdL" /db_xref="EcoGene:EG11968" CDS complement(3301158..3301376) /gene="arfA" /locus_tag="b4550" /gene_synonym="ECK3278" /gene_synonym="JW3253" /gene_synonym="yhdL" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="alternate ribosome-rescue factor A" /protein_id="ABD18700.1" /db_xref="GI:87082241" /db_xref="ASAP:ABE-0285071" /db_xref="UniProtKB/Swiss-Prot:P36675" /db_xref="EcoGene:EG11968" /translation="MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK HGNRGNWEASGKKVNHFFTTGLLLSGAC" gene complement(3301432..3301857) /gene="zntR" /locus_tag="b3292" /gene_synonym="ECK3279" /gene_synonym="JW3254" /gene_synonym="yhdM" /db_xref="EcoGene:EG11969" CDS complement(3301432..3301857) /gene="zntR" /locus_tag="b3292" /gene_synonym="ECK3279" /gene_synonym="JW3254" /gene_synonym="yhdM" /function="putative regulator; Not classified" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_process: GO:0006350 - transcription; GO_process: GO:0006805 - xenobiotic metabolic process" /codon_start=1 /transl_table=11 /product="zntA gene transcriptional activator" /protein_id="AAC76317.1" /db_xref="GI:1789687" /db_xref="ASAP:ABE-0010793" /db_xref="UniProtKB/Swiss-Prot:P0ACS5" /db_xref="EcoGene:EG11969" /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC" gene complement(3301868..3302236) /gene="yhdN" /locus_tag="b3293" /gene_synonym="ECK3280" /gene_synonym="JW3255" /db_xref="EcoGene:EG11970" CDS complement(3301868..3302236) /gene="yhdN" /locus_tag="b3293" /gene_synonym="ECK3280" /gene_synonym="JW3255" /codon_start=1 /transl_table=11 /product="DUF1992 family protein" /protein_id="AAC76318.1" /db_xref="GI:1789688" /db_xref="ASAP:ABE-0010795" /db_xref="UniProtKB/Swiss-Prot:P36677" /db_xref="EcoGene:EG11970" /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR AGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGL STDFLRGDYADKLLDKINDN" gene complement(3302343..3302726) /gene="rplQ" /locus_tag="b3294" /gene_synonym="ECK3281" /gene_synonym="JW3256" /db_xref="EcoGene:EG10878" CDS complement(3302343..3302726) /gene="rplQ" /locus_tag="b3294" /gene_synonym="ECK3281" /gene_synonym="JW3256" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 1098937,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L17" /protein_id="AAC76319.1" /db_xref="GI:1789689" /db_xref="ASAP:ABE-0010799" /db_xref="UniProtKB/Swiss-Prot:P0AG44" /db_xref="EcoGene:EG10878" /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF RAGDNAPMAYIELVDRSEKAEAAAE" gene complement(3302767..3303756) /gene="rpoA" /locus_tag="b3295" /gene_synonym="ECK3282" /gene_synonym="JW3257" /gene_synonym="pez" /gene_synonym="phs" /gene_synonym="sez" /db_xref="EcoGene:EG10893" CDS complement(3302767..3303756) /gene="rpoA" /locus_tag="b3295" /gene_synonym="ECK3282" /gene_synonym="JW3257" /gene_synonym="pez" /gene_synonym="phs" /gene_synonym="sez" /EC_number="2.7.7.6" /function="enzyme; RNA synthesis, modification, DNA transcription" /experiment="N-terminus verified by Edman degradation: PMID 387752,1095419,9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="RNA polymerase, alpha subunit" /protein_id="AAC76320.1" /db_xref="GI:1789690" /db_xref="ASAP:ABE-0010802" /db_xref="UniProtKB/Swiss-Prot:P0A7Z4" /db_xref="EcoGene:EG10893" /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE" gene complement(3303782..3304402) /gene="rpsD" /locus_tag="b3296" /gene_synonym="ECK3283" /gene_synonym="JW3258" /gene_synonym="ramA" /gene_synonym="sud" /db_xref="EcoGene:EG10903" CDS complement(3303782..3304402) /gene="rpsD" /locus_tag="b3296" /gene_synonym="ECK3283" /gene_synonym="JW3258" /gene_synonym="ramA" /gene_synonym="sud" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S4" /protein_id="AAC76321.1" /db_xref="GI:1789691" /db_xref="ASAP:ABE-0010805" /db_xref="UniProtKB/Swiss-Prot:P0A7V8" /db_xref="EcoGene:EG10903" /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK" gene complement(3304436..3304825) /gene="rpsK" /locus_tag="b3297" /gene_synonym="ECK3284" /gene_synonym="JW3259" /db_xref="EcoGene:EG10910" CDS complement(3304436..3304825) /gene="rpsK" /locus_tag="b3297" /gene_synonym="ECK3284" /gene_synonym="JW3259" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S11" /protein_id="AAC76322.1" /db_xref="GI:1789692" /db_xref="ASAP:ABE-0010807" /db_xref="UniProtKB/Swiss-Prot:P0A7R9" /db_xref="EcoGene:EG10910" /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA AGFRITNITDVTPIPHNGCRPPKKRRV" gene complement(3304842..3305198) /gene="rpsM" /locus_tag="b3298" /gene_synonym="ECK3285" /gene_synonym="JW3260" /db_xref="EcoGene:EG10912" CDS complement(3304842..3305198) /gene="rpsM" /locus_tag="b3298" /gene_synonym="ECK3285" /gene_synonym="JW3260" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S13" /protein_id="AAC76323.1" /db_xref="GI:1789693" /db_xref="ASAP:ABE-0010809" /db_xref="UniProtKB/Swiss-Prot:P0A7S9" /db_xref="EcoGene:EG10912" /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT KTNARTRKGPRKPIKK" gene complement(3305345..3305461) /gene="rpmJ" /locus_tag="b3299" /gene_synonym="ECK3286" /gene_synonym="JW3261" /gene_synonym="secX" /db_xref="EcoGene:EG11232" CDS complement(3305345..3305461) /gene="rpmJ" /locus_tag="b3299" /gene_synonym="ECK3286" /gene_synonym="JW3261" /gene_synonym="secX" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 3542048,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L36" /protein_id="AAC76324.1" /db_xref="GI:1789695" /db_xref="ASAP:ABE-0010812" /db_xref="UniProtKB/Swiss-Prot:P0A7Q6" /db_xref="EcoGene:EG11232" /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG" gene complement(3305493..3306824) /gene="secY" /locus_tag="b3300" /gene_synonym="ECK3287" /gene_synonym="JW3262" /gene_synonym="prlA" /db_xref="EcoGene:EG10766" CDS complement(3305493..3306824) /gene="secY" /locus_tag="b3300" /gene_synonym="ECK3287" /gene_synonym="JW3262" /gene_synonym="prlA" /function="putative transport; Not classified" /note="putative ATPase subunit of translocase; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="preprotein translocase membrane subunit" /protein_id="AAC76325.1" /db_xref="GI:1789696" /db_xref="ASAP:ABE-0010814" /db_xref="UniProtKB/Swiss-Prot:P0AGA2" /db_xref="EcoGene:EG10766" /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR" gene complement(3306832..3307266) /gene="rplO" /locus_tag="b3301" /gene_synonym="ECK3288" /gene_synonym="JW3263" /db_xref="EcoGene:EG10876" CDS complement(3306832..3307266) /gene="rplO" /locus_tag="b3301" /gene_synonym="ECK3288" /gene_synonym="JW3263" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 340263" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L15" /protein_id="AAC76326.1" /db_xref="GI:1789697" /db_xref="ASAP:ABE-0010819" /db_xref="UniProtKB/Swiss-Prot:P02413" /db_xref="EcoGene:EG10876" /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIG IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE" gene complement(3307270..3307449) /gene="rpmD" /locus_tag="b3302" /gene_synonym="ECK3289" /gene_synonym="JW3264" /db_xref="EcoGene:EG10888" CDS complement(3307270..3307449) /gene="rpmD" /locus_tag="b3302" /gene_synonym="ECK3289" /gene_synonym="JW3264" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L30" /protein_id="AAC76327.1" /db_xref="GI:1789698" /db_xref="ASAP:ABE-0010821" /db_xref="UniProtKB/Swiss-Prot:P0AG51" /db_xref="EcoGene:EG10888" /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI RGMINAVSFMVKVEE" gene complement(3307453..3307956) /gene="rpsE" /locus_tag="b3303" /gene_synonym="ECK3290" /gene_synonym="eps" /gene_synonym="JW3265" /gene_synonym="spc" /gene_synonym="spcA" /db_xref="EcoGene:EG10904" CDS complement(3307453..3307956) /gene="rpsE" /locus_tag="b3303" /gene_synonym="ECK3290" /gene_synonym="eps" /gene_synonym="JW3265" /gene_synonym="spc" /gene_synonym="spcA" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S5" /protein_id="AAC76328.1" /db_xref="GI:1789699" /db_xref="ASAP:ABE-0010823" /db_xref="UniProtKB/Swiss-Prot:P0A7W1" /db_xref="EcoGene:EG10904" /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS VEEILGK" gene complement(3307971..3308324) /gene="rplR" /locus_tag="b3304" /gene_synonym="ECK3291" /gene_synonym="JW3266" /db_xref="EcoGene:EG10879" CDS complement(3307971..3308324) /gene="rplR" /locus_tag="b3304" /gene_synonym="ECK3291" /gene_synonym="JW3266" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 1098937,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L18" /protein_id="AAC76329.1" /db_xref="GI:1789700" /db_xref="ASAP:ABE-0010825" /db_xref="UniProtKB/Swiss-Prot:P0C018" /db_xref="EcoGene:EG10879" /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR VQALADAAREAGLQF" gene complement(3308334..3308867) /gene="rplF" /locus_tag="b3305" /gene_synonym="ECK3292" /gene_synonym="JW3267" /db_xref="EcoGene:EG10869" CDS complement(3308334..3308867) /gene="rplF" /locus_tag="b3305" /gene_synonym="ECK3292" /gene_synonym="JW3267" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L6" /protein_id="AAC76330.1" /db_xref="GI:1789701" /db_xref="ASAP:ABE-0010827" /db_xref="UniProtKB/Swiss-Prot:P0AG55" /db_xref="EcoGene:EG10869" /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK GVRYADEVVRTKEAKKK" gene complement(3308880..3309272) /gene="rpsH" /locus_tag="b3306" /gene_synonym="ECK3293" /gene_synonym="JW3268" /db_xref="EcoGene:EG10907" CDS complement(3308880..3309272) /gene="rpsH" /locus_tag="b3306" /gene_synonym="ECK3293" /gene_synonym="JW3268" /function="structural component; Ribosomal proteins - synthesis, modification" /note="30S ribosomal subunit protein S8, and regulator; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation; GO_process: GO:0009386 - translational attenuation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S8" /protein_id="AAC76331.1" /db_xref="GI:1789702" /db_xref="ASAP:ABE-0010829" /db_xref="UniProtKB/Swiss-Prot:P0A7W7" /db_xref="EcoGene:EG10907" /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA VVSTSKGVMTDRAARQAGLGGEIICYVA" gene complement(3309306..3309611) /gene="rpsN" /locus_tag="b3307" /gene_synonym="ECK3294" /gene_synonym="JW3269" /db_xref="EcoGene:EG10913" CDS complement(3309306..3309611) /gene="rpsN" /locus_tag="b3307" /gene_synonym="ECK3294" /gene_synonym="JW3269" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S14" /protein_id="AAC76332.1" /db_xref="GI:1789703" /db_xref="ASAP:ABE-0010831" /db_xref="UniProtKB/Swiss-Prot:P0AG59" /db_xref="EcoGene:EG10913" /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW" gene complement(3309626..3310165) /gene="rplE" /locus_tag="b3308" /gene_synonym="ECK3295" /gene_synonym="JW3270" /db_xref="EcoGene:EG10868" CDS complement(3309626..3310165) /gene="rplE" /locus_tag="b3308" /gene_synonym="ECK3295" /gene_synonym="JW3270" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L5" /protein_id="AAC76333.1" /db_xref="GI:1789704" /db_xref="ASAP:ABE-0010833" /db_xref="UniProtKB/Swiss-Prot:P62399" /db_xref="EcoGene:EG10868" /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA KSDEEGRALLAAFDFPFRK" gene complement(3310180..3310494) /gene="rplX" /locus_tag="b3309" /gene_synonym="ECK3296" /gene_synonym="JW3271" /db_xref="EcoGene:EG10884" CDS complement(3310180..3310494) /gene="rplX" /locus_tag="b3309" /gene_synonym="ECK3296" /gene_synonym="JW3271" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L24" /protein_id="AAC76334.1" /db_xref="GI:1789705" /db_xref="ASAP:ABE-0010835" /db_xref="UniProtKB/Swiss-Prot:P60624" /db_xref="EcoGene:EG10884" /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET IK" gene complement(3310505..3310876) /gene="rplN" /locus_tag="b3310" /gene_synonym="ECK3297" /gene_synonym="JW3272" /db_xref="EcoGene:EG10875" CDS complement(3310505..3310876) /gene="rplN" /locus_tag="b3310" /gene_synonym="ECK3297" /gene_synonym="JW3272" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 352727" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L14" /protein_id="AAC76335.1" /db_xref="GI:1789706" /db_xref="ASAP:ABE-0010837" /db_xref="UniProtKB/Swiss-Prot:P0ADY3" /db_xref="EcoGene:EG10875" /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP VTRELRSEKFMKIISLAPEVL" gene complement(3311041..3311295) /gene="rpsQ" /locus_tag="b3311" /gene_synonym="ECK3298" /gene_synonym="JW3273" /gene_synonym="neaA" /db_xref="EcoGene:EG10916" CDS complement(3311041..3311295) /gene="rpsQ" /locus_tag="b3311" /gene_synonym="ECK3298" /gene_synonym="JW3273" /gene_synonym="neaA" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S17" /protein_id="AAC76336.1" /db_xref="GI:1789707" /db_xref="ASAP:ABE-0010840" /db_xref="UniProtKB/Swiss-Prot:P0AG63" /db_xref="EcoGene:EG10916" /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL" gene complement(3311295..3311486) /gene="rpmC" /locus_tag="b3312" /gene_synonym="ECK3299" /gene_synonym="JW3274" /db_xref="EcoGene:EG10887" CDS complement(3311295..3311486) /gene="rpmC" /locus_tag="b3312" /gene_synonym="ECK3299" /gene_synonym="JW3274" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 1092361,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L29" /protein_id="AAC76337.1" /db_xref="GI:1789708" /db_xref="ASAP:ABE-0010842" /db_xref="UniProtKB/Swiss-Prot:P0A7M6" /db_xref="EcoGene:EG10887" /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK QVRRDVARVKTLLNEKAGA" gene complement(3311486..3311896) /gene="rplP" /locus_tag="b3313" /gene_synonym="ECK3300" /gene_synonym="JW3275" /db_xref="EcoGene:EG10877" CDS complement(3311486..3311896) /gene="rplP" /locus_tag="b3313" /gene_synonym="ECK3300" /gene_synonym="JW3275" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 786730" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L16" /protein_id="AAC76338.1" /db_xref="GI:1789709" /db_xref="ASAP:ABE-0010846" /db_xref="UniProtKB/Swiss-Prot:P0ADY7" /db_xref="EcoGene:EG10877" /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM" gene complement(3311909..3312610) /gene="rpsC" /locus_tag="b3314" /gene_synonym="ECK3301" /gene_synonym="JW3276" /db_xref="EcoGene:EG10902" CDS complement(3311909..3312610) /gene="rpsC" /locus_tag="b3314" /gene_synonym="ECK3301" /gene_synonym="JW3276" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S3" /protein_id="AAC76339.1" /db_xref="GI:1789710" /db_xref="ASAP:ABE-0010848" /db_xref="UniProtKB/Swiss-Prot:P0A7V3" /db_xref="EcoGene:EG10902" /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE KPAAQPKKQQRKGRK" gene complement(3312628..3312960) /gene="rplV" /locus_tag="b3315" /gene_synonym="ECK3302" /gene_synonym="eryB" /gene_synonym="JW3277" /db_xref="EcoGene:EG10882" CDS complement(3312628..3312960) /gene="rplV" /locus_tag="b3315" /gene_synonym="ECK3302" /gene_synonym="eryB" /gene_synonym="JW3277" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 7007072" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L22" /protein_id="AAC76340.1" /db_xref="GI:1789711" /db_xref="ASAP:ABE-0010850" /db_xref="UniProtKB/Swiss-Prot:P61175" /db_xref="EcoGene:EG10882" /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH ITVVVSDR" gene complement(3312975..3313253) /gene="rpsS" /locus_tag="b3316" /gene_synonym="ECK3303" /gene_synonym="JW3278" /db_xref="EcoGene:EG10918" CDS complement(3312975..3313253) /gene="rpsS" /locus_tag="b3316" /gene_synonym="ECK3303" /gene_synonym="JW3278" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S19" /protein_id="AAC76341.1" /db_xref="GI:1789712" /db_xref="ASAP:ABE-0010852" /db_xref="UniProtKB/Swiss-Prot:P0A7U3" /db_xref="EcoGene:EG10918" /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK" gene complement(3313270..3314091) /gene="rplB" /locus_tag="b3317" /gene_synonym="ECK3304" /gene_synonym="JW3279" /db_xref="EcoGene:EG10865" CDS complement(3313270..3314091) /gene="rplB" /locus_tag="b3317" /gene_synonym="ECK3304" /gene_synonym="JW3279" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L2" /protein_id="AAC76342.1" /db_xref="GI:1789713" /db_xref="ASAP:ABE-0010854" /db_xref="UniProtKB/Swiss-Prot:P60422" /db_xref="EcoGene:EG10865" /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK" gene complement(3314109..3314411) /gene="rplW" /locus_tag="b3318" /gene_synonym="ECK3305" /gene_synonym="JW3280" /db_xref="EcoGene:EG10883" CDS complement(3314109..3314411) /gene="rplW" /locus_tag="b3318" /gene_synonym="ECK3305" /gene_synonym="JW3280" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 391594" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L23" /protein_id="AAC76343.1" /db_xref="GI:1789714" /db_xref="ASAP:ABE-0010856" /db_xref="UniProtKB/Swiss-Prot:P0ADZ0" /db_xref="EcoGene:EG10883" /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE" gene complement(3314408..3315013) /gene="rplD" /locus_tag="b3319" /gene_synonym="ECK3306" /gene_synonym="eryA" /gene_synonym="JW3281" /db_xref="EcoGene:EG10867" CDS complement(3314408..3315013) /gene="rplD" /locus_tag="b3319" /gene_synonym="ECK3306" /gene_synonym="eryA" /gene_synonym="JW3281" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 9298646" /note="50S ribosomal subunit protein L4, regulates expression of S10 operon; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation; GO_process: GO:0006355 - regulation of transcription, DNA-dependent; GO_process: GO:0009386 - translational attenuation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L4" /protein_id="AAC76344.1" /db_xref="GI:1789715" /db_xref="ASAP:ABE-0010858" /db_xref="UniProtKB/Swiss-Prot:P60723" /db_xref="EcoGene:EG10867" /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA" gene complement(3315024..3315653) /gene="rplC" /locus_tag="b3320" /gene_synonym="ECK3307" /gene_synonym="JW3282" /db_xref="EcoGene:EG10866" CDS complement(3315024..3315653) /gene="rplC" /locus_tag="b3320" /gene_synonym="ECK3307" /gene_synonym="JW3282" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 365579,9298646,10739205" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="50S ribosomal subunit protein L3" /protein_id="AAC76345.1" /db_xref="GI:1789716" /db_xref="ASAP:ABE-0010860" /db_xref="UniProtKB/Swiss-Prot:P60438" /db_xref="EcoGene:EG10866" /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA" gene complement(3315686..3315997) /gene="rpsJ" /locus_tag="b3321" /gene_synonym="ECK3308" /gene_synonym="JW3283" /gene_synonym="nusE" /db_xref="EcoGene:EG10909" CDS complement(3315686..3315997) /gene="rpsJ" /locus_tag="b3321" /gene_synonym="ECK3308" /gene_synonym="JW3283" /gene_synonym="nusE" /function="structural component; Ribosomal proteins - synthesis, modification" /experiment="N-terminus verified by Edman degradation: PMID 7007073,9298646" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S10" /protein_id="AAC76346.1" /db_xref="GI:1789717" /db_xref="ASAP:ABE-0010862" /db_xref="UniProtKB/Swiss-Prot:P0A7R5" /db_xref="EcoGene:EG10909" /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL G" gene complement(3316235..3316654) /gene="gspB" /locus_tag="b3322" /gene_synonym="ECK3309" /gene_synonym="JW3284" /gene_synonym="pinO" /gene_synonym="pioO" /db_xref="EcoGene:EG11263" CDS complement(3316235..3316654) /gene="gspB" /locus_tag="b3322" /gene_synonym="ECK3309" /gene_synonym="JW3284" /gene_synonym="pinO" /gene_synonym="pioO" /function="factor; DNA - replication, repair, restriction/modification" /note="calcium-binding protein required for initiation of chromosome replication; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006261 - DNA-dependent DNA replication" /codon_start=1 /transl_table=11 /product="part of gsp divergon involved in type II protein secretion" /protein_id="AAC76347.1" /db_xref="GI:1789719" /db_xref="ASAP:ABE-0010865" /db_xref="UniProtKB/Swiss-Prot:P03825" /db_xref="EcoGene:EG11263" /translation="MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGM VLVGGYARQLWVLWIVKAEVTVEAETPAFKQSTQHYFFKKQPLPVVESVEEEDDPGVA VENAPSSSEDEENTVEESEEKAGLRERVKNALNELER" gene complement(3316656..3318125) /gene="gspA" /locus_tag="b3323" /gene_synonym="ECK3310" /gene_synonym="JW3285" /gene_synonym="yheD" /db_xref="EcoGene:EG12888" CDS complement(3316656..3318125) /gene="gspA" /locus_tag="b3323" /gene_synonym="ECK3310" /gene_synonym="JW3285" /gene_synonym="yheD" /function="putative transport; Not classified" /note="putative export protein A for general secretion pathway (GSP)" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76348.1" /db_xref="GI:1789720" /db_xref="ASAP:ABE-0010867" /db_xref="UniProtKB/Swiss-Prot:P45756" /db_xref="EcoGene:EG12888" /translation="MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKH RRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLI IIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEH ELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFT AKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPV VKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTL VDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLW KMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLK TDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK" gene 3318305..3319120 /gene="gspC" /locus_tag="b3324" /gene_synonym="ECK3311" /gene_synonym="JW3286" /gene_synonym="yheE" /db_xref="EcoGene:EG12889" CDS 3318305..3319120 /gene="gspC" /locus_tag="b3324" /gene_synonym="ECK3311" /gene_synonym="JW3286" /gene_synonym="yheE" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76349.1" /db_xref="GI:1789721" /db_xref="ASAP:ABE-0010877" /db_xref="UniProtKB/Swiss-Prot:P45757" /db_xref="EcoGene:EG12889" /translation="MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVK NGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSND ETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI IKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNL SLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ" gene 3319104..3321056 /gene="gspD" /locus_tag="b3325" /gene_synonym="ECK3312" /gene_synonym="JW5707" /gene_synonym="yheF" /db_xref="EcoGene:EG12890" CDS 3319104..3321056 /gene="gspD" /locus_tag="b3325" /gene_synonym="ECK3312" /gene_synonym="JW5707" /gene_synonym="yheF" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76350.2" /db_xref="GI:87082242" /db_xref="ASAP:ABE-0010879" /db_xref="UniProtKB/Swiss-Prot:P45758" /db_xref="EcoGene:EG12890" /translation="MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIV GQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVR SANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYE PSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHG KSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYA KATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKL ATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQG VADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVT LDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIE QEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDI PLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSK ALVGSEDLPVLDENTFNSHAPAPSSR" gene 3321066..3322547 /gene="gspE" /locus_tag="b3326" /gene_synonym="ECK3313" /gene_synonym="JW3288" /gene_synonym="yheG" /db_xref="EcoGene:EG12891" CDS 3321066..3322547 /gene="gspE" /locus_tag="b3326" /gene_synonym="ECK3313" /gene_synonym="JW3288" /gene_synonym="yheG" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76351.1" /db_xref="GI:1789723" /db_xref="ASAP:ABE-0010881" /db_xref="UniProtKB/Swiss-Prot:P45759" /db_xref="EcoGene:EG12891" /translation="MRIHSPYPASWALAQRIGYLYSEGEIIYLADTPFERLLDIQRQV GQCQTMTSLSQADFEARLEAVFHQNTGESQQIAQDIDQSVDLLSLSEEMPANEDLLNE DSAAPVIRLINAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALL ISRIKVMARLDIAEKRIPQDGRISLRIGRRNIDVRVSTLPSIYGERAVLRLLDKNSLQ LSLNNLGMTAADKQDLENLIQLPHGIILVTGPTGSGKSTTLYAILSALNTPGRNILTV EDPVEYELEGIGQTQVNTRVDMSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASL TGHLVLSTLHTNSASGAVTRLRDMGVESFLLSSSLAGIIAQRLVRRLCPQCRQFTPVS PQQAQMFKYHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQ ALERLVRQQHKALIKNGLQKVISGDTSWDEVMRVASATLESEA" gene 3322544..3323740 /gene="gspF" /locus_tag="b3327" /gene_synonym="ECK3314" /gene_synonym="hofF" /gene_synonym="hopF" /gene_synonym="JW3289" /db_xref="EcoGene:EG12885" CDS 3322544..3323740 /gene="gspF" /locus_tag="b3327" /gene_synonym="ECK3314" /gene_synonym="hofF" /gene_synonym="hopF" /gene_synonym="JW3289" /function="putative transport; Not classified" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76352.1" /db_xref="GI:1789724" /db_xref="ASAP:ABE-0010883" /db_xref="UniProtKB/Swiss-Prot:P41441" /db_xref="EcoGene:EG12885" /translation="MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQ KSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEESLAVIGQQSSNKRLGDVLNQVR SAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKL IQSLIYPCMLTTVAIGVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTG PTLLATVFIVAVGFWLWLKRGNNRHRFHAMLLRVALIGPLICAINSARYLRTLSILQS SGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQTAIFPPMMLYMVAS GEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQ LNSMIN" gene 3323750..3324187 /gene="gspG" /locus_tag="b3328" /gene_synonym="ECK3315" /gene_synonym="hofG" /gene_synonym="hopG" /gene_synonym="JW3290" /db_xref="EcoGene:EG12886" CDS 3323750..3324187 /gene="gspG" /locus_tag="b3328" /gene_synonym="ECK3315" /gene_synonym="hofG" /gene_synonym="hopG" /gene_synonym="JW3290" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="pseudopilin, cryptic, general secretion pathway" /protein_id="AAC76353.1" /db_xref="GI:1789725" /db_xref="ASAP:ABE-0010885" /db_xref="UniProtKB/Swiss-Prot:P41442" /db_xref="EcoGene:EG12886" /translation="MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQK AVSDIVALENALDMYKLDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADP WGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK" gene 3324195..3324704 /gene="gspH" /locus_tag="b3329" /gene_synonym="ECK3316" /gene_synonym="hofH" /gene_synonym="hopH" /gene_synonym="JW3291" /db_xref="EcoGene:EG12887" CDS 3324195..3324704 /gene="gspH" /locus_tag="b3329" /gene_synonym="ECK3316" /gene_synonym="hofH" /gene_synonym="hopH" /gene_synonym="JW3291" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="putative general secretory pathway component, cryptic" /protein_id="AAC76354.1" /db_xref="GI:1789726" /db_xref="ASAP:ABE-0010888" /db_xref="UniProtKB/Swiss-Prot:P41443" /db_xref="EcoGene:EG12887" /translation="MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETA ARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQND WDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLD QTLARDTRP" gene 3324701..3325078 /gene="gspI" /locus_tag="b3330" /gene_synonym="ECK3317" /gene_synonym="JW5706" /gene_synonym="yheH" /db_xref="EcoGene:EG12892" CDS 3324701..3325078 /gene="gspI" /locus_tag="b3330" /gene_synonym="ECK3317" /gene_synonym="JW5706" /gene_synonym="yheH" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76355.2" /db_xref="GI:87082243" /db_xref="ASAP:ABE-0010890" /db_xref="UniProtKB/Swiss-Prot:P45760" /db_xref="EcoGene:EG12892" /translation="MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNET LALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLP SGQTTSLTRYQSIDNKSGQAQDD" gene 3325071..3325658 /gene="gspJ" /locus_tag="b3331" /gene_synonym="ECK3318" /gene_synonym="JW3293" /gene_synonym="yheI" /db_xref="EcoGene:EG12893" CDS 3325071..3325658 /gene="gspJ" /locus_tag="b3331" /gene_synonym="ECK3318" /gene_synonym="JW3293" /gene_synonym="yheI" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="putative general secretory pathway component, cryptic" /protein_id="AAC76356.1" /db_xref="GI:1789728" /db_xref="ASAP:ABE-0010892" /db_xref="UniProtKB/Swiss-Prot:P45761" /db_xref="EcoGene:EG12893" /translation="MINRQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKE IQQFNQLQRTITILDNDLLQLVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTL LTVHWYLRNHTLYRAVRTSVDGRKDQPAQAMLEHVESFLLESNSGESQELPLSVTLHL QTQQYGGLQRRFALPEQLAREESPAQTQAGNNNHE" gene 3325651..3326634 /gene="gspK" /locus_tag="b3332" /gene_synonym="ECK3319" /gene_synonym="JW3294" /gene_synonym="yheJ" /db_xref="EcoGene:EG12894" CDS 3325651..3326634 /gene="gspK" /locus_tag="b3332" /gene_synonym="ECK3319" /gene_synonym="JW3294" /gene_synonym="yheJ" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76357.1" /db_xref="GI:1789729" /db_xref="ASAP:ABE-0010894" /db_xref="UniProtKB/Swiss-Prot:P45762" /db_xref="EcoGene:EG12894" /translation="MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHH LQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQH CFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRF HGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINL NMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVA QVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY" gene 3326649..3327812 /gene="gspL" /locus_tag="b3333" /gene_synonym="ECK3320" /gene_synonym="JW5705" /gene_synonym="yheK" /db_xref="EcoGene:EG12895" CDS 3326649..3327812 /gene="gspL" /locus_tag="b3333" /gene_synonym="ECK3320" /gene_synonym="JW5705" /gene_synonym="yheK" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76358.2" /db_xref="GI:87082244" /db_xref="ASAP:ABE-0010896" /db_xref="UniProtKB/Swiss-Prot:P45763" /db_xref="EcoGene:EG12895" /translation="MPESLMVIRSSSTLRKHWEWMTFSADSVSSVHTLTDDLPLESLA DQPGAGNVHLLIPPEGLLYRSLTLPNAKYKLTAQTLQWLAEETLPDNTQDWHWTVVDK QNESVEVIGIQSEKLSRYLERLHTAGLNVTRVLPDGCYLPWEVDSWTLVNQQTSWLIR SAAHAFNELDEHWLQHLAAQFPPENMLCYGVVPHGVAAANPLIQHPEIPSLSLYSADI AFQRYDMLHGIFRKQKTVSKSGKWLARLAVSCLVLAILSFVGSRSIALWHTLKIEDQL QQQQQETWQRYFPQIKRTHNFRFYFKQQLAQQYPEAVPLLYHLQTLLLEHPELQLMEA NYSQKQKSLTLKMSAKSEANIDRFCELTQSWLPMEKTEKDPVSGVWTVRNSGK" gene 3327809..3328270 /gene="gspM" /locus_tag="b3334" /gene_synonym="ECK3321" /gene_synonym="hopZ" /gene_synonym="JW5704" /gene_synonym="pshM" /db_xref="EcoGene:EG12173" CDS 3327809..3328270 /gene="gspM" /locus_tag="b3334" /gene_synonym="ECK3321" /gene_synonym="hopZ" /gene_synonym="JW5704" /gene_synonym="pshM" /function="putative transport; Not classified" /codon_start=1 /transl_table=11 /product="general secretory pathway component, cryptic" /protein_id="AAC76359.2" /db_xref="GI:87082245" /db_xref="ASAP:ABE-0010898" /db_xref="UniProtKB/Swiss-Prot:P36678" /db_xref="EcoGene:EG12173" /translation="MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLGVIKPIDTYIAEH QSHAQKIKKDIKWMQDQASTHGLLGHPALTQPIKNILLEEAKRENLAITLENGPDNTL TIHPVTAPLENVSRWLTTAQVTYGIVIEDLQFTLAGNEEITLRHLSFREQQ" gene 3328270..3328947 /gene="gspO" /locus_tag="b3335" /gene_synonym="ECK3322" /gene_synonym="hofD" /gene_synonym="hopD" /gene_synonym="hopO" /gene_synonym="JW3297" /gene_synonym="yheC" /db_xref="EcoGene:EG11359" CDS 3328270..3328947 /gene="gspO" /locus_tag="b3335" /gene_synonym="ECK3322" /gene_synonym="hofD" /gene_synonym="hopD" /gene_synonym="hopO" /gene_synonym="JW3297" /gene_synonym="yheC" /EC_number="2.1.1.-" /EC_number="3.4.23.43" /function="enzyme; Degradation of proteins, peptides, glyco" /note="GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="bifunctional prepilin leader peptidase/ methylase" /protein_id="AAC76360.1" /db_xref="GI:1789732" /db_xref="ASAP:ABE-0010901" /db_xref="UniProtKB/Swiss-Prot:P25960" /db_xref="EcoGene:EG11359" /translation="MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHF RQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPD KLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFK LLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLG YLAWISY" gene complement(3328976..3329452) /gene="bfr" /locus_tag="b3336" /gene_synonym="ECK3323" /gene_synonym="JW3298" /db_xref="EcoGene:EG10113" CDS complement(3328976..3329452) /gene="bfr" /locus_tag="b3336" /gene_synonym="ECK3323" /gene_synonym="JW3298" /function="carrier; Transport of small molecules: Cations" /experiment="N-terminus verified by Edman degradation: PMID 2644932" /note="bacterioferrin, an iron storage homoprotein; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="bacterioferritin, iron storage and detoxification protein" /protein_id="AAC76361.1" /db_xref="GI:1789733" /db_xref="ASAP:ABE-0010903" /db_xref="UniProtKB/Swiss-Prot:P0ABD3" /db_xref="EcoGene:EG10113" /translation="MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVE YHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLR EAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG" gene complement(3329524..3329718) /gene="bfd" /locus_tag="b3337" /gene_synonym="ECK3324" /gene_synonym="JW3299" /gene_synonym="yheA" /db_xref="EcoGene:EG11181" CDS complement(3329524..3329718) /gene="bfd" /locus_tag="b3337" /gene_synonym="ECK3324" /gene_synonym="JW3299" /gene_synonym="yheA" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport" /codon_start=1 /transl_table=11 /product="bacterioferritin-associated ferredoxin" /protein_id="AAC76362.1" /db_xref="GI:1789735" /db_xref="ASAP:ABE-0010906" /db_xref="UniProtKB/Swiss-Prot:P0AE56" /db_xref="EcoGene:EG11181" /translation="MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVR AAREVMEDELMQLPEFKESA" gene complement(3329887..3332580) /gene="chiA" /locus_tag="b3338" /gene_synonym="ECK3325" /gene_synonym="JW3300" /gene_synonym="yheB" /db_xref="EcoGene:EG11237" CDS complement(3329887..3332580) /gene="chiA" /locus_tag="b3338" /gene_synonym="ECK3325" /gene_synonym="JW3300" /gene_synonym="yheB" /EC_number="3.2.1.14" /EC_number="3.2.1.17" /function="putative enzyme; Not classified" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0009057 - macromolecule catabolic process" /codon_start=1 /transl_table=11 /product="periplasmic endochitinase" /protein_id="AAC76363.1" /db_xref="GI:1789736" /db_xref="ASAP:ABE-0010909" /db_xref="UniProtKB/Swiss-Prot:P13656" /db_xref="EcoGene:EG11237" /translation="MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGK IYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSNSN TPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNC PGDAKSNDASNPWRYVRAATATEISETSNPQSCTSAPQPSPDVKPAPDVKPAPDVQPA PADKSNDNYAVVAWKGQEGSSTWYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRY VRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTPDNSEPSTPADSVND YSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAE LSQYGNPTTCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGD NPWKKYEPAKAWSASTVYVKGDRVVVDGQAYEALFWTQSDNPALVANQNATGSNSRPW KPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSDSNPWRV FVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKD ANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQH YYDIVDNLNLKVLDFDIEGTWVADQASIERRNLAVKKVQDKWKSEGKDIAIWYTLPIL PTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIAN LHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVG IWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ" gene complement(3332872..3334056) /gene="tufA" /locus_tag="b3339" /gene_synonym="ECK3326" /gene_synonym="JW3301" /gene_synonym="kirT" /gene_synonym="pulT" /db_xref="EcoGene:EG11036" CDS complement(3332872..3334056) /gene="tufA" /locus_tag="b3339" /gene_synonym="ECK3326" /gene_synonym="JW3301" /gene_synonym="kirT" /gene_synonym="pulT" /function="factor; Proteins - translation and modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation; GO_process: GO:0006970 - response to osmotic stress" /codon_start=1 /transl_table=11 /product="translation elongation factor EF-Tu 1" /protein_id="AAC76364.1" /db_xref="GI:1789737" /db_xref="ASAP:ABE-0010912" /db_xref="UniProtKB/Swiss-Prot:P0CE47" /db_xref="EcoGene:EG11036" /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGA ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ YDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDV FSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVG VLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFR TTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKV LG" gene complement(3334127..3336241) /gene="fusA" /locus_tag="b3340" /gene_synonym="ECK3327" /gene_synonym="far" /gene_synonym="fus" /gene_synonym="JW3302" /db_xref="EcoGene:EG10360" CDS complement(3334127..3336241) /gene="fusA" /locus_tag="b3340" /gene_synonym="ECK3327" /gene_synonym="far" /gene_synonym="fus" /gene_synonym="JW3302" /function="factor; Proteins - translation and modification" /note="GTP-binding protein chain elongation factor EF-G; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="protein chain elongation factor EF-G, GTP-binding" /protein_id="AAC76365.1" /db_xref="GI:1789738" /db_xref="ASAP:ABE-0010914" /db_xref="UniProtKB/Swiss-Prot:P0A6M8" /db_xref="EcoGene:EG10360" /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM EFLKYDEAPSNVAQAVIEARGK" gene complement(3336269..3336808) /gene="rpsG" /locus_tag="b3341" /gene_synonym="ECK3328" /gene_synonym="JW3303" /db_xref="EcoGene:EG10906" CDS complement(3336269..3336808) /gene="rpsG" /locus_tag="b3341" /gene_synonym="ECK3328" /gene_synonym="JW3303" /function="structural component; Ribosomal proteins - synthesis, modification" /note="30S ribosomal subunit protein S7, initiates assembly; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S7" /protein_id="AAC76366.1" /db_xref="GI:1789739" /db_xref="ASAP:ABE-0010917" /db_xref="UniProtKB/Swiss-Prot:P02359" /db_xref="EcoGene:EG10906" /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLR SFSHQAGASSKQPALGYLN" gene complement(3336905..3337279) /gene="rpsL" /locus_tag="b3342" /gene_synonym="asuB" /gene_synonym="ECK3329" /gene_synonym="JW3304" /gene_synonym="strA" /db_xref="EcoGene:EG10911" CDS complement(3336905..3337279) /gene="rpsL" /locus_tag="b3342" /gene_synonym="asuB" /gene_synonym="ECK3329" /gene_synonym="JW3304" /gene_synonym="strA" /function="structural component; Ribosomal proteins - synthesis, modification" /note="GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S12" /protein_id="AAC76367.1" /db_xref="GI:1789740" /db_xref="ASAP:ABE-0010919" /db_xref="UniProtKB/Swiss-Prot:P0A7S3" /db_xref="EcoGene:EG10911" /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL DCSGVKDRKQARSKYGVKRPKA" gene complement(3337405..3337692) /gene="tusB" /locus_tag="b3343" /gene_synonym="ECK3330" /gene_synonym="JW3305" /gene_synonym="yheL" /db_xref="EcoGene:EG12896" CDS complement(3337405..3337692) /gene="tusB" /locus_tag="b3343" /gene_synonym="ECK3330" /gene_synonym="JW3305" /gene_synonym="yheL" /codon_start=1 /transl_table=11 /product="mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" /protein_id="AAC76368.1" /db_xref="GI:1789741" /db_xref="ASAP:ABE-0010922" /db_xref="UniProtKB/Swiss-Prot:P45530" /db_xref="EcoGene:EG12896" /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL ESLRNAPIKVYALNEDLIARGLTGQISNDIILIDYTDFVRLTVKHPSQMAW" gene complement(3337700..3338059) /gene="tusC" /locus_tag="b3344" /gene_synonym="ECK3331" /gene_synonym="JW3306" /gene_synonym="yheM" /db_xref="EcoGene:EG12897" CDS complement(3337700..3338059) /gene="tusC" /locus_tag="b3344" /gene_synonym="ECK3331" /gene_synonym="JW3306" /gene_synonym="yheM" /codon_start=1 /transl_table=11 /product="mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" /protein_id="AAC76369.1" /db_xref="GI:1789742" /db_xref="ASAP:ABE-0010928" /db_xref="UniProtKB/Swiss-Prot:P45531" /db_xref="EcoGene:EG12897" /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV FQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE ADALRRELANYDVILRF" gene complement(3338059..3338445) /gene="tusD" /locus_tag="b3345" /gene_synonym="ECK3332" /gene_synonym="JW3307" /gene_synonym="yheN" /db_xref="EcoGene:EG12898" CDS complement(3338059..3338445) /gene="tusD" /locus_tag="b3345" /gene_synonym="ECK3332" /gene_synonym="JW3307" /gene_synonym="yheN" /codon_start=1 /transl_table=11 /product="sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis" /protein_id="AAC76370.1" /db_xref="GI:1789743" /db_xref="ASAP:ABE-0010933" /db_xref="UniProtKB/Swiss-Prot:P45532" /db_xref="EcoGene:EG12898" /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV YNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSN LQQGFTLSGLGALAEASLTCDRVVQF" gene complement(3338445..3339167) /gene="yheO" /locus_tag="b3346" /gene_synonym="ECK3333" /gene_synonym="JW5703" /db_xref="EcoGene:EG12899" CDS complement(3338445..3339167) /gene="yheO" /locus_tag="b3346" /gene_synonym="ECK3333" /gene_synonym="JW5703" /codon_start=1 /transl_table=11 /product="putative PAS domain-containing DNA-binding transcriptional regulator" /protein_id="AAC76371.2" /db_xref="GI:87082246" /db_xref="ASAP:ABE-0010936" /db_xref="UniProtKB/Swiss-Prot:P64624" /db_xref="EcoGene:EG12899" /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI SKHTVYLYIRQFKSGDFQGQDK" gene complement(3339334..3340146) /gene="fkpA" /locus_tag="b3347" /gene_synonym="ECK3334" /gene_synonym="JW3309" /gene_synonym="yzzS" /db_xref="EcoGene:EG12900" CDS complement(3339334..3340146) /gene="fkpA" /locus_tag="b3347" /gene_synonym="ECK3334" /gene_synonym="JW3309" /gene_synonym="yzzS" /EC_number="5.2.1.8" /function="enzyme; Proteins - translation and modification" /note="GO_component: GO:0042597 - periplasmic space; GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" /protein_id="AAC76372.1" /db_xref="GI:1789745" /db_xref="ASAP:ABE-0010938" /db_xref="UniProtKB/Swiss-Prot:P45523" /db_xref="EcoGene:EG12900" /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATAADSKAAFKND DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK" gene 3340367..3340585 /gene="slyX" /locus_tag="b3348" /gene_synonym="ECK3335" /gene_synonym="JW3310" /db_xref="EcoGene:EG11664" CDS 3340367..3340585 /gene="slyX" /locus_tag="b3348" /gene_synonym="ECK3335" /gene_synonym="JW3310" /note="host factor for lysis of phiX174 infection" /codon_start=1 /transl_table=11 /product="phi X174 lysis protein" /protein_id="AAC76373.1" /db_xref="GI:1789747" /db_xref="ASAP:ABE-0010944" /db_xref="UniProtKB/Swiss-Prot:P0A8R4" /db_xref="EcoGene:EG11664" /translation="MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDH LRLLTEKLKASQPSNIASQAEETPPPHY" gene complement(3340634..3341224) /gene="slyD" /locus_tag="b3349" /gene_synonym="ECK3336" /gene_synonym="JW3311" /db_xref="EcoGene:EG11663" CDS complement(3340634..3341224) /gene="slyD" /locus_tag="b3349" /gene_synonym="ECK3336" /gene_synonym="JW3311" /EC_number="5.2.1.8" /function="enzyme; Proteins - translation and modification" /experiment="N-terminus verified by Edman degradation: PMID 8300624,9188461" /note="FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="FKBP-type peptidyl prolyl cis-trans isomerase (rotamase)" /protein_id="AAC76374.1" /db_xref="GI:1789748" /db_xref="ASAP:ABE-0010946" /db_xref="UniProtKB/Swiss-Prot:P0A9K9" /db_xref="EcoGene:EG11663" /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH" gene complement(3341319..3341519) /gene="yheV" /locus_tag="b4551" /gene_synonym="ECK3337" /gene_synonym="JW3312" /db_xref="EcoGene:EG14364" CDS complement(3341319..3341519) /gene="yheV" /locus_tag="b4551" /gene_synonym="ECK3337" /gene_synonym="JW3312" /note="GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="DUF2387 family putative metal-binding protein" /protein_id="ABD18701.1" /db_xref="GI:87082247" /db_xref="ASAP:ABE-0285072" /db_xref="UniProtKB/Swiss-Prot:P0ADW8" /db_xref="EcoGene:EG14364" /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE ADKEARDHVRKDEQVIGIFHPD" gene complement(3341529..3343334) /gene="kefB" /locus_tag="b3350" /gene_synonym="ECK3338" /gene_synonym="JW3313" /gene_synonym="trkB" /db_xref="EcoGene:EG20110" CDS complement(3341529..3343334) /gene="kefB" /locus_tag="b3350" /gene_synonym="ECK3338" /gene_synonym="JW3313" /gene_synonym="trkB" /function="transport; Transport of small molecules: Cations" /note="K+ efflux; NEM-activable K+/H+ antiporter; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015386 - potassium:hydrogen antiporter activity" /codon_start=1 /transl_table=11 /product="potassium:proton antiporter" /protein_id="AAC76375.1" /db_xref="GI:1789749" /db_xref="ASAP:ABE-0010949" /db_xref="UniProtKB/Swiss-Prot:P45522" /db_xref="EcoGene:EG20110" /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV IPALALVPLLAGSADEHFDWMKVGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG EFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDE KPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGD ATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELL QAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADT VQISRAREARRELEEIFQREMQQERRQLDGWDEFE" gene complement(3343334..3343888) /gene="kefG" /locus_tag="b3351" /gene_synonym="ECK3339" /gene_synonym="JW3314" /gene_synonym="yheR" /db_xref="EcoGene:EG12902" CDS complement(3343334..3343888) /gene="kefG" /locus_tag="b3351" /gene_synonym="ECK3339" /gene_synonym="JW3314" /gene_synonym="yheR" /function="putative enzyme; Not classified" /note="putative NAD(P)H oxidoreductase" /codon_start=1 /transl_table=11 /product="potassium-efflux system ancillary protein for KefB, glutathione-regulated" /protein_id="AAC76376.1" /db_xref="GI:1789750" /db_xref="ASAP:ABE-0010951" /db_xref="UniProtKB/Swiss-Prot:P0A756" /db_xref="EcoGene:EG12902" /translation="MMSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAH YPDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLA GKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQS AQELASHARAYGDWLANPLSPGGR" gene 3344016..3345929 /gene="yheS" /locus_tag="b3352" /gene_synonym="ECK3340" /gene_synonym="JW3315" /db_xref="EcoGene:EG12903" CDS 3344016..3345929 /gene="yheS" /locus_tag="b3352" /gene_synonym="ECK3340" /gene_synonym="JW3315" /function="putative transport; Not classified" /note="putative ATP-binding component of a transport system; GO_component: GO:0005737 - cytoplasm" /codon_start=1 /transl_table=11 /product="ABC-F family protein predicted regulatory ATPase" /protein_id="AAC76377.1" /db_xref="GI:1789751" /db_xref="ASAP:ABE-0010955" /db_xref="UniProtKB/Swiss-Prot:P63389" /db_xref="EcoGene:EG12903" /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL ALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDAN ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ EQLEQMLLEGQSN" gene 3345929..3346951 /gene="yheT" /locus_tag="b3353" /gene_synonym="ECK3341" /gene_synonym="JW3316" /db_xref="EcoGene:EG12904" CDS 3345929..3346951 /gene="yheT" /locus_tag="b3353" /gene_synonym="ECK3341" /gene_synonym="JW3316" /codon_start=1 /transl_table=11 /product="UPF0017 family putative hydrolase" /protein_id="AAC76378.1" /db_xref="GI:1789752" /db_xref="ASAP:ABE-0010957" /db_xref="UniProtKB/Swiss-Prot:P45524" /db_xref="EcoGene:EG12904" /translation="MAQITTTDANEFSSSAEFIPMRGFSNCHLQTMLPRLFRRQVKFT PYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGW LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH AKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY LEAKSC" gene 3346945..3347163 /gene="yheU" /locus_tag="b3354" /gene_synonym="ECK3342" /gene_synonym="JW3317" /db_xref="EcoGene:EG12905" CDS 3346945..3347163 /gene="yheU" /locus_tag="b3354" /gene_synonym="ECK3342" /gene_synonym="JW3317" /codon_start=1 /transl_table=11 /product="UPF0270 family protein" /protein_id="AAC76379.1" /db_xref="GI:1789753" /db_xref="ASAP:ABE-0010959" /db_xref="UniProtKB/Swiss-Prot:P67624" /db_xref="EcoGene:EG12905" /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR QLQCGEAVLVWSELHETVNIMPRSQFRE" gene 3347217..3348086 /gene="prkB" /locus_tag="b3355" /gene_synonym="ECK3343" /gene_synonym="JW3318" /gene_synonym="prk?" /gene_synonym="yhfF" /db_xref="EcoGene:EG12365" CDS 3347217..3348086 /gene="prkB" /locus_tag="b3355" /gene_synonym="ECK3343" /gene_synonym="JW3318" /gene_synonym="prk?" /gene_synonym="yhfF" /function="putative enzyme; Central intermediary metabolism: Miscellaneous glucose metabolism" /note="probable phosphoribulokinase; GO_process: GO:0006006 - glucose metabolic process" /codon_start=1 /transl_table=11 /product="putative phosphoribulokinase" /protein_id="AAC76380.1" /db_xref="GI:2367214" /db_xref="ASAP:ABE-0010962" /db_xref="UniProtKB/Swiss-Prot:P0AEX5" /db_xref="EcoGene:EG12365" /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML PLVQRLMEGKKIE" repeat_region 3348099..3348120 /note="REP246 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3348141..3348545) /gene="yhfA" /locus_tag="b3356" /gene_synonym="ECK3344" /gene_synonym="JW3319" /db_xref="EcoGene:EG11182" CDS complement(3348141..3348545) /gene="yhfA" /locus_tag="b3356" /gene_synonym="ECK3344" /gene_synonym="JW3319" /codon_start=1 /transl_table=11 /product="OsmC family protein" /protein_id="AAC76381.1" /db_xref="GI:1789755" /db_xref="ASAP:ABE-0010964" /db_xref="UniProtKB/Swiss-Prot:P0ADX1" /db_xref="EcoGene:EG11182" /translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA" gene 3348847..3349479 /gene="crp" /locus_tag="b3357" /gene_synonym="cap" /gene_synonym="csm" /gene_synonym="ECK3345" /gene_synonym="JW5702" /db_xref="EcoGene:EG10164" CDS 3348847..3349479 /gene="crp" /locus_tag="b3357" /gene_synonym="cap" /gene_synonym="csm" /gene_synonym="ECK3345" /gene_synonym="JW5702" /function="regulator; Global regulatory functions" /note="cyclic AMP receptor protein; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="cAMP-activated global transcription factor, mediator of catabolite repression" /protein_id="AAC76382.1" /db_xref="GI:1789756" /db_xref="ASAP:ABE-0010970" /db_xref="UniProtKB/Swiss-Prot:P0ACJ8" /db_xref="EcoGene:EG10164" /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR" gene 3349518..3351620 /gene="yhfK" /locus_tag="b3358" /gene_synonym="ECK3346" /gene_synonym="JW5701" /db_xref="EcoGene:EG12906" CDS 3349518..3351620 /gene="yhfK" /locus_tag="b3358" /gene_synonym="ECK3346" /gene_synonym="JW5701" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0008152 - metabolic process" /codon_start=1 /transl_table=11 /product="putative transporter, FUSC superfamily inner membrane protein" /protein_id="AAC76383.2" /db_xref="GI:87082248" /db_xref="ASAP:ABE-0010974" /db_xref="UniProtKB/Swiss-Prot:P45537" /db_xref="EcoGene:EG12906" /translation="MFPPMWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLF SLVPACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVL GVTAELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIW REQPLRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQM HMLSAQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTV AARLRVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRT QKPLYARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPK SYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITT LASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWL WPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQA MQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQ RCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWR QRPHHGIWLSRKLRDSKA" repeat_region 3351630..3351685 /note="REP247 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3351687..3352907) /gene="argD" /locus_tag="b3359" /gene_synonym="alaB" /gene_synonym="Arg1" /gene_synonym="argG" /gene_synonym="dapC" /gene_synonym="dtu" /gene_synonym="ECK3347" /gene_synonym="JW3322" /db_xref="EcoGene:EG10066" CDS complement(3351687..3352907) /gene="argD" /locus_tag="b3359" /gene_synonym="alaB" /gene_synonym="Arg1" /gene_synonym="argG" /gene_synonym="dapC" /gene_synonym="dtu" /gene_synonym="ECK3347" /gene_synonym="JW3322" /EC_number="2.6.1.11" /EC_number="2.6.1.17" /function="enzyme; Amino acid biosynthesis: Arginine" /note="acetylornithine delta-aminotransferase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006526 - arginine biosynthetic process; GO_process: GO:0009089 - lysine biosynthetic process via diaminopimelate" /codon_start=1 /transl_table=11 /product="bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase" /protein_id="AAC76384.1" /db_xref="GI:1789759" /db_xref="ASAP:ABE-0010976" /db_xref="UniProtKB/Swiss-Prot:P18335" /db_xref="EcoGene:EG10066" /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQ HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAF HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD IRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEG MQRFAHAVAKVVGA" gene complement(3352993..3353556) /gene="pabA" /locus_tag="b3360" /gene_synonym="ECK3348" /gene_synonym="JW3323" /db_xref="EcoGene:EG10682" CDS complement(3352993..3353556) /gene="pabA" /locus_tag="b3360" /gene_synonym="ECK3348" /gene_synonym="JW3323" /EC_number="2.6.1.85" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="p-aminobenzoate synthetase, component II; GO_process: GO:0046656 - folic acid biosynthetic process" /codon_start=1 /transl_table=11 /product="aminodeoxychorismate synthase, subunit II" /protein_id="AAC76385.1" /db_xref="GI:1789760" /db_xref="ASAP:ABE-0010983" /db_xref="UniProtKB/Swiss-Prot:P00903" /db_xref="EcoGene:EG10682" /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQW DLEGVQFHPESILSEQGHQLLANFLHR" gene complement(3353588..3354190) /gene="fic" /locus_tag="b3361" /gene_synonym="ECK3349" /gene_synonym="JW3324" /gene_synonym="vhpT" /db_xref="EcoGene:EG10307" CDS complement(3353588..3354190) /gene="fic" /locus_tag="b3361" /gene_synonym="ECK3349" /gene_synonym="JW3324" /gene_synonym="vhpT" /note="induced in stationary phase, recognized by rpoS, affects cell division" /codon_start=1 /transl_table=11 /product="stationary phase-induced protein, putative toxin" /protein_id="AAC76386.1" /db_xref="GI:1789761" /db_xref="ASAP:ABE-0010987" /db_xref="UniProtKB/Swiss-Prot:P20605" /db_xref="EcoGene:EG10307" /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL MQDLEEEGYLVGLEKAKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE" gene complement(3354180..3354347) /gene="yhfG" /locus_tag="b3362" /gene_synonym="ECK3350" /gene_synonym="JW3325" /gene_synonym="vhpA" /db_xref="EcoGene:EG12374" CDS complement(3354180..3354347) /gene="yhfG" /locus_tag="b3362" /gene_synonym="ECK3350" /gene_synonym="JW3325" /gene_synonym="vhpA" /codon_start=1 /transl_table=11 /product="putative antitoxin for Fic" /protein_id="AAC76387.1" /db_xref="GI:1789762" /db_xref="ASAP:ABE-0010989" /db_xref="UniProtKB/Swiss-Prot:P0ADX5" /db_xref="EcoGene:EG12374" /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA RLEELRSHYER" gene complement(3354452..3355024) /gene="ppiA" /locus_tag="b3363" /gene_synonym="ECK3351" /gene_synonym="JW3326" /gene_synonym="rot" /gene_synonym="rotA" /db_xref="EcoGene:EG10757" CDS complement(3354452..3355024) /gene="ppiA" /locus_tag="b3363" /gene_synonym="ECK3351" /gene_synonym="JW3326" /gene_synonym="rot" /gene_synonym="rotA" /EC_number="5.2.1.8" /function="enzyme; Proteins - translation and modification" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase A (rotamase A)" /protein_id="AAC76388.1" /db_xref="GI:1789763" /db_xref="ASAP:ABE-0010992" /db_xref="UniProtKB/Swiss-Prot:P0AFL3" /db_xref="EcoGene:EG10757" /translation="MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELEL DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD KISQVPTHDVGPYQNVPSKPVVILSAKVLP" gene 3355295..3356476 /gene="tsgA" /locus_tag="b3364" /gene_synonym="ECK3352" /gene_synonym="gutS" /gene_synonym="JW3327" /gene_synonym="yhfC" /gene_synonym="yhfH" /db_xref="EcoGene:EG11262" CDS 3355295..3356476 /gene="tsgA" /locus_tag="b3364" /gene_synonym="ECK3352" /gene_synonym="gutS" /gene_synonym="JW3327" /gene_synonym="yhfC" /gene_synonym="yhfH" /function="putative transport; Not classified" /note="putative transport; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC76389.1" /db_xref="GI:1789764" /db_xref="ASAP:ABE-0010997" /db_xref="UniProtKB/Swiss-Prot:P60778" /db_xref="EcoGene:EG11262" /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAA MFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS H" repeat_region 3356485..3356510 /note="REP248 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene 3356738..3359281 /gene="nirB" /locus_tag="b3365" /gene_synonym="ECK3353" /gene_synonym="JW3328" /db_xref="EcoGene:EG10653" CDS 3356738..3359281 /gene="nirB" /locus_tag="b3365" /gene_synonym="ECK3353" /gene_synonym="JW3328" /EC_number="1.7.1.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="nitrite reductase (NAD(P)H) subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrite reductase, large subunit, NAD(P)H-binding" /protein_id="AAC76390.1" /db_xref="GI:1789765" /db_xref="ASAP:ABE-0011003" /db_xref="UniProtKB/Swiss-Prot:P08201" /db_xref="EcoGene:EG10653" /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETV NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA" gene 3359278..3359604 /gene="nirD" /locus_tag="b3366" /gene_synonym="ECK3354" /gene_synonym="JW3329" /db_xref="EcoGene:EG10655" CDS 3359278..3359604 /gene="nirD" /locus_tag="b3366" /gene_synonym="ECK3354" /gene_synonym="JW3329" /EC_number="1.7.1.4" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="nitrite reductase (NAD(P)H) subunit; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009061 - anaerobic respiration" /codon_start=1 /transl_table=11 /product="nitrite reductase (NADH) small subunit" /protein_id="AAC76391.1" /db_xref="GI:1789766" /db_xref="ASAP:ABE-0011005" /db_xref="UniProtKB/Swiss-Prot:P0A9I8" /db_xref="EcoGene:EG10655" /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG VVQLRG" gene 3359730..3360536 /gene="nirC" /locus_tag="b3367" /gene_synonym="ECK3355" /gene_synonym="JW3330" /db_xref="EcoGene:EG10654" CDS 3359730..3360536 /gene="nirC" /locus_tag="b3367" /gene_synonym="ECK3355" /gene_synonym="JW3330" /function="enzyme; Energy metabolism, carbon: Anaerobic respiration" /note="nitrite reductase activity; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006807 - nitrogen compound metabolic process" /codon_start=1 /transl_table=11 /product="nitrite transporter" /protein_id="AAC76392.2" /db_xref="GI:87082249" /db_xref="ASAP:ABE-0011008" /db_xref="UniProtKB/Swiss-Prot:P0AC26" /db_xref="EcoGene:EG10654" /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG" gene 3360555..3361928 /gene="cysG" /locus_tag="b3368" /gene_synonym="ECK3356" /gene_synonym="JW3331" /db_xref="EcoGene:EG10188" CDS 3360555..3361928 /gene="cysG" /locus_tag="b3368" /gene_synonym="ECK3356" /gene_synonym="JW3331" /EC_number="1.3.1.76" /EC_number="2.1.1.107" /EC_number="4.99.1.4" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /experiment="N-terminus verified by Edman degradation: PMID 2407558" /note="uroporphyrinogen III methylase; sirohaeme biosynthesis" /codon_start=1 /transl_table=11 /product="fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase" /protein_id="AAC76393.1" /db_xref="GI:1789768" /db_xref="ASAP:ABE-0011010" /db_xref="UniProtKB/Swiss-Prot:P0AEA8" /db_xref="EcoGene:EG10188" /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNV VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ LRGRVKQQFATMGERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK LNWFSNH" gene 3362175..3362342 /gene="yhfL" /locus_tag="b3369" /gene_synonym="ECK3357" /gene_synonym="JW3332" /db_xref="EcoGene:EG12907" CDS 3362175..3362342 /gene="yhfL" /locus_tag="b3369" /gene_synonym="ECK3357" /gene_synonym="JW3332" /codon_start=1 /transl_table=11 /product="small lipoprotein" /protein_id="AAC76394.1" /db_xref="GI:1789770" /db_xref="ASAP:ABE-0011016" /db_xref="UniProtKB/Swiss-Prot:P64627" /db_xref="EcoGene:EG12907" /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS KIIGGCGPTAQ" gene 3362637..3363974 /gene="frlA" /locus_tag="b3370" /gene_synonym="ECK3358" /gene_synonym="JW3333" /gene_synonym="yhfM" /db_xref="EcoGene:EG12908" CDS 3362637..3363974 /gene="frlA" /locus_tag="b3370" /gene_synonym="ECK3358" /gene_synonym="JW3333" /gene_synonym="yhfM" /function="putative transport; Not classified" /note="putative amino acid/amine transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="putative fructoselysine transporter" /protein_id="AAC76395.2" /db_xref="GI:87082250" /db_xref="ASAP:ABE-0011019" /db_xref="UniProtKB/Swiss-Prot:P45539" /db_xref="EcoGene:EG12908" /translation="MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWL TVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDA PSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAK IIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMT GEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAL GSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSI ILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGL MTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS" gene 3363995..3365017 /gene="frlB" /locus_tag="b3371" /gene_synonym="ECK3359" /gene_synonym="JW5700" /gene_synonym="yhfN" /db_xref="EcoGene:EG12909" CDS 3363995..3365017 /gene="frlB" /locus_tag="b3371" /gene_synonym="ECK3359" /gene_synonym="JW5700" /gene_synonym="yhfN" /function="putative transport; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="fructoselysine-6-P-deglycase" /protein_id="AAC76396.2" /db_xref="GI:87082251" /db_xref="ASAP:ABE-0011021" /db_xref="UniProtKB/Swiss-Prot:P0AC00" /db_xref="EcoGene:EG12909" /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI DRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY GGLVEY" gene 3365067..3365897 /gene="frlC" /locus_tag="b4474" /gene_synonym="ECK3360" /gene_synonym="JW5699" /gene_synonym="yhfO" /gene_synonym="yhfP" /db_xref="EcoGene:EG12910" CDS 3365067..3365897 /gene="frlC" /locus_tag="b4474" /gene_synonym="ECK3360" /gene_synonym="JW5699" /gene_synonym="yhfO" /gene_synonym="yhfP" /note="putative fructoselysine or fructoselysine 6-P isomerase" /codon_start=1 /transl_table=11 /product="fructoselysine 3-epimerase" /protein_id="AAT48177.1" /db_xref="GI:48994933" /db_xref="ASAP:ABE-0174114" /db_xref="UniProtKB/Swiss-Prot:P45541" /db_xref="EcoGene:EG12910" /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM NAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER " gene 3365894..3366679 /gene="frlD" /locus_tag="b3374" /gene_synonym="ECK3361" /gene_synonym="JW3337" /gene_synonym="yhfQ" /db_xref="EcoGene:EG12912" CDS 3365894..3366679 /gene="frlD" /locus_tag="b3374" /gene_synonym="ECK3361" /gene_synonym="JW3337" /gene_synonym="yhfQ" /EC_number="2.7.1.-" /function="putative enzyme; Not classified" /note="putative kinase" /codon_start=1 /transl_table=11 /product="fructoselysine 6-kinase" /protein_id="AAC76399.1" /db_xref="GI:1789775" /db_xref="ASAP:ABE-0011029" /db_xref="UniProtKB/Swiss-Prot:P45543" /db_xref="EcoGene:EG12912" /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID TMGAGDSFIAGFLCGWSAGMTLPQAIAQGTACAAKTIQYHGAW" gene 3366779..3367510 /gene="frlR" /locus_tag="b3375" /gene_synonym="ECK3362" /gene_synonym="JW5698" /gene_synonym="yhfR" /db_xref="EcoGene:EG12913" CDS 3366779..3367510 /gene="frlR" /locus_tag="b3375" /gene_synonym="ECK3362" /gene_synonym="JW5698" /gene_synonym="yhfR" /function="putative regulator; Not classified" /note="putative transcriptional regulator; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAC76400.2" /db_xref="GI:87082252" /db_xref="ASAP:ABE-0011031" /db_xref="UniProtKB/Swiss-Prot:P45544" /db_xref="EcoGene:EG12913" /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK EKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN DKPVHVSELFCRANRITLTIDNKRH" repeat_region 3367513..3367548 /note="REP249 (repetitive extragenic palindromic) element; contains 1 REP sequences" gene complement(3367662..3368747) /gene="yhfS" /locus_tag="b3376" /gene_synonym="ECK3363" /gene_synonym="JW3339" /db_xref="EcoGene:EG12914" CDS complement(3367662..3368747) /gene="yhfS" /locus_tag="b3376" /gene_synonym="ECK3363" /gene_synonym="JW3339" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein" /protein_id="AAC76401.1" /db_xref="GI:1789777" /db_xref="ASAP:ABE-0011035" /db_xref="UniProtKB/Swiss-Prot:P45545" /db_xref="EcoGene:EG12914" /translation="MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTP GLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA TLYSGGSQIQGAQALEVLRGLVFAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANA QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE HCAIRINPNRSGEETVLRILRESIASI" gene complement(3368759..3370063) /gene="yhfT" /locus_tag="b3377" /gene_synonym="ECK3364" /gene_synonym="JW3340" /db_xref="EcoGene:EG12915" CDS complement(3368759..3370063) /gene="yhfT" /locus_tag="b3377" /gene_synonym="ECK3364" /gene_synonym="JW3340" /function="putative transport; Not classified" /note="putative transport system permease protein" /codon_start=1 /transl_table=11 /product="inner membrane protein" /protein_id="AAC76402.1" /db_xref="GI:2367218" /db_xref="ASAP:ABE-0011037" /db_xref="UniProtKB/Swiss-Prot:P45546" /db_xref="EcoGene:EG12915" /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLI AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISA EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA" gene complement(3370075..3370428) /gene="yhfU" /locus_tag="b3378" /gene_synonym="ECK3365" /gene_synonym="JW5697" /db_xref="EcoGene:EG12916" CDS complement(3370075..3370428) /gene="yhfU" /locus_tag="b3378" /gene_synonym="ECK3365" /gene_synonym="JW5697" /codon_start=1 /transl_table=11 /product="DUF2620 family protein" /protein_id="AAC76403.2" /db_xref="GI:87082253" /db_xref="ASAP:ABE-0011041" /db_xref="UniProtKB/Swiss-Prot:P64631" /db_xref="EcoGene:EG12916" /translation="MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQ LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV EHVEHAIPMLINHLK" gene complement(3370439..3371317) /gene="php" /locus_tag="b3379" /gene_synonym="ECK3366" /gene_synonym="JW3342" /gene_synonym="yhfV" /db_xref="EcoGene:EG12917" CDS complement(3370439..3371317) /gene="php" /locus_tag="b3379" /gene_synonym="ECK3366" /gene_synonym="JW3342" /gene_synonym="yhfV" /function="putative enzyme; Not classified" /experiment="N-terminus verified by Edman degradation: PMID 9692977" /note="putative hydrolase" /codon_start=1 /transl_table=11 /product="phosphotriesterase homology protein" /protein_id="AAC76404.1" /db_xref="GI:1789780" /db_xref="ASAP:ABE-0011044" /db_xref="UniProtKB/Swiss-Prot:P45548" /db_xref="EcoGene:EG12917" /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM TRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELA QEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTS FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ ADVDVMLRENPSQFFQ" gene complement(3371314..3372540) /gene="yhfW" /locus_tag="b3380" /gene_synonym="ECK3367" /gene_synonym="JW3343" /db_xref="EcoGene:EG12918" CDS complement(3371314..3372540) /gene="yhfW" /locus_tag="b3380" /gene_synonym="ECK3367" /gene_synonym="JW3343" /function="putative enzyme; Not classified" /note="putative mutase" /codon_start=1 /transl_table=11 /product="phosphopentomutase-related metalloenzyme superfamily protein" /protein_id="AAC76405.1" /db_xref="GI:1789781" /db_xref="ASAP:ABE-0011046" /db_xref="UniProtKB/Swiss-Prot:P45549" /db_xref="EcoGene:EG12918" /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ LPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM PFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSV ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD NGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMD ITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLV VMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQ NGRSFLSSLRFAGDTL" gene complement(3372540..3373703) /gene="yhfX" /locus_tag="b3381" /gene_synonym="ECK3368" /gene_synonym="JW3344" /db_xref="EcoGene:EG12919" CDS complement(3372540..3373703) /gene="yhfX" /locus_tag="b3381" /gene_synonym="ECK3368" /gene_synonym="JW3344" /codon_start=1 /transl_table=11 /product="putative pyridoxal 5'-phosphate binding protein" /protein_id="AAC76406.1" /db_xref="GI:1789782" /db_xref="ASAP:ABE-0011048" /db_xref="UniProtKB/Swiss-Prot:P45550" /db_xref="EcoGene:EG12919" /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKR LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQ GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLY PGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQAR DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIA MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL PLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA" gene complement(3373787..3374149) /gene="yhfY" /locus_tag="b3382" /gene_synonym="ECK3369" /gene_synonym="JW5696" /db_xref="EcoGene:EG12920" CDS complement(3373787..3374149) /gene="yhfY" /locus_tag="b3382" /gene_synonym="ECK3369" /gene_synonym="JW5696" /codon_start=1 /transl_table=11 /product="PRD domain protein" /protein_id="AAC76407.2" /db_xref="GI:87082254" /db_xref="ASAP:ABE-0011050" /db_xref="UniProtKB/Swiss-Prot:P45551" /db_xref="EcoGene:EG12920" /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE GYLLANLYGLWMAANEEV" gene complement(3374166..3375071) /gene="yhfZ" /locus_tag="b3383" /gene_synonym="ECK3370" /gene_synonym="JW5948" /db_xref="EcoGene:EG12921" CDS complement(3374166..3375071) /gene="yhfZ" /locus_tag="b3383" /gene_synonym="ECK3370" /gene_synonym="JW5948" /codon_start=1 /transl_table=11 /product="putative DNA-binding transcriptional regulator" /protein_id="AAT48178.1" /db_xref="GI:48994934" /db_xref="ASAP:ABE-0011052" /db_xref="UniProtKB/Swiss-Prot:P45552" /db_xref="EcoGene:EG12921" /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELANECRSSVG LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLTHVDINNVVCAMPLPYTRLYEG LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALE LGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESL QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL RAVVDKHALLAHQQRVVSGEQEPSY" repeat_region 3375238..3375327 /note="REP250 (repetitive extragenic palindromic) element; contains 2 REP sequences" gene complement(3375361..3376365) /gene="trpS" /locus_tag="b3384" /gene_synonym="ECK3371" /gene_synonym="JW3347" /db_xref="EcoGene:EG11030" CDS complement(3375361..3376365) /gene="trpS" /locus_tag="b3384" /gene_synonym="ECK3371" /gene_synonym="JW3347" /EC_number="6.1.1.2" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="tryptophan tRNA synthetase; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006418 - tRNA aminoacylation for protein translation" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase" /protein_id="AAC76409.1" /db_xref="GI:1789786" /db_xref="ASAP:ABE-0011056" /db_xref="UniProtKB/Swiss-Prot:P00954" /db_xref="EcoGene:EG11030" /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP " gene complement(3376358..3377116) /gene="gph" /locus_tag="b3385" /gene_synonym="ECK3372" /gene_synonym="JW3348" /gene_synonym="yhfE" /db_xref="EcoGene:EG11871" CDS complement(3376358..3377116) /gene="gph" /locus_tag="b3385" /gene_synonym="ECK3372" /gene_synonym="JW3348" /gene_synonym="yhfE" /EC_number="3.1.3.18" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="GO_process: GO:0016052 - carbohydrate catabolic process" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="AAC76410.1" /db_xref="GI:1789787" /db_xref="ASAP:ABE-0011058" /db_xref="UniProtKB/Swiss-Prot:P32662" /db_xref="EcoGene:EG11871" /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE RVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYY GEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE AIDLSQPDVIYQSINDLLPALGLPHSENQESKND" gene complement(3377109..3377786) /gene="rpe" /locus_tag="b3386" /gene_synonym="dod" /gene_synonym="ECK3373" /gene_synonym="JW3349" /gene_synonym="yhfD" /db_xref="EcoGene:EG11960" CDS complement(3377109..3377786) /gene="rpe" /locus_tag="b3386" /gene_synonym="dod" /gene_synonym="ECK3373" /gene_synonym="JW3349" /gene_synonym="yhfD" /EC_number="5.1.3.1" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch" /codon_start=1 /transl_table=11 /product="D-ribulose-5-phosphate 3-epimerase" /protein_id="AAC76411.1" /db_xref="GI:1789788" /db_xref="ASAP:ABE-0011061" /db_xref="UniProtKB/Swiss-Prot:P0AG07" /db_xref="EcoGene:EG11960" /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE LAKVSHE" gene complement(3377804..3378640) /gene="dam" /locus_tag="b3387" /gene_synonym="ECK3374" /gene_synonym="JW3350" /db_xref="EcoGene:EG10204" CDS complement(3377804..3378640) /gene="dam" /locus_tag="b3387" /gene_synonym="ECK3374" /gene_synonym="JW3350" /EC_number="2.1.1.72" /function="enzyme; DNA - replication, repair, restriction/modification" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006306 - DNA methylation" /codon_start=1 /transl_table=11 /product="DNA adenine methyltransferase" /protein_id="AAC76412.1" /db_xref="GI:1789789" /db_xref="ASAP:ABE-0011063" /db_xref="UniProtKB/Swiss-Prot:P0AEE8" /db_xref="EcoGene:EG10204" /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA KK" gene complement(3378747..3380033) /gene="damX" /locus_tag="b3388" /gene_synonym="ECK3375" /gene_synonym="JW3351" /gene_synonym="yhfB" /db_xref="EcoGene:EG11183" CDS complement(3378747..3380033) /gene="damX" /locus_tag="b3388" /gene_synonym="ECK3375" /gene_synonym="JW3351" /gene_synonym="yhfB" /function="putative membrane; Cell division" /note="putative membrane protein; interferes with cell division; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane" /codon_start=1 /transl_table=11 /product="cell division protein that binds to the septal ring" /protein_id="AAC76413.1" /db_xref="GI:1789790" /db_xref="ASAP:ABE-0011065" /db_xref="UniProtKB/Swiss-Prot:P11557" /db_xref="EcoGene:EG11183" /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ YMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPG TTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVA VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEP KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTA GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK" gene complement(3380125..3381213) /gene="aroB" /locus_tag="b3389" /gene_synonym="ECK3376" /gene_synonym="JW3352" /db_xref="EcoGene:EG10074" CDS complement(3380125..3381213) /gene="aroB" /locus_tag="b3389" /gene_synonym="ECK3376" /gene_synonym="JW3352" /EC_number="4.2.3.4" /function="enzyme; Amino acid biosynthesis: Chorismate" /experiment="N-terminus verified by Edman degradation: PMID 3009224" /note="GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="AAC76414.1" /db_xref="GI:1789791" /db_xref="ASAP:ABE-0011067" /db_xref="UniProtKB/Swiss-Prot:P07639" /db_xref="EcoGene:EG10074" /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLIL PLAIGKSEVRSGVSHELVLNAIADCQSA" gene complement(3381270..3381791) /gene="aroK" /locus_tag="b3390" /gene_synonym="ECK3377" /gene_synonym="JW5947" /db_xref="EcoGene:EG10081" CDS complement(3381270..3381791) /gene="aroK" /locus_tag="b3390" /gene_synonym="ECK3377" /gene_synonym="JW5947" /EC_number="2.7.1.71" /function="enzyme; Amino acid biosynthesis: Chorismate" /note="GO_process: GO:0009423 - chorismate biosynthetic process" /codon_start=1 /transl_table=11 /product="shikimate kinase I" /protein_id="AAC76415.2" /db_xref="GI:87082255" /db_xref="ASAP:ABE-0011069" /db_xref="UniProtKB/Swiss-Prot:P0A6D7" /db_xref="EcoGene:EG10081" /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK VVANQIIHMLESN" gene complement(3382192..3383430) /gene="hofQ" /locus_tag="b3391" /gene_synonym="ECK3378" /gene_synonym="hopQ" /gene_synonym="JW3354" /db_xref="EcoGene:EG12113" CDS complement(3382192..3383430) /gene="hofQ" /locus_tag="b3391" /gene_synonym="ECK3378" /gene_synonym="hopQ" /gene_synonym="JW3354" /function="putative transport; Not classified" /note="putative transport portein" /codon_start=1 /transl_table=11 /product="DNA catabolic putative fimbrial transporter" /protein_id="AAC76416.1" /db_xref="GI:1789793" /db_xref="ASAP:ABE-0011071" /db_xref="UniProtKB/Swiss-Prot:P34749" /db_xref="EcoGene:EG12113" /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG KEDERRELVVFITPRLVSSE" gene complement(3383342..3383746) /gene="hofP" /locus_tag="b3392" /gene_synonym="ECK3379" /gene_synonym="JW5694" /gene_synonym="yrfA" /db_xref="EcoGene:EG12922" CDS complement(3383342..3383746) /gene="hofP" /locus_tag="b3392" /gene_synonym="ECK3379" /gene_synonym="JW5694" /gene_synonym="yrfA" /codon_start=1 /transl_table=11 /product="DNA catabolic protein" /protein_id="AAC76417.2" /db_xref="GI:87082256" /db_xref="ASAP:ABE-0011073" /db_xref="UniProtKB/Swiss-Prot:P45750" /db_xref="EcoGene:EG12922" /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG" gene complement(3383736..3384176) /gene="hofO" /locus_tag="b3393" /gene_synonym="ECK3380" /gene_synonym="JW3356" /gene_synonym="yrfB" /db_xref="EcoGene:EG12923" CDS complement(3383736..3384176) /gene="hofO" /locus_tag="b3393" /gene_synonym="ECK3380" /gene_synonym="JW3356" /gene_synonym="yrfB" /codon_start=1 /transl_table=11 /product="DNA catabolic protein" /protein_id="AAC76418.1" /db_xref="GI:1789795" /db_xref="ASAP:ABE-0011075" /db_xref="UniProtKB/Swiss-Prot:P45751" /db_xref="EcoGene:EG12923" /translation="MNMFFDWWFATSPRLRQLCWAFWLLMLVTLIFLSSTHHEERDAL IRLRASHHQQWAALYRLVDTAPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALK TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG" gene complement(3384160..3384699) /gene="hofN" /locus_tag="b3394" /gene_synonym="ECK3381" /gene_synonym="JW3357" /gene_synonym="yrfC" /db_xref="EcoGene:EG12924" CDS complement(3384160..3384699) /gene="hofN" /locus_tag="b3394" /gene_synonym="ECK3381" /gene_synonym="JW3357" /gene_synonym="yrfC" /codon_start=1 /transl_table=11 /product="DNA catabolic putative fimbrial assembly protein" /protein_id="AAC76419.1" /db_xref="GI:1789796" /db_xref="ASAP:ABE-0011077" /db_xref="UniProtKB/Swiss-Prot:P64634" /db_xref="EcoGene:EG12924" /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ GRWQFEYQLTRKVSDEHVL" gene complement(3384699..3385478) /gene="hofM" /locus_tag="b3395" /gene_synonym="ECK3382" /gene_synonym="JW5693" /gene_synonym="yrfD" /db_xref="EcoGene:EG12925" CDS complement(3384699..3385478) /gene="hofM" /locus_tag="b3395" /gene_synonym="ECK3382" /gene_synonym="JW5693" /gene_synonym="yrfD" /codon_start=1 /transl_table=11 /product="DNA catabolic putative pilus assembly protein" /protein_id="AAC76420.2" /db_xref="GI:87082257" /db_xref="ASAP:ABE-0011079" /db_xref="UniProtKB/Swiss-Prot:P45753" /db_xref="EcoGene:EG12925" /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPES VAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY" gene 3385598..3388150 /gene="mrcA" /locus_tag="b3396" /gene_synonym="ECK3383" /gene_synonym="JW3359" /gene_synonym="ponA" /db_xref="EcoGene:EG10748" CDS 3385598..3388150 /gene="mrcA" /locus_tag="b3396" /gene_synonym="ECK3383" /gene_synonym="JW3359" /gene_synonym="ponA" /EC_number="2.4.2.-" /EC_number="3.4.-.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="peptidoglycan synthetase; penicillin-binding protein 1A; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0009252 - peptidoglycan biosynthetic process; GO_process: GO:0042493 - response to drug" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1a, murein transglycosylase and transpeptidase" /protein_id="AAC76421.2" /db_xref="GI:87082258" /db_xref="ASAP:ABE-0011082" /db_xref="UniProtKB/Swiss-Prot:P02918" /db_xref="EcoGene:EG10748" /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN KITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQG PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDASAGSDWQPKNSP PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF" repeat_region 3388205..3388302 /note="RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site" gene complement(3388316..3388876) /gene="nudE" /locus_tag="b3397" /gene_synonym="ECK3384" /gene_synonym="JW3360" /gene_synonym="yrfE" /db_xref="EcoGene:EG12926" CDS complement(3388316..3388876) /gene="nudE" /locus_tag="b3397" /gene_synonym="ECK3384" /gene_synonym="JW3360" /gene_synonym="yrfE" /EC_number="3.6.1.-" /codon_start=1 /transl_table=11 /product="adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase" /protein_id="AAC76422.1" /db_xref="GI:1789800" /db_xref="ASAP:ABE-0011086" /db_xref="UniProtKB/Swiss-Prot:P45799" /db_xref="EcoGene:EG12926" /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE DPDFNEARNVSALFLVREWLKGQGRV" gene 3389196..3391331 /gene="yrfF" /locus_tag="b3398" /gene_synonym="ECK3385" /gene_synonym="igaA" /gene_synonym="JW3361" /gene_synonym="mucM" /gene_synonym="umoB" /db_xref="EcoGene:EG12927" CDS 3389196..3391331 /gene="yrfF" /locus_tag="b3398" /gene_synonym="ECK3385" /gene_synonym="igaA" /gene_synonym="JW3361" /gene_synonym="mucM" /gene_synonym="umoB" /function="putative factor; Not classified" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="putative RcsCDB-response attenuator, inner membrane protein" /protein_id="AAC76423.1" /db_xref="GI:1789801" /db_xref="ASAP:ABE-0011090" /db_xref="UniProtKB/Swiss-Prot:P45800" /db_xref="EcoGene:EG12927" /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRK LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR SYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE QINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR HRTRMMEIQAYYESCLNPQLITPSESLIE" gene 3391396..3392064 /gene="yrfG" /locus_tag="b3399" /gene_synonym="ECK3386" /gene_synonym="JW5865" /db_xref="EcoGene:EG12928" CDS 3391396..3392064 /gene="yrfG" /locus_tag="b3399" /gene_synonym="ECK3386" /gene_synonym="JW5865" /function="putative enzyme; Not classified" /note="putative phosphatase" /codon_start=1 /transl_table=11 /product="GMP/IMP nucleotidase" /protein_id="AAC76424.2" /db_xref="GI:87082259" /db_xref="ASAP:ABE-0011092" /db_xref="UniProtKB/Swiss-Prot:P64636" /db_xref="EcoGene:EG12928" /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI PSLM" gene 3392075..3392476 /gene="hslR" /locus_tag="b3400" /gene_synonym="ECK3387" /gene_synonym="JW3363" /gene_synonym="yrfH" /db_xref="EcoGene:EG12929" CDS 3392075..3392476 /gene="hslR" /locus_tag="b3400" /gene_synonym="ECK3387" /gene_synonym="JW3363" /gene_synonym="yrfH" /experiment="N-terminus verified by Edman degradation: PMID 9867837" /note="GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009266 - response to temperature stimulus" /codon_start=1 /transl_table=11 /product="ribosome-associated heat shock protein Hsp15" /protein_id="AAC76425.1" /db_xref="GI:1789803" /db_xref="ASAP:ABE-0011094" /db_xref="UniProtKB/Swiss-Prot:P0ACG8" /db_xref="EcoGene:EG12929" /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALAR KLNALTMPHPDRRPDKKERRDLLRFKHGDSE" gene 3392501..3393379 /gene="hslO" /locus_tag="b3401" /gene_synonym="ECK3388" /gene_synonym="JW5692" /gene_synonym="yrfI" /db_xref="EcoGene:EG12930" CDS 3392501..3393379 /gene="hslO" /locus_tag="b3401" /gene_synonym="ECK3388" /gene_synonym="JW5692" /gene_synonym="yrfI" /note="GO_process: GO:0006457 - protein folding" /codon_start=1 /transl_table=11 /product="heat shock protein Hsp33" /protein_id="AAC76426.2" /db_xref="GI:87082260" /db_xref="ASAP:ABE-0011096" /db_xref="UniProtKB/Swiss-Prot:P0A6Y5" /db_xref="EcoGene:EG12930" /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV TVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD IAEIRNNASPADPQVH" gene complement(3393442..3395166) /gene="yhgE" /locus_tag="b3402" /gene_synonym="ECK3389" /gene_synonym="JW3365" /db_xref="EcoGene:EG12931" CDS complement(3393442..3395166) /gene="yhgE" /locus_tag="b3402" /gene_synonym="ECK3389" /gene_synonym="JW3365" /function="putative transport; Not classified" /note="putative transport; GO_component: GO:0009274 - peptidoglycan-based cell wall" /codon_start=1 /transl_table=11 /product="DUF4153 family putative inner membrane protein" /protein_id="AAC76427.1" /db_xref="GI:1789805" /db_xref="ASAP:ABE-0011098" /db_xref="UniProtKB/Swiss-Prot:P45804" /db_xref="EcoGene:EG12931" /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGV PATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWD FGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGY FVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN TSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKV LADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGE RLNVNLNE" gene 3395545..3397167 /gene="pck" /locus_tag="b3403" /gene_synonym="ECK3390" /gene_synonym="JW3366" /gene_synonym="pckA" /db_xref="EcoGene:EG10688" CDS 3395545..3397167 /gene="pck" /locus_tag="b3403" /gene_synonym="ECK3390" /gene_synonym="JW3366" /gene_synonym="pckA" /EC_number="4.1.1.49" /function="enzyme; Central intermediary metabolism: Gluconeogenesis" /experiment="N-terminus verified by Edman degradation: PMID 1701430,9298646" /note="GO_process: GO:0006094 - gluconeogenesis" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase [ATP]" /protein_id="AAC76428.1" /db_xref="GI:1789807" /db_xref="ASAP:ABE-0011106" /db_xref="UniProtKB/Swiss-Prot:P22259" /db_xref="EcoGene:EG10688" /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL" gene complement(3397243..3398595) /gene="envZ" /locus_tag="b3404" /gene_synonym="cpr" /gene_synonym="ECK3391" /gene_synonym="JW3367" /gene_synonym="ompB" /gene_synonym="perA" /gene_synonym="tpo" /db_xref="EcoGene:EG10269" CDS complement(3397243..3398595) /gene="envZ" /locus_tag="b3404" /gene_synonym="cpr" /gene_synonym="ECK3391" /gene_synonym="JW3367" /gene_synonym="ompB" /gene_synonym="perA" /gene_synonym="tpo" /function="enzyme; Global regulatory functions" /note="protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_process: GO:0006464 - protein modification process" /codon_start=1 /transl_table=11 /product="sensory histidine kinase in two-component regulatory system with OmpR" /protein_id="AAC76429.1" /db_xref="GI:1789808" /db_xref="ASAP:ABE-0011108" /db_xref="UniProtKB/Swiss-Prot:P0AEJ4" /db_xref="EcoGene:EG10269" /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG " gene complement(3398592..3399311) /gene="ompR" /locus_tag="b3405" /gene_synonym="ECK3392" /gene_synonym="JW3368" /gene_synonym="kmt" /gene_synonym="ompB" /db_xref="EcoGene:EG10672" CDS complement(3398592..3399311) /gene="ompR" /locus_tag="b3405" /gene_synonym="ECK3392" /gene_synonym="JW3368" /gene_synonym="kmt" /gene_synonym="ompB" /function="regulator; Global regulatory functions" /note="response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016563 - transcription activator activity; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription" /codon_start=1 /transl_table=11 /product="response regulator in two-component regulatory system with EnvZ" /protein_id="AAC76430.1" /db_xref="GI:1789809" /db_xref="ASAP:ABE-0011110" /db_xref="UniProtKB/Swiss-Prot:P0AA16" /db_xref="EcoGene:EG10672" /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH PRYIQTVWGLGYVFVPDGSKA" gene 3399539..3400015 /gene="greB" /locus_tag="b3406" /gene_synonym="ECK3393" /gene_synonym="JW3369" /db_xref="EcoGene:EG11578" CDS 3399539..3400015 /gene="greB" /locus_tag="b3406" /gene_synonym="ECK3393"